Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:29 (3991667): wrapper (7.7.26015): starting
19:01:29 (3991667): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 19:01:29] Arguments: --nthreads 8
[2025-10-11 19:01:29] Threads: 8
[2025-10-11 19:01:29] Checking for CVMFS
[2025-10-11 19:01:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:01:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:01:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:01:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:01:31] 2.13.2.0 403710 10455 211164 151599 1 417 17130251 32935936 32235 16776704 0 28707526 99.713 22039614 27832 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 19:01:31] CVMFS is ok
[2025-10-11 19:01:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:01:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:01:31] Further information can be found at the LHC@home message board.
[2025-10-11 19:01:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:01:31] Checking for apptainer binary...
[2025-10-11 19:01:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:01:31] Running /usr/bin/apptainer --version
[2025-10-11 19:01:31] apptainer version 1.4.3-1.el9
[2025-10-11 19:01:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:01:32] c-4-40.aglt2.org
[2025-10-11 19:01:32] apptainer works
[2025-10-11 19:01:32] Set ATHENA_PROC_NUMBER=8
[2025-10-11 19:01:32] Set ATHENA_CORE_NUMBER=8
[2025-10-11 19:01:32] Starting ATLAS job with PandaID=6837932164
[2025-10-11 19:01:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:39:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:39:58] 2025-10-12 18:39:07,432 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 14:39:58] 2025-10-12 18:39:07,517 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8769999999977
[2025-10-12 14:39:58] 2025-10-12 18:39:07,553 | INFO     | monitor loop #4037: job 0:6837932164 is in state 'finished'
[2025-10-12 14:39:58] 2025-10-12 18:39:07,554 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:39:58] 2025-10-12 18:39:07,597 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837932164/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:39:58] 2025-10-12 18:39:07,598 | INFO     | extracted standard info from prmon json
[2025-10-12 14:39:58] 2025-10-12 18:39:07,598 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:39:58] 2025-10-12 18:39:07,598 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:39:58] 2025-10-12 18:39:07,644 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:39:58] 2025-10-12 18:39:07,644 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:39:58] 2025-10-12 18:39:07,832 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:39:58] 2025-10-12 18:39:07,834 | INFO     | sum of square deviations: 476537173534.5024
[2025-10-12 14:39:58] 2025-10-12 18:39:08,002 | INFO     | sum of deviations: 711746574209.2466
[2025-10-12 14:39:58] 2025-10-12 18:39:08,006 | INFO     | mean x: 1760259102.8700173
[2025-10-12 14:39:58] 2025-10-12 18:39:08,006 | INFO     | mean y: 2059921.1949740034
[2025-10-12 14:39:58] 2025-10-12 18:39:08,006 | INFO     | -- intersect: -2627028544.025603
[2025-10-12 14:39:58] 2025-10-12 18:39:08,007 | INFO     | intersect: -2627028544.025603
[2025-10-12 14:39:58] 2025-10-12 18:39:08,008 | INFO     | chi2: 7.2347992962122225
[2025-10-12 14:39:58] 2025-10-12 18:39:08,010 | INFO     | sum of square deviations: 470369960226.3146
