Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:00 (947590): wrapper (7.7.26015): starting
00:05:00 (947590): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:05:00] Arguments: --nthreads 9
[2025-10-11 00:05:00] Threads: 9
[2025-10-11 00:05:00] Checking for CVMFS
[2025-10-11 00:05:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:05:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:05:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:05:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:05:03] 2.13.2.0 1270615 127317 623556 151571 1 444 12461869 21042177 30635 16776704 0 81949203 99.350 128818252 29271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:05:03] CVMFS is ok
[2025-10-11 00:05:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:05:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:05:03] Further information can be found at the LHC@home message board.
[2025-10-11 00:05:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:05:03] Checking for apptainer binary...
[2025-10-11 00:05:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:05:03] Running /usr/bin/apptainer --version
[2025-10-11 00:05:04] apptainer version 1.4.3-1.el9
[2025-10-11 00:05:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:05:05] c-16-12.aglt2.org
[2025-10-11 00:05:05] apptainer works
[2025-10-11 00:05:05] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:05:05] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:05:05] Starting ATLAS job with PandaID=6837932454
[2025-10-11 00:05:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 00:04:44]  *** The last 200 lines of the pilot log: ***
[2025-10-12 00:04:44] 2025-10-11 18:40:24,147 | INFO     | sum of square deviations: 189084897594.70645
[2025-10-12 00:04:44] 2025-10-11 18:40:24,360 | INFO     | sum of deviations: 500424236708.9965
[2025-10-12 00:04:44] 2025-10-11 18:40:24,360 | INFO     | mean x: 1760181747.5790095
[2025-10-12 00:04:44] 2025-10-11 18:40:24,360 | INFO     | mean y: 2050312.0672169812
[2025-10-12 00:04:44] 2025-10-11 18:40:24,360 | INFO     | -- intersect: -4656373595.427302
[2025-10-12 00:04:44] 2025-10-11 18:40:24,360 | INFO     | intersect: -4656373595.427302
[2025-10-12 00:04:44] 2025-10-11 18:40:24,420 | INFO     | chi2: 7.157773688274221
[2025-10-12 00:04:44] 2025-10-11 18:40:24,420 | INFO     | current chi2=7.157773688274221 (change=8.510761875356044 %)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,420 | INFO     | right removable region: 847
[2025-10-12 00:04:44] 2025-10-11 18:40:24,422 | INFO     | sum of square deviations: 189084494324.86313
[2025-10-12 00:04:44] 2025-10-11 18:40:24,519 | INFO     | sum of deviations: 229728841299.84924
[2025-10-12 00:04:44] 2025-10-11 18:40:24,520 | INFO     | mean x: 1760182052.57783
[2025-10-12 00:04:44] 2025-10-11 18:40:24,520 | INFO     | mean y: 2058698.3962264152
[2025-10-12 00:04:44] 2025-10-11 18:40:24,520 | INFO     | -- intersect: -2136480396.8336697
[2025-10-12 00:04:44] 2025-10-11 18:40:24,520 | INFO     | intersect: -2136480396.8336697
[2025-10-12 00:04:44] 2025-10-11 18:40:24,521 | INFO     | chi2: 4.002010687417113
[2025-10-12 00:04:44] 2025-10-11 18:40:24,521 | INFO     | current chi2=4.002010687417113 (change=48.84709621955749 %)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,523 | INFO     | sum of square deviations: 185759218644.18753
[2025-10-12 00:04:44] 2025-10-11 18:40:24,533 | INFO     | monitor loop #1228: job 0:6837932454 is in state 'finished'
[2025-10-12 00:04:44] 2025-10-11 18:40:24,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,541 | INFO     | sum of deviations: 92868638591.88345
[2025-10-12 00:04:44] 2025-10-11 18:40:24,541 | INFO     | mean x: 1760182205.0830367
[2025-10-12 00:04:44] 2025-10-11 18:40:24,541 | INFO     | mean y: 2064971.2016607355
