Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:50 (99800): wrapper (7.7.26015): starting
00:02:50 (99800): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:02:50] Arguments: --nthreads 9
[2025-10-11 00:02:50] Threads: 9
[2025-10-11 00:02:50] Checking for CVMFS
[2025-10-11 00:02:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:02:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:02:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:02:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:02:54] 2.13.2.0 123651 107205 315860 151571 3 26 26499718 39288832 9797 16776704 0 49401811 99.738 39794536 35526 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:02:54] CVMFS is ok
[2025-10-11 00:02:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:02:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:02:54] Further information can be found at the LHC@home message board.
[2025-10-11 00:02:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:02:54] Checking for apptainer binary...
[2025-10-11 00:02:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:02:54] Running /usr/bin/apptainer --version
[2025-10-11 00:02:54] apptainer version 1.4.3-1.el9
[2025-10-11 00:02:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:02:55] c-211-19.aglt2.org
[2025-10-11 00:02:55] apptainer works
[2025-10-11 00:02:56] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:02:56] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:02:56] Starting ATLAS job with PandaID=6837932241
[2025-10-11 00:02:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:54:46]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:54:46] 2025-10-11 21:44:30,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 21:54:46] 2025-10-11 21:44:30,787 | INFO     | sum of deviations: 2441094707473.7144
[2025-10-11 21:54:46] 2025-10-11 21:44:30,787 | INFO     | mean x: 1760187245.7519379
[2025-10-11 21:54:46] 2025-10-11 21:44:30,829 | INFO     | mean y: 2481307.8934108526
[2025-10-11 21:54:46] 2025-10-11 21:44:30,829 | INFO     | -- intersect: -12605611881.75781
[2025-10-11 21:54:46] 2025-10-11 21:44:30,829 | INFO     | intersect: -12605611881.75781
[2025-10-11 21:54:46] 2025-10-11 21:44:30,831 | INFO     | chi2: 11.676134318047694
[2025-10-11 21:54:46] 2025-10-11 21:44:30,831 | INFO     | current chi2=11.676134318047694 (change=22.85807205973387 %)
[2025-10-11 21:54:46] 2025-10-11 21:44:30,831 | INFO     | right removable region: 1031
[2025-10-11 21:54:46] 2025-10-11 21:44:30,863 | INFO     | sum of square deviations: 340793765281.5
[2025-10-11 21:54:46] 2025-10-11 21:44:31,378 | INFO     | sum of deviations: 1766941255578.003
[2025-10-11 21:54:46] 2025-10-11 21:44:31,378 | INFO     | mean x: 1760187550.75
[2025-10-11 21:54:46] 2025-10-11 21:44:31,378 | INFO     | mean y: 2482187.903100775
[2025-10-11 21:54:46] 2025-10-11 21:44:31,378 | INFO     | -- intersect: -9123705899.504992
[2025-10-11 21:54:46] 2025-10-11 21:44:31,378 | INFO     | intersect: -9123705899.504992
[2025-10-11 21:54:46] 2025-10-11 21:44:31,380 | INFO     | chi2: 10.931681712394479
[2025-10-11 21:54:46] 2025-10-11 21:44:31,380 | INFO     | current chi2=10.931681712394479 (change=27.776524322780983 %)
[2025-10-11 21:54:46] 2025-10-11 21:44:31,409 | INFO     | sum of square deviations: 335863138533.4897
[2025-10-11 21:54:46] 2025-10-11 21:44:31,816 | INFO     | sum of deviations: 1474794269873.8865