[2025-10-12 14:39:58] 2025-10-12 18:39:08,060 | INFO     | time since job start (70588s) is within the limit (172800.0s)
[2025-10-12 14:39:58] 2025-10-12 18:39:08,077 | INFO     | sum of deviations: 761592904446.2295
[2025-10-12 14:39:58] 2025-10-12 18:39:08,078 | INFO     | mean x: 1760258950.3716276
[2025-10-12 14:39:58] 2025-10-12 18:39:08,078 | INFO     | mean y: 2061153.7371627502
[2025-10-12 14:39:58] 2025-10-12 18:39:08,078 | INFO     | -- intersect: -2848037364.34418
[2025-10-12 14:39:58] 2025-10-12 18:39:08,078 | INFO     | intersect: -2848037364.34418
[2025-10-12 14:39:58] 2025-10-12 18:39:08,079 | INFO     | chi2: 7.115174696202991
[2025-10-12 14:39:58] 2025-10-12 18:39:08,080 | INFO     | current chi2=7.115174696202991 (change=1.6534612103456832 %)
[2025-10-12 14:39:58] 2025-10-12 18:39:08,084 | INFO     | right removable region: 1148
[2025-10-12 14:39:58] 2025-10-12 18:39:08,086 | INFO     | sum of square deviations: 470369770028.0585
[2025-10-12 14:39:58] 2025-10-12 18:39:08,151 | INFO     | sum of deviations: 465792071204.0914
[2025-10-12 14:39:58] 2025-10-12 18:39:08,151 | INFO     | mean x: 1760259255.370757
[2025-10-12 14:39:58] 2025-10-12 18:39:08,151 | INFO     | mean y: 2065999.3777197562
[2025-10-12 14:39:58] 2025-10-12 18:39:08,151 | INFO     | -- intersect: -1741062187.551485
[2025-10-12 14:39:58] 2025-10-12 18:39:08,151 | INFO     | intersect: -1741062187.551485
[2025-10-12 14:39:58] 2025-10-12 18:39:08,157 | INFO     | chi2: 4.721739430785877
[2025-10-12 14:39:58] 2025-10-12 18:39:08,157 | INFO     | current chi2=4.721739430785877 (change=34.73572330806824 %)
[2025-10-12 14:39:58] 2025-10-12 18:39:08,159 | INFO     | sum of square deviations: 464255809506.11084
[2025-10-12 14:39:58] 2025-10-12 18:39:08,217 | INFO     | sum of deviations: 322153471962.4436
[2025-10-12 14:39:58] 2025-10-12 18:39:08,218 | INFO     | mean x: 1760259407.8715036
[2025-10-12 14:39:58] 2025-10-12 18:39:08,218 | INFO     | mean y: 2069581.3295454546
[2025-10-12 14:39:58] 2025-10-12 18:39:08,218 | INFO     | -- intersect: -1219398557.978458
[2025-10-12 14:39:58] 2025-10-12 18:39:08,218 | INFO     | intersect: -1219398557.978458
[2025-10-12 14:39:58] 2025-10-12 18:39:08,220 | INFO     | chi2: 3.89615582940794
[2025-10-12 14:39:58] 2025-10-12 18:39:08,220 | INFO     | current chi2=3.89615582940794 (change=17.484734460252252 %)
[2025-10-12 14:39:58] 2025-10-12 18:39:08,220 | INFO     | left removable region: 20
[2025-10-12 14:39:58] 2025-10-12 18:39:08,221 | INFO     | sum of square deviations: 445047928324.8714
[2025-10-12 14:39:58] 2025-10-12 18:39:08,252 | INFO     | sum of deviations: 88755494979.35817
[2025-10-12 14:39:58] 2025-10-12 18:39:08,252 | INFO     | mean x: 1760259529.873227
[2025-10-12 14:39:58] 2025-10-12 18:39:08,252 | INFO     | mean y: 2078681.429078014
[2025-10-12 14:39:58] 2025-10-12 18:39:08,252 | INFO     | -- intersect: -348968241.6609345
[2025-10-12 14:39:58] 2025-10-12 18:39:08,253 | INFO     | intersect: -348968241.6609345
[2025-10-12 14:39:58] 2025-10-12 18:39:08,254 | INFO     | chi2: 2.0482007876612633
[2025-10-12 14:39:58] 2025-10-12 18:39:08,254 | INFO     | -- intersect: -348968241.6609345
[2025-10-12 14:39:58] 2025-10-12 18:39:08,255 | INFO     | current memory leak: 0.20 B/s (using 1128 data points, chi2=2.05)
[2025-10-12 14:39:58] 2025-10-12 18:39:08,256 | INFO     | could have reported an average CPU frequency of 2600 MHz (42 samples)
[2025-10-12 14:39:58] 2025-10-12 18:39:08,256 | INFO     | ..............................
