Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:20 (3142662): wrapper (7.7.26015): starting
00:05:20 (3142662): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:05:20] Arguments: --nthreads 9
[2025-10-11 00:05:20] Threads: 9
[2025-10-11 00:05:20] Checking for CVMFS
[2025-10-11 00:05:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:05:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:05:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:05:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:05:23] 2.13.2.0 4177459 127318 173584 151571 0 69 27928092 32935937 26423 16776704 0 105419212 99.669 90169566 29787 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:05:23] CVMFS is ok
[2025-10-11 00:05:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:05:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:05:23] Further information can be found at the LHC@home message board.
[2025-10-11 00:05:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:05:23] Checking for apptainer binary...
[2025-10-11 00:05:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:05:23] Running /usr/bin/apptainer --version
[2025-10-11 00:05:23] apptainer version 1.4.3-1.el9
[2025-10-11 00:05:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:05:24] c-8-1.aglt2.org
[2025-10-11 00:05:24] apptainer works
[2025-10-11 00:05:24] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:05:24] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:05:24] Starting ATLAS job with PandaID=6837873801
[2025-10-11 00:05:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:00:37]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:00:37] 2025-10-11 20:59:34,318 | INFO     | sum of deviations: 1370456727521.6545
[2025-10-11 17:00:37] 2025-10-11 20:59:34,318 | INFO     | mean x: 1760185919.272543
[2025-10-11 17:00:37] 2025-10-11 20:59:34,319 | INFO     | mean y: 2504243.610942249
[2025-10-11 17:00:37] 2025-10-11 20:59:34,319 | INFO     | -- intersect: -8088867661.85387
[2025-10-11 17:00:37] 2025-10-11 20:59:34,319 | INFO     | intersect: -8088867661.85387
[2025-10-11 17:00:37] 2025-10-11 20:59:34,339 | INFO     | chi2: 7.630488811860685
[2025-10-11 17:00:37] 2025-10-11 20:59:34,340 | INFO     | current chi2=7.630488811860685 (change=9.77084309670416 %)
[2025-10-11 17:00:37] 2025-10-11 20:59:34,340 | INFO     | right removable region: 986
[2025-10-11 17:00:37] 2025-10-11 20:59:34,341 | INFO     | sum of square deviations: 298126805575.0418
[2025-10-11 17:00:37] 2025-10-11 20:59:34,458 | INFO     | sum of deviations: 982710115842.2935
[2025-10-11 17:00:37] 2025-10-11 20:59:34,458 | INFO     | mean x: 1760186224.2755826
[2025-10-11 17:00:37] 2025-10-11 20:59:34,458 | INFO     | mean y: 2513090.4437689967
[2025-10-11 17:00:37] 2025-10-11 20:59:34,459 | INFO     | -- intersect: -5799557625.82555
[2025-10-11 17:00:37] 2025-10-11 20:59:34,459 | INFO     | intersect: -5799557625.82555
[2025-10-11 17:00:37] 2025-10-11 20:59:34,460 | INFO     | chi2: 4.614338955972414
[2025-10-11 17:00:37] 2025-10-11 20:59:34,460 | INFO     | current chi2=4.614338955972414 (change=45.436272311118245 %)
[2025-10-11 17:00:37] 2025-10-11 20:59:34,468 | INFO     | sum of square deviations: 293618354770.4889
[2025-10-11 17:00:37] 2025-10-11 20:59:34,546 | INFO     | sum of deviations: 735522890092.3474
[2025-10-11 17:00:37] 2025-10-11 20:59:34,547 | INFO     | mean x: 1760186376.7800407
[2025-10-11 17:00:37] 2025-10-11 20:59:34,547 | INFO     | mean y: 2521450.2932790224
[2025-10-11 17:00:37] 2025-10-11 20:59:34,547 | INFO     | -- intersect: -4406798845.648102
[2025-10-11 17:00:37] 2025-10-11 20:59:34,547 | INFO     | intersect: -4406798845.648102
[2025-10-11 17:00:37] 2025-10-11 20:59:34,557 | INFO     | chi2: 2.493744678404931
