Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:54 (1989330): wrapper (7.7.26015): starting
00:04:54 (1989330): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 00:04:54] Arguments: --nthreads 12
[2025-10-11 00:04:54] Threads: 12
[2025-10-11 00:04:54] Checking for CVMFS
[2025-10-11 00:04:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:04:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:04:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:04:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:04:55] 2.13.2.0 2984399 24825 143228 151571 0 67 37199562 40960001 9242 16776704 0 30681233 99.740 19920826 31144 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:04:55] CVMFS is ok
[2025-10-11 00:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:04:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:04:55] Further information can be found at the LHC@home message board.
[2025-10-11 00:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:04:55] Checking for apptainer binary...
[2025-10-11 00:04:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:04:55] Running /usr/bin/apptainer --version
[2025-10-11 00:04:55] apptainer version 1.4.3-1.el9
[2025-10-11 00:04:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:04:55] c-211-10.aglt2.org
[2025-10-11 00:04:55] apptainer works
[2025-10-11 00:04:55] Set ATHENA_PROC_NUMBER=12
[2025-10-11 00:04:55] Set ATHENA_CORE_NUMBER=12
[2025-10-11 00:04:55] Starting ATLAS job with PandaID=6837707441
[2025-10-11 00:04:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:20:03 (1989330): BOINC client no longer exists - exiting
05:20:03 (1989330): timer handler: client dead, exiting
05:27:16 (2479756): wrapper (7.7.26015): starting
05:27:16 (2479756): wrapper: running run_atlas (--nthreads 11)
[2025-10-11 05:27:16] Arguments: --nthreads 11
[2025-10-11 05:27:16] Threads: 11
[2025-10-11 05:27:16] This job has been restarted, cleaning up previous attempt
[2025-10-11 05:27:16] Checking for CVMFS
[2025-10-11 05:27:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 05:27:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 05:27:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 05:27:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 05:27:17] 2.13.2.0 2984399 25147 137960 151579 2 17 37528836 40960001 8060 16776704 0 31035381 99.743 19931086 31141 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 05:27:17] CVMFS is ok
[2025-10-11 05:27:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 05:27:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 05:27:17] Further information can be found at the LHC@home message board.
[2025-10-11 05:27:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 05:27:17] Checking for apptainer binary...
[2025-10-11 05:27:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 05:27:17] Running /usr/bin/apptainer --version
[2025-10-11 05:27:18] apptainer version 1.4.3-1.el9
[2025-10-11 05:27:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 05:27:18] c-211-10.aglt2.org
[2025-10-11 05:27:18] apptainer works
[2025-10-11 05:27:19] Set ATHENA_PROC_NUMBER=11
[2025-10-11 05:27:19] Set ATHENA_CORE_NUMBER=11
[2025-10-11 05:27:19] Starting ATLAS job with PandaID=6837707441
[2025-10-11 05:27:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:00:04 (2479756): BOINC client no longer exists - exiting
07:00:04 (2479756): timer handler: client dead, exiting
07:04:04 (2668056): wrapper (7.7.26015): starting
07:04:04 (2668056): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 07:04:04] Arguments: --nthreads 8
[2025-10-11 07:04:04] Threads: 8
[2025-10-11 07:04:04] This job has been restarted, cleaning up previous attempt
[2025-10-11 07:04:04] Checking for CVMFS
[2025-10-11 07:04:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 07:04:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 07:04:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 07:04:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 07:04:04] 2.13.2.0 2984399 25244 150992 151581 1 453 37633156 40960000 6322 16776704 0 31238327 99.744 19934177 31138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 07:04:04] CVMFS is ok
[2025-10-11 07:04:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 07:04:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 07:04:04] Further information can be found at the LHC@home message board.
[2025-10-11 07:04:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 07:04:04] Checking for apptainer binary...
