Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:00 (136121): wrapper (7.7.26015): starting
00:03:00 (136121): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 00:03:00] Arguments: --nthreads 9
[2025-10-12 00:03:00] Threads: 9
[2025-10-12 00:03:00] Checking for CVMFS
[2025-10-12 00:03:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 00:03:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 00:03:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 00:03:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 00:03:02] 2.13.2.0 705810 128757 220084 151559 -1923 1171 31629376 32935937 31766 16776704 0 97425820 99.695 77580407 29997 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 00:03:02] CVMFS is ok
[2025-10-12 00:03:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 00:03:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 00:03:02] Further information can be found at the LHC@home message board.
[2025-10-12 00:03:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 00:03:02] Checking for apptainer binary...
[2025-10-12 00:03:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 00:03:02] Running /usr/bin/apptainer --version
[2025-10-12 00:03:03] apptainer version 1.4.3-1.el9
[2025-10-12 00:03:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 00:03:05] c-8-16.aglt2.org
[2025-10-12 00:03:05] apptainer works
[2025-10-12 00:03:05] Set ATHENA_PROC_NUMBER=9
[2025-10-12 00:03:05] Set ATHENA_CORE_NUMBER=9
[2025-10-12 00:03:05] Starting ATLAS job with PandaID=6837932354
[2025-10-12 00:03:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:29:02]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:29:02] 2025-10-12 20:27:45,376 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:29:02] 2025-10-12 20:27:45,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:29:02] 2025-10-12 20:27:45,395 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:29:02] 2025-10-12 20:27:45,396 | INFO     | sum of square deviations: 278646922871.9127
[2025-10-12 16:29:02] 2025-10-12 20:27:45,420 | INFO     | sum of deviations: 408694511814.96185
[2025-10-12 16:29:02] 2025-10-12 20:27:45,420 | INFO     | mean x: 1760271445.888083
[2025-10-12 16:29:02] 2025-10-12 20:27:45,420 | INFO     | mean y: 2404902.3792746114
[2025-10-12 16:29:02] 2025-10-12 20:27:45,420 | INFO     | -- intersect: -2579404621.3876324
[2025-10-12 16:29:02] 2025-10-12 20:27:45,420 | INFO     | intersect: -2579404621.3876324
[2025-10-12 16:29:02] 2025-10-12 20:27:45,422 | INFO     | chi2: 5.375995888933961
[2025-10-12 16:29:02] 2025-10-12 20:27:45,423 | INFO     | sum of square deviations: 274338111800.51562
[2025-10-12 16:29:02] 2025-10-12 20:27:45,446 | INFO     | sum of deviations: 508606510467.6102
[2025-10-12 16:29:02] 2025-10-12 20:27:45,447 | INFO     | mean x: 1760271293.390625
[2025-10-12 16:29:02] 2025-10-12 20:27:45,447 | INFO     | mean y: 2408430.4010416665
[2025-10-12 16:29:02] 2025-10-12 20:27:45,447 | INFO     | -- intersect: -3261029646.546567
[2025-10-12 16:29:02] 2025-10-12 20:27:45,447 | INFO     | intersect: -3261029646.546567
[2025-10-12 16:29:02] 2025-10-12 20:27:45,448 | INFO     | chi2: 4.485515198870163
[2025-10-12 16:29:02] 2025-10-12 20:27:45,448 | INFO     | current chi2=4.485515198870163 (change=16.564013597867095 %)
[2025-10-12 16:29:02] 2025-10-12 20:27:45,449 | INFO     | right removable region: 959
[2025-10-12 16:29:02] 2025-10-12 20:27:45,450 | INFO     | sum of square deviations: 274337706272.949
[2025-10-12 16:29:02] 2025-10-12 20:27:45,473 | INFO     | sum of deviations: 134019929152.72781
[2025-10-12 16:29:02] 2025-10-12 20:27:45,473 | INFO     | mean x: 1760271598.3927083
[2025-10-12 16:29:02] 2025-10-12 20:27:45,473 | INFO     | mean y: 2414617.846875
