Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:41:57 (2145717): wrapper (7.7.26015): starting
07:41:57 (2145717): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 07:41:57] Arguments: --nthreads 8
[2025-10-11 07:41:57] Threads: 8
[2025-10-11 07:41:57] Checking for CVMFS
[2025-10-11 07:41:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:41:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:41:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:41:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:41:58] 2.13.2.0 130249 116091 96064 151583 3 64 20626717 40960001 10322 16776704 1 77950965 99.734 51551386 31380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 07:41:58] CVMFS is ok
[2025-10-11 07:41:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:41:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:41:58] Further information can be found at the LHC@home message board.
[2025-10-11 07:41:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:41:58] Checking for apptainer binary...
[2025-10-11 07:41:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:41:58] Running /usr/bin/apptainer --version
[2025-10-11 07:41:59] apptainer version 1.4.3-1.el9
[2025-10-11 07:42:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:42:01] c-211-6.aglt2.org
[2025-10-11 07:42:01] apptainer works
[2025-10-11 07:42:02] Set ATHENA_PROC_NUMBER=8
[2025-10-11 07:42:02] Set ATHENA_CORE_NUMBER=8
[2025-10-11 07:42:02] Starting ATLAS job with PandaID=6837874218
[2025-10-11 07:42:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 12:39:36]  *** The last 200 lines of the pilot log: ***
[2025-10-11 12:39:36] 2025-10-11 16:38:58,153 | INFO     | time since job start (17768s) is within the limit (172800.0s)
[2025-10-11 12:39:36] 2025-10-11 16:38:58,995 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 12:39:36] 2025-10-11 16:38:59,013 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2399.9361458333333
[2025-10-11 12:39:36] 2025-10-11 16:38:59,040 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837874218/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 12:39:36] 2025-10-11 16:38:59,041 | INFO     | extracted standard info from prmon json
[2025-10-11 12:39:36] 2025-10-11 16:38:59,041 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 12:39:36] 2025-10-11 16:38:59,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 12:39:36] 2025-10-11 16:38:59,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 12:39:36] 2025-10-11 16:38:59,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 12:39:36] 2025-10-11 16:38:59,056 | INFO     | fitting pss+swap vs Time
[2025-10-11 12:39:36] 2025-10-11 16:38:59,057 | INFO     | sum of square deviations: 7486489118.602101
[2025-10-11 12:39:36] 2025-10-11 16:38:59,064 | INFO     | sum of deviations: 86892795170.00337
[2025-10-11 12:39:36] 2025-10-11 16:38:59,065 | INFO     | mean x: 1760191846.148789
[2025-10-11 12:39:36] 2025-10-11 16:38:59,065 | INFO     | mean y: 2457643.581314879
[2025-10-11 12:39:36] 2025-10-11 16:38:59,065 | INFO     | -- intersect: -20427411033.750805
[2025-10-11 12:39:36] 2025-10-11 16:38:59,065 | INFO     | intersect: -20427411033.750805
[2025-10-11 12:39:36] 2025-10-11 16:38:59,066 | INFO     | chi2: 3.209193772051882
[2025-10-11 12:39:36] 2025-10-11 16:38:59,066 | INFO     | sum of square deviations: 7104779661.221842
[2025-10-11 12:39:36] 2025-10-11 16:38:59,081 | INFO     | sum of deviations: 103030624714.15482
[2025-10-11 12:39:36] 2025-10-11 16:38:59,081 | INFO     | mean x: 1760191693.665493
[2025-10-11 12:39:36] 2025-10-11 16:38:59,081 | INFO     | mean y: 2463988.4647887326
[2025-10-11 12:39:36] 2025-10-11 16:38:59,081 | INFO     | -- intersect: -25523119979.30512