[2025-10-12 00:04:44] 2025-10-11 18:40:24,542 | INFO     | -- intersect: -877922176.961529
[2025-10-12 00:04:44] 2025-10-11 18:40:24,542 | INFO     | intersect: -877922176.961529
[2025-10-12 00:04:44] 2025-10-11 18:40:24,543 | INFO     | chi2: 2.6142179200885662
[2025-10-12 00:04:44] 2025-10-11 18:40:24,543 | INFO     | current chi2=2.6142179200885662 (change=34.67738783636843 %)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,544 | INFO     | sum of square deviations: 182473204303.14072
[2025-10-12 00:04:44] 2025-10-11 18:40:24,562 | INFO     | sum of deviations: -10365441814.03807
[2025-10-12 00:04:44] 2025-10-11 18:40:24,563 | INFO     | mean x: 1760182357.5871122
[2025-10-12 00:04:44] 2025-10-11 18:40:24,563 | INFO     | mean y: 2069761.4594272077
[2025-10-12 00:04:44] 2025-10-11 18:40:24,563 | INFO     | -- intersect: 102057416.52003126
[2025-10-12 00:04:44] 2025-10-11 18:40:24,563 | INFO     | intersect: 102057416.52003126
[2025-10-12 00:04:44] 2025-10-11 18:40:24,564 | INFO     | chi2: 1.851387760788653
[2025-10-12 00:04:44] 2025-10-11 18:40:24,564 | INFO     | current chi2=1.851387760788653 (change=29.180052414072254 %)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,565 | INFO     | sum of square deviations: 179226269797.42615
[2025-10-12 00:04:44] 2025-10-11 18:40:24,583 | INFO     | sum of deviations: -61306588234.51746
[2025-10-12 00:04:44] 2025-10-11 18:40:24,583 | INFO     | mean x: 1760182510.0888355
[2025-10-12 00:04:44] 2025-10-11 18:40:24,583 | INFO     | mean y: 2072152.8583433374
[2025-10-12 00:04:44] 2025-10-11 18:40:24,584 | INFO     | -- intersect: 604164605.51935
[2025-10-12 00:04:44] 2025-10-11 18:40:24,584 | INFO     | intersect: 604164605.51935
[2025-10-12 00:04:44] 2025-10-11 18:40:24,585 | INFO     | chi2: 1.6425113442277053
[2025-10-12 00:04:44] 2025-10-11 18:40:24,585 | INFO     | current chi2=1.6425113442277053 (change=11.282153905563833 %)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,585 | INFO     | left removable region: 40
[2025-10-12 00:04:44] 2025-10-11 18:40:24,586 | INFO     | sum of square deviations: 162962450015.92822
[2025-10-12 00:04:44] 2025-10-11 18:40:24,602 | INFO     | sum of deviations: -73035745376.34816
[2025-10-12 00:04:44] 2025-10-11 18:40:24,602 | INFO     | mean x: 1760182937.086741
[2025-10-12 00:04:44] 2025-10-11 18:40:24,603 | INFO     | mean y: 2077416.2478314745
[2025-10-12 00:04:44] 2025-10-11 18:40:24,603 | INFO     | -- intersect: 790947937.01071
[2025-10-12 00:04:44] 2025-10-11 18:40:24,603 | INFO     | intersect: 790947937.01071
[2025-10-12 00:04:44] 2025-10-11 18:40:24,604 | INFO     | chi2: 0.7692126777030719
[2025-10-12 00:04:44] 2025-10-11 18:40:24,604 | INFO     | -- intersect: 790947937.01071
[2025-10-12 00:04:44] 2025-10-11 18:40:24,604 | INFO     | current memory leak: -0.45 B/s (using 807 data points, chi2=0.77)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,605 | INFO     | could have reported an average CPU frequency of 2900 MHz (23 samples)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,606 | INFO     | ..............................
[2025-10-12 00:04:44] 2025-10-11 18:40:24,606 | INFO     | . Timing measurements:
[2025-10-12 00:04:44] 2025-10-11 18:40:24,606 | INFO     | . get job = 0 s
[2025-10-12 00:04:44] 2025-10-11 18:40:24,606 | INFO     | . initial setup = 24 s
[2025-10-12 00:04:44] 2025-10-11 18:40:24,606 | INFO     | . payload setup = 81 s
[2025-10-12 00:04:44] 2025-10-11 18:40:24,606 | INFO     | . stage-in = 1 s
[2025-10-12 00:04:44] 2025-10-11 18:40:24,606 | INFO     | . payload execution = 52072 s
[2025-10-12 00:04:44] 2025-10-11 18:40:24,607 | INFO     | . stage-out = 28 s
[2025-10-12 00:04:44] 2025-10-11 18:40:24,607 | INFO     | . log creation = 3 s
[2025-10-12 00:04:44] 2025-10-11 18:40:24,607 | INFO     | ..............................