[2025-10-12 16:29:02] 2025-10-12 20:27:45,473 | INFO     | -- intersect: -857516297.6337423
[2025-10-12 16:29:02] 2025-10-12 20:27:45,473 | INFO     | intersect: -857516297.6337423
[2025-10-12 16:29:02] 2025-10-12 20:27:45,475 | INFO     | chi2: 2.2107261245607615
[2025-10-12 16:29:02] 2025-10-12 20:27:45,475 | INFO     | current chi2=2.2107261245607615 (change=58.87783081993502 %)
[2025-10-12 16:29:02] 2025-10-12 20:27:45,476 | INFO     | sum of square deviations: 270073258795.52887
[2025-10-12 16:29:02] 2025-10-12 20:27:45,498 | INFO     | sum of deviations: 13518420963.377045
[2025-10-12 16:29:02] 2025-10-12 20:27:45,499 | INFO     | mean x: 1760271750.895288
[2025-10-12 16:29:02] 2025-10-12 20:27:45,499 | INFO     | mean y: 2418924.8837696337
[2025-10-12 16:29:02] 2025-10-12 20:27:45,499 | INFO     | -- intersect: -85690851.8659499
[2025-10-12 16:29:02] 2025-10-12 20:27:45,499 | INFO     | intersect: -85690851.8659499
[2025-10-12 16:29:02] 2025-10-12 20:27:45,500 | INFO     | chi2: 1.6131466157681074
[2025-10-12 16:29:02] 2025-10-12 20:27:45,501 | INFO     | current chi2=1.6131466157681074 (change=27.03091541524097 %)
[2025-10-12 16:29:02] 2025-10-12 20:27:45,502 | INFO     | sum of square deviations: 265853230511.59573
[2025-10-12 16:29:02] 2025-10-12 20:27:45,524 | INFO     | sum of deviations: -51493745326.183105
[2025-10-12 16:29:02] 2025-10-12 20:27:45,525 | INFO     | mean x: 1760271903.3978946
[2025-10-12 16:29:02] 2025-10-12 20:27:45,525 | INFO     | mean y: 2421273.0084210527
[2025-10-12 16:29:02] 2025-10-12 20:27:45,525 | INFO     | -- intersect: 343372529.9255462
[2025-10-12 16:29:02] 2025-10-12 20:27:45,525 | INFO     | intersect: 343372529.9255462
[2025-10-12 16:29:02] 2025-10-12 20:27:45,526 | INFO     | chi2: 1.4364142181618544
[2025-10-12 16:29:02] 2025-10-12 20:27:45,527 | INFO     | current chi2=1.4364142181618544 (change=10.955755408636614 %)
[2025-10-12 16:29:02] 2025-10-12 20:27:45,527 | INFO     | left removable region: 30
[2025-10-12 16:29:02] 2025-10-12 20:27:45,528 | INFO     | sum of square deviations: 248609984460.08005
[2025-10-12 16:29:02] 2025-10-12 20:27:45,552 | INFO     | sum of deviations: 19126205841.996796
[2025-10-12 16:29:02] 2025-10-12 20:27:45,552 | INFO     | mean x: 1760272177.8966632
[2025-10-12 16:29:02] 2025-10-12 20:27:45,552 | INFO     | mean y: 2426101.0312163616
[2025-10-12 16:29:02] 2025-10-12 20:27:45,553 | INFO     | -- intersect: -132996167.24778606
[2025-10-12 16:29:02] 2025-10-12 20:27:45,553 | INFO     | intersect: -132996167.24778606
[2025-10-12 16:29:02] 2025-10-12 20:27:45,554 | INFO     | chi2: 0.5238509137727901
[2025-10-12 16:29:02] 2025-10-12 20:27:45,554 | INFO     | -- intersect: -132996167.24778606
[2025-10-12 16:29:02] 2025-10-12 20:27:45,554 | INFO     | current memory leak: 0.08 B/s (using 929 data points, chi2=0.52)
[2025-10-12 16:29:02] 2025-10-12 20:27:45,555 | INFO     | could have reported an average CPU frequency of 2601 MHz (35 samples)
[2025-10-12 16:29:02] 2025-10-12 20:27:45,556 | INFO     | ..............................
[2025-10-12 16:29:02] 2025-10-12 20:27:45,556 | INFO     | . Timing measurements:
[2025-10-12 16:29:02] 2025-10-12 20:27:45,556 | INFO     | . get job = 0 s
[2025-10-12 16:29:02] 2025-10-12 20:27:45,556 | INFO     | . initial setup = 7 s
[2025-10-12 16:29:02] 2025-10-12 20:27:45,556 | INFO     | . payload setup = 50 s
[2025-10-12 16:29:02] 2025-10-12 20:27:45,556 | INFO     | . stage-in = 0 s
[2025-10-12 16:29:02] 2025-10-12 20:27:45,556 | INFO     | . payload execution = 58846 s
[2025-10-12 16:29:02] 2025-10-12 20:27:45,557 | INFO     | . stage-out = 3 s
[2025-10-12 16:29:02] 2025-10-12 20:27:45,557 | INFO     | . log creation = 0 s
[2025-10-12 16:29:02] 2025-10-12 20:27:45,557 | INFO     | ..............................
