Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:55 (931152): wrapper (7.7.26015): starting
00:04:55 (931152): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 00:04:55] Arguments: --nthreads 12
[2025-10-11 00:04:55] Threads: 12
[2025-10-11 00:04:55] Checking for CVMFS
[2025-10-11 00:04:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:04:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:04:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:04:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:04:59] 2.13.2.0 7655 55344 386924 151571 1 445 32667322 32935936 34783 16776704 10 86554507 99.525 110356661 8831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:04:59] CVMFS is ok
[2025-10-11 00:04:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:04:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:04:59] Further information can be found at the LHC@home message board.
[2025-10-11 00:04:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:04:59] Checking for apptainer binary...
[2025-10-11 00:04:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:04:59] Running /usr/bin/apptainer --version
[2025-10-11 00:05:00] apptainer version 1.4.3-1.el9
[2025-10-11 00:05:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:05:02] c6-12-25-4.aglt2.org
[2025-10-11 00:05:02] apptainer works
[2025-10-11 00:05:02] Set ATHENA_PROC_NUMBER=12
[2025-10-11 00:05:02] Set ATHENA_CORE_NUMBER=12
[2025-10-11 00:05:02] Starting ATLAS job with PandaID=6837873604
[2025-10-11 00:05:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:05:47]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:05:47] 2025-10-11 21:04:07,815 | INFO     | sum of square deviations: 305437151659.4673
[2025-10-11 17:05:47] 2025-10-11 21:04:08,225 | INFO     | time since job start (61013s) is within the limit (172800.0s)
[2025-10-11 17:05:47] 2025-10-11 21:04:08,229 | INFO     | sum of deviations: 1303507534004.4316
[2025-10-11 17:05:47] 2025-10-11 21:04:08,230 | INFO     | mean x: 1760186236.5728643
[2025-10-11 17:05:47] 2025-10-11 21:04:08,230 | INFO     | mean y: 2202584.497487437
[2025-10-11 17:05:47] 2025-10-11 21:04:08,231 | INFO     | -- intersect: -7509706193.324295
[2025-10-11 17:05:47] 2025-10-11 21:04:08,231 | INFO     | intersect: -7509706193.324295
[2025-10-11 17:05:47] 2025-10-11 21:04:08,251 | INFO     | chi2: 15.289305019988529
[2025-10-11 17:05:47] 2025-10-11 21:04:08,291 | INFO     | sum of square deviations: 300855877949.53577
[2025-10-11 17:05:47] 2025-10-11 21:04:08,630 | INFO     | sum of deviations: 1610339167967.2012
[2025-10-11 17:05:47] 2025-10-11 21:04:08,631 | INFO     | mean x: 1760186084.0808082
[2025-10-11 17:05:47] 2025-10-11 21:04:08,631 | INFO     | mean y: 2212798.1474747476
[2025-10-11 17:05:47] 2025-10-11 21:04:08,653 | INFO     | -- intersect: -9419230496.975983
[2025-10-11 17:05:47] 2025-10-11 21:04:08,653 | INFO     | intersect: -9419230496.975983
[2025-10-11 17:05:47] 2025-10-11 21:04:08,664 | INFO     | chi2: 11.083586066846511
[2025-10-11 17:05:47] 2025-10-11 21:04:08,665 | INFO     | current chi2=11.083586066846511 (change=27.507587477937395 %)
[2025-10-11 17:05:47] 2025-10-11 21:04:08,692 | INFO     | sum of square deviations: 296320228405.6709
[2025-10-11 17:05:47] 2025-10-11 21:04:09,022 | INFO     | sum of deviations: 1611880819511.3303
[2025-10-11 17:05:47] 2025-10-11 21:04:09,023 | INFO     | mean x: 1760185931.5817258
[2025-10-11 17:05:47] 2025-10-11 21:04:09,023 | INFO     | mean y: 2212850.2629441624
[2025-10-11 17:05:47] 2025-10-11 21:04:09,023 | INFO     | -- intersect: -9572597337.875967
[2025-10-11 17:05:47] 2025-10-11 21:04:09,023 | INFO     | intersect: -9572597337.875967
[2025-10-11 17:05:47] 2025-10-11 21:04:09,052 | INFO     | chi2: 11.067605522305282
