Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:56 (1460946): wrapper (7.7.26015): starting
00:03:56 (1460946): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 00:03:57] Arguments: --nthreads 12
[2025-10-11 00:03:57] Threads: 12
[2025-10-11 00:03:57] Checking for CVMFS
[2025-10-11 00:03:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:03:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:03:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:04:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:04:01] 2.13.2.0 21981 50938 124528 151571 0 26 33286597 40960000 11496 16776704 0 42941925 99.722 31924247 34438 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:04:01] CVMFS is ok
[2025-10-11 00:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:04:01] Further information can be found at the LHC@home message board.
[2025-10-11 00:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:04:01] Checking for apptainer binary...
[2025-10-11 00:04:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:04:01] Running /usr/bin/apptainer --version
[2025-10-11 00:04:02] apptainer version 1.4.3-1.el9
[2025-10-11 00:04:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:04:03] c-211-7.aglt2.org
[2025-10-11 00:04:03] apptainer works
[2025-10-11 00:04:03] Set ATHENA_PROC_NUMBER=12
[2025-10-11 00:04:03] Set ATHENA_CORE_NUMBER=12
[2025-10-11 00:04:03] Starting ATLAS job with PandaID=6837668467
[2025-10-11 00:04:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 07:17:54]  *** The last 200 lines of the pilot log: ***
[2025-10-11 07:17:54] 2025-10-11 11:17:16,710 | INFO     | sum of square deviations: 23133823979.311287
[2025-10-11 07:17:54] 2025-10-11 11:17:16,724 | INFO     | sum of deviations: 403799835721.86743
[2025-10-11 07:17:54] 2025-10-11 11:17:16,724 | INFO     | mean x: 1760168594.2517815
[2025-10-11 07:17:54] 2025-10-11 11:17:16,724 | INFO     | mean y: 2571377.510688836
[2025-10-11 07:17:54] 2025-10-11 11:17:16,724 | INFO     | -- intersect: -30721090643.834885
[2025-10-11 07:17:54] 2025-10-11 11:17:16,725 | INFO     | intersect: -30721090643.834885
[2025-10-11 07:17:54] 2025-10-11 11:17:16,733 | INFO     | chi2: 9.412422770961346
[2025-10-11 07:17:54] 2025-10-11 11:17:16,734 | INFO     | sum of square deviations: 22319474563.65377
[2025-10-11 07:17:54] 2025-10-11 11:17:16,752 | INFO     | sum of deviations: 462654288596.251
[2025-10-11 07:17:54] 2025-10-11 11:17:16,752 | INFO     | mean x: 1760168441.7788463
[2025-10-11 07:17:54] 2025-10-11 11:17:16,752 | INFO     | mean y: 2582307.6875
[2025-10-11 07:17:54] 2025-10-11 11:17:16,752 | INFO     | -- intersect: -36483468289.88768
[2025-10-11 07:17:54] 2025-10-11 11:17:16,752 | INFO     | intersect: -36483468289.88768
[2025-10-11 07:17:54] 2025-10-11 11:17:16,753 | INFO     | chi2: 7.6289983304801074
[2025-10-11 07:17:54] 2025-10-11 11:17:16,753 | INFO     | current chi2=7.6289983304801074 (change=18.94755987781759 %)
[2025-10-11 07:17:54] 2025-10-11 11:17:16,754 | INFO     | right removable region: 415
[2025-10-11 07:17:54] 2025-10-11 11:17:16,763 | INFO     | sum of square deviations: 22318896283.653774
[2025-10-11 07:17:54] 2025-10-11 11:17:16,776 | INFO     | sum of deviations: 256545857421.00995