[2025-10-11 17:00:37] 2025-10-11 20:59:34,557 | INFO     | current chi2=2.493744678404931 (change=45.95662125823599 %)
[2025-10-11 17:00:37] 2025-10-11 20:59:34,558 | INFO     | sum of square deviations: 289155519459.32623
[2025-10-11 17:00:37] 2025-10-11 20:59:34,659 | INFO     | sum of deviations: 590836088419.6141
[2025-10-11 17:00:37] 2025-10-11 20:59:34,660 | INFO     | mean x: 1760186529.285568
[2025-10-11 17:00:37] 2025-10-11 20:59:34,660 | INFO     | mean y: 2526391.3060388947
[2025-10-11 17:00:37] 2025-10-11 20:59:34,660 | INFO     | -- intersect: -3594090840.129066
[2025-10-11 17:00:37] 2025-10-11 20:59:34,660 | INFO     | intersect: -3594090840.129066
[2025-10-11 17:00:37] 2025-10-11 20:59:34,668 | INFO     | monitor loop #2691: job 0:6837873801 is in state 'finished'
[2025-10-11 17:00:37] 2025-10-11 20:59:34,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:00:37] 2025-10-11 20:59:34,673 | INFO     | chi2: 1.768152265684152
[2025-10-11 17:00:37] 2025-10-11 20:59:34,673 | INFO     | current chi2=1.768152265684152 (change=29.09649969398183 %)
[2025-10-11 17:00:37] 2025-10-11 20:59:34,674 | INFO     | sum of square deviations: 284738186947.1848
[2025-10-11 17:00:37] 2025-10-11 20:59:34,757 | INFO     | sum of deviations: 482879741926.0124
[2025-10-11 17:00:37] 2025-10-11 20:59:34,757 | INFO     | mean x: 1760186681.7901235
[2025-10-11 17:00:37] 2025-10-11 20:59:34,757 | INFO     | mean y: 2530118.230452675
[2025-10-11 17:00:37] 2025-10-11 20:59:34,757 | INFO     | -- intersect: -2982522570.8985786
[2025-10-11 17:00:37] 2025-10-11 20:59:34,757 | INFO     | intersect: -2982522570.8985786
[2025-10-11 17:00:37] 2025-10-11 20:59:34,759 | INFO     | chi2: 1.3978797122307318
[2025-10-11 17:00:37] 2025-10-11 20:59:34,759 | INFO     | current chi2=1.3978797122307318 (change=20.941214206467134 %)
[2025-10-11 17:00:37] 2025-10-11 20:59:34,759 | INFO     | left removable region: 40
[2025-10-11 17:00:37] 2025-10-11 20:59:34,760 | INFO     | sum of square deviations: 262493018038.2156
[2025-10-11 17:00:37] 2025-10-11 20:59:34,865 | INFO     | sum of deviations: 306007016415.298
[2025-10-11 17:00:37] 2025-10-11 20:59:34,865 | INFO     | mean x: 1760187108.794926
[2025-10-11 17:00:37] 2025-10-11 20:59:34,866 | INFO     | mean y: 2540938.687103594
[2025-10-11 17:00:37] 2025-10-11 20:59:34,866 | INFO     | -- intersect: -2049435946.3384144
[2025-10-11 17:00:37] 2025-10-11 20:59:34,866 | INFO     | intersect: -2049435946.3384144
[2025-10-11 17:00:37] 2025-10-11 20:59:34,871 | INFO     | chi2: 0.07616178742363806
[2025-10-11 17:00:37] 2025-10-11 20:59:34,871 | INFO     | -- intersect: -2049435946.3384144
[2025-10-11 17:00:37] 2025-10-11 20:59:34,871 | INFO     | current memory leak: 1.17 B/s (using 946 data points, chi2=0.08)
[2025-10-11 17:00:37] 2025-10-11 20:59:34,872 | INFO     | could have reported an average CPU frequency of 2602 MHz (36 samples)
[2025-10-11 17:00:37] 2025-10-11 20:59:34,872 | INFO     | ..............................
[2025-10-11 17:00:37] 2025-10-11 20:59:34,873 | INFO     | . Timing measurements:
[2025-10-11 17:00:37] 2025-10-11 20:59:34,873 | INFO     | . get job = 0 s
[2025-10-11 17:00:37] 2025-10-11 20:59:34,873 | INFO     | . initial setup = 7 s
[2025-10-11 17:00:37] 2025-10-11 20:59:34,873 | INFO     | . payload setup = 69 s
[2025-10-11 17:00:37] 2025-10-11 20:59:34,873 | INFO     | . stage-in = 1 s
[2025-10-11 17:00:37] 2025-10-11 20:59:34,873 | INFO     | . payload execution = 60553 s
[2025-10-11 17:00:37] 2025-10-11 20:59:34,873 | INFO     | . stage-out = 4 s
[2025-10-11 17:00:37] 2025-10-11 20:59:34,892 | INFO     | . log creation = 0 s
[2025-10-11 17:00:37] 2025-10-11 20:59:34,892 | INFO     | ..............................