[2025-10-11 17:05:47] 2025-10-11 21:04:09,053 | INFO     | current chi2=11.067605522305282 (change=0.14418207649445036 %)
[2025-10-11 17:05:47] 2025-10-11 21:04:09,053 | INFO     | right removable region: 984
[2025-10-11 17:05:47] 2025-10-11 21:04:09,069 | INFO     | sum of square deviations: 300855044327.8543
[2025-10-11 17:05:47] 2025-10-11 21:04:09,215 | INFO     | sum of deviations: 1006270228636.4072
[2025-10-11 17:05:47] 2025-10-11 21:04:09,216 | INFO     | mean x: 1760186389.0787878
[2025-10-11 17:05:47] 2025-10-11 21:04:09,221 | INFO     | mean y: 2212474.905050505
[2025-10-11 17:05:47] 2025-10-11 21:04:09,221 | INFO     | -- intersect: -5885085057.825789
[2025-10-11 17:05:47] 2025-10-11 21:04:09,221 | INFO     | intersect: -5885085057.825789
[2025-10-11 17:05:47] 2025-10-11 21:04:09,243 | INFO     | chi2: 11.169189516423028
[2025-10-11 17:05:47] 2025-10-11 21:04:09,244 | INFO     | current chi2=11.169189516423028 (change=26.94769643341573 %)
[2025-10-11 17:05:47] 2025-10-11 21:04:09,263 | INFO     | sum of square deviations: 296319105641.50653
[2025-10-11 17:05:47] 2025-10-11 21:04:09,389 | INFO     | monitor loop #1930: job 0:6837873604 is in state 'finished'
[2025-10-11 17:05:47] 2025-10-11 21:04:09,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:05:47] 2025-10-11 21:04:09,496 | INFO     | sum of deviations: 788108315082.1149
[2025-10-11 17:05:47] 2025-10-11 21:04:09,497 | INFO     | mean x: 1760186541.582741
[2025-10-11 17:05:47] 2025-10-11 21:04:09,498 | INFO     | mean y: 2219808.9126903554
[2025-10-11 17:05:47] 2025-10-11 21:04:09,498 | INFO     | -- intersect: -4679279369.190513
[2025-10-11 17:05:47] 2025-10-11 21:04:09,498 | INFO     | intersect: -4679279369.190513
[2025-10-11 17:05:47] 2025-10-11 21:04:09,513 | INFO     | chi2: 9.057377793457633
[2025-10-11 17:05:47] 2025-10-11 21:04:09,514 | INFO     | current chi2=9.057377793457633 (change=18.90747506665739 %)
[2025-10-11 17:05:47] 2025-10-11 21:04:09,514 | INFO     | left removable region: 20
[2025-10-11 17:05:47] 2025-10-11 21:04:09,532 | INFO     | sum of square deviations: 277766894342.0383
[2025-10-11 17:05:47] 2025-10-11 21:04:09,812 | INFO     | sum of deviations: 790641965723.9874
[2025-10-11 17:05:47] 2025-10-11 21:04:09,813 | INFO     | mean x: 1760186511.1016598
[2025-10-11 17:05:47] 2025-10-11 21:04:09,813 | INFO     | mean y: 2241125.632780083
[2025-10-11 17:05:47] 2025-10-11 21:04:09,819 | INFO     | -- intersect: -5007993540.650276
[2025-10-11 17:05:47] 2025-10-11 21:04:09,819 | INFO     | intersect: -5007993540.650276
[2025-10-11 17:05:47] 2025-10-11 21:04:09,829 | INFO     | chi2: 2.663184224941114
[2025-10-11 17:05:47] 2025-10-11 21:04:09,830 | INFO     | -- intersect: -5007993540.650276
[2025-10-11 17:05:47] 2025-10-11 21:04:09,830 | INFO     | current memory leak: 2.85 B/s (using 964 data points, chi2=2.66)
[2025-10-11 17:05:47] 2025-10-11 21:04:09,852 | INFO     | could have reported an average CPU frequency of 999 MHz (36 samples)
[2025-10-11 17:05:47] 2025-10-11 21:04:09,853 | INFO     | ..............................
[2025-10-11 17:05:47] 2025-10-11 21:04:09,853 | INFO     | . Timing measurements:
[2025-10-11 17:05:47] 2025-10-11 21:04:09,853 | INFO     | . get job = 1 s
[2025-10-11 17:05:47] 2025-10-11 21:04:09,853 | INFO     | . initial setup = 8 s
[2025-10-11 17:05:47] 2025-10-11 21:04:09,853 | INFO     | . payload setup = 84 s
[2025-10-11 17:05:47] 2025-10-11 21:04:09,854 | INFO     | . stage-in = 2 s
[2025-10-11 17:05:47] 2025-10-11 21:04:09,854 | INFO     | . payload execution = 60700 s
[2025-10-11 17:05:47] 2025-10-11 21:04:09,854 | INFO     | . stage-out = 18 s
[2025-10-11 17:05:47] 2025-10-11 21:04:09,854 | INFO     | . log creation = 6 s
[2025-10-11 17:05:47] 2025-10-11 21:04:09,854 | INFO     | ..............................