[2025-10-11 12:39:36] 2025-10-11 16:38:59,081 | INFO     | intersect: -25523119979.30512
[2025-10-11 12:39:36] 2025-10-11 16:38:59,082 | INFO     | chi2: 2.5209752327994304
[2025-10-11 12:39:36] 2025-10-11 16:38:59,082 | INFO     | current chi2=2.5209752327994304 (change=21.445216092776505 %)
[2025-10-11 12:39:36] 2025-10-11 16:38:59,082 | INFO     | right removable region: 283
[2025-10-11 12:39:36] 2025-10-11 16:38:59,083 | INFO     | sum of square deviations: 7104594646.887335
[2025-10-11 12:39:36] 2025-10-11 16:38:59,086 | INFO     | sum of deviations: 18058552745.767586
[2025-10-11 12:39:36] 2025-10-11 16:38:59,086 | INFO     | mean x: 1760191998.669014
[2025-10-11 12:39:36] 2025-10-11 16:38:59,086 | INFO     | mean y: 2485033.3485915493
[2025-10-11 12:39:36] 2025-10-11 16:38:59,086 | INFO     | -- intersect: -4471594295.662637
[2025-10-11 12:39:36] 2025-10-11 16:38:59,087 | INFO     | intersect: -4471594295.662637
[2025-10-11 12:39:36] 2025-10-11 16:38:59,087 | INFO     | chi2: 0.8596803822185269
[2025-10-11 12:39:36] 2025-10-11 16:38:59,087 | INFO     | current chi2=0.8596803822185269 (change=73.21195155913355 %)
[2025-10-11 12:39:36] 2025-10-11 16:38:59,088 | INFO     | sum of square deviations: 6735909724.931939
[2025-10-11 12:39:36] 2025-10-11 16:38:59,091 | INFO     | sum of deviations: 4285028556.709671
[2025-10-11 12:39:36] 2025-10-11 16:38:59,091 | INFO     | mean x: 1760192151.189964
[2025-10-11 12:39:36] 2025-10-11 16:38:59,091 | INFO     | mean y: 2490721.9677419355
[2025-10-11 12:39:36] 2025-10-11 16:38:59,091 | INFO     | -- intersect: -1117250180.3231409
[2025-10-11 12:39:36] 2025-10-11 16:38:59,092 | INFO     | intersect: -1117250180.3231409
[2025-10-11 12:39:36] 2025-10-11 16:38:59,094 | INFO     | chi2: 0.7840767675658138
[2025-10-11 12:39:36] 2025-10-11 16:38:59,094 | INFO     | current chi2=0.7840767675658138 (change=8.794386404120019 %)
[2025-10-11 12:39:36] 2025-10-11 16:38:59,094 | INFO     | left removable region: 20
[2025-10-11 12:39:36] 2025-10-11 16:38:59,095 | INFO     | sum of square deviations: 5642388933.908747
[2025-10-11 12:39:36] 2025-10-11 16:38:59,099 | INFO     | sum of deviations: 10080493942.140684
[2025-10-11 12:39:36] 2025-10-11 16:38:59,099 | INFO     | mean x: 1760192273.2395437
[2025-10-11 12:39:36] 2025-10-11 16:38:59,099 | INFO     | mean y: 2502824.5057034222
[2025-10-11 12:39:36] 2025-10-11 16:38:59,099 | INFO     | -- intersect: -3142194883.3678713
[2025-10-11 12:39:36] 2025-10-11 16:38:59,100 | INFO     | intersect: -3142194883.3678713
[2025-10-11 12:39:36] 2025-10-11 16:38:59,100 | INFO     | chi2: 0.051325803945047384
[2025-10-11 12:39:36] 2025-10-11 16:38:59,100 | INFO     | -- intersect: -3142194883.3678713
[2025-10-11 12:39:36] 2025-10-11 16:38:59,101 | INFO     | current memory leak: 1.79 B/s (using 263 data points, chi2=0.05)
[2025-10-11 12:39:36] 2025-10-11 16:38:59,101 | INFO     | could have reported an average CPU frequency of 2439 MHz (13 samples)
[2025-10-11 12:39:36] 2025-10-11 16:38:59,102 | INFO     | ..............................
[2025-10-11 12:39:36] 2025-10-11 16:38:59,102 | INFO     | . Timing measurements:
[2025-10-11 12:39:36] 2025-10-11 16:38:59,102 | INFO     | . get job = 0 s
[2025-10-11 12:39:36] 2025-10-11 16:38:59,102 | INFO     | . initial setup = 6 s
[2025-10-11 12:39:36] 2025-10-11 16:38:59,102 | INFO     | . payload setup = 26 s
[2025-10-11 12:39:36] 2025-10-11 16:38:59,102 | INFO     | . stage-in = 0 s
[2025-10-11 12:39:36] 2025-10-11 16:38:59,103 | INFO     | . payload execution = 17647 s
[2025-10-11 12:39:36] 2025-10-11 16:38:59,103 | INFO     | . stage-out = 6 s
[2025-10-11 12:39:36] 2025-10-11 16:38:59,103 | INFO     | . log creation = 1 s
[2025-10-11 12:39:36] 2025-10-11 16:38:59,103 | INFO     | ..............................