[2025-10-11 07:04:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 07:04:04] Running /usr/bin/apptainer --version
[2025-10-11 07:04:04] apptainer version 1.4.3-1.el9
[2025-10-11 07:04:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 07:04:04] c-211-10.aglt2.org
[2025-10-11 07:04:04] apptainer works
[2025-10-11 07:04:04] Set ATHENA_PROC_NUMBER=8
[2025-10-11 07:04:04] Set ATHENA_CORE_NUMBER=8
[2025-10-11 07:04:04] Starting ATLAS job with PandaID=6837707441
[2025-10-11 07:04:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:54:20]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:54:20] 2025-10-11 17:53:47,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:54:20] 2025-10-11 17:53:47,405 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:54:20] 2025-10-11 17:53:47,406 | INFO     | sum of square deviations: 20294789349.647446
[2025-10-11 13:54:20] 2025-10-11 17:53:47,411 | INFO     | sum of deviations: 63266691081.94785
[2025-10-11 13:54:20] 2025-10-11 17:53:47,412 | INFO     | mean x: 1760192940.3672457
[2025-10-11 13:54:20] 2025-10-11 17:53:47,412 | INFO     | mean y: 2502223.223325062
[2025-10-11 13:54:20] 2025-10-11 17:53:47,412 | INFO     | -- intersect: -5484698510.140017
[2025-10-11 13:54:20] 2025-10-11 17:53:47,412 | INFO     | intersect: -5484698510.140017
[2025-10-11 13:54:20] 2025-10-11 17:53:47,413 | INFO     | chi2: 2.0662563683217816
[2025-10-11 13:54:20] 2025-10-11 17:53:47,414 | INFO     | sum of square deviations: 19548764686.464844
[2025-10-11 13:54:20] 2025-10-11 17:53:47,419 | INFO     | sum of deviations: 87217212113.39455
[2025-10-11 13:54:20] 2025-10-11 17:53:47,419 | INFO     | mean x: 1760192787.8718593
[2025-10-11 13:54:20] 2025-10-11 17:53:47,419 | INFO     | mean y: 2507066.6155778896
[2025-10-11 13:54:20] 2025-10-11 17:53:47,419 | INFO     | -- intersect: -7850628934.687905
[2025-10-11 13:54:20] 2025-10-11 17:53:47,420 | INFO     | intersect: -7850628934.687905
[2025-10-11 13:54:20] 2025-10-11 17:53:47,420 | INFO     | chi2: 1.3787505474847577
[2025-10-11 13:54:20] 2025-10-11 17:53:47,421 | INFO     | current chi2=1.3787505474847577 (change=33.27301642609905 %)
[2025-10-11 13:54:20] 2025-10-11 17:53:47,421 | INFO     | sum of square deviations: 18821227842.015278
[2025-10-11 13:54:20] 2025-10-11 17:53:47,426 | INFO     | sum of deviations: 85753368246.41223
[2025-10-11 13:54:20] 2025-10-11 17:53:47,426 | INFO     | mean x: 1760192635.3740458
[2025-10-11 13:54:20] 2025-10-11 17:53:47,427 | INFO     | mean y: 2506759.765903308
[2025-10-11 13:54:20] 2025-10-11 17:53:47,427 | INFO     | -- intersect: -8017291338.044661
[2025-10-11 13:54:20] 2025-10-11 17:53:47,427 | INFO     | intersect: -8017291338.044661
[2025-10-11 13:54:20] 2025-10-11 17:53:47,428 | INFO     | chi2: 1.3788243071980884
[2025-10-11 13:54:20] 2025-10-11 17:53:47,428 | INFO     | current chi2=1.3788243071980884 (change=-0.00534975042912861 %)
[2025-10-11 13:54:20] 2025-10-11 17:53:47,428 | INFO     | right removable region: 392
[2025-10-11 13:54:20] 2025-10-11 17:53:47,429 | INFO     | sum of square deviations: 19548674406.464863
[2025-10-11 13:54:20] 2025-10-11 17:53:47,434 | INFO     | sum of deviations: -716919642.055275
