Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:16 (1310459): wrapper (7.7.26015): starting
00:05:16 (1310459): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 00:05:16] Arguments: --nthreads 12
[2025-10-11 00:05:16] Threads: 12
[2025-10-11 00:05:16] Checking for CVMFS
[2025-10-11 00:05:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:05:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:05:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:05:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:05:17] 2.13.2.0 129360 115331 159864 151571 1 434 33609275 39288833 10762 16776704 0 89280565 99.566 103830534 34631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:05:17] CVMFS is ok
[2025-10-11 00:05:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:05:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:05:17] Further information can be found at the LHC@home message board.
[2025-10-11 00:05:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:05:17] Checking for apptainer binary...
[2025-10-11 00:05:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:05:17] Running /usr/bin/apptainer --version
[2025-10-11 00:05:17] apptainer version 1.4.3-1.el9
[2025-10-11 00:05:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:05:17] c-210-9.aglt2.org
[2025-10-11 00:05:17] apptainer works
[2025-10-11 00:05:17] Set ATHENA_PROC_NUMBER=12
[2025-10-11 00:05:17] Set ATHENA_CORE_NUMBER=12
[2025-10-11 00:05:17] Starting ATLAS job with PandaID=6837932753
[2025-10-11 00:05:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 09:10:43]  *** The last 200 lines of the pilot log: ***
[2025-10-11 09:10:43] 2025-10-11 13:09:31,173 | INFO     | time since job start (32642s) is within the limit (172800.0s)
[2025-10-11 09:10:43] 2025-10-11 13:09:31,395 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 09:10:43] 2025-10-11 13:09:31,444 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.90305
[2025-10-11 09:10:43] 2025-10-11 13:09:31,484 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837932753/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 09:10:43] 2025-10-11 13:09:31,485 | INFO     | extracted standard info from prmon json
[2025-10-11 09:10:43] 2025-10-11 13:09:31,485 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 09:10:43] 2025-10-11 13:09:31,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 09:10:43] 2025-10-11 13:09:31,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 09:10:43] 2025-10-11 13:09:31,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 09:10:43] 2025-10-11 13:09:31,555 | INFO     | fitting pss+swap vs Time
[2025-10-11 09:10:43] 2025-10-11 13:09:31,556 | INFO     | sum of square deviations: 47218702071.587875
[2025-10-11 09:10:43] 2025-10-11 13:09:31,589 | INFO     | sum of deviations: 239559602055.37457
[2025-10-11 09:10:43] 2025-10-11 13:09:31,589 | INFO     | mean x: 1760171814.7116106
[2025-10-11 09:10:43] 2025-10-11 13:09:31,589 | INFO     | mean y: 2649494.7621722845
[2025-10-11 09:10:43] 2025-10-11 13:09:31,589 | INFO     | -- intersect: -8927415097.909512
[2025-10-11 09:10:43] 2025-10-11 13:09:31,589 | INFO     | intersect: -8927415097.909512
[2025-10-11 09:10:43] 2025-10-11 13:09:31,590 | INFO     | chi2: 2.9905350376393245
[2025-10-11 09:10:43] 2025-10-11 13:09:31,591 | INFO     | sum of square deviations: 45904982116.23009
[2025-10-11 09:10:43] 2025-10-11 13:09:31,605 | INFO     | sum of deviations: 272410316424.17197
[2025-10-11 09:10:43] 2025-10-11 13:09:31,605 | INFO     | mean x: 1760171662.2249527
[2025-10-11 09:10:43] 2025-10-11 13:09:31,606 | INFO     | mean y: 2653275.8809073726
[2025-10-11 09:10:43] 2025-10-11 13:09:31,606 | INFO     | -- intersect: -10442594655.01923