[2025-10-11 12:39:36] 2025-10-11 16:38:59,363 | INFO     | 
[2025-10-11 12:39:36] 2025-10-11 16:38:59,363 | INFO     | job summary report
[2025-10-11 12:39:36] 2025-10-11 16:38:59,364 | INFO     | --------------------------------------------------
[2025-10-11 12:39:36] 2025-10-11 16:38:59,364 | INFO     | PanDA job id: 6837874218
[2025-10-11 12:39:36] 2025-10-11 16:38:59,364 | INFO     | task id: 46676269
[2025-10-11 12:39:36] 2025-10-11 16:38:59,364 | INFO     | errors: (none)
[2025-10-11 12:39:36] 2025-10-11 16:38:59,364 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 12:39:36] 2025-10-11 16:38:59,364 | INFO     | pilot state: finished 
[2025-10-11 12:39:36] 2025-10-11 16:38:59,364 | INFO     | transexitcode: 0
[2025-10-11 12:39:36] 2025-10-11 16:38:59,364 | INFO     | exeerrorcode: 0
[2025-10-11 12:39:36] 2025-10-11 16:38:59,365 | INFO     | exeerrordiag: 
[2025-10-11 12:39:36] 2025-10-11 16:38:59,365 | INFO     | exitcode: 0
[2025-10-11 12:39:36] 2025-10-11 16:38:59,365 | INFO     | exitmsg: OK
[2025-10-11 12:39:36] 2025-10-11 16:38:59,365 | INFO     | cpuconsumptiontime: 63016 s
[2025-10-11 12:39:36] 2025-10-11 16:38:59,365 | INFO     | nevents: 400
[2025-10-11 12:39:36] 2025-10-11 16:38:59,365 | INFO     | neventsw: 0
[2025-10-11 12:39:36] 2025-10-11 16:38:59,365 | INFO     | pid: 2156638
[2025-10-11 12:39:36] 2025-10-11 16:38:59,366 | INFO     | pgrp: 2156638
[2025-10-11 12:39:36] 2025-10-11 16:38:59,366 | INFO     | corecount: 8
[2025-10-11 12:39:36] 2025-10-11 16:38:59,366 | INFO     | event service: False
[2025-10-11 12:39:36] 2025-10-11 16:38:59,366 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348941, 14: 2348941, 21: 2349231, 25: 2349387, 17679: 2381938, 17686: 2390936, 17687: 2390992, 17725: 2391186}
[2025-10-11 12:39:36] 2025-10-11 16:38:59,366 | INFO     | --------------------------------------------------
[2025-10-11 12:39:36] 2025-10-11 16:38:59,366 | INFO     | 
[2025-10-11 12:39:36] 2025-10-11 16:38:59,366 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 12:39:36] 2025-10-11 16:38:59,538 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,559 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,559 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,559 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,561 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 12:39:36] 2025-10-11 16:38:59,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,561 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 12:39:36] 2025-10-11 16:38:59,562 | INFO     | job 6837874218 has completed (purged errors)
[2025-10-11 12:39:36] 2025-10-11 16:38:59,566 | INFO     | overall cleanup function is called
[2025-10-11 12:39:36] 2025-10-11 16:39:00,286 | INFO     | PID=2149641 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 12:39:36] 2025-10-11 16:39:00,286 | INFO     | .. there are 8 such processes running
[2025-10-11 12:39:36] 2025-10-11 16:39:00,575 | INFO     | --- collectZombieJob: --- 10, [2156638]
[2025-10-11 12:39:36] 2025-10-11 16:39:00,576 | INFO     | zombie collector waiting for pid 2156638
[2025-10-11 12:39:36] 2025-10-11 16:39:00,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 12:39:36] 2025-10-11 16:39:00,577 | INFO     | collected zombie processes
[2025-10-11 12:39:36] 2025-10-11 16:39:00,577 | INFO     | will attempt to kill all subprocesses of pid=2156638
[2025-10-11 12:39:36] 2025-10-11 16:39:01,843 | INFO     | process IDs to be killed: [2156638] (in reverse order)
[2025-10-11 12:39:36] 2025-10-11 16:39:02,027 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 12:39:36] 2025-10-11 16:39:02,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 12:39:36] 2025-10-11 16:39:02,046 | INFO     | did not find any defunct processes belonging to 2156638
[2025-10-11 12:39:36] 2025-10-11 16:39:02,061 | INFO     | did not find any defunct processes belonging to 2156638
[2025-10-11 12:39:36] 2025-10-11 16:39:02,062 | INFO     | ready for new job
[2025-10-11 12:39:36] 2025-10-11 16:39:02,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 12:39:36] 2025-10-11 16:39:02,064 | INFO     | ***************************************
[2025-10-11 12:39:36] 2025-10-11 16:39:02,065 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 12:39:36] 2025-10-11 16:39:02,065 | INFO     | ***************************************
[2025-10-11 12:39:36] 2025-10-11 16:39:02,065 | INFO     | 
[2025-10-11 12:39:36] 2025-10-11 16:39:02,068 | INFO     | architecture information:
[2025-10-11 12:39:36] 2025-10-11 16:39:02,069 | INFO     | executing command: cat /etc/os-release
[2025-10-11 12:39:36] 2025-10-11 16:39:02,119 | INFO     | cat /etc/os-release:
[2025-10-11 12:39:36] NAME="CentOS Linux"
[2025-10-11 12:39:36] VERSION="7 (Core)"
[2025-10-11 12:39:36] ID="centos"
[2025-10-11 12:39:36] ID_LIKE="rhel fedora"
[2025-10-11 12:39:36] VERSION_ID="7"
