Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:58:27 (1091935): wrapper (7.7.26015): starting
12:58:27 (1091935): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 12:58:27] Arguments: --nthreads 12
[2025-10-11 12:58:27] Threads: 12
[2025-10-11 12:58:27] Checking for CVMFS
[2025-10-11 12:58:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 12:58:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 12:58:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 12:58:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 12:58:28] 2.13.2.0 133490 114805 149444 151590 2 64 34733425 39288833 7925 16776704 0 65287769 99.728 42364606 34699 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 12:58:28] CVMFS is ok
[2025-10-11 12:58:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 12:58:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 12:58:28] Further information can be found at the LHC@home message board.
[2025-10-11 12:58:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 12:58:28] Checking for apptainer binary...
[2025-10-11 12:58:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 12:58:28] Running /usr/bin/apptainer --version
[2025-10-11 12:58:29] apptainer version 1.4.3-1.el9
[2025-10-11 12:58:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 12:58:30] c-210-28.aglt2.org
[2025-10-11 12:58:30] apptainer works
[2025-10-11 12:58:30] Set ATHENA_PROC_NUMBER=12
[2025-10-11 12:58:30] Set ATHENA_CORE_NUMBER=12
[2025-10-11 12:58:30] Starting ATLAS job with PandaID=6837932487
[2025-10-11 12:58:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:29:52]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:29:52] 2025-10-12 01:28:29,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 21:29:52] 2025-10-12 01:28:29,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:29:52] 2025-10-12 01:28:29,478 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:29:52] 2025-10-12 01:28:29,479 | INFO     | sum of square deviations: 38295492915.08465
[2025-10-11 21:29:52] 2025-10-12 01:28:29,576 | INFO     | sum of deviations: 121625796007.27689
[2025-10-11 21:29:52] 2025-10-12 01:28:29,576 | INFO     | mean x: 1760217265.759036
[2025-10-11 21:29:52] 2025-10-12 01:28:29,576 | INFO     | mean y: 2680661.493975904
[2025-10-11 21:29:52] 2025-10-12 01:28:29,576 | INFO     | -- intersect: -5587737682.732786
[2025-10-11 21:29:52] 2025-10-12 01:28:29,576 | INFO     | intersect: -5587737682.732786
[2025-10-11 21:29:52] 2025-10-12 01:28:29,578 | INFO     | chi2: 2.7828241642259792
[2025-10-11 21:29:52] 2025-10-12 01:28:29,580 | INFO     | sum of square deviations: 37153639552.657196
[2025-10-11 21:29:52] 2025-10-12 01:28:29,623 | INFO     | sum of deviations: 153163615373.3509
[2025-10-11 21:29:52] 2025-10-12 01:28:29,624 | INFO     | mean x: 1760217113.2677486
[2025-10-11 21:29:52] 2025-10-12 01:28:29,624 | INFO     | mean y: 2684836.2170385397
[2025-10-11 21:29:52] 2025-10-12 01:28:29,624 | INFO     | -- intersect: -7253702967.406626
[2025-10-11 21:29:52] 2025-10-12 01:28:29,624 | INFO     | intersect: -7253702967.406626
[2025-10-11 21:29:52] 2025-10-12 01:28:29,625 | INFO     | chi2: 2.084996867008518
[2025-10-11 21:29:52] 2025-10-12 01:28:29,625 | INFO     | current chi2=2.084996867008518 (change=25.07622674074186 %)
[2025-10-11 21:29:52] 2025-10-12 01:28:29,637 | INFO     | sum of square deviations: 36034656947.752335
[2025-10-11 21:29:52] 2025-10-12 01:28:29,691 | INFO     | sum of deviations: 151172840378.28503
[2025-10-11 21:29:52] 2025-10-12 01:28:29,691 | INFO     | mean x: 1760216960.772541
[2025-10-11 21:29:52] 2025-10-12 01:28:29,692 | INFO     | mean y: 2684565.6331967213
[2025-10-11 21:29:52] 2025-10-12 01:28:29,692 | INFO     | -- intersect: -7381789720.547435