[2025-10-11 13:54:20] 2025-10-11 17:53:47,434 | INFO     | mean x: 1760193092.8718593
[2025-10-11 13:54:20] 2025-10-11 17:53:47,434 | INFO     | mean y: 2515238.1557788947
[2025-10-11 13:54:20] 2025-10-11 17:53:47,434 | INFO     | -- intersect: 67067799.411417656
[2025-10-11 13:54:20] 2025-10-11 17:53:47,434 | INFO     | intersect: 67067799.411417656
[2025-10-11 13:54:20] 2025-10-11 17:53:47,435 | INFO     | chi2: 0.6980779367589384
[2025-10-11 13:54:20] 2025-10-11 17:53:47,435 | INFO     | current chi2=0.6980779367589384 (change=66.21532799795222 %)
[2025-10-11 13:54:20] 2025-10-11 17:53:47,436 | INFO     | sum of square deviations: 18821071438.264675
[2025-10-11 13:54:20] 2025-10-11 17:53:47,441 | INFO     | sum of deviations: -1685758634.3078842
[2025-10-11 13:54:20] 2025-10-11 17:53:47,441 | INFO     | mean x: 1760193245.3765903
[2025-10-11 13:54:20] 2025-10-11 17:53:47,441 | INFO     | mean y: 2515440.292620865
[2025-10-11 13:54:20] 2025-10-11 17:53:47,441 | INFO     | -- intersect: 160171765.60741326
[2025-10-11 13:54:20] 2025-10-11 17:53:47,442 | INFO     | intersect: 160171765.60741326
[2025-10-11 13:54:20] 2025-10-11 17:53:47,442 | INFO     | chi2: 0.697988745780705
[2025-10-11 13:54:20] 2025-10-11 17:53:47,442 | INFO     | current chi2=0.697988745780705 (change=0.0127766505051633 %)
[2025-10-11 13:54:20] 2025-10-11 17:53:47,443 | INFO     | left removable region: 20
[2025-10-11 13:54:20] 2025-10-11 17:53:47,443 | INFO     | sum of square deviations: 15962402319.061806
[2025-10-11 13:54:20] 2025-10-11 17:53:47,448 | INFO     | sum of deviations: 18737192876.06183
[2025-10-11 13:54:20] 2025-10-11 17:53:47,448 | INFO     | mean x: 1760193214.8736558
[2025-10-11 13:54:20] 2025-10-11 17:53:47,448 | INFO     | mean y: 2521103.873655914
[2025-10-11 13:54:20] 2025-10-11 17:53:47,449 | INFO     | -- intersect: -2063651587.8669884
[2025-10-11 13:54:20] 2025-10-11 17:53:47,449 | INFO     | intersect: -2063651587.8669884
[2025-10-11 13:54:20] 2025-10-11 17:53:47,449 | INFO     | chi2: 0.0016546601741966804
[2025-10-11 13:54:20] 2025-10-11 17:53:47,450 | INFO     | -- intersect: -2063651587.8669884
[2025-10-11 13:54:20] 2025-10-11 17:53:47,450 | INFO     | current memory leak: 1.17 B/s (using 372 data points, chi2=0.00)
[2025-10-11 13:54:20] 2025-10-11 17:53:47,451 | INFO     | could have reported an average CPU frequency of 2457 MHz (17 samples)
[2025-10-11 13:54:20] 2025-10-11 17:53:47,451 | INFO     | ..............................
[2025-10-11 13:54:20] 2025-10-11 17:53:47,451 | INFO     | . Timing measurements:
[2025-10-11 13:54:20] 2025-10-11 17:53:47,452 | INFO     | . get job = 0 s
[2025-10-11 13:54:20] 2025-10-11 17:53:47,452 | INFO     | . initial setup = 2 s
[2025-10-11 13:54:20] 2025-10-11 17:53:47,452 | INFO     | . payload setup = 4 s
[2025-10-11 13:54:20] 2025-10-11 17:53:47,452 | INFO     | . stage-in = 0 s
[2025-10-11 13:54:20] 2025-10-11 17:53:47,452 | INFO     | . payload execution = 24533 s
[2025-10-11 13:54:20] 2025-10-11 17:53:47,452 | INFO     | . stage-out = 2 s
[2025-10-11 13:54:20] 2025-10-11 17:53:47,452 | INFO     | . log creation = 0 s
[2025-10-11 13:54:20] 2025-10-11 17:53:47,453 | INFO     | ..............................