[2025-10-12 16:29:02] 2025-10-12 20:27:45,666 | INFO     | 
[2025-10-12 16:29:02] 2025-10-12 20:27:45,666 | INFO     | job summary report
[2025-10-12 16:29:02] 2025-10-12 20:27:45,666 | INFO     | --------------------------------------------------
[2025-10-12 16:29:02] 2025-10-12 20:27:45,667 | INFO     | PanDA job id: 6837932354
[2025-10-12 16:29:02] 2025-10-12 20:27:45,667 | INFO     | task id: 46676269
[2025-10-12 16:29:02] 2025-10-12 20:27:45,667 | INFO     | errors: (none)
[2025-10-12 16:29:02] 2025-10-12 20:27:45,667 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:29:02] 2025-10-12 20:27:45,667 | INFO     | pilot state: finished 
[2025-10-12 16:29:02] 2025-10-12 20:27:45,667 | INFO     | transexitcode: 0
[2025-10-12 16:29:02] 2025-10-12 20:27:45,667 | INFO     | exeerrorcode: 0
[2025-10-12 16:29:02] 2025-10-12 20:27:45,667 | INFO     | exeerrordiag: 
[2025-10-12 16:29:02] 2025-10-12 20:27:45,667 | INFO     | exitcode: 0
[2025-10-12 16:29:02] 2025-10-12 20:27:45,667 | INFO     | exitmsg: OK
[2025-10-12 16:29:02] 2025-10-12 20:27:45,668 | INFO     | cpuconsumptiontime: 49921 s
[2025-10-12 16:29:02] 2025-10-12 20:27:45,668 | INFO     | nevents: 400
[2025-10-12 16:29:02] 2025-10-12 20:27:45,668 | INFO     | neventsw: 0
[2025-10-12 16:29:02] 2025-10-12 20:27:45,668 | INFO     | pid: 168050
[2025-10-12 16:29:02] 2025-10-12 20:27:45,668 | INFO     | pgrp: 168050
[2025-10-12 16:29:02] 2025-10-12 20:27:45,668 | INFO     | corecount: 9
[2025-10-12 16:29:02] 2025-10-12 20:27:45,668 | INFO     | event service: False
[2025-10-12 16:29:02] 2025-10-12 20:27:45,668 | INFO     | sizes: {0: 2348029, 2: 2348630, 3: 2348714, 4: 2348827, 5: 2348941, 6: 2348997, 17: 2349153, 29: 2349181, 40: 2349209, 48: 2349499, 52: 2349527, 58897: 2398357, 58
[2025-10-12 16:29:02] 2025-10-12 20:27:45,668 | INFO     | --------------------------------------------------
[2025-10-12 16:29:02] 2025-10-12 20:27:45,668 | INFO     | 
[2025-10-12 16:29:02] 2025-10-12 20:27:45,669 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 16:29:02] 2025-10-12 20:27:45,692 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,692 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,692 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,707 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:29:02] 2025-10-12 20:27:45,707 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,707 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:29:02] 2025-10-12 20:27:45,707 | INFO     | job 6837932354 has completed (purged errors)
[2025-10-12 16:29:02] 2025-10-12 20:27:45,707 | INFO     | overall cleanup function is called
[2025-10-12 16:29:02] 2025-10-12 20:27:46,732 | INFO     | --- collectZombieJob: --- 10, [168050]
[2025-10-12 16:29:02] 2025-10-12 20:27:46,732 | INFO     | zombie collector waiting for pid 168050
[2025-10-12 16:29:02] 2025-10-12 20:27:46,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:29:02] 2025-10-12 20:27:46,732 | INFO     | collected zombie processes
[2025-10-12 16:29:02] 2025-10-12 20:27:46,732 | INFO     | will attempt to kill all subprocesses of pid=168050
[2025-10-12 16:29:02] 2025-10-12 20:27:47,646 | INFO     | process IDs to be killed: [168050] (in reverse order)
[2025-10-12 16:29:02] 2025-10-12 20:27:47,764 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:29:02] 2025-10-12 20:27:47,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:29:02] 2025-10-12 20:27:47,797 | INFO     | did not find any defunct processes belonging to 168050
[2025-10-12 16:29:02] 2025-10-12 20:27:47,817 | INFO     | did not find any defunct processes belonging to 168050
[2025-10-12 16:29:02] 2025-10-12 20:27:47,818 | INFO     | ready for new job
[2025-10-12 16:29:02] 2025-10-12 20:27:47,818 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:29:02] 2025-10-12 20:27:47,831 | INFO     | ***************************************
[2025-10-12 16:29:02] 2025-10-12 20:27:47,831 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:29:02] 2025-10-12 20:27:47,832 | INFO     | ***************************************
[2025-10-12 16:29:02] 2025-10-12 20:27:47,832 | INFO     | 
[2025-10-12 16:29:02] 2025-10-12 20:27:47,846 | INFO     | architecture information:
[2025-10-12 16:29:02] 2025-10-12 20:27:47,847 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:29:02] 2025-10-12 20:27:47,863 | INFO     | cat /etc/os-release:
[2025-10-12 16:29:02] NAME="CentOS Linux"
[2025-10-12 16:29:02] VERSION="7 (Core)"
[2025-10-12 16:29:02] ID="centos"
[2025-10-12 16:29:02] ID_LIKE="rhel fedora"
[2025-10-12 16:29:02] VERSION_ID="7"