[2025-10-11 17:05:47] 2025-10-11 21:04:10,268 | INFO     | time since job start (61015s) is within the limit (172800.0s)
[2025-10-11 17:05:47] 2025-10-11 21:04:11,090 | INFO     | 
[2025-10-11 17:05:47] 2025-10-11 21:04:11,090 | INFO     | job summary report
[2025-10-11 17:05:47] 2025-10-11 21:04:11,090 | INFO     | --------------------------------------------------
[2025-10-11 17:05:47] 2025-10-11 21:04:11,091 | INFO     | PanDA job id: 6837873604
[2025-10-11 17:05:47] 2025-10-11 21:04:11,091 | INFO     | task id: 46676269
[2025-10-11 17:05:47] 2025-10-11 21:04:11,091 | INFO     | errors: (none)
[2025-10-11 17:05:47] 2025-10-11 21:04:11,091 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:05:47] 2025-10-11 21:04:11,091 | INFO     | pilot state: finished 
[2025-10-11 17:05:47] 2025-10-11 21:04:11,092 | INFO     | transexitcode: 0
[2025-10-11 17:05:47] 2025-10-11 21:04:11,092 | INFO     | exeerrorcode: 0
[2025-10-11 17:05:47] 2025-10-11 21:04:11,092 | INFO     | exeerrordiag: 
[2025-10-11 17:05:47] 2025-10-11 21:04:11,092 | INFO     | exitcode: 0
[2025-10-11 17:05:47] 2025-10-11 21:04:11,093 | INFO     | exitmsg: OK
[2025-10-11 17:05:47] 2025-10-11 21:04:11,093 | INFO     | cpuconsumptiontime: 118413 s
[2025-10-11 17:05:47] 2025-10-11 21:04:11,093 | INFO     | nevents: 400
[2025-10-11 17:05:47] 2025-10-11 21:04:11,103 | INFO     | neventsw: 0
[2025-10-11 17:05:47] 2025-10-11 21:04:11,104 | INFO     | pid: 973622
[2025-10-11 17:05:47] 2025-10-11 21:04:11,104 | INFO     | pgrp: 973622
[2025-10-11 17:05:47] 2025-10-11 21:04:11,105 | INFO     | corecount: 12
[2025-10-11 17:05:47] 2025-10-11 21:04:11,105 | INFO     | event service: False
[2025-10-11 17:05:47] 2025-10-11 21:04:11,105 | INFO     | sizes: {0: 2348029, 2: 2348630, 4: 2348714, 7: 2348742, 8: 2348941, 9: 2348969, 10: 2349125, 24: 2349153, 39: 2349181, 53: 2349209, 68: 2349293, 73: 2349807, 82: 2
[2025-10-11 17:05:47] 2025-10-11 21:04:11,105 | INFO     | --------------------------------------------------
[2025-10-11 17:05:47] 2025-10-11 21:04:11,105 | INFO     | 
[2025-10-11 17:05:47] 2025-10-11 21:04:11,106 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-11 17:05:47] 2025-10-11 21:04:11,260 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,292 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,292 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:05:47] 2025-10-11 21:04:11,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,306 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:05:47] 2025-10-11 21:04:11,317 | INFO     | job 6837873604 has completed (purged errors)
[2025-10-11 17:05:47] 2025-10-11 21:04:11,318 | INFO     | overall cleanup function is called
[2025-10-11 17:05:47] 2025-10-11 21:04:12,348 | INFO     | --- collectZombieJob: --- 10, [973622]
[2025-10-11 17:05:47] 2025-10-11 21:04:12,348 | INFO     | zombie collector waiting for pid 973622
[2025-10-11 17:05:47] 2025-10-11 21:04:12,349 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:05:47] 2025-10-11 21:04:12,349 | INFO     | collected zombie processes
[2025-10-11 17:05:47] 2025-10-11 21:04:12,349 | INFO     | will attempt to kill all subprocesses of pid=973622
[2025-10-11 17:05:47] 2025-10-11 21:04:19,314 | INFO     | process IDs to be killed: [973622] (in reverse order)
[2025-10-11 17:05:47] 2025-10-11 21:04:20,384 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:05:47] 2025-10-11 21:04:20,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:05:47] 2025-10-11 21:04:20,781 | INFO     | did not find any defunct processes belonging to 973622
[2025-10-11 17:05:47] 2025-10-11 21:04:21,149 | INFO     | did not find any defunct processes belonging to 973622
[2025-10-11 17:05:47] 2025-10-11 21:04:21,171 | INFO     | ready for new job
[2025-10-11 17:05:47] 2025-10-11 21:04:21,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:05:47] 2025-10-11 21:04:21,224 | INFO     | ***************************************
[2025-10-11 17:05:47] 2025-10-11 21:04:21,225 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:05:47] 2025-10-11 21:04:21,225 | INFO     | ***************************************
[2025-10-11 17:05:47] 2025-10-11 21:04:21,249 | INFO     | 
[2025-10-11 17:05:47] 2025-10-11 21:04:21,359 | INFO     | architecture information:
[2025-10-11 17:05:47] 2025-10-11 21:04:21,378 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:05:47] 2025-10-11 21:04:21,575 | INFO     | cat /etc/os-release:
[2025-10-11 17:05:47] NAME="CentOS Linux"
[2025-10-11 17:05:47] VERSION="7 (Core)"
[2025-10-11 17:05:47] ID="centos"
[2025-10-11 17:05:47] ID_LIKE="rhel fedora"
[2025-10-11 17:05:47] VERSION_ID="7"