[2025-10-11 07:17:54] 2025-10-11 11:17:16,776 | INFO     | mean x: 1760168746.7788463
[2025-10-11 07:17:54] 2025-10-11 11:17:16,776 | INFO     | mean y: 2598922.7283653845
[2025-10-11 07:17:54] 2025-10-11 11:17:16,777 | INFO     | -- intersect: -20229763583.421474
[2025-10-11 07:17:54] 2025-10-11 11:17:16,777 | INFO     | intersect: -20229763583.421474
[2025-10-11 07:17:54] 2025-10-11 11:17:16,777 | INFO     | chi2: 5.175028693243308
[2025-10-11 07:17:54] 2025-10-11 11:17:16,778 | INFO     | current chi2=5.175028693243308 (change=45.01916436213423 %)
[2025-10-11 07:17:54] 2025-10-11 11:17:16,787 | INFO     | sum of square deviations: 21523418937.78584
[2025-10-11 07:17:54] 2025-10-11 11:17:16,801 | INFO     | sum of deviations: 148041900127.5109
[2025-10-11 07:17:54] 2025-10-11 11:17:16,801 | INFO     | mean x: 1760168899.296837
[2025-10-11 07:17:54] 2025-10-11 11:17:16,801 | INFO     | mean y: 2619711.700729927
[2025-10-11 07:17:54] 2025-10-11 11:17:16,802 | INFO     | -- intersect: -12104134756.558458
[2025-10-11 07:17:54] 2025-10-11 11:17:16,802 | INFO     | intersect: -12104134756.558458
[2025-10-11 07:17:54] 2025-10-11 11:17:16,802 | INFO     | chi2: 3.0203233403549015
[2025-10-11 07:17:54] 2025-10-11 11:17:16,803 | INFO     | current chi2=3.0203233403549015 (change=41.63658755557554 %)
[2025-10-11 07:17:54] 2025-10-11 11:17:16,812 | INFO     | sum of square deviations: 20747083667.77347
[2025-10-11 07:17:54] 2025-10-11 11:17:16,825 | INFO     | sum of deviations: 90809910569.05908
[2025-10-11 07:17:54] 2025-10-11 11:17:16,825 | INFO     | mean x: 1760169051.8128078
[2025-10-11 07:17:54] 2025-10-11 11:17:16,825 | INFO     | mean y: 2630939.0270935963
[2025-10-11 07:17:54] 2025-10-11 11:17:16,826 | INFO     | -- intersect: -7701622667.942639
[2025-10-11 07:17:54] 2025-10-11 11:17:16,826 | INFO     | intersect: -7701622667.942639
[2025-10-11 07:17:54] 2025-10-11 11:17:16,826 | INFO     | chi2: 2.4369659906099934
[2025-10-11 07:17:54] 2025-10-11 11:17:16,827 | INFO     | current chi2=2.4369659906099934 (change=19.31440061236493 %)
[2025-10-11 07:17:54] 2025-10-11 11:17:16,827 | INFO     | left removable region: 30
[2025-10-11 07:17:54] 2025-10-11 11:17:16,836 | INFO     | sum of square deviations: 17690629253.33503
[2025-10-11 07:17:54] 2025-10-11 11:17:16,849 | INFO     | sum of deviations: 66374264006.005226
[2025-10-11 07:17:54] 2025-10-11 11:17:16,849 | INFO     | mean x: 1760169326.387013
[2025-10-11 07:17:54] 2025-10-11 11:17:16,849 | INFO     | mean y: 2660722.1610389613
[2025-10-11 07:17:54] 2025-10-11 11:17:16,849 | INFO     | -- intersect: -6601397386.334974
[2025-10-11 07:17:54] 2025-10-11 11:17:16,850 | INFO     | intersect: -6601397386.334974
[2025-10-11 07:17:54] 2025-10-11 11:17:16,850 | INFO     | chi2: 0.15209050102684266
[2025-10-11 07:17:54] 2025-10-11 11:17:16,851 | INFO     | -- intersect: -6601397386.334974
[2025-10-11 07:17:54] 2025-10-11 11:17:16,851 | INFO     | current memory leak: 3.75 B/s (using 385 data points, chi2=0.15)
[2025-10-11 07:17:54] 2025-10-11 11:17:16,860 | INFO     | could have reported an average CPU frequency of 2451 MHz (18 samples)
[2025-10-11 07:17:54] 2025-10-11 11:17:16,860 | INFO     | ..............................