[2025-10-11 21:54:46] 2025-10-11 21:44:31,817 | INFO     | mean x: 1760187703.2638752
[2025-10-11 21:54:46] 2025-10-11 21:44:31,817 | INFO     | mean y: 2491224.077896787
[2025-10-11 21:54:46] 2025-10-11 21:44:31,817 | INFO     | -- intersect: -7726593753.841451
[2025-10-11 21:54:46] 2025-10-11 21:44:31,817 | INFO     | intersect: -7726593753.841451
[2025-10-11 21:54:46] 2025-10-11 21:44:31,819 | INFO     | chi2: 8.166851125520804
[2025-10-11 21:54:46] 2025-10-11 21:44:31,819 | INFO     | current chi2=8.166851125520804 (change=25.291905304367535 %)
[2025-10-11 21:54:46] 2025-10-11 21:44:31,869 | INFO     | sum of square deviations: 330980342409.13477
[2025-10-11 21:54:46] 2025-10-11 21:44:31,931 | INFO     | time since job start (63556s) is within the limit (172800.0s)
[2025-10-11 21:54:46] 2025-10-11 21:44:31,964 | INFO     | sum of deviations: 1215149167162.3733
[2025-10-11 21:54:46] 2025-10-11 21:44:31,965 | INFO     | mean x: 1760187855.776908
[2025-10-11 21:54:46] 2025-10-11 21:44:31,965 | INFO     | mean y: 2499332.668297456
[2025-10-11 21:54:46] 2025-10-11 21:44:31,965 | INFO     | -- intersect: -6459790214.282155
[2025-10-11 21:54:46] 2025-10-11 21:44:31,965 | INFO     | intersect: -6459790214.282155
[2025-10-11 21:54:46] 2025-10-11 21:44:31,967 | INFO     | chi2: 6.0339118623866455
[2025-10-11 21:54:46] 2025-10-11 21:44:31,967 | INFO     | current chi2=6.0339118623866455 (change=26.1170337300368 %)
[2025-10-11 21:54:46] 2025-10-11 21:44:31,973 | INFO     | sum of square deviations: 326145269710.1617
[2025-10-11 21:54:46] 2025-10-11 21:44:32,077 | INFO     | sum of deviations: 1029920068892.3467
[2025-10-11 21:54:46] 2025-10-11 21:44:32,077 | INFO     | mean x: 1760188008.287119
[2025-10-11 21:54:46] 2025-10-11 21:44:32,077 | INFO     | mean y: 2505173.156342183
[2025-10-11 21:54:46] 2025-10-11 21:44:32,078 | INFO     | -- intersect: -5555916558.26903
[2025-10-11 21:54:46] 2025-10-11 21:44:32,078 | INFO     | intersect: -5555916558.26903
[2025-10-11 21:54:46] 2025-10-11 21:44:32,079 | INFO     | chi2: 4.993501514673728
[2025-10-11 21:54:46] 2025-10-11 21:44:32,080 | INFO     | current chi2=4.993501514673728 (change=17.242717020752025 %)
[2025-10-11 21:54:46] 2025-10-11 21:44:32,080 | INFO     | left removable region: 40
[2025-10-11 21:54:46] 2025-10-11 21:44:32,081 | INFO     | sum of square deviations: 301762902469.43097
[2025-10-11 21:54:46] 2025-10-11 21:44:32,335 | INFO     | sum of deviations: 1006436928562.3655
[2025-10-11 21:54:46] 2025-10-11 21:44:32,335 | INFO     | mean x: 1760188435.3370333
[2025-10-11 21:54:46] 2025-10-11 21:44:32,335 | INFO     | mean y: 2526565.3551967707
[2025-10-11 21:54:46] 2025-10-11 21:44:32,335 | INFO     | -- intersect: -5868038133.137048
[2025-10-11 21:54:46] 2025-10-11 21:44:32,336 | INFO     | intersect: -5868038133.137048
[2025-10-11 21:54:46] 2025-10-11 21:44:32,344 | INFO     | chi2: 0.7107203820579686
[2025-10-11 21:54:46] 2025-10-11 21:44:32,345 | INFO     | -- intersect: -5868038133.137048
[2025-10-11 21:54:46] 2025-10-11 21:44:32,345 | INFO     | current memory leak: 3.34 B/s (using 991 data points, chi2=0.71)
[2025-10-11 21:54:46] 2025-10-11 21:44:32,346 | INFO     | could have reported an average CPU frequency of 2900 MHz (37 samples)
[2025-10-11 21:54:46] 2025-10-11 21:44:32,346 | INFO     | ..............................