[2025-10-11 13:54:20] 2025-10-11 17:53:48,071 | INFO     | 
[2025-10-11 13:54:20] 2025-10-11 17:53:48,075 | INFO     | job summary report
[2025-10-11 13:54:20] 2025-10-11 17:53:48,075 | INFO     | --------------------------------------------------
[2025-10-11 13:54:20] 2025-10-11 17:53:48,075 | INFO     | PanDA job id: 6837707441
[2025-10-11 13:54:20] 2025-10-11 17:53:48,075 | INFO     | task id: 46676269
[2025-10-11 13:54:20] 2025-10-11 17:53:48,078 | INFO     | errors: (none)
[2025-10-11 13:54:20] 2025-10-11 17:53:48,078 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:54:20] 2025-10-11 17:53:48,078 | INFO     | pilot state: finished 
[2025-10-11 13:54:20] 2025-10-11 17:53:48,078 | INFO     | transexitcode: 0
[2025-10-11 13:54:20] 2025-10-11 17:53:48,078 | INFO     | exeerrorcode: 0
[2025-10-11 13:54:20] 2025-10-11 17:53:48,078 | INFO     | exeerrordiag: 
[2025-10-11 13:54:20] 2025-10-11 17:53:48,078 | INFO     | exitcode: 0
[2025-10-11 13:54:20] 2025-10-11 17:53:48,079 | INFO     | exitmsg: OK
[2025-10-11 13:54:20] 2025-10-11 17:53:48,079 | INFO     | cpuconsumptiontime: 64146 s
[2025-10-11 13:54:20] 2025-10-11 17:53:48,079 | INFO     | nevents: 400
[2025-10-11 13:54:20] 2025-10-11 17:53:48,079 | INFO     | neventsw: 0
[2025-10-11 13:54:20] 2025-10-11 17:53:48,079 | INFO     | pid: 2708080
[2025-10-11 13:54:20] 2025-10-11 17:53:48,079 | INFO     | pgrp: 2708080
[2025-10-11 13:54:20] 2025-10-11 17:53:48,079 | INFO     | corecount: 8
[2025-10-11 13:54:20] 2025-10-11 17:53:48,079 | INFO     | event service: False
[2025-10-11 13:54:20] 2025-10-11 17:53:48,080 | INFO     | sizes: {0: 2348029, 1: 2348885, 5: 2349147, 12: 2349203, 24542: 2384704, 24543: 2384703, 24545: 2393885, 24546: 2393941, 24557: 2394199}
[2025-10-11 13:54:20] 2025-10-11 17:53:48,080 | INFO     | --------------------------------------------------
[2025-10-11 13:54:20] 2025-10-11 17:53:48,080 | INFO     | 
[2025-10-11 13:54:20] 2025-10-11 17:53:48,080 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 13:54:20] 2025-10-11 17:53:48,136 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,137 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,137 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,137 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:54:20] 2025-10-11 17:53:48,140 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,140 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:54:20] 2025-10-11 17:53:48,141 | INFO     | job 6837707441 has completed (purged errors)
[2025-10-11 13:54:20] 2025-10-11 17:53:48,141 | INFO     | overall cleanup function is called
[2025-10-11 13:54:20] 2025-10-11 17:53:49,152 | INFO     | --- collectZombieJob: --- 10, [2708080]
[2025-10-11 13:54:20] 2025-10-11 17:53:49,153 | INFO     | zombie collector waiting for pid 2708080
[2025-10-11 13:54:20] 2025-10-11 17:53:49,153 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:54:20] 2025-10-11 17:53:49,153 | INFO     | collected zombie processes
[2025-10-11 13:54:20] 2025-10-11 17:53:49,153 | INFO     | will attempt to kill all subprocesses of pid=2708080
[2025-10-11 13:54:20] 2025-10-11 17:53:49,516 | INFO     | process IDs to be killed: [2708080] (in reverse order)
[2025-10-11 13:54:20] 2025-10-11 17:53:49,606 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:54:20] 2025-10-11 17:53:49,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:54:20] 2025-10-11 17:53:49,616 | INFO     | did not find any defunct processes belonging to 2708080
[2025-10-11 13:54:20] 2025-10-11 17:53:49,627 | INFO     | did not find any defunct processes belonging to 2708080
[2025-10-11 13:54:20] 2025-10-11 17:53:49,628 | INFO     | ready for new job
[2025-10-11 13:54:20] 2025-10-11 17:53:49,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:54:20] 2025-10-11 17:53:49,631 | INFO     | ***************************************
[2025-10-11 13:54:20] 2025-10-11 17:53:49,632 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 13:54:20] 2025-10-11 17:53:49,632 | INFO     | ***************************************
[2025-10-11 13:54:20] 2025-10-11 17:53:49,632 | INFO     | 
[2025-10-11 13:54:20] 2025-10-11 17:53:49,636 | INFO     | architecture information:
[2025-10-11 13:54:20] 2025-10-11 17:53:49,636 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:54:20] 2025-10-11 17:53:49,664 | INFO     | cat /etc/os-release:
[2025-10-11 13:54:20] NAME="CentOS Linux"
[2025-10-11 13:54:20] VERSION="7 (Core)"
[2025-10-11 13:54:20] ID="centos"
[2025-10-11 13:54:20] ID_LIKE="rhel fedora"
[2025-10-11 13:54:20] VERSION_ID="7"
[2025-10-11 13:54:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:54:20] ANSI_COLOR="0;31"