[2025-10-11 07:17:54] 2025-10-11 11:17:16,860 | INFO     | . Timing measurements:
[2025-10-11 07:17:54] 2025-10-11 11:17:16,861 | INFO     | . get job = 0 s
[2025-10-11 07:17:54] 2025-10-11 11:17:16,861 | INFO     | . initial setup = 10 s
[2025-10-11 07:17:54] 2025-10-11 11:17:16,861 | INFO     | . payload setup = 67 s
[2025-10-11 07:17:54] 2025-10-11 11:17:16,861 | INFO     | . stage-in = 1 s
[2025-10-11 07:17:54] 2025-10-11 11:17:16,861 | INFO     | . payload execution = 25669 s
[2025-10-11 07:17:54] 2025-10-11 11:17:16,861 | INFO     | . stage-out = 4 s
[2025-10-11 07:17:54] 2025-10-11 11:17:16,861 | INFO     | . log creation = 1 s
[2025-10-11 07:17:54] 2025-10-11 11:17:16,861 | INFO     | ..............................
[2025-10-11 07:17:54] 2025-10-11 11:17:16,966 | INFO     | time since job start (25883s) is within the limit (172800.0s)
[2025-10-11 07:17:54] 2025-10-11 11:17:17,059 | INFO     | 
[2025-10-11 07:17:54] 2025-10-11 11:17:17,059 | INFO     | job summary report
[2025-10-11 07:17:54] 2025-10-11 11:17:17,060 | INFO     | --------------------------------------------------
[2025-10-11 07:17:54] 2025-10-11 11:17:17,060 | INFO     | PanDA job id: 6837668467
[2025-10-11 07:17:54] 2025-10-11 11:17:17,060 | INFO     | task id: 46676269
[2025-10-11 07:17:54] 2025-10-11 11:17:17,060 | INFO     | errors: (none)
[2025-10-11 07:17:54] 2025-10-11 11:17:17,060 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 07:17:54] 2025-10-11 11:17:17,060 | INFO     | pilot state: finished 
[2025-10-11 07:17:54] 2025-10-11 11:17:17,060 | INFO     | transexitcode: 0
[2025-10-11 07:17:54] 2025-10-11 11:17:17,060 | INFO     | exeerrorcode: 0
[2025-10-11 07:17:54] 2025-10-11 11:17:17,061 | INFO     | exeerrordiag: 
[2025-10-11 07:17:54] 2025-10-11 11:17:17,061 | INFO     | exitcode: 0
[2025-10-11 07:17:54] 2025-10-11 11:17:17,061 | INFO     | exitmsg: OK
[2025-10-11 07:17:54] 2025-10-11 11:17:17,061 | INFO     | cpuconsumptiontime: 63160 s
[2025-10-11 07:17:54] 2025-10-11 11:17:17,061 | INFO     | nevents: 400
[2025-10-11 07:17:54] 2025-10-11 11:17:17,061 | INFO     | neventsw: 0
[2025-10-11 07:17:54] 2025-10-11 11:17:17,061 | INFO     | pid: 1489091
[2025-10-11 07:17:54] 2025-10-11 11:17:17,061 | INFO     | pgrp: 1489091
[2025-10-11 07:17:54] 2025-10-11 11:17:17,062 | INFO     | corecount: 12
[2025-10-11 07:17:54] 2025-10-11 11:17:17,062 | INFO     | event service: False
[2025-10-11 07:17:54] 2025-10-11 11:17:17,062 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348742, 3: 2348913, 4: 2348969, 16: 2348969, 27: 2349125, 39: 2349153, 51: 2349443, 52: 2349471, 63: 2349499, 25742: 2385884, 2
[2025-10-11 07:17:54] 2025-10-11 11:17:17,062 | INFO     | --------------------------------------------------
[2025-10-11 07:17:54] 2025-10-11 11:17:17,062 | INFO     | 
[2025-10-11 07:17:54] 2025-10-11 11:17:17,062 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 07:17:54] 2025-10-11 11:17:17,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,254 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,256 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 07:17:54] 2025-10-11 11:17:17,270 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,270 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 07:17:54] 2025-10-11 11:17:17,271 | INFO     | job 6837668467 has completed (purged errors)
[2025-10-11 07:17:54] 2025-10-11 11:17:17,271 | INFO     | overall cleanup function is called
[2025-10-11 07:17:54] 2025-10-11 11:17:18,285 | INFO     | --- collectZombieJob: --- 10, [1489091]
[2025-10-11 07:17:54] 2025-10-11 11:17:18,285 | INFO     | zombie collector waiting for pid 1489091
[2025-10-11 07:17:54] 2025-10-11 11:17:18,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 07:17:54] 2025-10-11 11:17:18,286 | INFO     | collected zombie processes