[2025-10-11 21:29:52] 2025-10-12 01:28:29,692 | INFO     | intersect: -7381789720.547435
[2025-10-11 21:29:52] 2025-10-12 01:28:29,743 | INFO     | chi2: 2.0850553690805644
[2025-10-11 21:29:52] 2025-10-12 01:28:29,744 | INFO     | current chi2=2.0850553690805644 (change=-0.002805858990580184 %)
[2025-10-11 21:29:52] 2025-10-12 01:28:29,744 | INFO     | right removable region: 487
[2025-10-11 21:29:52] 2025-10-12 01:28:29,744 | INFO     | sum of square deviations: 37153317469.57795
[2025-10-11 21:29:52] 2025-10-12 01:28:29,815 | INFO     | sum of deviations: 8016562959.350918
[2025-10-11 21:29:52] 2025-10-12 01:28:29,815 | INFO     | mean x: 1760217418.2718053
[2025-10-11 21:29:52] 2025-10-12 01:28:29,815 | INFO     | mean y: 2695784.5720081134
[2025-10-11 21:29:52] 2025-10-12 01:28:29,816 | INFO     | -- intersect: -377105932.11927795
[2025-10-11 21:29:52] 2025-10-12 01:28:29,816 | INFO     | intersect: -377105932.11927795
[2025-10-11 21:29:52] 2025-10-12 01:28:29,816 | INFO     | chi2: 0.7326548528000785
[2025-10-11 21:29:52] 2025-10-12 01:28:29,817 | INFO     | current chi2=0.7326548528000785 (change=73.67225489060459 %)
[2025-10-11 21:29:52] 2025-10-12 01:28:29,819 | INFO     | sum of square deviations: 36034103004.97543
[2025-10-11 21:29:52] 2025-10-12 01:28:29,826 | INFO     | sum of deviations: -2144575947.9672012
[2025-10-11 21:29:52] 2025-10-12 01:28:29,826 | INFO     | mean x: 1760217570.7827868
[2025-10-11 21:29:52] 2025-10-12 01:28:29,826 | INFO     | mean y: 2697165.62295082
[2025-10-11 21:29:52] 2025-10-12 01:28:29,826 | INFO     | -- intersect: 107456822.4671574
[2025-10-11 21:29:52] 2025-10-12 01:28:29,827 | INFO     | intersect: 107456822.4671574
[2025-10-11 21:29:52] 2025-10-12 01:28:29,827 | INFO     | chi2: 0.7167346333513419
[2025-10-11 21:29:52] 2025-10-12 01:28:29,828 | INFO     | current chi2=0.7167346333513419 (change=2.172949430129654 %)
[2025-10-11 21:29:52] 2025-10-12 01:28:29,828 | INFO     | left removable region: 20
[2025-10-11 21:29:52] 2025-10-12 01:28:29,828 | INFO     | sum of square deviations: 31579126086.52677
[2025-10-11 21:29:52] 2025-10-12 01:28:29,834 | INFO     | sum of deviations: 24642837913.648838
[2025-10-11 21:29:52] 2025-10-12 01:28:29,835 | INFO     | mean x: 1760217540.325482
[2025-10-11 21:29:52] 2025-10-12 01:28:29,835 | INFO     | mean y: 2702152.449678801
[2025-10-11 21:29:52] 2025-10-12 01:28:29,835 | INFO     | -- intersect: -1370887332.5838912
[2025-10-11 21:29:52] 2025-10-12 01:28:29,835 | INFO     | intersect: -1370887332.5838912
[2025-10-11 21:29:52] 2025-10-12 01:28:29,836 | INFO     | chi2: 0.0048432768875030134
[2025-10-11 21:29:52] 2025-10-12 01:28:29,836 | INFO     | -- intersect: -1370887332.5838912
[2025-10-11 21:29:52] 2025-10-12 01:28:29,836 | INFO     | current memory leak: 0.78 B/s (using 467 data points, chi2=0.00)
[2025-10-11 21:29:52] 2025-10-12 01:28:29,837 | INFO     | could have reported an average CPU frequency of 2600 MHz (20 samples)
[2025-10-11 21:29:52] 2025-10-12 01:28:29,839 | INFO     | ..............................
[2025-10-11 21:29:52] 2025-10-12 01:28:29,840 | INFO     | . Timing measurements:
[2025-10-11 21:29:52] 2025-10-12 01:28:29,840 | INFO     | . get job = 0 s
[2025-10-11 21:29:52] 2025-10-12 01:28:29,840 | INFO     | . initial setup = 6 s
[2025-10-11 21:29:52] 2025-10-12 01:28:29,840 | INFO     | . payload setup = 34 s
[2025-10-11 21:29:52] 2025-10-12 01:28:29,840 | INFO     | . stage-in = 0 s
[2025-10-11 21:29:52] 2025-10-12 01:28:29,840 | INFO     | . payload execution = 30370 s
[2025-10-11 21:29:52] 2025-10-12 01:28:29,840 | INFO     | . stage-out = 4 s
[2025-10-11 21:29:52] 2025-10-12 01:28:29,840 | INFO     | . log creation = 0 s
[2025-10-11 21:29:52] 2025-10-12 01:28:29,841 | INFO     | ..............................