[2025-10-11 17:05:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:05:47] ANSI_COLOR="0;31"
[2025-10-11 17:05:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:05:47] HOME_URL="https://www.centos.org/"
[2025-10-11 17:05:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:05:47] 
[2025-10-11 17:05:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:05:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:05:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:05:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:05:47] 
[2025-10-11 17:05:47] 2025-10-11 21:04:21,577 | INFO     | ***************************************
[2025-10-11 17:05:47] 2025-10-11 21:04:22,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-11 17:05:47] 2025-10-11 21:04:22,320 | INFO     | sufficient remaining disk space (94550097920 B)
[2025-10-11 17:05:47] 2025-10-11 21:04:22,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:05:47] 2025-10-11 21:04:22,321 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:05:47] 2025-10-11 21:04:22,321 | INFO     | update_server=False
[2025-10-11 17:05:47] 2025-10-11 21:04:22,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:05:47] 2025-10-11 21:04:22,410 | INFO     | all data control threads have been joined
[2025-10-11 17:05:47] 2025-10-11 21:04:22,514 | INFO     | all payload control threads have been joined
[2025-10-11 17:05:47] 2025-10-11 21:04:22,984 | INFO     | all job control threads have been joined
[2025-10-11 17:05:47] 2025-10-11 21:04:23,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:05:47] 2025-10-11 21:04:23,048 | INFO     | aborting loop
[2025-10-11 17:05:47] 2025-10-11 21:04:23,330 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:23,376 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:23,417 | INFO     | [data] control thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:23,486 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:23,515 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:23,541 | INFO     | [payload] control thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:23,674 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:05:47] 2025-10-11 21:04:23,991 | INFO     | [job] control thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:24,045 | INFO     | [job] validate thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:24,055 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:24,331 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:24,344 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:05:47] 2025-10-11 21:04:24,674 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:24,683 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:24,691 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:25,351 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:25,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:05:47] 2025-10-11 21:04:25,697 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:29,500 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:05:47] 2025-10-11 21:04:48,651 | INFO     | PID=942880 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:05:47] 2025-10-11 21:04:48,656 | INFO     | .. there are 38 such processes running
[2025-10-11 17:05:47] 2025-10-11 21:04:48,659 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:05:47] 2025-10-11 21:04:48,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:05:47] 2025-10-11 21:04:48,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:05:47] 2025-10-11 21:05:16,756 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:05:47] 2025-10-11 21:05:18,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671261194048)>', '<ExcThread(monitor, started 140670605960960)>']
[2025-10-11 17:05:47] 2025-10-11 21:05:18,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:05:47] 2025-10-11 21:05:18,847 | INFO     | [monitor] control thread has ended
[2025-10-11 17:05:47] 2025-10-11 21:05:23,231 | INFO     | all workflow threads have been joined
[2025-10-11 17:05:47] 2025-10-11 21:05:23,232 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:05:47] 2025-10-11 21:05:23,233 | INFO     | traces error code: 0
[2025-10-11 17:05:47] 2025-10-11 21:05:23,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:05:47] 2025-10-11 21:05:25,357 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:05:47] 2025-10-11 21:05:25,364 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:05:47] 2025-10-11 21:05:25,371 [wrapper] pilotpid: 942880
[2025-10-11 17:05:47] 2025-10-11 21:05:25,377 [wrapper] Pilot exit status: 0
[2025-10-11 17:05:47] 2025-10-11 21:05:25,587 [wrapper] pandaids: 6837873604