[2025-10-11 07:17:54] 2025-10-11 11:17:18,286 | INFO     | will attempt to kill all subprocesses of pid=1489091
[2025-10-11 07:17:54] 2025-10-11 11:17:19,594 | INFO     | PID=1467891 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 07:17:54] 2025-10-11 11:17:19,595 | INFO     | .. there are 9 such processes running
[2025-10-11 07:17:54] 2025-10-11 11:17:19,731 | INFO     | process IDs to be killed: [1489091] (in reverse order)
[2025-10-11 07:17:54] 2025-10-11 11:17:19,990 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 07:17:54] 2025-10-11 11:17:19,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 07:17:54] 2025-10-11 11:17:20,053 | INFO     | did not find any defunct processes belonging to 1489091
[2025-10-11 07:17:54] 2025-10-11 11:17:20,082 | INFO     | did not find any defunct processes belonging to 1489091
[2025-10-11 07:17:54] 2025-10-11 11:17:20,082 | INFO     | ready for new job
[2025-10-11 07:17:54] 2025-10-11 11:17:20,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 07:17:54] 2025-10-11 11:17:20,087 | INFO     | ***************************************
[2025-10-11 07:17:54] 2025-10-11 11:17:20,087 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 07:17:54] 2025-10-11 11:17:20,087 | INFO     | ***************************************
[2025-10-11 07:17:54] 2025-10-11 11:17:20,087 | INFO     | 
[2025-10-11 07:17:54] 2025-10-11 11:17:20,128 | INFO     | architecture information:
[2025-10-11 07:17:54] 2025-10-11 11:17:20,129 | INFO     | executing command: cat /etc/os-release
[2025-10-11 07:17:54] 2025-10-11 11:17:20,184 | INFO     | cat /etc/os-release:
[2025-10-11 07:17:54] NAME="CentOS Linux"
[2025-10-11 07:17:54] VERSION="7 (Core)"
[2025-10-11 07:17:54] ID="centos"
[2025-10-11 07:17:54] ID_LIKE="rhel fedora"
[2025-10-11 07:17:54] VERSION_ID="7"
[2025-10-11 07:17:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 07:17:54] ANSI_COLOR="0;31"
[2025-10-11 07:17:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 07:17:54] HOME_URL="https://www.centos.org/"
[2025-10-11 07:17:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 07:17:54] 
[2025-10-11 07:17:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 07:17:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 07:17:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 07:17:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 07:17:54] 
[2025-10-11 07:17:54] 2025-10-11 11:17:20,185 | INFO     | ***************************************
[2025-10-11 07:17:54] 2025-10-11 11:17:20,689 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 07:17:54] 2025-10-11 11:17:20,771 | INFO     | sufficient remaining disk space (63225987072 B)
[2025-10-11 07:17:54] 2025-10-11 11:17:20,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 07:17:54] 2025-10-11 11:17:20,772 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 07:17:54] 2025-10-11 11:17:20,772 | INFO     | update_server=False
[2025-10-11 07:17:54] 2025-10-11 11:17:20,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 07:17:54] 2025-10-11 11:17:20,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:17:54] 2025-10-11 11:17:20,772 | INFO     | aborting loop
[2025-10-11 07:17:54] 2025-10-11 11:17:20,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 07:17:54] 2025-10-11 11:17:21,032 | INFO     | all data control threads have been joined
[2025-10-11 07:17:54] 2025-10-11 11:17:21,243 | INFO     | all payload control threads have been joined
[2025-10-11 07:17:54] 2025-10-11 11:17:21,404 | INFO     | all job control threads have been joined