[2025-10-11 17:00:37] 2025-10-11 20:59:35,521 | INFO     | 
[2025-10-11 17:00:37] 2025-10-11 20:59:35,522 | INFO     | job summary report
[2025-10-11 17:00:37] 2025-10-11 20:59:35,522 | INFO     | --------------------------------------------------
[2025-10-11 17:00:37] 2025-10-11 20:59:35,522 | INFO     | PanDA job id: 6837873801
[2025-10-11 17:00:37] 2025-10-11 20:59:35,522 | INFO     | task id: 46676269
[2025-10-11 17:00:37] 2025-10-11 20:59:35,522 | INFO     | errors: (none)
[2025-10-11 17:00:37] 2025-10-11 20:59:35,522 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:00:37] 2025-10-11 20:59:35,523 | INFO     | pilot state: finished 
[2025-10-11 17:00:37] 2025-10-11 20:59:35,523 | INFO     | transexitcode: 0
[2025-10-11 17:00:37] 2025-10-11 20:59:35,523 | INFO     | exeerrorcode: 0
[2025-10-11 17:00:37] 2025-10-11 20:59:35,523 | INFO     | exeerrordiag: 
[2025-10-11 17:00:37] 2025-10-11 20:59:35,533 | INFO     | exitcode: 0
[2025-10-11 17:00:37] 2025-10-11 20:59:35,533 | INFO     | exitmsg: OK
[2025-10-11 17:00:37] 2025-10-11 20:59:35,533 | INFO     | cpuconsumptiontime: 50962 s
[2025-10-11 17:00:37] 2025-10-11 20:59:35,533 | INFO     | nevents: 400
[2025-10-11 17:00:37] 2025-10-11 20:59:35,533 | INFO     | neventsw: 0
[2025-10-11 17:00:37] 2025-10-11 20:59:35,533 | INFO     | pid: 3175838
[2025-10-11 17:00:37] 2025-10-11 20:59:35,533 | INFO     | pgrp: 3175838
[2025-10-11 17:00:37] 2025-10-11 20:59:35,534 | INFO     | corecount: 9
[2025-10-11 17:00:37] 2025-10-11 20:59:35,534 | INFO     | event service: False
[2025-10-11 17:00:37] 2025-10-11 20:59:35,534 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 36: 2348997, 48: 2349415, 59: 2349443, 60626: 2399561, 60627: 2399560, 60633: 2408950, 60650:
[2025-10-11 17:00:37] 2025-10-11 20:59:35,534 | INFO     | --------------------------------------------------
[2025-10-11 17:00:37] 2025-10-11 20:59:35,534 | INFO     | 
[2025-10-11 17:00:37] 2025-10-11 20:59:35,534 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 17:00:37] 2025-10-11 20:59:35,572 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,580 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:00:37] 2025-10-11 20:59:35,580 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,580 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:00:37] 2025-10-11 20:59:35,580 | INFO     | job 6837873801 has completed (purged errors)
[2025-10-11 17:00:37] 2025-10-11 20:59:35,581 | INFO     | overall cleanup function is called
[2025-10-11 17:00:37] 2025-10-11 20:59:36,579 | INFO     | PID=3152148 has CPU usage=11.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 17:00:37] 2025-10-11 20:59:36,579 | INFO     | .. there are 40 such processes running
[2025-10-11 17:00:37] 2025-10-11 20:59:36,610 | INFO     | --- collectZombieJob: --- 10, [3175838]
[2025-10-11 17:00:37] 2025-10-11 20:59:36,611 | INFO     | zombie collector waiting for pid 3175838
[2025-10-11 17:00:37] 2025-10-11 20:59:36,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:00:37] 2025-10-11 20:59:36,611 | INFO     | collected zombie processes
[2025-10-11 17:00:37] 2025-10-11 20:59:36,611 | INFO     | will attempt to kill all subprocesses of pid=3175838
[2025-10-11 17:00:37] 2025-10-11 20:59:37,859 | INFO     | process IDs to be killed: [3175838] (in reverse order)
[2025-10-11 17:00:37] 2025-10-11 20:59:37,980 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:00:37] 2025-10-11 20:59:37,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:00:37] 2025-10-11 20:59:37,995 | INFO     | did not find any defunct processes belonging to 3175838
[2025-10-11 17:00:37] 2025-10-11 20:59:38,010 | INFO     | did not find any defunct processes belonging to 3175838
[2025-10-11 17:00:37] 2025-10-11 20:59:38,010 | INFO     | ready for new job
[2025-10-11 17:00:37] 2025-10-11 20:59:38,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:00:37] 2025-10-11 20:59:38,014 | INFO     | ***************************************
[2025-10-11 17:00:37] 2025-10-11 20:59:38,014 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:00:37] 2025-10-11 20:59:38,014 | INFO     | ***************************************
[2025-10-11 17:00:37] 2025-10-11 20:59:38,015 | INFO     | 
[2025-10-11 17:00:37] 2025-10-11 20:59:38,029 | INFO     | architecture information:
[2025-10-11 17:00:37] 2025-10-11 20:59:38,029 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:00:37] 2025-10-11 20:59:38,049 | INFO     | cat /etc/os-release:
[2025-10-11 17:00:37] NAME="CentOS Linux"
[2025-10-11 17:00:37] VERSION="7 (Core)"
[2025-10-11 17:00:37] ID="centos"
[2025-10-11 17:00:37] ID_LIKE="rhel fedora"