[2025-10-11 12:39:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 12:39:36] ANSI_COLOR="0;31"
[2025-10-11 12:39:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 12:39:36] HOME_URL="https://www.centos.org/"
[2025-10-11 12:39:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 12:39:36] 
[2025-10-11 12:39:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 12:39:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 12:39:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 12:39:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 12:39:36] 
[2025-10-11 12:39:36] 2025-10-11 16:39:02,120 | INFO     | ***************************************
[2025-10-11 12:39:36] 2025-10-11 16:39:02,623 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 12:39:36] 2025-10-11 16:39:02,688 | INFO     | sufficient remaining disk space (63826821120 B)
[2025-10-11 12:39:36] 2025-10-11 16:39:02,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 12:39:36] 2025-10-11 16:39:02,688 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 12:39:36] 2025-10-11 16:39:02,689 | INFO     | update_server=False
[2025-10-11 12:39:36] 2025-10-11 16:39:02,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 12:39:36] 2025-10-11 16:39:02,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:39:36] 2025-10-11 16:39:02,767 | INFO     | aborting loop
[2025-10-11 12:39:36] 2025-10-11 16:39:02,846 | INFO     | all data control threads have been joined
[2025-10-11 12:39:36] 2025-10-11 16:39:03,045 | INFO     | all payload control threads have been joined
[2025-10-11 12:39:36] 2025-10-11 16:39:03,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 12:39:36] 2025-10-11 16:39:03,557 | INFO     | all job control threads have been joined
[2025-10-11 12:39:36] 2025-10-11 16:39:03,694 | INFO     | [job] retrieve thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:03,771 | INFO     | [job] job monitor thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:03,852 | INFO     | [data] control thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:03,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 12:39:36] 2025-10-11 16:39:03,943 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:03,944 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:04,052 | INFO     | [payload] control thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:04,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 12:39:36] 2025-10-11 16:39:04,559 | INFO     | [payload] validate_post thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:04,563 | INFO     | [job] control thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:04,839 | INFO     | [payload] failed_post thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:05,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:05,048 | INFO     | [job] validate thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:05,048 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:05,055 | INFO     | [data] copytool_in thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:05,407 | INFO     | [job] queue monitor thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:05,913 | INFO     | [data] copytool_out thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:07,450 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 12:39:36] 2025-10-11 16:39:19,943 | INFO     | [monitor] cgroup control has ended
[2025-10-11 12:39:36] 2025-10-11 16:39:21,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140132119193408)>', '<ExcThread(monitor, started 140131310737152)>']
[2025-10-11 12:39:36] 2025-10-11 16:39:26,373 | INFO     | all workflow threads have been joined
[2025-10-11 12:39:36] 2025-10-11 16:39:26,373 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 12:39:36] 2025-10-11 16:39:26,374 | INFO     | traces error code: 0
[2025-10-11 12:39:36] 2025-10-11 16:39:26,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 12:39:36] 2025-10-11 16:39:33,404 | INFO     | PID=2149641 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 12:39:36] 2025-10-11 16:39:33,405 | INFO     | .. there are 8 such processes running
[2025-10-11 12:39:36] 2025-10-11 16:39:33,412 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 12:39:36] 2025-10-11 16:39:33,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 12:39:36] 2025-10-11 16:39:33,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 12:39:36] 2025-10-11 16:39:33,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 12:39:36] 2025-10-11 16:39:33,417 | INFO     | [monitor] control thread has ended
[2025-10-11 12:39:36] 2025-10-11 16:39:34,649 [wrapper] ==== pilot stdout END ====
[2025-10-11 12:39:36] 2025-10-11 16:39:34,682 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 12:39:36] 2025-10-11 16:39:34,709 [wrapper] pilotpid: 2149641
[2025-10-11 12:39:36] 2025-10-11 16:39:34,726 [wrapper] Pilot exit status: 0