[2025-10-11 07:17:54] 2025-10-11 11:17:21,780 | INFO     | [job] retrieve thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:21,784 | INFO     | [job] job monitor thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:22,037 | INFO     | [data] control thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:22,077 | INFO     | [payload] failed_post thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:22,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 07:17:54] 2025-10-11 11:17:22,249 | INFO     | [payload] control thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:22,410 | INFO     | [job] control thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:22,433 | INFO     | [payload] validate_post thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:22,829 | INFO     | [data] copytool_out thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:22,930 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:22,935 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:23,087 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:23,090 | INFO     | [job] queue monitor thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:23,135 | INFO     | [job] validate thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:23,210 | INFO     | [data] copytool_in thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:23,230 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:24,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 07:17:54] 2025-10-11 11:17:28,099 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 07:17:54] 2025-10-11 11:17:41,184 | INFO     | [monitor] cgroup control has ended
[2025-10-11 07:17:54] 2025-10-11 11:17:41,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140509781407552)>', '<ExcThread(monitor, started 140509276251904)>']
[2025-10-11 07:17:54] 2025-10-11 11:17:46,411 | INFO     | all workflow threads have been joined
[2025-10-11 07:17:54] 2025-10-11 11:17:46,411 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 07:17:54] 2025-10-11 11:17:46,412 | INFO     | traces error code: 0
[2025-10-11 07:17:54] 2025-10-11 11:17:46,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 07:17:54] 2025-10-11 11:17:52,540 | INFO     | PID=1467891 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 07:17:54] 2025-10-11 11:17:52,541 | INFO     | .. there are 8 such processes running
[2025-10-11 07:17:54] 2025-10-11 11:17:52,546 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 07:17:54] 2025-10-11 11:17:52,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 07:17:54] 2025-10-11 11:17:52,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 07:17:54] 2025-10-11 11:17:52,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 07:17:54] 2025-10-11 11:17:52,547 | CRITICAL | thread 'MainThread' is not alive
[2025-10-11 07:17:54] 2025-10-11 11:17:52,547 | INFO     | [monitor] control thread has ended
[2025-10-11 07:17:54] 2025-10-11 11:17:53,592 [wrapper] ==== pilot stdout END ====
[2025-10-11 07:17:54] 2025-10-11 11:17:53,620 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 07:17:54] 2025-10-11 11:17:53,671 [wrapper] pilotpid: 1467891
[2025-10-11 07:17:54] 2025-10-11 11:17:53,692 [wrapper] Pilot exit status: 0
[2025-10-11 07:17:54] 2025-10-11 11:17:53,822 [wrapper] pandaids: 6837668467
[2025-10-11 07:17:54] 2025-10-11 11:17:53,904 [wrapper] cleanup supervisor_pilot 2082835 1467892
[2025-10-11 07:17:54] 2025-10-11 11:17:53,908 [wrapper] Test setup, not cleaning
[2025-10-11 07:17:54] 2025-10-11 11:17:53,911 [wrapper] apfmon messages muted
[2025-10-11 07:17:54] 2025-10-11 11:17:53,915 [wrapper] ==== wrapper stdout END ====
[2025-10-11 07:17:54] 2025-10-11 11:17:53,918 [wrapper] ==== wrapper stderr END ====
[2025-10-11 07:17:54]  *** Error codes and diagnostics ***
[2025-10-11 07:17:54]     "exeErrorCode": 0,
[2025-10-11 07:17:54]     "exeErrorDiag": "",
[2025-10-11 07:17:54]     "pilotErrorCode": 0,
[2025-10-11 07:17:54]     "pilotErrorDiag": "",
[2025-10-11 07:17:54]  *** Listing of results directory ***
[2025-10-11 07:17:54] total 420188
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 11:50 pilot3.tar.gz