[2025-10-12 16:29:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:29:02] ANSI_COLOR="0;31"
[2025-10-12 16:29:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:29:02] HOME_URL="https://www.centos.org/"
[2025-10-12 16:29:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:29:02] 
[2025-10-12 16:29:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:29:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:29:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:29:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:29:02] 
[2025-10-12 16:29:02] 2025-10-12 20:27:47,863 | INFO     | ***************************************
[2025-10-12 16:29:02] 2025-10-12 20:27:48,373 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 16:29:02] 2025-10-12 20:27:48,478 | INFO     | sufficient remaining disk space (74308386816 B)
[2025-10-12 16:29:02] 2025-10-12 20:27:48,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:29:02] 2025-10-12 20:27:48,479 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:29:02] 2025-10-12 20:27:48,479 | INFO     | update_server=False
[2025-10-12 16:29:02] 2025-10-12 20:27:48,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:29:02] 2025-10-12 20:27:48,480 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:29:02] 2025-10-12 20:27:48,480 | INFO     | aborting loop
[2025-10-12 16:29:02] 2025-10-12 20:27:48,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:29:02] 2025-10-12 20:27:48,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:29:02] 2025-10-12 20:27:49,075 | INFO     | all data control threads have been joined
[2025-10-12 16:29:02] 2025-10-12 20:27:49,486 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:49,503 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:49,670 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:49,912 | INFO     | all payload control threads have been joined
[2025-10-12 16:29:02] 2025-10-12 20:27:49,992 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:50,031 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:50,034 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:50,081 | INFO     | [data] control thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:50,162 | INFO     | all job control threads have been joined
[2025-10-12 16:29:02] 2025-10-12 20:27:50,180 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:50,365 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:50,491 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:50,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:29:02] 2025-10-12 20:27:50,918 | INFO     | [payload] control thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:50,946 | INFO     | [job] validate thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:51,186 | INFO     | [job] control thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:51,688 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:52,493 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:27:58,636 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:29:02] 2025-10-12 20:27:59,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:29:02] 2025-10-12 20:28:18,478 | INFO     | PID=144806 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 16:29:02] 2025-10-12 20:28:18,479 | INFO     | .. there are 29 such processes running
[2025-10-12 16:29:02] 2025-10-12 20:28:18,481 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:29:02] 2025-10-12 20:28:18,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:29:02] 2025-10-12 20:28:18,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:29:02] 2025-10-12 20:28:30,662 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:29:02] 2025-10-12 20:28:31,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140206456571712)>', '<ExcThread(monitor, started 140205960972032)>']
[2025-10-12 16:29:02] 2025-10-12 20:28:31,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:29:02] 2025-10-12 20:28:31,570 | INFO     | [monitor] control thread has ended
[2025-10-12 16:29:02] 2025-10-12 20:28:36,159 | INFO     | all workflow threads have been joined
[2025-10-12 16:29:02] 2025-10-12 20:28:36,159 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:29:02] 2025-10-12 20:28:36,159 | INFO     | traces error code: 0
[2025-10-12 16:29:02] 2025-10-12 20:28:36,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:29:02] 2025-10-12 20:28:36,344 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:29:02] 2025-10-12 20:28:36,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:29:02] 2025-10-12 20:28:36,353 [wrapper] pilotpid: 144806
[2025-10-12 16:29:02] 2025-10-12 20:28:36,356 [wrapper] Pilot exit status: 0