[2025-10-11 09:10:43] 2025-10-11 13:09:31,606 | INFO     | intersect: -10442594655.01923
[2025-10-11 09:10:43] 2025-10-11 13:09:31,607 | INFO     | chi2: 2.284598469335794
[2025-10-11 09:10:43] 2025-10-11 13:09:31,607 | INFO     | current chi2=2.284598469335794 (change=23.605694613790053 %)
[2025-10-11 09:10:43] 2025-10-11 13:09:31,607 | INFO     | right removable region: 528
[2025-10-11 09:10:43] 2025-10-11 13:09:31,608 | INFO     | sum of square deviations: 45904456535.32326
[2025-10-11 09:10:43] 2025-10-11 13:09:31,615 | INFO     | sum of deviations: 133947594106.46852
[2025-10-11 09:10:43] 2025-10-11 13:09:31,615 | INFO     | mean x: 1760171967.2287335
[2025-10-11 09:10:43] 2025-10-11 13:09:31,616 | INFO     | mean y: 2661714.86389414
[2025-10-11 09:10:43] 2025-10-11 13:09:31,616 | INFO     | -- intersect: -5133458348.827832
[2025-10-11 09:10:43] 2025-10-11 13:09:31,616 | INFO     | intersect: -5133458348.827832
[2025-10-11 09:10:43] 2025-10-11 13:09:31,617 | INFO     | chi2: 1.3646436608568955
[2025-10-11 09:10:43] 2025-10-11 13:09:31,617 | INFO     | current chi2=1.3646436608568955 (change=54.367909297791705 %)
[2025-10-11 09:10:43] 2025-10-11 13:09:31,618 | INFO     | sum of square deviations: 44614751810.25
[2025-10-11 09:10:43] 2025-10-11 13:09:31,626 | INFO     | sum of deviations: 102504426448.99979
[2025-10-11 09:10:43] 2025-10-11 13:09:31,626 | INFO     | mean x: 1760172119.75
[2025-10-11 09:10:43] 2025-10-11 13:09:31,626 | INFO     | mean y: 2665433.3740458013
[2025-10-11 09:10:43] 2025-10-11 13:09:31,626 | INFO     | -- intersect: -4041410265.037486
[2025-10-11 09:10:43] 2025-10-11 13:09:31,626 | INFO     | intersect: -4041410265.037486
[2025-10-11 09:10:43] 2025-10-11 13:09:31,627 | INFO     | chi2: 1.2739188739279537
[2025-10-11 09:10:43] 2025-10-11 13:09:31,627 | INFO     | current chi2=1.2739188739279537 (change=6.648240088696367 %)
[2025-10-11 09:10:43] 2025-10-11 13:09:31,627 | INFO     | left removable region: 20
[2025-10-11 09:10:43] 2025-10-11 13:09:31,628 | INFO     | sum of square deviations: 40651547188.181114
[2025-10-11 09:10:43] 2025-10-11 13:09:31,703 | INFO     | sum of deviations: 56424842074.09448
[2025-10-11 09:10:43] 2025-10-11 13:09:31,704 | INFO     | mean x: 1760172241.7834647
[2025-10-11 09:10:43] 2025-10-11 13:09:31,704 | INFO     | mean y: 2679238.5826771655
[2025-10-11 09:10:43] 2025-10-11 13:09:31,704 | INFO     | -- intersect: -2440461247.708876
[2025-10-11 09:10:43] 2025-10-11 13:09:31,704 | INFO     | intersect: -2440461247.708876
[2025-10-11 09:10:43] 2025-10-11 13:09:31,705 | INFO     | chi2: 0.2278503812183174
[2025-10-11 09:10:43] 2025-10-11 13:09:31,705 | INFO     | -- intersect: -2440461247.708876
[2025-10-11 09:10:43] 2025-10-11 13:09:31,705 | INFO     | current memory leak: 1.39 B/s (using 508 data points, chi2=0.23)
[2025-10-11 09:10:43] 2025-10-11 13:09:31,706 | INFO     | could have reported an average CPU frequency of 2599 MHz (21 samples)
[2025-10-11 09:10:43] 2025-10-11 13:09:31,706 | INFO     | ..............................
[2025-10-11 09:10:43] 2025-10-11 13:09:31,706 | INFO     | . Timing measurements:
[2025-10-11 09:10:43] 2025-10-11 13:09:31,706 | INFO     | . get job = 0 s
[2025-10-11 09:10:43] 2025-10-11 13:09:31,707 | INFO     | . initial setup = 2 s
[2025-10-11 09:10:43] 2025-10-11 13:09:31,707 | INFO     | . payload setup = 5 s
[2025-10-11 09:10:43] 2025-10-11 13:09:31,723 | INFO     | . stage-in = 0 s
[2025-10-11 09:10:43] 2025-10-11 13:09:31,723 | INFO     | . payload execution = 32557 s
[2025-10-11 09:10:43] 2025-10-11 13:09:31,723 | INFO     | . stage-out = 8 s
[2025-10-11 09:10:43] 2025-10-11 13:09:31,723 | INFO     | . log creation = 1 s
[2025-10-11 09:10:43] 2025-10-11 13:09:31,724 | INFO     | ..............................