[2025-10-11 21:54:46] 2025-10-11 21:44:32,346 | INFO     | . Timing measurements:
[2025-10-11 21:54:46] 2025-10-11 21:44:32,347 | INFO     | . get job = 1 s
[2025-10-11 21:54:46] 2025-10-11 21:44:32,347 | INFO     | . initial setup = 14 s
[2025-10-11 21:54:46] 2025-10-11 21:44:32,347 | INFO     | . payload setup = 84 s
[2025-10-11 21:54:46] 2025-10-11 21:44:32,347 | INFO     | . stage-in = 1 s
[2025-10-11 21:54:46] 2025-10-11 21:44:32,401 | INFO     | . payload execution = 63300 s
[2025-10-11 21:54:46] 2025-10-11 21:44:32,402 | INFO     | . stage-out = 6 s
[2025-10-11 21:54:46] 2025-10-11 21:44:32,402 | INFO     | . log creation = 0 s
[2025-10-11 21:54:46] 2025-10-11 21:44:32,402 | INFO     | ..............................
[2025-10-11 21:54:46] 2025-10-11 21:44:33,764 | INFO     | 
[2025-10-11 21:54:46] 2025-10-11 21:44:33,768 | INFO     | job summary report
[2025-10-11 21:54:46] 2025-10-11 21:44:33,768 | INFO     | --------------------------------------------------
[2025-10-11 21:54:46] 2025-10-11 21:44:33,768 | INFO     | PanDA job id: 6837932241
[2025-10-11 21:54:46] 2025-10-11 21:44:33,768 | INFO     | task id: 46676269
[2025-10-11 21:54:46] 2025-10-11 21:44:33,769 | INFO     | errors: (none)
[2025-10-11 21:54:46] 2025-10-11 21:44:33,769 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:54:46] 2025-10-11 21:44:33,769 | INFO     | pilot state: finished 
[2025-10-11 21:54:46] 2025-10-11 21:44:33,769 | INFO     | transexitcode: 0
[2025-10-11 21:54:46] 2025-10-11 21:44:33,769 | INFO     | exeerrorcode: 0
[2025-10-11 21:54:46] 2025-10-11 21:44:33,769 | INFO     | exeerrordiag: 
[2025-10-11 21:54:46] 2025-10-11 21:44:33,769 | INFO     | exitcode: 0
[2025-10-11 21:54:46] 2025-10-11 21:44:33,770 | INFO     | exitmsg: OK
[2025-10-11 21:54:46] 2025-10-11 21:44:33,770 | INFO     | cpuconsumptiontime: 85534 s
[2025-10-11 21:54:46] 2025-10-11 21:44:33,770 | INFO     | nevents: 400
[2025-10-11 21:54:46] 2025-10-11 21:44:33,770 | INFO     | neventsw: 0
[2025-10-11 21:54:46] 2025-10-11 21:44:33,775 | INFO     | pid: 125552
[2025-10-11 21:54:46] 2025-10-11 21:44:33,775 | INFO     | pgrp: 125552
[2025-10-11 21:54:46] 2025-10-11 21:44:33,775 | INFO     | corecount: 9
[2025-10-11 21:54:46] 2025-10-11 21:44:33,775 | INFO     | event service: False
[2025-10-11 21:54:46] 2025-10-11 21:44:33,775 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348742, 5: 2348941, 8: 2348997, 10: 2349153, 21: 2349181, 33: 2349209, 44: 2349265, 56: 2349293, 67: 2349601, 74: 2
[2025-10-11 21:54:46] 2025-10-11 21:44:33,775 | INFO     | --------------------------------------------------
[2025-10-11 21:54:46] 2025-10-11 21:44:33,776 | INFO     | 
[2025-10-11 21:54:46] 2025-10-11 21:44:33,776 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 21:54:46] 2025-10-11 21:44:33,945 | INFO     | time since job start (63558s) is within the limit (172800.0s)
[2025-10-11 21:54:46] 2025-10-11 21:44:33,945 | INFO     | 63574s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 21:54:46] 2025-10-11 21:44:34,018 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,018 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,018 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,018 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,019 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,019 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,019 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,019 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,019 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,019 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,019 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,020 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,020 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,020 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,020 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,020 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,020 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:54:46] 2025-10-11 21:44:34,020 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,021 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:54:46] 2025-10-11 21:44:34,021 | INFO     | job 6837932241 has completed (purged errors)
[2025-10-11 21:54:46] 2025-10-11 21:44:34,021 | INFO     | overall cleanup function is called
[2025-10-11 21:54:46] 2025-10-11 21:44:35,082 | INFO     | --- collectZombieJob: --- 10, [125552]
[2025-10-11 21:54:46] 2025-10-11 21:44:35,083 | INFO     | zombie collector waiting for pid 125552
[2025-10-11 21:54:46] 2025-10-11 21:44:35,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:54:46] 2025-10-11 21:44:35,083 | INFO     | collected zombie processes
[2025-10-11 21:54:46] 2025-10-11 21:44:35,083 | INFO     | will attempt to kill all subprocesses of pid=125552
