Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:30 (3122615): wrapper (7.7.26015): starting
00:04:30 (3122615): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:04:30] Arguments: --nthreads 9
[2025-10-11 00:04:30] Threads: 9
[2025-10-11 00:04:30] Checking for CVMFS
[2025-10-11 00:04:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:04:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:04:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:04:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:04:31] 2.13.2.0 184081 105674 405768 151571 3 208 33788665 39288833 20992 16776704 0 139485572 99.531 178267464 30604 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:04:31] CVMFS is ok
[2025-10-11 00:04:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:04:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:04:31] Further information can be found at the LHC@home message board.
[2025-10-11 00:04:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:04:31] Checking for apptainer binary...
[2025-10-11 00:04:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:04:31] Running /usr/bin/apptainer --version
[2025-10-11 00:04:31] apptainer version 1.4.3-1.el9
[2025-10-11 00:04:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:04:31] c-211-20.aglt2.org
[2025-10-11 00:04:31] apptainer works
[2025-10-11 00:04:31] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:04:31] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:04:32] Starting ATLAS job with PandaID=6837932448
[2025-10-11 00:04:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:26:03]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:26:03] 2025-10-11 12:25:01,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 08:26:03] 2025-10-11 12:25:01,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:26:03] 2025-10-11 12:25:01,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:26:03] 2025-10-11 12:25:01,308 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:26:03] 2025-10-11 12:25:01,309 | INFO     | sum of square deviations: 36702918190.994316
[2025-10-11 08:26:03] 2025-10-11 12:25:01,317 | INFO     | sum of deviations: 132004753539.28308
[2025-10-11 08:26:03] 2025-10-11 12:25:01,318 | INFO     | mean x: 1760170512.2301426
[2025-10-11 08:26:03] 2025-10-11 12:25:01,318 | INFO     | mean y: 2539160.6700611
[2025-10-11 08:26:03] 2025-10-11 12:25:01,318 | INFO     | -- intersect: -6328043967.487439
[2025-10-11 08:26:03] 2025-10-11 12:25:01,318 | INFO     | intersect: -6328043967.487439
[2025-10-11 08:26:03] 2025-10-11 12:25:01,319 | INFO     | chi2: 2.8705727571005246
[2025-10-11 08:26:03] 2025-10-11 12:25:01,320 | INFO     | sum of square deviations: 35593006263.22629
[2025-10-11 08:26:03] 2025-10-11 12:25:01,328 | INFO     | sum of deviations: 166180162126.77798
[2025-10-11 08:26:03] 2025-10-11 12:25:01,329 | INFO     | mean x: 1760170359.7325103
[2025-10-11 08:26:03] 2025-10-11 12:25:01,329 | INFO     | mean y: 2543815.9444444445
[2025-10-11 08:26:03] 2025-10-11 12:25:01,329 | INFO     | -- intersect: -8215514349.41222
[2025-10-11 08:26:03] 2025-10-11 12:25:01,329 | INFO     | intersect: -8215514349.41222
[2025-10-11 08:26:03] 2025-10-11 12:25:01,330 | INFO     | chi2: 1.993654805362943
[2025-10-11 08:26:03] 2025-10-11 12:25:01,330 | INFO     | current chi2=1.993654805362943 (change=30.548535987059562 %)
[2025-10-11 08:26:03] 2025-10-11 12:25:01,331 | INFO     | sum of square deviations: 34505699410.45307
[2025-10-11 08:26:03] 2025-10-11 12:25:01,340 | INFO     | sum of deviations: 164207035465.19962
[2025-10-11 08:26:03] 2025-10-11 12:25:01,340 | INFO     | mean x: 1760170207.2349272
[2025-10-11 08:26:03] 2025-10-11 12:25:01,340 | INFO     | mean y: 2543539.130977131
[2025-10-11 08:26:03] 2025-10-11 12:25:01,341 | INFO     | -- intersect: -8373821426.149359