[2025-10-11 21:29:52] 2025-10-12 01:28:30,290 | INFO     | 
[2025-10-11 21:29:52] 2025-10-12 01:28:30,290 | INFO     | job summary report
[2025-10-11 21:29:52] 2025-10-12 01:28:30,290 | INFO     | --------------------------------------------------
[2025-10-11 21:29:52] 2025-10-12 01:28:30,290 | INFO     | PanDA job id: 6837932487
[2025-10-11 21:29:52] 2025-10-12 01:28:30,290 | INFO     | task id: 46676269
[2025-10-11 21:29:52] 2025-10-12 01:28:30,291 | INFO     | errors: (none)
[2025-10-11 21:29:52] 2025-10-12 01:28:30,291 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:29:52] 2025-10-12 01:28:30,291 | INFO     | pilot state: finished 
[2025-10-11 21:29:52] 2025-10-12 01:28:30,291 | INFO     | transexitcode: 0
[2025-10-11 21:29:52] 2025-10-12 01:28:30,291 | INFO     | exeerrorcode: 0
[2025-10-11 21:29:52] 2025-10-12 01:28:30,291 | INFO     | exeerrordiag: 
[2025-10-11 21:29:52] 2025-10-12 01:28:30,291 | INFO     | exitcode: 0
[2025-10-11 21:29:52] 2025-10-12 01:28:30,291 | INFO     | exitmsg: OK
[2025-10-11 21:29:52] 2025-10-12 01:28:30,291 | INFO     | cpuconsumptiontime: 55141 s
[2025-10-11 21:29:52] 2025-10-12 01:28:30,292 | INFO     | nevents: 400
[2025-10-11 21:29:52] 2025-10-12 01:28:30,292 | INFO     | neventsw: 0
[2025-10-11 21:29:52] 2025-10-12 01:28:30,292 | INFO     | pid: 1103785
[2025-10-11 21:29:52] 2025-10-12 01:28:30,292 | INFO     | pgrp: 1103785
[2025-10-11 21:29:52] 2025-10-12 01:28:30,292 | INFO     | corecount: 12
[2025-10-11 21:29:52] 2025-10-12 01:28:30,292 | INFO     | event service: False
[2025-10-11 21:29:52] 2025-10-12 01:28:30,292 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348885, 3: 2348913, 13: 2348941, 24: 2348997, 33: 2349415, 35: 2349471, 30410: 2387269, 30416: 2396295, 30418: 2396351, 30477: 
[2025-10-11 21:29:52] 2025-10-12 01:28:30,292 | INFO     | --------------------------------------------------
[2025-10-11 21:29:52] 2025-10-12 01:28:30,292 | INFO     | 
[2025-10-11 21:29:52] 2025-10-12 01:28:30,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 21:29:52] 2025-10-12 01:28:30,358 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,359 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,359 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,359 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:29:52] 2025-10-12 01:28:30,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,361 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:29:52] 2025-10-12 01:28:30,361 | INFO     | job 6837932487 has completed (purged errors)
[2025-10-11 21:29:52] 2025-10-12 01:28:30,361 | INFO     | overall cleanup function is called
[2025-10-11 21:29:52] 2025-10-12 01:28:31,379 | INFO     | --- collectZombieJob: --- 10, [1103785]
[2025-10-11 21:29:52] 2025-10-12 01:28:31,379 | INFO     | zombie collector waiting for pid 1103785
[2025-10-11 21:29:52] 2025-10-12 01:28:31,380 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:29:52] 2025-10-12 01:28:31,380 | INFO     | collected zombie processes
[2025-10-11 21:29:52] 2025-10-12 01:28:31,380 | INFO     | will attempt to kill all subprocesses of pid=1103785
[2025-10-11 21:29:52] 2025-10-12 01:28:32,935 | INFO     | process IDs to be killed: [1103785] (in reverse order)
[2025-10-11 21:29:52] 2025-10-12 01:28:33,072 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:29:52] 2025-10-12 01:28:33,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:29:52] 2025-10-12 01:28:33,184 | INFO     | did not find any defunct processes belonging to 1103785
[2025-10-11 21:29:52] 2025-10-12 01:28:33,198 | INFO     | did not find any defunct processes belonging to 1103785
[2025-10-11 21:29:52] 2025-10-12 01:28:33,199 | INFO     | ready for new job
[2025-10-11 21:29:52] 2025-10-12 01:28:33,199 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:29:52] 2025-10-12 01:28:33,206 | INFO     | ***************************************
[2025-10-11 21:29:52] 2025-10-12 01:28:33,207 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:29:52] 2025-10-12 01:28:33,207 | INFO     | ***************************************
[2025-10-11 21:29:52] 2025-10-12 01:28:33,207 | INFO     | 
[2025-10-11 21:29:52] 2025-10-12 01:28:33,213 | INFO     | architecture information:
[2025-10-11 21:29:52] 2025-10-12 01:28:33,217 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:29:52] 2025-10-12 01:28:33,266 | INFO     | cat /etc/os-release:
[2025-10-11 21:29:52] NAME="CentOS Linux"
[2025-10-11 21:29:52] VERSION="7 (Core)"
[2025-10-11 21:29:52] ID="centos"
[2025-10-11 21:29:52] ID_LIKE="rhel fedora"
[2025-10-11 21:29:52] VERSION_ID="7"
[2025-10-11 21:29:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:29:52] ANSI_COLOR="0;31"