[2025-10-11 21:54:46] 2025-10-11 21:44:35,706 | INFO     | process IDs to be killed: [125552] (in reverse order)
[2025-10-11 21:54:46] 2025-10-11 21:44:36,352 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:54:46] 2025-10-11 21:44:36,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:54:46] 2025-10-11 21:44:36,374 | INFO     | did not find any defunct processes belonging to 125552
[2025-10-11 21:54:46] 2025-10-11 21:44:36,404 | INFO     | did not find any defunct processes belonging to 125552
[2025-10-11 21:54:46] 2025-10-11 21:44:36,404 | INFO     | ready for new job
[2025-10-11 21:54:46] 2025-10-11 21:44:36,405 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:54:46] 2025-10-11 21:44:36,410 | INFO     | ***************************************
[2025-10-11 21:54:46] 2025-10-11 21:44:36,410 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 21:54:46] 2025-10-11 21:44:36,410 | INFO     | ***************************************
[2025-10-11 21:54:46] 2025-10-11 21:44:36,410 | INFO     | 
[2025-10-11 21:54:46] 2025-10-11 21:44:36,413 | INFO     | architecture information:
[2025-10-11 21:54:46] 2025-10-11 21:44:36,413 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:54:46] 2025-10-11 21:44:36,435 | INFO     | cat /etc/os-release:
[2025-10-11 21:54:46] NAME="CentOS Linux"
[2025-10-11 21:54:46] VERSION="7 (Core)"
[2025-10-11 21:54:46] ID="centos"
[2025-10-11 21:54:46] ID_LIKE="rhel fedora"
[2025-10-11 21:54:46] VERSION_ID="7"
[2025-10-11 21:54:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:54:46] ANSI_COLOR="0;31"
[2025-10-11 21:54:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:54:46] HOME_URL="https://www.centos.org/"
[2025-10-11 21:54:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:54:46] 
[2025-10-11 21:54:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:54:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:54:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:54:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:54:46] 
[2025-10-11 21:54:46] 2025-10-11 21:44:36,435 | INFO     | ***************************************
[2025-10-11 21:54:46] 2025-10-11 21:44:36,939 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 21:54:46] 2025-10-11 21:44:37,113 | INFO     | sufficient remaining disk space (52440334336 B)
[2025-10-11 21:54:46] 2025-10-11 21:44:37,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:54:46] 2025-10-11 21:44:37,114 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:54:46] 2025-10-11 21:44:37,114 | INFO     | update_server=False
[2025-10-11 21:54:46] 2025-10-11 21:44:37,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:54:46] 2025-10-11 21:44:37,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:54:46] 2025-10-11 21:44:37,115 | INFO     | aborting loop
[2025-10-11 21:54:46] 2025-10-11 21:44:37,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:54:46] 2025-10-11 21:44:37,690 | INFO     | all data control threads have been joined
[2025-10-11 21:54:46] 2025-10-11 21:44:37,691 | INFO     | all job control threads have been joined
[2025-10-11 21:54:46] 2025-10-11 21:44:37,914 | INFO     | all payload control threads have been joined
[2025-10-11 21:54:46] 2025-10-11 21:44:38,121 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:38,127 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:38,697 | INFO     | [data] control thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:38,697 | INFO     | [job] control thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:38,712 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:38,712 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:38,714 | INFO     | [job] validate thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:38,787 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:38,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:54:46] 2025-10-11 21:44:38,921 | INFO     | [payload] control thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:39,071 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:39,129 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:39,292 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:39,294 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:39,428 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:39,771 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:54:46] 2025-10-11 21:44:39,833 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:44:43,802 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:54:46] 2025-10-11 21:45:07,377 | INFO     | PID=111144 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 21:54:46] 2025-10-11 21:45:07,378 | INFO     | .. there are 8 such processes running