[2025-10-11 08:26:03] 2025-10-11 12:25:01,341 | INFO     | intersect: -8373821426.149359
[2025-10-11 08:26:03] 2025-10-11 12:25:01,342 | INFO     | chi2: 1.9935193408567202
[2025-10-11 08:26:03] 2025-10-11 12:25:01,342 | INFO     | current chi2=1.9935193408567202 (change=0.006794782419625261 %)
[2025-10-11 08:26:03] 2025-10-11 12:25:01,342 | INFO     | right removable region: 480
[2025-10-11 08:26:03] 2025-10-11 12:25:01,343 | INFO     | sum of square deviations: 35592937333.226295
[2025-10-11 08:26:03] 2025-10-11 12:25:01,352 | INFO     | sum of deviations: 32450173802.905327
[2025-10-11 08:26:03] 2025-10-11 12:25:01,352 | INFO     | mean x: 1760170664.7325103
[2025-10-11 08:26:03] 2025-10-11 12:25:01,352 | INFO     | mean y: 2552795.930041152
[2025-10-11 08:26:03] 2025-10-11 12:25:01,353 | INFO     | -- intersect: -1602199390.117425
[2025-10-11 08:26:03] 2025-10-11 12:25:01,353 | INFO     | intersect: -1602199390.117425
[2025-10-11 08:26:03] 2025-10-11 12:25:01,354 | INFO     | chi2: 1.0690209347843904
[2025-10-11 08:26:03] 2025-10-11 12:25:01,354 | INFO     | current chi2=1.0690209347843904 (change=62.75931581458416 %)
[2025-10-11 08:26:03] 2025-10-11 12:25:01,355 | INFO     | sum of square deviations: 34505590951.92073
[2025-10-11 08:26:03] 2025-10-11 12:25:01,363 | INFO     | sum of deviations: 14086897635.3555
[2025-10-11 08:26:03] 2025-10-11 12:25:01,363 | INFO     | mean x: 1760170817.2328482
[2025-10-11 08:26:03] 2025-10-11 12:25:01,363 | INFO     | mean y: 2555367.9521829523
[2025-10-11 08:26:03] 2025-10-11 12:25:01,363 | INFO     | -- intersect: -716033864.6637259
[2025-10-11 08:26:03] 2025-10-11 12:25:01,364 | INFO     | intersect: -716033864.6637259
[2025-10-11 08:26:03] 2025-10-11 12:25:01,364 | INFO     | chi2: 1.0225996104002117
[2025-10-11 08:26:03] 2025-10-11 12:25:01,365 | INFO     | current chi2=1.0225996104002117 (change=4.342414902617538 %)
[2025-10-11 08:26:03] 2025-10-11 12:25:01,365 | INFO     | left removable region: 20
[2025-10-11 08:26:03] 2025-10-11 12:25:01,366 | INFO     | sum of square deviations: 30180391440.215313
[2025-10-11 08:26:03] 2025-10-11 12:25:01,373 | INFO     | sum of deviations: 15183442753.923906
[2025-10-11 08:26:03] 2025-10-11 12:25:01,373 | INFO     | mean x: 1760170786.7413044
[2025-10-11 08:26:03] 2025-10-11 12:25:01,373 | INFO     | mean y: 2565099.2934782607
[2025-10-11 08:26:03] 2025-10-11 12:25:01,374 | INFO     | -- intersect: -882958616.6780843
[2025-10-11 08:26:03] 2025-10-11 12:25:01,374 | INFO     | intersect: -882958616.6780843
[2025-10-11 08:26:03] 2025-10-11 12:25:01,375 | INFO     | chi2: 0.02810422678060434
[2025-10-11 08:26:03] 2025-10-11 12:25:01,375 | INFO     | -- intersect: -882958616.6780843
[2025-10-11 08:26:03] 2025-10-11 12:25:01,375 | INFO     | current memory leak: 0.50 B/s (using 460 data points, chi2=0.03)
[2025-10-11 08:26:03] 2025-10-11 12:25:01,376 | INFO     | could have reported an average CPU frequency of 2900 MHz (20 samples)
[2025-10-11 08:26:03] 2025-10-11 12:25:01,377 | INFO     | ..............................
[2025-10-11 08:26:03] 2025-10-11 12:25:01,377 | INFO     | . Timing measurements:
[2025-10-11 08:26:03] 2025-10-11 12:25:01,377 | INFO     | . get job = 0 s
[2025-10-11 08:26:03] 2025-10-11 12:25:01,377 | INFO     | . initial setup = 3 s
[2025-10-11 08:26:03] 2025-10-11 12:25:01,377 | INFO     | . payload setup = 15 s
[2025-10-11 08:26:03] 2025-10-11 12:25:01,377 | INFO     | . stage-in = 0 s
[2025-10-11 08:26:03] 2025-10-11 12:25:01,378 | INFO     | . payload execution = 29934 s
[2025-10-11 08:26:03] 2025-10-11 12:25:01,378 | INFO     | . stage-out = 2 s
[2025-10-11 08:26:03] 2025-10-11 12:25:01,378 | INFO     | . log creation = 0 s
[2025-10-11 08:26:03] 2025-10-11 12:25:01,378 | INFO     | ..............................