[2025-10-11 09:10:43] 2025-10-11 13:09:33,107 | INFO     | 
[2025-10-11 09:10:43] 2025-10-11 13:09:33,108 | INFO     | job summary report
[2025-10-11 09:10:43] 2025-10-11 13:09:33,108 | INFO     | --------------------------------------------------
[2025-10-11 09:10:43] 2025-10-11 13:09:33,108 | INFO     | PanDA job id: 6837932753
[2025-10-11 09:10:43] 2025-10-11 13:09:33,108 | INFO     | task id: 46676269
[2025-10-11 09:10:43] 2025-10-11 13:09:33,108 | INFO     | errors: (none)
[2025-10-11 09:10:43] 2025-10-11 13:09:33,108 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | pilot state: finished 
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | transexitcode: 0
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | exeerrorcode: 0
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | exeerrordiag: 
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | exitcode: 0
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | exitmsg: OK
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | cpuconsumptiontime: 51247 s
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | nevents: 400
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | neventsw: 0
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | pid: 1325307
[2025-10-11 09:10:43] 2025-10-11 13:09:33,109 | INFO     | pgrp: 1325307
[2025-10-11 09:10:43] 2025-10-11 13:09:33,110 | INFO     | corecount: 12
[2025-10-11 09:10:43] 2025-10-11 13:09:33,110 | INFO     | event service: False
[2025-10-11 09:10:43] 2025-10-11 13:09:33,110 | INFO     | sizes: {0: 2348029, 1: 2348885, 6: 2349147, 12: 2349175, 32567: 2387785, 32568: 2387784, 32578: 2396994, 32581: 2397050, 32628: 2397244}
[2025-10-11 09:10:43] 2025-10-11 13:09:33,110 | INFO     | --------------------------------------------------
[2025-10-11 09:10:43] 2025-10-11 13:09:33,110 | INFO     | 
[2025-10-11 09:10:43] 2025-10-11 13:09:33,110 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 09:10:43] 2025-10-11 13:09:33,418 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,419 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,419 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 09:10:43] 2025-10-11 13:09:33,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 09:10:43] 2025-10-11 13:09:33,422 | INFO     | job 6837932753 has completed (purged errors)
[2025-10-11 09:10:43] 2025-10-11 13:09:33,422 | INFO     | overall cleanup function is called
[2025-10-11 09:10:43] 2025-10-11 13:09:34,455 | INFO     | --- collectZombieJob: --- 10, [1325307]
[2025-10-11 09:10:43] 2025-10-11 13:09:34,455 | INFO     | zombie collector waiting for pid 1325307
[2025-10-11 09:10:43] 2025-10-11 13:09:34,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 09:10:43] 2025-10-11 13:09:34,456 | INFO     | collected zombie processes
[2025-10-11 09:10:43] 2025-10-11 13:09:34,456 | INFO     | will attempt to kill all subprocesses of pid=1325307
[2025-10-11 09:10:43] 2025-10-11 13:09:36,183 | INFO     | PID=1318745 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:10:43] 2025-10-11 13:09:36,184 | INFO     | .. there are 13 such processes running
[2025-10-11 09:10:43] 2025-10-11 13:09:38,494 | INFO     | process IDs to be killed: [1325307] (in reverse order)
[2025-10-11 09:10:43] 2025-10-11 13:09:39,130 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 09:10:43] 2025-10-11 13:09:39,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 09:10:43] 2025-10-11 13:09:39,209 | INFO     | did not find any defunct processes belonging to 1325307
[2025-10-11 09:10:43] 2025-10-11 13:09:39,331 | INFO     | did not find any defunct processes belonging to 1325307
[2025-10-11 09:10:43] 2025-10-11 13:09:39,332 | INFO     | ready for new job
[2025-10-11 09:10:43] 2025-10-11 13:09:39,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 09:10:43] 2025-10-11 13:09:39,382 | INFO     | ***************************************
[2025-10-11 09:10:43] 2025-10-11 13:09:39,382 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 09:10:43] 2025-10-11 13:09:39,382 | INFO     | ***************************************
[2025-10-11 09:10:43] 2025-10-11 13:09:39,382 | INFO     | 
[2025-10-11 09:10:43] 2025-10-11 13:09:39,384 | INFO     | architecture information:
[2025-10-11 09:10:43] 2025-10-11 13:09:39,436 | INFO     | executing command: cat /etc/os-release
[2025-10-11 09:10:43] 2025-10-11 13:09:39,694 | INFO     | cat /etc/os-release:
[2025-10-11 09:10:43] NAME="CentOS Linux"
[2025-10-11 09:10:43] VERSION="7 (Core)"
[2025-10-11 09:10:43] ID="centos"
[2025-10-11 09:10:43] ID_LIKE="rhel fedora"
[2025-10-11 09:10:43] VERSION_ID="7"
[2025-10-11 09:10:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 09:10:43] ANSI_COLOR="0;31"