[2025-10-11 13:54:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:54:20] HOME_URL="https://www.centos.org/"
[2025-10-11 13:54:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:54:20] 
[2025-10-11 13:54:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:54:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:54:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:54:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:54:20] 
[2025-10-11 13:54:20] 2025-10-11 17:53:49,665 | INFO     | ***************************************
[2025-10-11 13:54:20] 2025-10-11 17:53:50,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 13:54:20] 2025-10-11 17:53:50,284 | INFO     | sufficient remaining disk space (63411585024 B)
[2025-10-11 13:54:20] 2025-10-11 17:53:50,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:54:20] 2025-10-11 17:53:50,285 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:54:20] 2025-10-11 17:53:50,285 | INFO     | update_server=False
[2025-10-11 13:54:20] 2025-10-11 17:53:50,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:54:20] 2025-10-11 17:53:50,436 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 13:54:20] 2025-10-11 17:53:50,437 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 13:54:20] 2025-10-11 17:53:50,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:54:20] 2025-10-11 17:53:50,437 | INFO     | will abort loop
[2025-10-11 13:54:20] 2025-10-11 17:53:50,548 | INFO     | all job control threads have been joined
[2025-10-11 13:54:20] 2025-10-11 17:53:50,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:54:20] 2025-10-11 17:53:51,070 | INFO     | all data control threads have been joined
[2025-10-11 13:54:20] 2025-10-11 17:53:51,291 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:51,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:54:20] 2025-10-11 17:53:51,308 | INFO     | all payload control threads have been joined
[2025-10-11 13:54:20] 2025-10-11 17:53:51,440 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:51,443 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:51,518 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:51,556 | INFO     | [job] control thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:51,600 | INFO     | [job] validate thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:51,805 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:51,986 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:52,000 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:52,076 | INFO     | [data] control thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:52,315 | INFO     | [payload] control thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:52,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:54:20] 2025-10-11 17:53:52,629 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:52,679 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:53,304 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:53,597 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:54,911 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:54:20] 2025-10-11 17:53:57,799 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:54:20] 2025-10-11 17:53:58,013 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202873386816)>', '<ExcThread(monitor, started 140202001549056)>']
[2025-10-11 13:54:20] 2025-10-11 17:54:03,039 | INFO     | all workflow threads have been joined
[2025-10-11 13:54:20] 2025-10-11 17:54:03,064 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:54:20] 2025-10-11 17:54:03,065 | INFO     | traces error code: 0
[2025-10-11 13:54:20] 2025-10-11 17:54:03,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:54:20] 2025-10-11 17:54:19,792 | INFO     | PID=2679421 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:54:20] 2025-10-11 17:54:19,792 | INFO     | .. there are 8 such processes running
[2025-10-11 13:54:20] 2025-10-11 17:54:19,794 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:54:20] 2025-10-11 17:54:19,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:54:20] 2025-10-11 17:54:19,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:54:20] 2025-10-11 17:54:19,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:54:20] 2025-10-11 17:54:19,795 | INFO     | [monitor] control thread has ended
[2025-10-11 13:54:20] 2025-10-11 17:54:20,026 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:54:20] 2025-10-11 17:54:20,030 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:54:20] 2025-10-11 17:54:20,033 [wrapper] pilotpid: 2679421
[2025-10-11 13:54:20] 2025-10-11 17:54:20,037 [wrapper] Pilot exit status: 0