[2025-10-11 07:17:54] -rwx------. 1 boincer umatlas     36292 Oct 10 12:01 runpilot2-wrapper.sh
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 12:01 queuedata.json
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 07:17:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:03 run_atlas
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:03 job.xml
[2025-10-11 07:17:54] -rw-r--r--. 2 boincer umatlas 222063006 Oct 11 00:03 EVNT.46676267._001674.pool.root.1
[2025-10-11 07:17:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:03 start_atlas.sh
[2025-10-11 07:17:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:03 shared
[2025-10-11 07:17:54] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 00:03 input.tar.gz
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:03 boinc_lockfile
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:04 pandaJob.out
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas    975509 Oct 11 00:05 agis_schedconf.cvmfs.json
[2025-10-11 07:17:54] drwx------. 5 boincer umatlas      4096 Oct 11 00:05 pilot3
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas      6613 Oct 11 07:13 init_data.xml
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas 196488057 Oct 11 07:15 HITS.46676269._041310.pool.root.1
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas       531 Oct 11 07:15 boinc_task_state.xml
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas      1052 Oct 11 07:16 memory_monitor_summary.json
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas   1560580 Oct 11 07:16 agis_ddmendpoints.agis.ALL.json
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas    686086 Oct 11 07:16 log.46676269._041310.job.log.tgz.1
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas      7850 Oct 11 07:17 heartbeat.json
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas        95 Oct 11 07:17 pilot_heartbeat.json
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas       892 Oct 11 07:17 pilotlog.txt
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas   3224115 Oct 11 07:17 log.46676269._041310.job.log.1
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas       357 Oct 11 07:17 output.list
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas        28 Oct 11 07:17 wrapper_checkpoint.txt
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas       620 Oct 11 07:17 runtime_log
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas   3932160 Oct 11 07:17 result.tar.gz
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas      8701 Oct 11 07:17 runtime_log.err
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas       661 Oct 11 07:17 ecAODmqjUR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWndNDm99Fdsm.diag
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 07:17 boinc_mmap_file
[2025-10-11 07:17:54] -rw-r--r--. 1 boincer umatlas     21174 Oct 11 07:17 stderr.txt
[2025-10-11 07:17:54] HITS file was successfully produced:
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas 196488057 Oct 11 07:15 shared/HITS.pool.root.1
[2025-10-11 07:17:54]  *** Contents of shared directory: ***
[2025-10-11 07:17:54] total 413164
[2025-10-11 07:17:54] -rw-r--r--. 2 boincer umatlas 222063006 Oct 11 00:03 ATLAS.root_0
[2025-10-11 07:17:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:03 start_atlas.sh
[2025-10-11 07:17:54] -rw-r--r--. 2 boincer umatlas    569676 Oct 11 00:03 input.tar.gz
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas 196488057 Oct 11 07:15 HITS.pool.root.1
[2025-10-11 07:17:54] -rw-------. 1 boincer umatlas   3932160 Oct 11 07:17 result.tar.gz
07:17:56 (1460946): run_atlas exited; CPU time 63928.651632
07:17:56 (1460946): called boinc_finish(0)

</stderr_txt>
]]>

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