[2025-10-12 14:39:58] 2025-10-12 18:39:08,256 | INFO     | . Timing measurements:
[2025-10-12 14:39:58] 2025-10-12 18:39:08,256 | INFO     | . get job = 0 s
[2025-10-12 14:39:58] 2025-10-12 18:39:08,256 | INFO     | . initial setup = 9 s
[2025-10-12 14:39:58] 2025-10-12 18:39:08,257 | INFO     | . payload setup = 53 s
[2025-10-12 14:39:58] 2025-10-12 18:39:08,257 | INFO     | . stage-in = 0 s
[2025-10-12 14:39:58] 2025-10-12 18:39:08,257 | INFO     | . payload execution = 70416 s
[2025-10-12 14:39:58] 2025-10-12 18:39:08,257 | INFO     | . stage-out = 3 s
[2025-10-12 14:39:58] 2025-10-12 18:39:08,257 | INFO     | . log creation = 1 s
[2025-10-12 14:39:58] 2025-10-12 18:39:08,257 | INFO     | ..............................
[2025-10-12 14:39:58] 2025-10-12 18:39:08,365 | INFO     | 
[2025-10-12 14:39:58] 2025-10-12 18:39:08,365 | INFO     | job summary report
[2025-10-12 14:39:58] 2025-10-12 18:39:08,365 | INFO     | --------------------------------------------------
[2025-10-12 14:39:58] 2025-10-12 18:39:08,365 | INFO     | PanDA job id: 6837932164
[2025-10-12 14:39:58] 2025-10-12 18:39:08,365 | INFO     | task id: 46676269
[2025-10-12 14:39:58] 2025-10-12 18:39:08,365 | INFO     | errors: (none)
[2025-10-12 14:39:58] 2025-10-12 18:39:08,365 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | pilot state: finished 
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | transexitcode: 0
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | exeerrorcode: 0
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | exeerrordiag: 
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | exitcode: 0
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | exitmsg: OK
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | cpuconsumptiontime: 51263 s
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | nevents: 400
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | neventsw: 0
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | pid: 4008005
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | pgrp: 4008005
[2025-10-12 14:39:58] 2025-10-12 18:39:08,366 | INFO     | corecount: 8
[2025-10-12 14:39:58] 2025-10-12 18:39:08,367 | INFO     | event service: False
[2025-10-12 14:39:58] 2025-10-12 18:39:08,367 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348742, 4: 2348913, 5: 2348941, 16: 2349125, 27: 2349153, 38: 2349471, 49: 2349471, 70473: 2405418, 70474: 2405697,
[2025-10-12 14:39:58] 2025-10-12 18:39:08,367 | INFO     | --------------------------------------------------
[2025-10-12 14:39:58] 2025-10-12 18:39:08,367 | INFO     | 
[2025-10-12 14:39:58] 2025-10-12 18:39:08,367 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:39:58] 2025-10-12 18:39:08,386 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,387 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,387 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,388 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:39:58] 2025-10-12 18:39:08,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,389 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:39:58] 2025-10-12 18:39:08,389 | INFO     | job 6837932164 has completed (purged errors)
[2025-10-12 14:39:58] 2025-10-12 18:39:08,389 | INFO     | overall cleanup function is called
[2025-10-12 14:39:58] 2025-10-12 18:39:09,400 | INFO     | --- collectZombieJob: --- 10, [4008005]
[2025-10-12 14:39:58] 2025-10-12 18:39:09,401 | INFO     | zombie collector waiting for pid 4008005
[2025-10-12 14:39:58] 2025-10-12 18:39:09,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:39:58] 2025-10-12 18:39:09,401 | INFO     | collected zombie processes
[2025-10-12 14:39:58] 2025-10-12 18:39:09,401 | INFO     | will attempt to kill all subprocesses of pid=4008005
[2025-10-12 14:39:58] 2025-10-12 18:39:09,941 | INFO     | process IDs to be killed: [4008005] (in reverse order)
[2025-10-12 14:39:58] 2025-10-12 18:39:10,087 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:39:58] 2025-10-12 18:39:10,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:39:58] 2025-10-12 18:39:10,103 | INFO     | did not find any defunct processes belonging to 4008005
[2025-10-12 14:39:58] 2025-10-12 18:39:10,132 | INFO     | did not find any defunct processes belonging to 4008005
[2025-10-12 14:39:58] 2025-10-12 18:39:10,132 | INFO     | ready for new job
[2025-10-12 14:39:58] 2025-10-12 18:39:10,133 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:39:58] 2025-10-12 18:39:10,137 | INFO     | ***************************************
[2025-10-12 14:39:58] 2025-10-12 18:39:10,137 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:39:58] 2025-10-12 18:39:10,137 | INFO     | ***************************************
[2025-10-12 14:39:58] 2025-10-12 18:39:10,137 | INFO     | 