[2025-10-12 00:04:44] 2025-10-11 18:40:24,742 | INFO     | 
[2025-10-12 00:04:44] 2025-10-11 18:40:24,742 | INFO     | job summary report
[2025-10-12 00:04:44] 2025-10-11 18:40:24,742 | INFO     | --------------------------------------------------
[2025-10-12 00:04:44] 2025-10-11 18:40:24,742 | INFO     | PanDA job id: 6837932454
[2025-10-12 00:04:44] 2025-10-11 18:40:24,742 | INFO     | task id: 46676269
[2025-10-12 00:04:44] 2025-10-11 18:40:24,743 | INFO     | errors: (none)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,743 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 00:04:44] 2025-10-11 18:40:24,743 | INFO     | pilot state: finished 
[2025-10-12 00:04:44] 2025-10-11 18:40:24,743 | INFO     | transexitcode: 0
[2025-10-12 00:04:44] 2025-10-11 18:40:24,743 | INFO     | exeerrorcode: 0
[2025-10-12 00:04:44] 2025-10-11 18:40:24,743 | INFO     | exeerrordiag: 
[2025-10-12 00:04:44] 2025-10-11 18:40:24,743 | INFO     | exitcode: 0
[2025-10-12 00:04:44] 2025-10-11 18:40:24,744 | INFO     | exitmsg: OK
[2025-10-12 00:04:44] 2025-10-11 18:40:24,744 | INFO     | cpuconsumptiontime: 81973 s
[2025-10-12 00:04:44] 2025-10-11 18:40:24,744 | INFO     | nevents: 400
[2025-10-12 00:04:44] 2025-10-11 18:40:24,744 | INFO     | neventsw: 0
[2025-10-12 00:04:44] 2025-10-11 18:40:24,744 | INFO     | pid: 982373
[2025-10-12 00:04:44] 2025-10-11 18:40:24,744 | INFO     | pgrp: 982373
[2025-10-12 00:04:44] 2025-10-11 18:40:24,744 | INFO     | corecount: 9
[2025-10-12 00:04:44] 2025-10-11 18:40:24,745 | INFO     | event service: False
[2025-10-12 00:04:44] 2025-10-11 18:40:24,745 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348770, 5: 2348770, 6: 2348969, 9: 2349125, 21: 2349153, 34: 2349181, 46: 2349209, 60: 2349439, 62: 2349807, 72: 23
[2025-10-12 00:04:44] 2025-10-11 18:40:24,745 | INFO     | --------------------------------------------------
[2025-10-12 00:04:44] 2025-10-11 18:40:24,745 | INFO     | 
[2025-10-12 00:04:44] 2025-10-11 18:40:24,745 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 00:04:44] 2025-10-11 18:40:24,901 | INFO     | time since job start (52384s) is within the limit (172800.0s)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,968 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,968 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,969 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,969 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,969 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,969 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,969 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,969 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,970 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,970 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,970 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,970 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,970 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,970 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,970 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,971 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,971 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 00:04:44] 2025-10-11 18:40:24,971 | INFO     | job 6837932454 has completed (purged errors)
[2025-10-12 00:04:44] 2025-10-11 18:40:24,971 | INFO     | overall cleanup function is called
[2025-10-12 00:04:44] 2025-10-11 18:40:25,995 | INFO     | --- collectZombieJob: --- 10, [982373]
[2025-10-12 00:04:44] 2025-10-11 18:40:25,995 | INFO     | zombie collector waiting for pid 982373
[2025-10-12 00:04:44] 2025-10-11 18:40:25,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 00:04:44] 2025-10-11 18:40:25,995 | INFO     | collected zombie processes
[2025-10-12 00:04:44] 2025-10-11 18:40:25,995 | INFO     | will attempt to kill all subprocesses of pid=982373
[2025-10-12 00:04:44] 2025-10-11 18:40:34,302 | INFO     | process IDs to be killed: [982373] (in reverse order)
[2025-10-12 00:04:44] 2025-10-11 18:40:34,782 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 00:04:44] 2025-10-11 18:40:34,782 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 00:04:44] 2025-10-11 18:40:34,820 | INFO     | did not find any defunct processes belonging to 982373
[2025-10-12 00:04:44] 2025-10-11 18:40:34,866 | INFO     | did not find any defunct processes belonging to 982373
[2025-10-12 00:04:44] 2025-10-11 18:40:34,866 | INFO     | ready for new job
[2025-10-12 00:04:44] 2025-10-11 18:40:34,867 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 00:04:44] 2025-10-11 18:40:34,869 | INFO     | ***************************************
[2025-10-12 00:04:44] 2025-10-11 18:40:34,874 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 00:04:44] 2025-10-11 18:40:34,874 | INFO     | ***************************************
[2025-10-12 00:04:44] 2025-10-11 18:40:34,874 | INFO     | 
[2025-10-12 00:04:44] 2025-10-11 18:40:34,888 | INFO     | architecture information:
[2025-10-12 00:04:44] 2025-10-11 18:40:34,893 | INFO     | executing command: cat /etc/os-release
[2025-10-12 00:04:44] 2025-10-11 18:40:34,933 | INFO     | cat /etc/os-release:
[2025-10-12 00:04:44] NAME="CentOS Linux"
[2025-10-12 00:04:44] VERSION="7 (Core)"
[2025-10-12 00:04:44] ID="centos"
[2025-10-12 00:04:44] ID_LIKE="rhel fedora"
[2025-10-12 00:04:44] VERSION_ID="7"
[2025-10-12 00:04:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 00:04:44] ANSI_COLOR="0;31"
[2025-10-12 00:04:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 00:04:44] HOME_URL="https://www.centos.org/"
[2025-10-12 00:04:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 00:04:44] 
[2025-10-12 00:04:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 00:04:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 00:04:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 00:04:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 00:04:44] 
[2025-10-12 00:04:44] 2025-10-11 18:40:34,933 | INFO     | ***************************************
[2025-10-12 00:04:44] 2025-10-11 18:40:35,461 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 00:04:44] 2025-10-11 18:40:35,664 | INFO     | sufficient remaining disk space (52525268992 B)
[2025-10-12 00:04:44] 2025-10-11 18:40:35,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 00:04:44] 2025-10-11 18:40:35,665 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 00:04:44] 2025-10-11 18:40:35,665 | INFO     | update_server=False
[2025-10-12 00:04:44] 2025-10-11 18:40:35,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 00:04:44] 2025-10-11 18:40:35,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 00:04:44] 2025-10-11 18:40:35,709 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:04:44] 2025-10-11 18:40:35,710 | INFO     | aborting loop
[2025-10-12 00:04:44] 2025-10-11 18:40:36,212 | INFO     | all data control threads have been joined
[2025-10-12 00:04:44] 2025-10-11 18:40:36,671 | INFO     | [job] retrieve thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:36,705 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:36,719 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:36,719 | INFO     | [job] job monitor thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:37,176 | INFO     | all payload control threads have been joined
[2025-10-12 00:04:44] 2025-10-11 18:40:37,226 | INFO     | [data] copytool_in thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:37,258 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:37,281 | INFO     | [data] control thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:37,298 | INFO     | all job control threads have been joined
[2025-10-12 00:04:44] 2025-10-11 18:40:37,445 | INFO     | [payload] validate_post thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:37,628 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 00:04:44] 2025-10-11 18:40:37,683 | INFO     | [data] copytool_out thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:37,732 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:37,743 | INFO     | [payload] failed_post thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:37,749 | INFO     | [job] validate thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:38,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 00:04:44] 2025-10-11 18:40:38,185 | INFO     | [payload] control thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:38,316 | INFO     | [job] control thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:39,202 | INFO     | [job] queue monitor thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:40:41,640 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 00:04:44] 2025-10-11 18:41:08,131 | INFO     | PID=956726 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 00:04:44] 2025-10-11 18:41:08,131 | INFO     | .. there are 40 such processes running
[2025-10-12 00:04:44] 2025-10-11 18:41:08,133 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 00:04:44] 2025-10-11 18:41:08,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 00:04:44] 2025-10-11 18:41:08,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 00:04:44] 2025-10-11 18:41:21,197 | INFO     | [monitor] cgroup control has ended
[2025-10-12 00:04:44] 2025-10-11 18:41:22,286 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492878550848)>', '<ExcThread(monitor, started 140492222207744)>']
[2025-10-12 00:04:44] 2025-10-11 18:41:22,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 00:04:44] 2025-10-11 18:41:22,311 | INFO     | [monitor] control thread has ended
[2025-10-12 00:04:44] 2025-10-11 18:41:27,316 | INFO     | all workflow threads have been joined
[2025-10-12 00:04:44] 2025-10-11 18:41:27,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 00:04:44] 2025-10-11 18:41:27,316 | INFO     | traces error code: 0
[2025-10-12 00:04:44] 2025-10-11 18:41:27,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 00:04:44] 2025-10-11 18:41:29,592 [wrapper] ==== pilot stdout END ====
[2025-10-12 00:04:44] 2025-10-11 18:41:29,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 00:04:44] 2025-10-11 18:41:29,687 [wrapper] pilotpid: 956726
[2025-10-12 00:04:44] 2025-10-11 18:41:29,761 [wrapper] Pilot exit status: 0
[2025-10-12 00:04:44] 2025-10-11 18:41:30,035 [wrapper] pandaids: 6837932454
[2025-10-12 00:04:44] 2025-10-11 18:41:30,728 [wrapper] cleanup supervisor_pilot 3268406 956727
[2025-10-12 00:04:44] 2025-10-11 18:41:30,732 [wrapper] Test setup, not cleaning
[2025-10-12 00:04:44] 2025-10-11 18:41:30,758 [wrapper] apfmon messages muted
[2025-10-12 00:04:44] 2025-10-11 18:41:30,783 [wrapper] ==== wrapper stdout END ====
[2025-10-12 00:04:44] 2025-10-11 18:41:30,837 [wrapper] ==== wrapper stderr END ====
[2025-10-12 00:04:44]  *** Error codes and diagnostics ***
[2025-10-12 00:04:44]     "exeErrorCode": 0,
[2025-10-12 00:04:44]     "exeErrorDiag": "",
[2025-10-12 00:04:44]     "pilotErrorCode": 0,
[2025-10-12 00:04:44]     "pilotErrorDiag": "",
[2025-10-12 00:04:44]  *** Listing of results directory ***
[2025-10-12 00:04:44] total 422820
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:59 queuedata.json
[2025-10-12 00:04:44] -rwx------. 1 boincer umatlas     36292 Oct 10 21:59 runpilot2-wrapper.sh
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 00:04:44] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:04 run_atlas
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:04 job.xml
[2025-10-12 00:04:44] -rw-r--r--. 2 boincer umatlas 221059563 Oct 11 00:05 EVNT.46676267._001975.pool.root.1
[2025-10-12 00:04:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:05 start_atlas.sh
[2025-10-12 00:04:44] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:05 shared
[2025-10-12 00:04:44] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 00:05 input.tar.gz
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:05 boinc_lockfile
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:05 pandaJob.out
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas    975509 Oct 11 00:06 agis_schedconf.cvmfs.json
[2025-10-12 00:04:44] drwx------. 5 boincer umatlas      4096 Oct 11 00:07 pilot3
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas 198642222 Oct 11 14:37 HITS.46676269._048972.pool.root.1
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas       530 Oct 11 14:37 boinc_task_state.xml
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas      1036 Oct 11 14:38 memory_monitor_summary.json
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas   1560580 Oct 11 14:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas    746403 Oct 11 14:39 log.46676269._048972.job.log.tgz.1
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas      7819 Oct 11 14:40 heartbeat.json
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas        96 Oct 11 14:41 pilot_heartbeat.json
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas      4823 Oct 11 14:41 pilotlog.txt
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas   3930373 Oct 11 14:41 log.46676269._048972.job.log.1
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas       357 Oct 11 14:41 output.list
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas       620 Oct 11 14:41 runtime_log
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas   4700160 Oct 11 14:41 result.tar.gz
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas      8699 Oct 11 14:41 runtime_log.err
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas       658 Oct 11 14:41 ehdNDmc4dR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5wQMDml5K1Gn.diag
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas      6525 Oct 12 00:04 init_data.xml
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas        27 Oct 12 00:04 wrapper_checkpoint.txt
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 00:04 boinc_mmap_file
[2025-10-12 00:04:44] -rw-r--r--. 1 boincer umatlas     21120 Oct 12 00:04 stderr.txt
[2025-10-12 00:04:44] HITS file was successfully produced:
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas 198642222 Oct 11 14:37 shared/HITS.pool.root.1
[2025-10-12 00:04:44]  *** Contents of shared directory: ***
[2025-10-12 00:04:44] total 415044
[2025-10-12 00:04:44] -rw-r--r--. 2 boincer umatlas 221059563 Oct 11 00:05 ATLAS.root_0
[2025-10-12 00:04:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:05 start_atlas.sh
[2025-10-12 00:04:44] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 00:05 input.tar.gz
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas 198642222 Oct 11 14:37 HITS.pool.root.1
[2025-10-12 00:04:44] -rw-------. 1 boincer umatlas   4700160 Oct 11 14:41 result.tar.gz
00:04:47 (947590): run_atlas exited; CPU time 83438.831015
00:04:47 (947590): called boinc_finish(0)

</stderr_txt>
]]>

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