[2025-10-12 16:29:02] 2025-10-12 20:28:36,441 [wrapper] pandaids: 6837932354
[2025-10-12 16:29:02] 2025-10-12 20:28:36,547 [wrapper] cleanup supervisor_pilot 3040785 144807
[2025-10-12 16:29:02] 2025-10-12 20:28:36,561 [wrapper] Test setup, not cleaning
[2025-10-12 16:29:02] 2025-10-12 20:28:36,588 [wrapper] apfmon messages muted
[2025-10-12 16:29:02] 2025-10-12 20:28:36,591 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:29:02] 2025-10-12 20:28:36,594 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:29:02]  *** Error codes and diagnostics ***
[2025-10-12 16:29:02]     "exeErrorCode": 0,
[2025-10-12 16:29:02]     "exeErrorDiag": "",
[2025-10-12 16:29:02]     "pilotErrorCode": 0,
[2025-10-12 16:29:02]     "pilotErrorDiag": "",
[2025-10-12 16:29:02]  *** Listing of results directory ***
[2025-10-12 16:29:02] total 424016
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-12 16:29:02] -rwx------. 1 boincer umatlas     36292 Oct 10 21:53 runpilot2-wrapper.sh
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:53 queuedata.json
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas       100 Oct 12 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:29:02] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 00:02 run_atlas
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas       105 Oct 12 00:02 job.xml
[2025-10-12 16:29:02] -rw-r--r--. 2 boincer umatlas 221766638 Oct 12 00:03 EVNT.46676267._001971.pool.root.1
[2025-10-12 16:29:02] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 00:03 shared
[2025-10-12 16:29:02] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:03 input.tar.gz
[2025-10-12 16:29:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas         0 Oct 12 00:03 boinc_lockfile
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 00:03 pandaJob.out
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas    975541 Oct 12 00:04 agis_schedconf.cvmfs.json
[2025-10-12 16:29:02] drwx------. 5 boincer umatlas      4096 Oct 12 00:04 pilot3
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas      6657 Oct 12 16:20 init_data.xml
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas       531 Oct 12 16:26 boinc_task_state.xml
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas 194795416 Oct 12 16:26 HITS.46676269._048872.pool.root.1
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas      1057 Oct 12 16:27 memory_monitor_summary.json
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas    942031 Oct 12 16:27 log.46676269._048872.job.log.tgz.1
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas      7827 Oct 12 16:27 heartbeat.json
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas        95 Oct 12 16:28 pilot_heartbeat.json
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas      4895 Oct 12 16:28 pilotlog.txt
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas   5921526 Oct 12 16:28 log.46676269._048872.job.log.1
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas       357 Oct 12 16:28 output.list
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:28 runtime_log
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas   6881280 Oct 12 16:28 result.tar.gz
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas       653 Oct 12 16:28 dNyMDmgydR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmEwQMDmRrf5Do.diag
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 16:28 runtime_log.err
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:29 boinc_mmap_file
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:29 wrapper_checkpoint.txt
[2025-10-12 16:29:02] -rw-r--r--. 1 boincer umatlas     21014 Oct 12 16:29 stderr.txt
[2025-10-12 16:29:02] HITS file was successfully produced:
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas 194795416 Oct 12 16:26 shared/HITS.pool.root.1
[2025-10-12 16:29:02]  *** Contents of shared directory: ***
[2025-10-12 16:29:02] total 414108
[2025-10-12 16:29:02] -rw-r--r--. 2 boincer umatlas 221766638 Oct 12 00:03 ATLAS.root_0
[2025-10-12 16:29:02] -rw-r--r--. 2 boincer umatlas    569678 Oct 12 00:03 input.tar.gz
[2025-10-12 16:29:02] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 00:03 start_atlas.sh
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas 194795416 Oct 12 16:26 HITS.pool.root.1
[2025-10-12 16:29:02] -rw-------. 1 boincer umatlas   6881280 Oct 12 16:28 result.tar.gz
16:29:04 (136121): run_atlas exited; CPU time 52049.885913
16:29:04 (136121): called boinc_finish(0)

</stderr_txt>
]]>

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