[2025-10-11 08:26:03] 2025-10-11 12:25:01,681 | INFO     | 
[2025-10-11 08:26:03] 2025-10-11 12:25:01,682 | INFO     | job summary report
[2025-10-11 08:26:03] 2025-10-11 12:25:01,682 | INFO     | --------------------------------------------------
[2025-10-11 08:26:03] 2025-10-11 12:25:01,682 | INFO     | PanDA job id: 6837932448
[2025-10-11 08:26:03] 2025-10-11 12:25:01,682 | INFO     | task id: 46676269
[2025-10-11 08:26:03] 2025-10-11 12:25:01,682 | INFO     | errors: (none)
[2025-10-11 08:26:03] 2025-10-11 12:25:01,682 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:26:03] 2025-10-11 12:25:01,682 | INFO     | pilot state: finished 
[2025-10-11 08:26:03] 2025-10-11 12:25:01,683 | INFO     | transexitcode: 0
[2025-10-11 08:26:03] 2025-10-11 12:25:01,683 | INFO     | exeerrorcode: 0
[2025-10-11 08:26:03] 2025-10-11 12:25:01,683 | INFO     | exeerrordiag: 
[2025-10-11 08:26:03] 2025-10-11 12:25:01,683 | INFO     | exitcode: 0
[2025-10-11 08:26:03] 2025-10-11 12:25:01,683 | INFO     | exitmsg: OK
[2025-10-11 08:26:03] 2025-10-11 12:25:01,683 | INFO     | cpuconsumptiontime: 77860 s
[2025-10-11 08:26:03] 2025-10-11 12:25:01,684 | INFO     | nevents: 400
[2025-10-11 08:26:03] 2025-10-11 12:25:01,684 | INFO     | neventsw: 0
[2025-10-11 08:26:03] 2025-10-11 12:25:01,684 | INFO     | pid: 3148639
[2025-10-11 08:26:03] 2025-10-11 12:25:01,684 | INFO     | pgrp: 3148639
[2025-10-11 08:26:03] 2025-10-11 12:25:01,684 | INFO     | corecount: 9
[2025-10-11 08:26:03] 2025-10-11 12:25:01,684 | INFO     | event service: False
[2025-10-11 08:26:03] 2025-10-11 12:25:01,684 | INFO     | sizes: {0: 2348684, 1: 2348883, 12: 2349173, 23: 2349173, 29954: 2386800, 29956: 2395798, 29959: 2395982, 29964: 2396176}
[2025-10-11 08:26:03] 2025-10-11 12:25:01,685 | INFO     | --------------------------------------------------
[2025-10-11 08:26:03] 2025-10-11 12:25:01,685 | INFO     | 
[2025-10-11 08:26:03] 2025-10-11 12:25:01,685 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 08:26:03] 2025-10-11 12:25:01,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,721 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,721 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,723 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:26:03] 2025-10-11 12:25:01,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,724 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:26:03] 2025-10-11 12:25:01,724 | INFO     | job 6837932448 has completed (purged errors)
[2025-10-11 08:26:03] 2025-10-11 12:25:01,724 | INFO     | overall cleanup function is called
[2025-10-11 08:26:03] 2025-10-11 12:25:02,733 | INFO     | --- collectZombieJob: --- 10, [3148639]
[2025-10-11 08:26:03] 2025-10-11 12:25:02,733 | INFO     | zombie collector waiting for pid 3148639
[2025-10-11 08:26:03] 2025-10-11 12:25:02,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:26:03] 2025-10-11 12:25:02,734 | INFO     | collected zombie processes
[2025-10-11 08:26:03] 2025-10-11 12:25:02,734 | INFO     | will attempt to kill all subprocesses of pid=3148639
[2025-10-11 08:26:03] 2025-10-11 12:25:03,309 | INFO     | process IDs to be killed: [3148639] (in reverse order)
[2025-10-11 08:26:03] 2025-10-11 12:25:03,477 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:26:03] 2025-10-11 12:25:03,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:26:03] 2025-10-11 12:25:03,503 | INFO     | did not find any defunct processes belonging to 3148639
[2025-10-11 08:26:03] 2025-10-11 12:25:03,528 | INFO     | did not find any defunct processes belonging to 3148639
[2025-10-11 08:26:03] 2025-10-11 12:25:03,529 | INFO     | ready for new job
[2025-10-11 08:26:03] 2025-10-11 12:25:03,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:26:03] 2025-10-11 12:25:03,533 | INFO     | ***************************************
[2025-10-11 08:26:03] 2025-10-11 12:25:03,533 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:26:03] 2025-10-11 12:25:03,533 | INFO     | ***************************************
[2025-10-11 08:26:03] 2025-10-11 12:25:03,533 | INFO     | 
[2025-10-11 08:26:03] 2025-10-11 12:25:03,535 | INFO     | architecture information:
[2025-10-11 08:26:03] 2025-10-11 12:25:03,536 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:26:03] 2025-10-11 12:25:03,551 | INFO     | cat /etc/os-release:
[2025-10-11 08:26:03] NAME="CentOS Linux"
[2025-10-11 08:26:03] VERSION="7 (Core)"
[2025-10-11 08:26:03] ID="centos"
[2025-10-11 08:26:03] ID_LIKE="rhel fedora"
[2025-10-11 08:26:03] VERSION_ID="7"