[2025-10-11 09:10:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 09:10:43] HOME_URL="https://www.centos.org/"
[2025-10-11 09:10:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 09:10:43] 
[2025-10-11 09:10:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 09:10:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 09:10:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 09:10:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 09:10:43] 
[2025-10-11 09:10:43] 2025-10-11 13:09:39,695 | INFO     | ***************************************
[2025-10-11 09:10:43] 2025-10-11 13:09:40,198 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 09:10:43] 2025-10-11 13:09:40,467 | INFO     | sufficient remaining disk space (52629078016 B)
[2025-10-11 09:10:43] 2025-10-11 13:09:40,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 09:10:43] 2025-10-11 13:09:40,468 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 09:10:43] 2025-10-11 13:09:40,469 | INFO     | update_server=False
[2025-10-11 09:10:43] 2025-10-11 13:09:40,469 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 09:10:43] 2025-10-11 13:09:40,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:10:43] 2025-10-11 13:09:40,500 | INFO     | aborting loop
[2025-10-11 09:10:43] 2025-10-11 13:09:40,515 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 09:10:43] 2025-10-11 13:09:40,898 | INFO     | all data control threads have been joined
[2025-10-11 09:10:43] 2025-10-11 13:09:41,475 | INFO     | [job] retrieve thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:41,506 | INFO     | [job] job monitor thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:41,896 | INFO     | all payload control threads have been joined
[2025-10-11 09:10:43] 2025-10-11 13:09:41,904 | INFO     | [data] control thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:42,036 | INFO     | all job control threads have been joined
[2025-10-11 09:10:43] 2025-10-11 13:09:42,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 09:10:43] 2025-10-11 13:09:42,272 | INFO     | [payload] failed_post thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:42,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 09:10:43] 2025-10-11 13:09:42,537 | INFO     | [data] copytool_out thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:42,619 | INFO     | [job] validate thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:42,626 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:42,637 | INFO     | [data] copytool_in thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:42,771 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:42,901 | INFO     | [payload] validate_post thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:42,907 | INFO     | [payload] control thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:42,947 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:42,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:43,042 | INFO     | [job] control thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:43,131 | INFO     | [job] queue monitor thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:09:46,419 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 09:10:43] 2025-10-11 13:10:10,796 | INFO     | PID=1318745 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 09:10:43] 2025-10-11 13:10:10,796 | INFO     | .. there are 13 such processes running
[2025-10-11 09:10:43] 2025-10-11 13:10:10,797 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 09:10:43] 2025-10-11 13:10:10,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 09:10:43] 2025-10-11 13:10:10,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 09:10:43] 2025-10-11 13:10:35,267 | INFO     | [monitor] cgroup control has ended
[2025-10-11 09:10:43] 2025-10-11 13:10:35,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140630869698368)>', '<ExcThread(monitor, started 140630231602944)>']
[2025-10-11 09:10:43] 2025-10-11 13:10:35,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 09:10:43] 2025-10-11 13:10:35,980 | INFO     | [monitor] control thread has ended
[2025-10-11 09:10:43] 2025-10-11 13:10:40,774 | INFO     | all workflow threads have been joined
[2025-10-11 09:10:43] 2025-10-11 13:10:40,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 09:10:43] 2025-10-11 13:10:40,775 | INFO     | traces error code: 0
[2025-10-11 09:10:43] 2025-10-11 13:10:40,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 09:10:43] 2025-10-11 13:10:41,142 [wrapper] ==== pilot stdout END ====
[2025-10-11 09:10:43] 2025-10-11 13:10:41,149 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 09:10:43] 2025-10-11 13:10:41,153 [wrapper] pilotpid: 1318745
[2025-10-11 09:10:43] 2025-10-11 13:10:41,199 [wrapper] Pilot exit status: 0