[2025-10-11 12:39:36] 2025-10-11 16:39:34,864 [wrapper] pandaids: 6837874218
[2025-10-11 12:39:36] 2025-10-11 16:39:35,041 [wrapper] cleanup supervisor_pilot 2538481 2149642
[2025-10-11 12:39:36] 2025-10-11 16:39:35,045 [wrapper] Test setup, not cleaning
[2025-10-11 12:39:36] 2025-10-11 16:39:35,053 [wrapper] apfmon messages muted
[2025-10-11 12:39:36] 2025-10-11 16:39:35,070 [wrapper] ==== wrapper stdout END ====
[2025-10-11 12:39:36] 2025-10-11 16:39:35,095 [wrapper] ==== wrapper stderr END ====
[2025-10-11 12:39:36]  *** Error codes and diagnostics ***
[2025-10-11 12:39:36]     "exeErrorCode": 0,
[2025-10-11 12:39:36]     "exeErrorDiag": "",
[2025-10-11 12:39:36]     "pilotErrorCode": 0,
[2025-10-11 12:39:36]     "pilotErrorDiag": "",
[2025-10-11 12:39:36]  *** Listing of results directory ***
[2025-10-11 12:39:36] total 416300
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 18:56 pilot3.tar.gz
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 19:10 queuedata.json
[2025-10-11 12:39:36] -rwx------. 1 boincer umatlas     36292 Oct 10 19:12 runpilot2-wrapper.sh
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas       100 Oct 11 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 12:39:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 07:41 run_atlas
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas       105 Oct 11 07:41 job.xml
[2025-10-11 12:39:36] -rw-r--r--. 2 boincer umatlas 221008478 Oct 11 07:41 EVNT.46676267._001888.pool.root.1
[2025-10-11 12:39:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 07:41 shared
[2025-10-11 12:39:36] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 07:41 input.tar.gz
[2025-10-11 12:39:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 07:41 start_atlas.sh
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas         0 Oct 11 07:41 boinc_lockfile
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 07:42 pandaJob.out
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas    975509 Oct 11 07:42 agis_schedconf.cvmfs.json
[2025-10-11 12:39:36] drwx------. 5 boincer umatlas      4096 Oct 11 07:42 pilot3
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas 195586815 Oct 11 12:36 HITS.46676269._046740.pool.root.1
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas       531 Oct 11 12:36 boinc_task_state.xml
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas      1067 Oct 11 12:38 memory_monitor_summary.json
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas   1560580 Oct 11 12:38 agis_ddmendpoints.agis.ALL.json
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas    501793 Oct 11 12:38 log.46676269._046740.job.log.tgz.1
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas      6614 Oct 11 12:38 init_data.xml
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas      7848 Oct 11 12:38 heartbeat.json
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas        28 Oct 11 12:39 wrapper_checkpoint.txt
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 12:39 boinc_mmap_file
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas        95 Oct 11 12:39 pilot_heartbeat.json
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas       822 Oct 11 12:39 pilotlog.txt
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas   2395661 Oct 11 12:39 log.46676269._046740.job.log.1
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas       357 Oct 11 12:39 output.list
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas       620 Oct 11 12:39 runtime_log
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas   2918400 Oct 11 12:39 result.tar.gz
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas       660 Oct 11 12:39 SI0MDmGTbR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0feNDm5CAqWo.diag
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 12:39 runtime_log.err
[2025-10-11 12:39:36] -rw-r--r--. 1 boincer umatlas     21312 Oct 11 12:39 stderr.txt
[2025-10-11 12:39:36] HITS file was successfully produced:
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas 195586815 Oct 11 12:36 shared/HITS.pool.root.1
[2025-10-11 12:39:36]  *** Contents of shared directory: ***
[2025-10-11 12:39:36] total 410268
[2025-10-11 12:39:36] -rw-r--r--. 2 boincer umatlas 221008478 Oct 11 07:41 ATLAS.root_0
[2025-10-11 12:39:36] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 07:41 input.tar.gz
[2025-10-11 12:39:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 07:41 start_atlas.sh
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas 195586815 Oct 11 12:36 HITS.pool.root.1
[2025-10-11 12:39:36] -rw-------. 1 boincer umatlas   2918400 Oct 11 12:39 result.tar.gz
12:39:37 (2145717): run_atlas exited; CPU time 63548.282772
12:39:37 (2145717): called boinc_finish(0)

</stderr_txt>
]]>

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