[2025-10-11 08:26:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:26:03] ANSI_COLOR="0;31"
[2025-10-11 08:26:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:26:03] HOME_URL="https://www.centos.org/"
[2025-10-11 08:26:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:26:03] 
[2025-10-11 08:26:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:26:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:26:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:26:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:26:03] 
[2025-10-11 08:26:03] 2025-10-11 12:25:03,552 | INFO     | ***************************************
[2025-10-11 08:26:03] 2025-10-11 12:25:04,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 08:26:03] 2025-10-11 12:25:04,074 | INFO     | sufficient remaining disk space (52973010944 B)
[2025-10-11 08:26:03] 2025-10-11 12:25:04,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:26:03] 2025-10-11 12:25:04,075 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:26:03] 2025-10-11 12:25:04,075 | INFO     | update_server=False
[2025-10-11 08:26:03] 2025-10-11 12:25:04,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:26:03] 2025-10-11 12:25:04,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:26:03] 2025-10-11 12:25:04,076 | INFO     | aborting loop
[2025-10-11 08:26:03] 2025-10-11 12:25:04,122 | INFO     | all data control threads have been joined
[2025-10-11 08:26:03] 2025-10-11 12:25:04,218 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:26:03] 2025-10-11 12:25:04,436 | INFO     | all payload control threads have been joined
[2025-10-11 08:26:03] 2025-10-11 12:25:04,841 | INFO     | all job control threads have been joined
[2025-10-11 08:26:03] 2025-10-11 12:25:05,080 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:05,081 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:05,128 | INFO     | [data] control thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:05,217 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:05,441 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:05,444 | INFO     | [payload] control thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:05,681 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:05,689 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:05,724 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:05,847 | INFO     | [job] control thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:06,210 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:06,224 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:06,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:26:03] 2025-10-11 12:25:06,448 | INFO     | [job] validate thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:06,501 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:06,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:26:03] 2025-10-11 12:25:07,561 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:10,346 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:26:03] 2025-10-11 12:25:34,017 | INFO     | PID=3129024 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:26:03] 2025-10-11 12:25:34,017 | INFO     | .. there are 29 such processes running
[2025-10-11 08:26:03] 2025-10-11 12:25:34,018 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:26:03] 2025-10-11 12:25:34,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:26:03] 2025-10-11 12:25:34,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:26:03] 2025-10-11 12:25:55,795 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:26:03] 2025-10-11 12:25:57,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139658119280448)>', '<ExcThread(monitor, started 139657027249920)>']
[2025-10-11 08:26:03] 2025-10-11 12:25:58,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:26:03] 2025-10-11 12:25:58,171 | INFO     | [monitor] control thread has ended
[2025-10-11 08:26:03] 2025-10-11 12:26:02,931 | INFO     | all workflow threads have been joined
[2025-10-11 08:26:03] 2025-10-11 12:26:02,932 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:26:03] 2025-10-11 12:26:02,932 | INFO     | traces error code: 0
[2025-10-11 08:26:03] 2025-10-11 12:26:02,932 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:26:03] 2025-10-11 12:26:03,085 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:26:03] 2025-10-11 12:26:03,088 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:26:03] 2025-10-11 12:26:03,091 [wrapper] pilotpid: 3129024
[2025-10-11 08:26:03] 2025-10-11 12:26:03,095 [wrapper] Pilot exit status: 0