[2025-10-11 17:00:37] VERSION_ID="7"
[2025-10-11 17:00:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:00:37] ANSI_COLOR="0;31"
[2025-10-11 17:00:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:00:37] HOME_URL="https://www.centos.org/"
[2025-10-11 17:00:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:00:37] 
[2025-10-11 17:00:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:00:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:00:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:00:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:00:37] 
[2025-10-11 17:00:37] 2025-10-11 20:59:38,050 | INFO     | ***************************************
[2025-10-11 17:00:37] 2025-10-11 20:59:38,554 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 17:00:37] 2025-10-11 20:59:38,573 | INFO     | sufficient remaining disk space (75649515520 B)
[2025-10-11 17:00:37] 2025-10-11 20:59:38,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:00:37] 2025-10-11 20:59:38,574 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:00:37] 2025-10-11 20:59:38,574 | INFO     | update_server=False
[2025-10-11 17:00:37] 2025-10-11 20:59:38,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:00:37] 2025-10-11 20:59:38,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:00:37] 2025-10-11 20:59:38,575 | INFO     | aborting loop
[2025-10-11 17:00:37] 2025-10-11 20:59:38,575 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:00:37] 2025-10-11 20:59:38,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:00:37] 2025-10-11 20:59:39,132 | INFO     | all data control threads have been joined
[2025-10-11 17:00:37] 2025-10-11 20:59:39,389 | INFO     | all payload control threads have been joined
[2025-10-11 17:00:37] 2025-10-11 20:59:39,581 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:39,589 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:39,607 | INFO     | all job control threads have been joined
[2025-10-11 17:00:37] 2025-10-11 20:59:39,687 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:39,778 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:39,882 | INFO     | [job] validate thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:39,893 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:40,138 | INFO     | [data] control thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:40,395 | INFO     | [payload] control thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:40,485 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:40,485 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:40,529 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:40,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:00:37] 2025-10-11 20:59:40,614 | INFO     | [job] control thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:40,687 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:41,050 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:41,546 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:00:37] 2025-10-11 20:59:42,586 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:00:37] 2025-10-11 21:00:09,257 | INFO     | PID=3152148 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:00:37] 2025-10-11 21:00:09,257 | INFO     | .. there are 40 such processes running
[2025-10-11 17:00:37] 2025-10-11 21:00:09,258 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:00:37] 2025-10-11 21:00:09,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:00:37] 2025-10-11 21:00:09,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:00:37] 2025-10-11 21:00:12,856 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:00:37] 2025-10-11 21:00:14,793 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139976535975744)>', '<ExcThread(monitor, started 139975660136192)>']
[2025-10-11 17:00:37] 2025-10-11 21:00:15,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:00:37] 2025-10-11 21:00:15,312 | INFO     | [monitor] control thread has ended
[2025-10-11 17:00:37] 2025-10-11 21:00:19,819 | INFO     | all workflow threads have been joined
[2025-10-11 17:00:37] 2025-10-11 21:00:19,820 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:00:37] 2025-10-11 21:00:19,820 | INFO     | traces error code: 0
[2025-10-11 17:00:37] 2025-10-11 21:00:19,820 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:00:37] 2025-10-11 21:00:20,210 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:00:37] 2025-10-11 21:00:20,289 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:00:37] 2025-10-11 21:00:20,324 [wrapper] pilotpid: 3152148
[2025-10-11 17:00:37] 2025-10-11 21:00:20,361 [wrapper] Pilot exit status: 0