[2025-10-11 13:54:20] 2025-10-11 17:54:20,052 [wrapper] pandaids: 6837707441 6837707441 6837707441
[2025-10-11 13:54:20] 2025-10-11 17:54:20,133 [wrapper] cleanup supervisor_pilot 3252601 2679422
[2025-10-11 13:54:20] 2025-10-11 17:54:20,138 [wrapper] Test setup, not cleaning
[2025-10-11 13:54:20] 2025-10-11 17:54:20,149 [wrapper] apfmon messages muted
[2025-10-11 13:54:20] 2025-10-11 17:54:20,153 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:54:20] 2025-10-11 17:54:20,157 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:54:20]  *** Error codes and diagnostics ***
[2025-10-11 13:54:20]     "exeErrorCode": 0,
[2025-10-11 13:54:20]     "exeErrorDiag": "",
[2025-10-11 13:54:20]     "pilotErrorCode": 0,
[2025-10-11 13:54:20]     "pilotErrorDiag": "",
[2025-10-11 13:54:20]  *** Listing of results directory ***
[2025-10-11 13:54:20] total 631892
[2025-10-11 13:54:20] drwx------. 4 boincer umatlas      4096 Jul 31 08:57 pilot3
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 15:12 queuedata.json
[2025-10-11 13:54:20] -rwx------. 1 boincer umatlas     36292 Oct 10 15:14 runpilot2-wrapper.sh
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:54:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:04 run_atlas
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:04 job.xml
[2025-10-11 13:54:20] -rw-r--r--. 3 boincer umatlas 221706643 Oct 11 00:04 EVNT.46676267._001769.pool.root.1
[2025-10-11 13:54:20] -rw-r--r--. 3 boincer umatlas 221706643 Oct 11 00:04 ATLAS.root_0
[2025-10-11 13:54:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:04 start_atlas.sh
[2025-10-11 13:54:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:04 shared
[2025-10-11 13:54:20] -rw-r--r--. 2 boincer umatlas    576711 Oct 11 00:04 input.tar.gz
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:04 boinc_lockfile
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 07:04 pandaJob.out
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas    975517 Oct 11 07:04 agis_schedconf.cvmfs.json
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas      6616 Oct 11 13:45 init_data.xml
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas 192211093 Oct 11 13:52 HITS.46676269._043691.pool.root.1
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas       533 Oct 11 13:52 boinc_task_state.xml
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas      1050 Oct 11 13:53 memory_monitor_summary.json
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas   1560580 Oct 11 13:53 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas    582077 Oct 11 13:53 log.46676269._043691.job.log.tgz.1
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas      7838 Oct 11 13:53 heartbeat.json
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas        29 Oct 11 13:54 wrapper_checkpoint.txt
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas        97 Oct 11 13:54 pilot_heartbeat.json
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas       822 Oct 11 13:54 pilotlog.txt
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas   3176658 Oct 11 13:54 log.46676269._043691.job.log.1
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas       357 Oct 11 13:54 output.list
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 13:54 boinc_mmap_file
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas       620 Oct 11 13:54 runtime_log
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas   3778560 Oct 11 13:54 result.tar.gz
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas      1412 Oct 11 13:54 vD9LDmKkXR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVCeNDmgFwGfn.diag
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas      8789 Oct 11 13:54 runtime_log.err
[2025-10-11 13:54:20] -rw-r--r--. 1 boincer umatlas     25610 Oct 11 13:54 stderr.txt
[2025-10-11 13:54:20] HITS file was successfully produced:
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas 192211093 Oct 11 13:52 shared/HITS.pool.root.1
[2025-10-11 13:54:20]  *** Contents of shared directory: ***
[2025-10-11 13:54:20] total 408496
[2025-10-11 13:54:20] -rw-r--r--. 3 boincer umatlas 221706643 Oct 11 00:04 ATLAS.root_0
[2025-10-11 13:54:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:04 start_atlas.sh
[2025-10-11 13:54:20] -rw-r--r--. 2 boincer umatlas    576711 Oct 11 00:04 input.tar.gz
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas 192211093 Oct 11 13:52 HITS.pool.root.1
[2025-10-11 13:54:20] -rw-------. 1 boincer umatlas   3778560 Oct 11 13:54 result.tar.gz
13:54:42 (2668056): run_atlas exited; CPU time 64995.671382
13:54:42 (2668056): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN