Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:07:52 (2921481): wrapper (7.7.26015): starting
13:07:52 (2921481): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 13:07:52] Arguments: --nthreads 8
[2025-10-11 13:07:52] Threads: 8
[2025-10-11 13:07:52] Checking for CVMFS
[2025-10-11 13:07:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:07:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:07:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:08:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:08:14] 2.13.2.0 1588522 128100 678156 151590 2 506 21669676 32935937 61192 16776704 0 185065364 99.742 123715839 20528 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 13:08:14] CVMFS is ok
[2025-10-11 13:08:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:08:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:08:14] Further information can be found at the LHC@home message board.
[2025-10-11 13:08:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:08:14] Checking for apptainer binary...
[2025-10-11 13:08:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:08:14] Running /usr/bin/apptainer --version
[2025-10-11 13:08:15] apptainer version 1.4.3-1.el9
[2025-10-11 13:08:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:08:16] c-3-40.aglt2.org
[2025-10-11 13:08:16] apptainer works
[2025-10-11 13:08:16] Set ATHENA_PROC_NUMBER=8
[2025-10-11 13:08:16] Set ATHENA_CORE_NUMBER=8
[2025-10-11 13:08:16] Starting ATLAS job with PandaID=6837707381
[2025-10-11 13:08:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 19:17:07]  *** The last 200 lines of the pilot log: ***
[2025-10-11 19:17:07] 2025-10-11 23:16:04,988 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 19:17:07] 2025-10-11 23:16:05,014 | INFO     | fitting pss+swap vs Time
[2025-10-11 19:17:07] 2025-10-11 23:16:05,015 | INFO     | sum of square deviations: 14347161297.509668
[2025-10-11 19:17:07] 2025-10-11 23:16:05,018 | INFO     | sum of deviations: 107369976946.76056
[2025-10-11 19:17:07] 2025-10-11 23:16:05,018 | INFO     | mean x: 1760213603.3008356
[2025-10-11 19:17:07] 2025-10-11 23:16:05,025 | INFO     | mean y: 2095842.4651810585
[2025-10-11 19:17:07] 2025-10-11 23:16:05,025 | INFO     | -- intersect: -13170830152.35095
[2025-10-11 19:17:07] 2025-10-11 23:16:05,025 | INFO     | intersect: -13170830152.35095
[2025-10-11 19:17:07] 2025-10-11 23:16:05,026 | INFO     | chi2: 3.3547449335154647
[2025-10-11 19:17:07] 2025-10-11 23:16:05,026 | INFO     | sum of square deviations: 13756048269.550747
[2025-10-11 19:17:07] 2025-10-11 23:16:05,046 | INFO     | sum of deviations: 127313657293.46616
[2025-10-11 19:17:07] 2025-10-11 23:16:05,047 | INFO     | mean x: 1760213450.8050847
[2025-10-11 19:17:07] 2025-10-11 23:16:05,047 | INFO     | mean y: 2100934.2966101696
[2025-10-11 19:17:07] 2025-10-11 23:16:05,047 | INFO     | -- intersect: -16288857606.114704
[2025-10-11 19:17:07] 2025-10-11 23:16:05,047 | INFO     | intersect: -16288857606.114704
[2025-10-11 19:17:07] 2025-10-11 23:16:05,047 | INFO     | chi2: 2.692509234081068
[2025-10-11 19:17:07] 2025-10-11 23:16:05,047 | INFO     | current chi2=2.692509234081068 (change=19.740269753993914 %)
[2025-10-11 19:17:07] 2025-10-11 23:16:05,047 | INFO     | right removable region: 353
[2025-10-11 19:17:07] 2025-10-11 23:16:05,048 | INFO     | sum of square deviations: 13755982389.55074
[2025-10-11 19:17:07] 2025-10-11 23:16:05,068 | INFO     | sum of deviations: 34360834737.29663
[2025-10-11 19:17:07] 2025-10-11 23:16:05,068 | INFO     | mean x: 1760213755.8050847
[2025-10-11 19:17:07] 2025-10-11 23:16:05,068 | INFO     | mean y: 2114630.6129943505
[2025-10-11 19:17:07] 2025-10-11 23:16:05,068 | INFO     | -- intersect: -4394693409.173253
[2025-10-11 19:17:07] 2025-10-11 23:16:05,068 | INFO     | intersect: -4394693409.173253
[2025-10-11 19:17:07] 2025-10-11 23:16:05,069 | INFO     | chi2: 1.0901063723051871
[2025-10-11 19:17:07] 2025-10-11 23:16:05,069 | INFO     | current chi2=1.0901063723051871 (change=67.5055363698588 %)
[2025-10-11 19:17:07] 2025-10-11 23:16:05,069 | INFO     | sum of square deviations: 13181268906.578846
[2025-10-11 19:17:07] 2025-10-11 23:16:05,096 | INFO     | sum of deviations: 9926348935.469917
[2025-10-11 19:17:07] 2025-10-11 23:16:05,096 | INFO     | mean x: 1760213908.3094556
[2025-10-11 19:17:07] 2025-10-11 23:16:05,096 | INFO     | mean y: 2121086.736389685
[2025-10-11 19:17:07] 2025-10-11 23:16:05,096 | INFO     | -- intersect: -1323433954.950552
[2025-10-11 19:17:07] 2025-10-11 23:16:05,096 | INFO     | intersect: -1323433954.950552
[2025-10-11 19:17:07] 2025-10-11 23:16:05,108 | INFO     | chi2: 0.7975065944354771
[2025-10-11 19:17:07] 2025-10-11 23:16:05,108 | INFO     | current chi2=0.7975065944354771 (change=26.84139688597229 %)
[2025-10-11 19:17:07] 2025-10-11 23:16:05,109 | INFO     | sum of square deviations: 12622809696.718096
[2025-10-11 19:17:07] 2025-10-11 23:16:05,111 | INFO     | sum of deviations: 8696520916.491306
[2025-10-11 19:17:07] 2025-10-11 23:16:05,112 | INFO     | mean x: 1760214060.8110466
[2025-10-11 19:17:07] 2025-10-11 23:16:05,112 | INFO     | mean y: 2121425.6075581396
[2025-10-11 19:17:07] 2025-10-11 23:16:05,112 | INFO     | -- intersect: -1210583096.2173526
[2025-10-11 19:17:07] 2025-10-11 23:16:05,112 | INFO     | intersect: -1210583096.2173526
[2025-10-11 19:17:07] 2025-10-11 23:16:05,118 | INFO     | chi2: 0.7963975457313567
[2025-10-11 19:17:07] 2025-10-11 23:16:05,119 | INFO     | current chi2=0.7963975457313567 (change=0.13906451831981165 %)
[2025-10-11 19:17:07] 2025-10-11 23:16:05,119 | INFO     | left removable region: 30
[2025-10-11 19:17:07] 2025-10-11 23:16:05,119 | INFO     | sum of square deviations: 10449364502.154829
[2025-10-11 19:17:07] 2025-10-11 23:16:05,122 | INFO     | sum of deviations: 18277435092.130043
[2025-10-11 19:17:07] 2025-10-11 23:16:05,122 | INFO     | mean x: 1760214335.3188856
[2025-10-11 19:17:07] 2025-10-11 23:16:05,122 | INFO     | mean y: 2130195.0278637772
[2025-10-11 19:17:07] 2025-10-11 23:16:05,122 | INFO     | -- intersect: -3076736778.6903296
[2025-10-11 19:17:07] 2025-10-11 23:16:05,122 | INFO     | intersect: -3076736778.6903296
[2025-10-11 19:17:07] 2025-10-11 23:16:05,157 | INFO     | chi2: 0.11020909470447594
[2025-10-11 19:17:07] 2025-10-11 23:16:05,157 | INFO     | -- intersect: -3076736778.6903296
[2025-10-11 19:17:07] 2025-10-11 23:16:05,157 | INFO     | current memory leak: 1.75 B/s (using 323 data points, chi2=0.11)
[2025-10-11 19:17:07] 2025-10-11 23:16:05,157 | INFO     | could have reported an average CPU frequency of 2964 MHz (15 samples)
[2025-10-11 19:17:07] 2025-10-11 23:16:05,158 | INFO     | ..............................
[2025-10-11 19:17:07] 2025-10-11 23:16:05,158 | INFO     | . Timing measurements:
[2025-10-11 19:17:07] 2025-10-11 23:16:05,158 | INFO     | . get job = 0 s
[2025-10-11 19:17:07] 2025-10-11 23:16:05,158 | INFO     | . initial setup = 7 s
[2025-10-11 19:17:07] 2025-10-11 23:16:05,158 | INFO     | . payload setup = 37 s
[2025-10-11 19:17:07] 2025-10-11 23:16:05,158 | INFO     | . stage-in = 0 s
[2025-10-11 19:17:07] 2025-10-11 23:16:05,158 | INFO     | . payload execution = 21869 s
[2025-10-11 19:17:07] 2025-10-11 23:16:05,158 | INFO     | . stage-out = 5 s
[2025-10-11 19:17:07] 2025-10-11 23:16:05,192 | INFO     | . log creation = 0 s
[2025-10-11 19:17:07] 2025-10-11 23:16:05,192 | INFO     | ..............................
[2025-10-11 19:17:07] 2025-10-11 23:16:05,799 | INFO     | 
[2025-10-11 19:17:07] 2025-10-11 23:16:05,799 | INFO     | job summary report
[2025-10-11 19:17:07] 2025-10-11 23:16:05,799 | INFO     | --------------------------------------------------
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | PanDA job id: 6837707381
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | task id: 46676269
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | errors: (none)
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | pilot state: finished 
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | transexitcode: 0
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | exeerrorcode: 0
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | exeerrordiag: 
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | exitcode: 0
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | exitmsg: OK
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | cpuconsumptiontime: 43489 s
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | nevents: 400
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | neventsw: 0
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | pid: 2942127
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | pgrp: 2942127
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | corecount: 8
[2025-10-11 19:17:07] 2025-10-11 23:16:05,800 | INFO     | event service: False
[2025-10-11 19:17:07] 2025-10-11 23:16:05,801 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 29: 2349259, 35: 2349415, 21911: 2383336, 21912: 2383335, 21918: 2392389, 21919: 2392445, 219
[2025-10-11 19:17:07] 2025-10-11 23:16:05,801 | INFO     | --------------------------------------------------
[2025-10-11 19:17:07] 2025-10-11 23:16:05,801 | INFO     | 
[2025-10-11 19:17:07] 2025-10-11 23:16:05,801 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 19:17:07] 2025-10-11 23:16:05,925 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 19:17:07] 2025-10-11 23:16:05,926 | INFO     | job 6837707381 has completed (purged errors)
[2025-10-11 19:17:07] 2025-10-11 23:16:05,927 | INFO     | overall cleanup function is called
[2025-10-11 19:17:07] 2025-10-11 23:16:06,113 | INFO     | PID=2927744 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:17:07] 2025-10-11 23:16:06,113 | INFO     | .. there are 80 such processes running
[2025-10-11 19:17:07] 2025-10-11 23:16:06,969 | INFO     | --- collectZombieJob: --- 10, [2942127]
[2025-10-11 19:17:07] 2025-10-11 23:16:06,969 | INFO     | zombie collector waiting for pid 2942127
[2025-10-11 19:17:07] 2025-10-11 23:16:06,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 19:17:07] 2025-10-11 23:16:06,970 | INFO     | collected zombie processes
[2025-10-11 19:17:07] 2025-10-11 23:16:06,970 | INFO     | will attempt to kill all subprocesses of pid=2942127
[2025-10-11 19:17:07] 2025-10-11 23:16:08,450 | INFO     | process IDs to be killed: [2942127] (in reverse order)
[2025-10-11 19:17:07] 2025-10-11 23:16:09,731 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 19:17:07] 2025-10-11 23:16:09,731 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 19:17:07] 2025-10-11 23:16:09,913 | INFO     | did not find any defunct processes belonging to 2942127
[2025-10-11 19:17:07] 2025-10-11 23:16:09,994 | INFO     | did not find any defunct processes belonging to 2942127
[2025-10-11 19:17:07] 2025-10-11 23:16:09,995 | INFO     | ready for new job
[2025-10-11 19:17:07] 2025-10-11 23:16:09,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 19:17:07] 2025-10-11 23:16:09,997 | INFO     | ***************************************
[2025-10-11 19:17:07] 2025-10-11 23:16:09,998 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 19:17:07] 2025-10-11 23:16:09,998 | INFO     | ***************************************
[2025-10-11 19:17:07] 2025-10-11 23:16:09,998 | INFO     | 
[2025-10-11 19:17:07] 2025-10-11 23:16:10,038 | INFO     | architecture information:
[2025-10-11 19:17:07] 2025-10-11 23:16:10,045 | INFO     | executing command: cat /etc/os-release
[2025-10-11 19:17:07] 2025-10-11 23:16:10,158 | INFO     | cat /etc/os-release:
[2025-10-11 19:17:07] NAME="CentOS Linux"
[2025-10-11 19:17:07] VERSION="7 (Core)"
[2025-10-11 19:17:07] ID="centos"
[2025-10-11 19:17:07] ID_LIKE="rhel fedora"
[2025-10-11 19:17:07] VERSION_ID="7"
[2025-10-11 19:17:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 19:17:07] ANSI_COLOR="0;31"
[2025-10-11 19:17:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 19:17:07] HOME_URL="https://www.centos.org/"
[2025-10-11 19:17:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 19:17:07] 
[2025-10-11 19:17:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 19:17:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 19:17:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 19:17:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 19:17:07] 
[2025-10-11 19:17:07] 2025-10-11 23:16:10,159 | INFO     | ***************************************
[2025-10-11 19:17:07] 2025-10-11 23:16:10,663 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 19:17:07] 2025-10-11 23:16:10,770 | INFO     | sufficient remaining disk space (74919706624 B)
[2025-10-11 19:17:07] 2025-10-11 23:16:10,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 19:17:07] 2025-10-11 23:16:10,771 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 19:17:07] 2025-10-11 23:16:10,771 | INFO     | update_server=False
[2025-10-11 19:17:07] 2025-10-11 23:16:10,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 19:17:07] 2025-10-11 23:16:10,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:17:07] 2025-10-11 23:16:10,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 19:17:07] 2025-10-11 23:16:10,933 | INFO     | aborting loop
[2025-10-11 19:17:07] 2025-10-11 23:16:11,367 | INFO     | all job control threads have been joined
[2025-10-11 19:17:07] 2025-10-11 23:16:11,563 | INFO     | all data control threads have been joined
[2025-10-11 19:17:07] 2025-10-11 23:16:11,606 | INFO     | all payload control threads have been joined
[2025-10-11 19:17:07] 2025-10-11 23:16:11,777 | INFO     | [job] retrieve thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:11,786 | INFO     | [job] queue monitor thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:11,815 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:11,937 | INFO     | [job] job monitor thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:12,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 19:17:07] 2025-10-11 23:16:12,379 | INFO     | [job] control thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:12,379 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:12,448 | INFO     | [data] copytool_in thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:12,569 | INFO     | [data] control thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:12,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 19:17:07] 2025-10-11 23:16:12,612 | INFO     | [payload] control thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:12,620 | INFO     | [job] validate thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:13,007 | INFO     | [payload] failed_post thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:13,011 | INFO     | [payload] validate_post thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:13,164 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:13,244 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:14,078 | INFO     | [data] copytool_out thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:16,593 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 19:17:07] 2025-10-11 23:16:40,245 | INFO     | PID=2927744 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 19:17:07] 2025-10-11 23:16:40,255 | INFO     | .. there are 80 such processes running
[2025-10-11 19:17:07] 2025-10-11 23:16:40,255 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 19:17:07] 2025-10-11 23:16:40,256 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 19:17:07] 2025-10-11 23:16:40,256 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 19:17:07] 2025-10-11 23:17:00,338 | INFO     | [monitor] cgroup control has ended
[2025-10-11 19:17:07] 2025-10-11 23:17:00,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668476581696)>', '<ExcThread(monitor, started 139667613665024)>']
[2025-10-11 19:17:07] 2025-10-11 23:17:00,414 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 19:17:07] 2025-10-11 23:17:00,414 | INFO     | [monitor] control thread has ended
[2025-10-11 19:17:07] 2025-10-11 23:17:05,419 | INFO     | all workflow threads have been joined
[2025-10-11 19:17:07] 2025-10-11 23:17:05,421 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 19:17:07] 2025-10-11 23:17:05,421 | INFO     | traces error code: 0
[2025-10-11 19:17:07] 2025-10-11 23:17:05,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 19:17:07] 2025-10-11 23:17:06,109 [wrapper] ==== pilot stdout END ====
[2025-10-11 19:17:07] 2025-10-11 23:17:06,121 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 19:17:07] 2025-10-11 23:17:06,139 [wrapper] pilotpid: 2927744