[2025-10-12 14:39:58] 2025-10-12 18:39:10,139 | INFO     | architecture information:
[2025-10-12 14:39:58] 2025-10-12 18:39:10,140 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:39:58] 2025-10-12 18:39:10,170 | INFO     | cat /etc/os-release:
[2025-10-12 14:39:58] NAME="CentOS Linux"
[2025-10-12 14:39:58] VERSION="7 (Core)"
[2025-10-12 14:39:58] ID="centos"
[2025-10-12 14:39:58] ID_LIKE="rhel fedora"
[2025-10-12 14:39:58] VERSION_ID="7"
[2025-10-12 14:39:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:39:58] ANSI_COLOR="0;31"
[2025-10-12 14:39:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:39:58] HOME_URL="https://www.centos.org/"
[2025-10-12 14:39:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:39:58] 
[2025-10-12 14:39:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:39:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:39:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:39:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:39:58] 
[2025-10-12 14:39:58] 2025-10-12 18:39:10,171 | INFO     | ***************************************
[2025-10-12 14:39:58] 2025-10-12 18:39:10,674 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:39:58] 2025-10-12 18:39:10,840 | INFO     | sufficient remaining disk space (74473013248 B)
[2025-10-12 14:39:58] 2025-10-12 18:39:10,840 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:39:58] 2025-10-12 18:39:10,840 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:39:58] 2025-10-12 18:39:10,840 | INFO     | update_server=False
[2025-10-12 14:39:58] 2025-10-12 18:39:10,840 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:39:58] 2025-10-12 18:39:10,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:39:58] 2025-10-12 18:39:11,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:39:58] 2025-10-12 18:39:11,069 | INFO     | aborting loop
[2025-10-12 14:39:58] 2025-10-12 18:39:11,201 | INFO     | all data control threads have been joined
[2025-10-12 14:39:58] 2025-10-12 18:39:11,229 | INFO     | all job control threads have been joined
[2025-10-12 14:39:58] 2025-10-12 18:39:11,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:39:58] 2025-10-12 18:39:11,830 | INFO     | all payload control threads have been joined
[2025-10-12 14:39:58] 2025-10-12 18:39:11,846 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,075 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,078 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,207 | INFO     | [data] control thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,220 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,235 | INFO     | [job] control thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,388 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,427 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,801 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,836 | INFO     | [payload] control thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,879 | INFO     | [job] validate thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:12,977 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:13,379 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:39:58] 2025-10-12 18:39:13,416 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:13,456 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:14,385 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:14,892 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:39:58] 2025-10-12 18:39:41,885 | INFO     | PID=3996754 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:39:58] 2025-10-12 18:39:41,885 | INFO     | .. there are 41 such processes running
[2025-10-12 14:39:58] 2025-10-12 18:39:41,885 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:39:58] 2025-10-12 18:39:41,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:39:58] 2025-10-12 18:39:41,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:39:58] 2025-10-12 18:39:51,302 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:39:58] 2025-10-12 18:39:52,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140353678157632)>', '<ExcThread(monitor, started 140352870668032)>']
[2025-10-12 14:39:58] 2025-10-12 18:39:52,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:39:58] 2025-10-12 18:39:52,953 | INFO     | [monitor] control thread has ended
[2025-10-12 14:39:58] 2025-10-12 18:39:57,142 | INFO     | all workflow threads have been joined
[2025-10-12 14:39:58] 2025-10-12 18:39:57,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:39:58] 2025-10-12 18:39:57,142 | INFO     | traces error code: 0
[2025-10-12 14:39:58] 2025-10-12 18:39:57,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:39:58] 2025-10-12 18:39:57,369 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:39:58] 2025-10-12 18:39:57,373 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:39:58] 2025-10-12 18:39:57,376 [wrapper] pilotpid: 3996754