[2025-10-11 21:29:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:29:52] HOME_URL="https://www.centos.org/"
[2025-10-11 21:29:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:29:52] 
[2025-10-11 21:29:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:29:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:29:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:29:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:29:52] 
[2025-10-11 21:29:52] 2025-10-12 01:28:33,267 | INFO     | ***************************************
[2025-10-11 21:29:52] 2025-10-12 01:28:33,770 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 21:29:52] 2025-10-12 01:28:33,851 | INFO     | sufficient remaining disk space (53160706048 B)
[2025-10-11 21:29:52] 2025-10-12 01:28:33,851 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:29:52] 2025-10-12 01:28:33,851 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:29:52] 2025-10-12 01:28:33,851 | INFO     | update_server=False
[2025-10-11 21:29:52] 2025-10-12 01:28:33,851 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:29:52] 2025-10-12 01:28:33,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:29:52] 2025-10-12 01:28:33,906 | INFO     | all data control threads have been joined
[2025-10-11 21:29:52] 2025-10-12 01:28:34,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:29:52] 2025-10-12 01:28:34,104 | INFO     | aborting loop
[2025-10-11 21:29:52] 2025-10-12 01:28:34,747 | INFO     | all job control threads have been joined
[2025-10-11 21:29:52] 2025-10-12 01:28:34,857 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:34,927 | INFO     | [data] control thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,110 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,140 | INFO     | all payload control threads have been joined
[2025-10-11 21:29:52] 2025-10-12 01:28:35,238 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,244 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:29:52] 2025-10-12 01:28:35,524 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,591 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,592 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,749 | INFO     | [job] validate thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,750 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,753 | INFO     | [job] control thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,859 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:35,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:29:52] 2025-10-12 01:28:35,912 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:36,146 | INFO     | [payload] control thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:36,327 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:28:39,967 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:29:52] 2025-10-12 01:29:06,522 | INFO     | PID=1095851 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:29:52] 2025-10-12 01:29:06,523 | INFO     | .. there are 7 such processes running
[2025-10-11 21:29:52] 2025-10-12 01:29:06,523 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:29:52] 2025-10-12 01:29:06,523 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:29:52] 2025-10-12 01:29:06,523 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:29:52] 2025-10-12 01:29:22,446 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:29:52] 2025-10-12 01:29:22,512 [wrapper] supervise_pilot (15 min periods counter: 35)
[2025-10-11 21:29:52] 2025-10-12 01:29:24,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140149618714432)>', '<ExcThread(monitor, started 140149119764224)>']
[2025-10-11 21:29:52] 2025-10-12 01:29:24,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:29:52] 2025-10-12 01:29:24,840 | INFO     | [monitor] control thread has ended
[2025-10-11 21:29:52] 2025-10-12 01:29:29,087 | INFO     | all workflow threads have been joined
[2025-10-11 21:29:52] 2025-10-12 01:29:29,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:29:52] 2025-10-12 01:29:29,088 | INFO     | traces error code: 0
[2025-10-11 21:29:52] 2025-10-12 01:29:29,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:29:52] 2025-10-12 01:29:30,540 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:29:52] 2025-10-12 01:29:30,554 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:29:52] 2025-10-12 01:29:30,605 [wrapper] pilotpid: 1095851
[2025-10-11 21:29:52] 2025-10-12 01:29:30,632 [wrapper] Pilot exit status: 0
[2025-10-11 21:29:52] 2025-10-12 01:29:30,805 [wrapper] pandaids: 6837932487