[2025-10-11 19:17:07] 2025-10-11 23:17:06,164 [wrapper] Pilot exit status: 0
[2025-10-11 19:17:07] 2025-10-11 23:17:06,258 [wrapper] pandaids: 6837707381
[2025-10-11 19:17:07] 2025-10-11 23:17:06,941 [wrapper] cleanup supervisor_pilot  493320 2927745
[2025-10-11 19:17:07] 2025-10-11 23:17:06,955 [wrapper] Test setup, not cleaning
[2025-10-11 19:17:07] 2025-10-11 23:17:07,006 [wrapper] apfmon messages muted
[2025-10-11 19:17:07] 2025-10-11 23:17:07,052 [wrapper] ==== wrapper stdout END ====
[2025-10-11 19:17:07] 2025-10-11 23:17:07,074 [wrapper] ==== wrapper stderr END ====
[2025-10-11 19:17:07]  *** Error codes and diagnostics ***
[2025-10-11 19:17:07]     "exeErrorCode": 0,
[2025-10-11 19:17:07]     "exeErrorDiag": "",
[2025-10-11 19:17:07]     "pilotErrorCode": 0,
[2025-10-11 19:17:07]     "pilotErrorDiag": "",
[2025-10-11 19:17:07]  *** Listing of results directory ***
[2025-10-11 19:17:07] total 417000
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 15:04 pilot3.tar.gz
[2025-10-11 19:17:07] -rwx------. 1 boincer umatlas     36292 Oct 10 15:08 runpilot2-wrapper.sh
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 15:08 queuedata.json
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas       100 Oct 11 13:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 19:17:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 13:07 run_atlas
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas       105 Oct 11 13:07 job.xml
[2025-10-11 19:17:07] -rw-r--r--. 2 boincer umatlas 221622776 Oct 11 13:07 EVNT.46676267._001766.pool.root.1
[2025-10-11 19:17:07] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 13:07 input.tar.gz
[2025-10-11 19:17:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:07 start_atlas.sh
[2025-10-11 19:17:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 13:07 shared
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas         0 Oct 11 13:07 boinc_lockfile
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 13:08 pandaJob.out
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas    975512 Oct 11 13:09 agis_schedconf.cvmfs.json
[2025-10-11 19:17:07] drwx------. 5 boincer umatlas      4096 Oct 11 13:09 pilot3
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas      6841 Oct 11 19:12 init_data.xml
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas 195350238 Oct 11 19:14 HITS.46676269._043631.pool.root.1
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas       531 Oct 11 19:14 boinc_task_state.xml
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas      1041 Oct 11 19:15 memory_monitor_summary.json
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas   1560580 Oct 11 19:15 agis_ddmendpoints.agis.ALL.json
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas    545476 Oct 11 19:15 log.46676269._043631.job.log.tgz.1
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas      7824 Oct 11 19:16 heartbeat.json
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas        95 Oct 11 19:16 pilot_heartbeat.json
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 19:17 boinc_mmap_file
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas        28 Oct 11 19:17 wrapper_checkpoint.txt
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas      4824 Oct 11 19:17 pilotlog.txt
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas   2520782 Oct 11 19:17 log.46676269._043631.job.log.1
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas       357 Oct 11 19:17 output.list
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas       620 Oct 11 19:17 runtime_log
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas   3082240 Oct 11 19:17 result.tar.gz
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas       655 Oct 11 19:17 wLJNDmGfXR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUAeNDmA87bLn.diag
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas      8694 Oct 11 19:17 runtime_log.err
[2025-10-11 19:17:07] -rw-r--r--. 1 boincer umatlas     20917 Oct 11 19:17 stderr.txt
[2025-10-11 19:17:07] HITS file was successfully produced:
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas 195350238 Oct 11 19:14 shared/HITS.pool.root.1
[2025-10-11 19:17:07]  *** Contents of shared directory: ***
[2025-10-11 19:17:07] total 410796
[2025-10-11 19:17:07] -rw-r--r--. 2 boincer umatlas 221622776 Oct 11 13:07 ATLAS.root_0
[2025-10-11 19:17:07] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 13:07 input.tar.gz
[2025-10-11 19:17:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:07 start_atlas.sh
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas 195350238 Oct 11 19:14 HITS.pool.root.1
[2025-10-11 19:17:07] -rw-------. 1 boincer umatlas   3082240 Oct 11 19:17 result.tar.gz
19:17:09 (2921481): run_atlas exited; CPU time 44742.338286
19:17:09 (2921481): called boinc_finish(0)

</stderr_txt>
]]>

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