[2025-10-12 14:39:58] 2025-10-12 18:39:57,383 [wrapper] Pilot exit status: 0
[2025-10-12 14:39:58] 2025-10-12 18:39:57,501 [wrapper] pandaids: 6837932164
[2025-10-12 14:39:58] 2025-10-12 18:39:57,694 [wrapper] cleanup supervisor_pilot 3302880 3996755
[2025-10-12 14:39:58] 2025-10-12 18:39:57,725 [wrapper] Test setup, not cleaning
[2025-10-12 14:39:58] 2025-10-12 18:39:57,774 [wrapper] apfmon messages muted
[2025-10-12 14:39:58] 2025-10-12 18:39:57,795 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:39:58] 2025-10-12 18:39:57,798 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:39:58]  *** Error codes and diagnostics ***
[2025-10-12 14:39:58]     "exeErrorCode": 0,
[2025-10-12 14:39:58]     "exeErrorDiag": "",
[2025-10-12 14:39:58]     "pilotErrorCode": 0,
[2025-10-12 14:39:58]     "pilotErrorDiag": "",
[2025-10-12 14:39:58]  *** Listing of results directory ***
[2025-10-12 14:39:58] total 427276
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-12 14:39:58] -rwx------. 1 boincer umatlas     36292 Oct 10 21:52 runpilot2-wrapper.sh
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:52 queuedata.json
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas       100 Oct 11 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:39:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 19:01 run_atlas
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas       105 Oct 11 19:01 job.xml
[2025-10-12 14:39:58] -rw-r--r--. 2 boincer umatlas 221396739 Oct 11 19:01 EVNT.46676267._001966.pool.root.1
[2025-10-12 14:39:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:01 start_atlas.sh
[2025-10-12 14:39:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 19:01 shared
[2025-10-12 14:39:58] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 19:01 input.tar.gz
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas         0 Oct 11 19:01 boinc_lockfile
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 19:01 pandaJob.out
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas    975520 Oct 11 19:02 agis_schedconf.cvmfs.json
[2025-10-12 14:39:58] drwx------. 5 boincer umatlas      4096 Oct 11 19:02 pilot3
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas      6657 Oct 12 14:36 init_data.xml
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas 192955523 Oct 12 14:37 HITS.46676269._048746.pool.root.1
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas       531 Oct 12 14:37 boinc_task_state.xml
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas      1054 Oct 12 14:38 memory_monitor_summary.json
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas   1155761 Oct 12 14:38 log.46676269._048746.job.log.tgz.1
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas        95 Oct 12 14:39 pilot_heartbeat.json
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas      7845 Oct 12 14:39 heartbeat.json
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas      4824 Oct 12 14:39 pilotlog.txt
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas        28 Oct 12 14:39 wrapper_checkpoint.txt
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:39 boinc_mmap_file
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas   8476402 Oct 12 14:39 log.46676269._048746.job.log.1
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas       357 Oct 12 14:39 output.list
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:39 runtime_log
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas   9656320 Oct 12 14:39 result.tar.gz
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas      8694 Oct 12 14:39 runtime_log.err
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas       660 Oct 12 14:39 hlzKDmZxdR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmk3eNDm07XYen.diag
[2025-10-12 14:39:58] -rw-r--r--. 1 boincer umatlas     21241 Oct 12 14:39 stderr.txt
[2025-10-12 14:39:58] HITS file was successfully produced:
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas 192955523 Oct 12 14:37 shared/HITS.pool.root.1
[2025-10-12 14:39:58]  *** Contents of shared directory: ***
[2025-10-12 14:39:58] total 414660
[2025-10-12 14:39:58] -rw-r--r--. 2 boincer umatlas 221396739 Oct 11 19:01 ATLAS.root_0
[2025-10-12 14:39:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 19:01 start_atlas.sh
[2025-10-12 14:39:58] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 19:01 input.tar.gz
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas 192955523 Oct 12 14:37 HITS.pool.root.1
[2025-10-12 14:39:58] -rw-------. 1 boincer umatlas   9656320 Oct 12 14:39 result.tar.gz
14:40:00 (3991667): run_atlas exited; CPU time 54533.439024
14:40:00 (3991667): called boinc_finish(0)

</stderr_txt>
]]>

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