[2025-10-11 08:26:03] 2025-10-11 12:26:03,108 [wrapper] pandaids: 6837932448
[2025-10-11 08:26:03] 2025-10-11 12:26:03,195 [wrapper] cleanup supervisor_pilot 2204010 3129025
[2025-10-11 08:26:03] 2025-10-11 12:26:03,198 [wrapper] Test setup, not cleaning
[2025-10-11 08:26:03] 2025-10-11 12:26:03,201 [wrapper] apfmon messages muted
[2025-10-11 08:26:03] 2025-10-11 12:26:03,204 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:26:03] 2025-10-11 12:26:03,207 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:26:03]  *** Error codes and diagnostics ***
[2025-10-11 08:26:03]     "exeErrorCode": 0,
[2025-10-11 08:26:03]     "exeErrorDiag": "",
[2025-10-11 08:26:03]     "pilotErrorCode": 0,
[2025-10-11 08:26:03]     "pilotErrorDiag": "",
[2025-10-11 08:26:03]  *** Listing of results directory ***
[2025-10-11 08:26:03] total 415944
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:59 queuedata.json
[2025-10-11 08:26:03] -rwx------. 1 boincer umatlas     36292 Oct 10 21:59 runpilot2-wrapper.sh
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:26:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:04 run_atlas
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:04 job.xml
[2025-10-11 08:26:03] -rw-r--r--. 2 boincer umatlas 221059563 Oct 11 00:04 EVNT.46676267._001975.pool.root.1
[2025-10-11 08:26:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:04 start_atlas.sh
[2025-10-11 08:26:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:04 shared
[2025-10-11 08:26:03] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 00:04 input.tar.gz
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:04 boinc_lockfile
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 00:04 pandaJob.out
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas    975509 Oct 11 00:04 agis_schedconf.cvmfs.json
[2025-10-11 08:26:03] drwx------. 5 boincer umatlas      4096 Oct 11 00:05 pilot3
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas      6523 Oct 11 08:19 init_data.xml
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas 192562000 Oct 11 08:24 HITS.46676269._048966.pool.root.1
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas       531 Oct 11 08:24 boinc_task_state.xml
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas      1045 Oct 11 08:24 memory_monitor_summary.json
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas   1560580 Oct 11 08:24 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas    648979 Oct 11 08:24 log.46676269._048966.job.log.tgz.1
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas      7822 Oct 11 08:25 heartbeat.json
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas        95 Oct 11 08:25 pilot_heartbeat.json
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 08:25 boinc_mmap_file
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas        28 Oct 11 08:25 wrapper_checkpoint.txt
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas      4824 Oct 11 08:26 pilotlog.txt
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas   3551842 Oct 11 08:26 log.46676269._048966.job.log.1
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas       357 Oct 11 08:26 output.list
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas       620 Oct 11 08:26 runtime_log
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas   4218880 Oct 11 08:26 result.tar.gz
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 08:26 runtime_log.err
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas       658 Oct 11 08:26 GKDNDmc4dR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzwQMDmuXmKom.diag
[2025-10-11 08:26:03] -rw-r--r--. 1 boincer umatlas     20989 Oct 11 08:26 stderr.txt
[2025-10-11 08:26:03] HITS file was successfully produced:
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas 192562000 Oct 11 08:24 shared/HITS.pool.root.1
[2025-10-11 08:26:03]  *** Contents of shared directory: ***
[2025-10-11 08:26:03] total 408632
[2025-10-11 08:26:03] -rw-r--r--. 2 boincer umatlas 221059563 Oct 11 00:04 ATLAS.root_0
[2025-10-11 08:26:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:04 start_atlas.sh
[2025-10-11 08:26:03] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 00:04 input.tar.gz
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas 192562000 Oct 11 08:24 HITS.pool.root.1
[2025-10-11 08:26:03] -rw-------. 1 boincer umatlas   4218880 Oct 11 08:26 result.tar.gz
08:26:05 (3122615): run_atlas exited; CPU time 79651.989782
08:26:05 (3122615): called boinc_finish(0)

</stderr_txt>
]]>

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