[2025-10-11 21:29:52] 2025-10-12 01:29:31,432 [wrapper] cleanup supervisor_pilot 1795106 1095852
[2025-10-11 21:29:52] 2025-10-12 01:29:31,465 [wrapper] Test setup, not cleaning
[2025-10-11 21:29:52] 2025-10-12 01:29:31,516 [wrapper] apfmon messages muted
[2025-10-11 21:29:52] 2025-10-12 01:29:31,568 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:29:52] 2025-10-12 01:29:31,593 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:29:52]  *** Error codes and diagnostics ***
[2025-10-11 21:29:52]     "exeErrorCode": 0,
[2025-10-11 21:29:52]     "exeErrorDiag": "",
[2025-10-11 21:29:52]     "pilotErrorCode": 0,
[2025-10-11 21:29:52]     "pilotErrorDiag": "",
[2025-10-11 21:29:52]  *** Listing of results directory ***
[2025-10-11 21:29:52] total 415592
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:59 queuedata.json
[2025-10-11 21:29:52] -rwx------. 1 boincer umatlas     36292 Oct 10 21:59 runpilot2-wrapper.sh
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas       100 Oct 11 12:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:29:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 12:58 run_atlas
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas       105 Oct 11 12:58 job.xml
[2025-10-11 21:29:52] -rw-r--r--. 2 boincer umatlas 218823209 Oct 11 12:58 EVNT.46676267._001976.pool.root.1
[2025-10-11 21:29:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 12:58 start_atlas.sh
[2025-10-11 21:29:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 12:58 shared
[2025-10-11 21:29:52] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 12:58 input.tar.gz
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas         0 Oct 11 12:58 boinc_lockfile
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 12:58 pandaJob.out
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas    975512 Oct 11 12:59 agis_schedconf.cvmfs.json
[2025-10-11 21:29:52] drwx------. 5 boincer umatlas      4096 Oct 11 12:59 pilot3
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas 194150263 Oct 11 21:26 HITS.46676269._049005.pool.root.1
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas       531 Oct 11 21:26 boinc_task_state.xml
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas      1042 Oct 11 21:27 memory_monitor_summary.json
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas   1560580 Oct 11 21:27 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas    706654 Oct 11 21:27 log.46676269._049005.job.log.tgz.1
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas      6661 Oct 11 21:27 init_data.xml
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas        95 Oct 11 21:28 pilot_heartbeat.json
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas      7826 Oct 11 21:28 heartbeat.json
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas      4823 Oct 11 21:29 pilotlog.txt
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas   3639702 Oct 11 21:29 log.46676269._049005.job.log.1
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:29 boinc_mmap_file
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas       357 Oct 11 21:29 output.list
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas        28 Oct 11 21:29 wrapper_checkpoint.txt
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas       620 Oct 11 21:29 runtime_log
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas   4362240 Oct 11 21:29 result.tar.gz
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas       657 Oct 11 21:29 UJULDmd4dR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbxQMDmt3Pk2n.diag
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas      8706 Oct 11 21:29 runtime_log.err
[2025-10-11 21:29:52] -rw-r--r--. 1 boincer umatlas     20734 Oct 11 21:29 stderr.txt
[2025-10-11 21:29:52] HITS file was successfully produced:
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas 194150263 Oct 11 21:26 shared/HITS.pool.root.1
[2025-10-11 21:29:52]  *** Contents of shared directory: ***
[2025-10-11 21:29:52] total 408140
[2025-10-11 21:29:52] -rw-r--r--. 2 boincer umatlas 218823209 Oct 11 12:58 ATLAS.root_0
[2025-10-11 21:29:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 12:58 start_atlas.sh
[2025-10-11 21:29:52] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 12:58 input.tar.gz
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas 194150263 Oct 11 21:26 HITS.pool.root.1
[2025-10-11 21:29:52] -rw-------. 1 boincer umatlas   4362240 Oct 11 21:29 result.tar.gz
21:29:54 (1091935): run_atlas exited; CPU time 55896.716211
21:29:54 (1091935): called boinc_finish(0)

</stderr_txt>
]]>

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