[2025-10-11 17:05:47] 2025-10-11 21:05:25,955 [wrapper] cleanup supervisor_pilot 3541116 942881
[2025-10-11 17:05:47] 2025-10-11 21:05:25,988 [wrapper] Test setup, not cleaning
[2025-10-11 17:05:47] 2025-10-11 21:05:26,031 [wrapper] apfmon messages muted
[2025-10-11 17:05:47] 2025-10-11 21:05:26,083 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:05:47] 2025-10-11 21:05:26,110 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:05:47]  *** Error codes and diagnostics ***
[2025-10-11 17:05:47]     "exeErrorCode": 0,
[2025-10-11 17:05:47]     "exeErrorDiag": "",
[2025-10-11 17:05:47]     "pilotErrorCode": 0,
[2025-10-11 17:05:47]     "pilotErrorDiag": "",
[2025-10-11 17:05:47]  *** Listing of results directory ***
[2025-10-11 17:05:47] total 419916
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 18:34 pilot3.tar.gz
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 18:45 queuedata.json
[2025-10-11 17:05:47] -rwx------. 1 boincer umatlas     36292 Oct 10 18:46 runpilot2-wrapper.sh
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:05:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:04 run_atlas
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:04 job.xml
[2025-10-11 17:05:47] -rw-r--r--. 2 boincer umatlas 220038001 Oct 11 00:04 EVNT.46676267._001876.pool.root.1
[2025-10-11 17:05:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:04 shared
[2025-10-11 17:05:47] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 00:04 input.tar.gz
[2025-10-11 17:05:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:04 start_atlas.sh
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:04 boinc_lockfile
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:05 pandaJob.out
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas    975509 Oct 11 00:07 agis_schedconf.cvmfs.json
[2025-10-11 17:05:47] drwx------. 5 boincer umatlas      4096 Oct 11 00:07 pilot3
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas 194253202 Oct 11 16:57 HITS.46676269._046456.pool.root.1
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas       532 Oct 11 16:58 boinc_task_state.xml
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas      6859 Oct 11 17:02 init_data.xml
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas      1053 Oct 11 17:02 memory_monitor_summary.json
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas   1560580 Oct 11 17:03 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas    936678 Oct 11 17:03 log.46676269._046456.job.log.tgz.1
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas      6237 Oct 11 17:04 heartbeat.json
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas        96 Oct 11 17:04 pilot_heartbeat.json
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas      4824 Oct 11 17:05 pilotlog.txt
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas   4959691 Oct 11 17:05 log.46676269._046456.job.log.1
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas       357 Oct 11 17:05 output.list
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas       620 Oct 11 17:05 runtime_log
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas   5918720 Oct 11 17:05 result.tar.gz
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas      8716 Oct 11 17:05 runtime_log.err
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas       665 Oct 11 17:05 A6oLDmn3aR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7ceNDm8Y0rrm.diag
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas        29 Oct 11 17:05 wrapper_checkpoint.txt
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 17:05 boinc_mmap_file
[2025-10-11 17:05:47] -rw-r--r--. 1 boincer umatlas     21138 Oct 11 17:05 stderr.txt
[2025-10-11 17:05:47] HITS file was successfully produced:
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas 194253202 Oct 11 16:57 shared/HITS.pool.root.1
[2025-10-11 17:05:47]  *** Contents of shared directory: ***
[2025-10-11 17:05:47] total 410952
[2025-10-11 17:05:47] -rw-r--r--. 2 boincer umatlas 220038001 Oct 11 00:04 ATLAS.root_0
[2025-10-11 17:05:47] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 00:04 input.tar.gz
[2025-10-11 17:05:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:04 start_atlas.sh
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas 194253202 Oct 11 16:57 HITS.pool.root.1
[2025-10-11 17:05:47] -rw-------. 1 boincer umatlas   5918720 Oct 11 17:05 result.tar.gz
17:05:48 (931152): run_atlas exited; CPU time 124093.011454
17:05:48 (931152): called boinc_finish(0)

</stderr_txt>
]]>

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