[2025-10-11 17:00:37] 2025-10-11 21:00:20,478 [wrapper] pandaids: 6837873801
[2025-10-11 17:00:37] 2025-10-11 21:00:20,875 [wrapper] cleanup supervisor_pilot 2325469 3152149
[2025-10-11 17:00:37] 2025-10-11 21:00:20,951 [wrapper] Test setup, not cleaning
[2025-10-11 17:00:37] 2025-10-11 21:00:20,991 [wrapper] apfmon messages muted
[2025-10-11 17:00:37] 2025-10-11 21:00:21,049 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:00:37] 2025-10-11 21:00:21,110 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:00:37]  *** Error codes and diagnostics ***
[2025-10-11 17:00:37]     "exeErrorCode": 0,
[2025-10-11 17:00:37]     "exeErrorDiag": "",
[2025-10-11 17:00:37]     "pilotErrorCode": 0,
[2025-10-11 17:00:37]     "pilotErrorDiag": "",
[2025-10-11 17:00:37]  *** Listing of results directory ***
[2025-10-11 17:00:37] total 419272
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 18:56 pilot3.tar.gz
[2025-10-11 17:00:37] -rwx------. 1 boincer umatlas     36292 Oct 10 19:04 runpilot2-wrapper.sh
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 19:04 queuedata.json
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:00:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:05 run_atlas
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:05 job.xml
[2025-10-11 17:00:37] -rw-r--r--. 2 boincer umatlas 220911259 Oct 11 00:05 EVNT.46676267._001884.pool.root.1
[2025-10-11 17:00:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:05 start_atlas.sh
[2025-10-11 17:00:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:05 shared
[2025-10-11 17:00:37] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 00:05 input.tar.gz
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:05 boinc_lockfile
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:05 pandaJob.out
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas    975509 Oct 11 00:06 agis_schedconf.cvmfs.json
[2025-10-11 17:00:37] drwx------. 5 boincer umatlas      4096 Oct 11 00:07 pilot3
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas      6657 Oct 11 16:54 init_data.xml
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas 189907848 Oct 11 16:58 HITS.46676269._046653.pool.root.1
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas       531 Oct 11 16:58 boinc_task_state.xml
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas      1051 Oct 11 16:59 memory_monitor_summary.json
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas   1560580 Oct 11 16:59 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas    991616 Oct 11 16:59 log.46676269._046653.job.log.tgz.1
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas      7839 Oct 11 16:59 heartbeat.json
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas        95 Oct 11 17:00 pilot_heartbeat.json
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas      4824 Oct 11 17:00 pilotlog.txt
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas   6310629 Oct 11 17:00 log.46676269._046653.job.log.1
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas       357 Oct 11 17:00 output.list
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas       620 Oct 11 17:00 runtime_log
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas   7321600 Oct 11 17:00 result.tar.gz
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas      8689 Oct 11 17:00 runtime_log.err
[2025-10-11 17:00:37] -rw-------. 1 boincer umatlas       657 Oct 11 17:00 cMuLDmWLbR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLeeNDm62ekSm.diag
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas        28 Oct 11 17:00 wrapper_checkpoint.txt
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 17:00 boinc_mmap_file
[2025-10-11 17:00:37] -rw-r--r--. 1 boincer umatlas     21225 Oct 11 17:00 stderr.txt
[2025-10-11 17:00:38] HITS file was successfully produced:
[2025-10-11 17:00:38] -rw-------. 1 boincer umatlas 189907848 Oct 11 16:58 shared/HITS.pool.root.1
[2025-10-11 17:00:38]  *** Contents of shared directory: ***
[2025-10-11 17:00:38] total 408932
[2025-10-11 17:00:38] -rw-r--r--. 2 boincer umatlas 220911259 Oct 11 00:05 ATLAS.root_0
[2025-10-11 17:00:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:05 start_atlas.sh
[2025-10-11 17:00:38] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 00:05 input.tar.gz
[2025-10-11 17:00:38] -rw-------. 1 boincer umatlas 189907848 Oct 11 16:58 HITS.pool.root.1
[2025-10-11 17:00:38] -rw-------. 1 boincer umatlas   7321600 Oct 11 17:00 result.tar.gz
17:00:40 (3142662): run_atlas exited; CPU time 52892.577719
17:00:40 (3142662): called boinc_finish(0)

</stderr_txt>
]]>

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