[2025-10-11 09:10:43] 2025-10-11 13:10:41,357 [wrapper] pandaids: 6837932753
[2025-10-11 09:10:43] 2025-10-11 13:10:41,848 [wrapper] cleanup supervisor_pilot 2258857 1318746
[2025-10-11 09:10:43] 2025-10-11 13:10:41,871 [wrapper] Test setup, not cleaning
[2025-10-11 09:10:43] 2025-10-11 13:10:42,084 [wrapper] apfmon messages muted
[2025-10-11 09:10:43] 2025-10-11 13:10:42,132 [wrapper] ==== wrapper stdout END ====
[2025-10-11 09:10:43] 2025-10-11 13:10:42,172 [wrapper] ==== wrapper stderr END ====
[2025-10-11 09:10:43]  *** Error codes and diagnostics ***
[2025-10-11 09:10:43]     "exeErrorCode": 0,
[2025-10-11 09:10:43]     "exeErrorDiag": "",
[2025-10-11 09:10:43]     "pilotErrorCode": 0,
[2025-10-11 09:10:43]     "pilotErrorDiag": "",
[2025-10-11 09:10:43]  *** Listing of results directory ***
[2025-10-11 09:10:43] total 414644
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 22:04 pilot3.tar.gz
[2025-10-11 09:10:43] -rwx------. 1 boincer umatlas     36292 Oct 10 22:04 runpilot2-wrapper.sh
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 22:04 queuedata.json
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 09:10:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:05 run_atlas
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:05 job.xml
[2025-10-11 09:10:43] -rw-r--r--. 2 boincer umatlas 218955576 Oct 11 00:05 EVNT.46676267._001980.pool.root.1
[2025-10-11 09:10:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:05 start_atlas.sh
[2025-10-11 09:10:43] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:05 shared
[2025-10-11 09:10:43] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 00:05 input.tar.gz
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:05 boinc_lockfile
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:05 pandaJob.out
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas    975509 Oct 11 00:05 agis_schedconf.cvmfs.json
[2025-10-11 09:10:43] drwx------. 5 boincer umatlas      4096 Oct 11 00:05 pilot3
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas      6658 Oct 11 08:58 init_data.xml
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas 192734465 Oct 11 09:07 HITS.46676269._049099.pool.root.1
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas       530 Oct 11 09:07 boinc_task_state.xml
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas      1042 Oct 11 09:08 memory_monitor_summary.json
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas   1560580 Oct 11 09:08 agis_ddmendpoints.agis.ALL.json
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas    723146 Oct 11 09:08 log.46676269._049099.job.log.tgz.1
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas      7823 Oct 11 09:09 heartbeat.json
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas        95 Oct 11 09:09 pilot_heartbeat.json
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 09:10 boinc_mmap_file
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas        27 Oct 11 09:10 wrapper_checkpoint.txt
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas      4824 Oct 11 09:10 pilotlog.txt
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas   3776606 Oct 11 09:10 log.46676269._049099.job.log.1
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas       357 Oct 11 09:10 output.list
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas       620 Oct 11 09:10 runtime_log
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas   4515840 Oct 11 09:10 result.tar.gz
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas      8701 Oct 11 09:10 runtime_log.err
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas       656 Oct 11 09:10 dhpKDmf9dR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmX6eNDm7qoSan.diag
[2025-10-11 09:10:43] -rw-r--r--. 1 boincer umatlas     20976 Oct 11 09:10 stderr.txt
[2025-10-11 09:10:43] HITS file was successfully produced:
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas 192734465 Oct 11 09:07 shared/HITS.pool.root.1
[2025-10-11 09:10:43]  *** Contents of shared directory: ***
[2025-10-11 09:10:43] total 407040
[2025-10-11 09:10:43] -rw-r--r--. 2 boincer umatlas 218955576 Oct 11 00:05 ATLAS.root_0
[2025-10-11 09:10:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:05 start_atlas.sh
[2025-10-11 09:10:43] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 00:05 input.tar.gz
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas 192734465 Oct 11 09:07 HITS.pool.root.1
[2025-10-11 09:10:43] -rw-------. 1 boincer umatlas   4515840 Oct 11 09:10 result.tar.gz
09:11:06 (1310459): run_atlas exited; CPU time 52041.264881
09:11:06 (1310459): called boinc_finish(0)

</stderr_txt>
]]>

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