[2025-10-11 21:54:46] 2025-10-11 21:45:07,378 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:54:46] 2025-10-11 21:45:07,378 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:54:46] 2025-10-11 21:45:07,378 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:54:46] 2025-10-11 21:45:29,580 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:54:46] 2025-10-11 21:45:31,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501772273472)>', '<ExcThread(monitor, started 140501416122112)>']
[2025-10-11 21:54:46] 2025-10-11 21:45:31,574 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:54:46] 2025-10-11 21:45:31,575 | INFO     | [monitor] control thread has ended
[2025-10-11 21:54:46] 2025-10-11 21:45:36,077 | INFO     | all workflow threads have been joined
[2025-10-11 21:54:46] 2025-10-11 21:45:36,078 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:54:46] 2025-10-11 21:45:36,078 | INFO     | traces error code: 0
[2025-10-11 21:54:46] 2025-10-11 21:45:36,078 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:54:46] 2025-10-11 21:45:36,488 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:54:46] 2025-10-11 21:45:36,491 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:54:46] 2025-10-11 21:45:36,498 [wrapper] pilotpid: 111144
[2025-10-11 21:54:46] 2025-10-11 21:45:36,503 [wrapper] Pilot exit status: 0
[2025-10-11 21:54:46] 2025-10-11 21:45:36,523 [wrapper] pandaids: 6837932241
[2025-10-11 21:54:46] 2025-10-11 21:45:36,603 [wrapper] cleanup supervisor_pilot 1507528 111145
[2025-10-11 21:54:46] 2025-10-11 21:45:36,608 [wrapper] Test setup, not cleaning
[2025-10-11 21:54:46] 2025-10-11 21:45:36,615 [wrapper] apfmon messages muted
[2025-10-11 21:54:46] 2025-10-11 21:45:36,619 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:54:46] 2025-10-11 21:45:36,623 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:54:46]  *** Error codes and diagnostics ***
[2025-10-11 21:54:46]     "exeErrorCode": 0,
[2025-10-11 21:54:46]     "exeErrorDiag": "",
[2025-10-11 21:54:46]     "pilotErrorCode": 0,
[2025-10-11 21:54:46]     "pilotErrorDiag": "",
[2025-10-11 21:54:46]  *** Listing of results directory ***
[2025-10-11 21:54:46] total 430852
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-11 21:54:46] -rwx------. 1 boincer umatlas     36292 Oct 10 21:52 runpilot2-wrapper.sh
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:52 queuedata.json
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:54:46] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:02 run_atlas
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:02 job.xml
[2025-10-11 21:54:46] -rw-r--r--. 2 boincer umatlas 221396739 Oct 11 00:02 EVNT.46676267._001966.pool.root.1
[2025-10-11 21:54:46] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 00:02 input.tar.gz
[2025-10-11 21:54:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 21:54:46] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:02 shared
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:02 boinc_lockfile
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:02 pandaJob.out
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas    975509 Oct 11 00:05 agis_schedconf.cvmfs.json
[2025-10-11 21:54:46] drwx------. 5 boincer umatlas      4096 Oct 11 00:05 pilot3
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas 199866898 Oct 11 17:38 HITS.46676269._048759.pool.root.1
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas       530 Oct 11 17:38 boinc_task_state.xml
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas      1053 Oct 11 17:43 memory_monitor_summary.json
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas   1560580 Oct 11 17:44 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas   1041889 Oct 11 17:44 log.46676269._048759.job.log.tgz.1
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas        95 Oct 11 17:44 pilot_heartbeat.json
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas      7825 Oct 11 17:44 heartbeat.json
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas      4822 Oct 11 17:45 pilotlog.txt
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas   6971395 Oct 11 17:45 log.46676269._048759.job.log.1
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas       357 Oct 11 17:45 output.list
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas       620 Oct 11 17:45 runtime_log
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas   8028160 Oct 11 17:45 result.tar.gz
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 17:45 runtime_log.err
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas       658 Oct 11 17:45 dqTLDmZxdR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmx3eNDmDk6bHm.diag
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas      6523 Oct 11 21:54 init_data.xml
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas        27 Oct 11 21:54 wrapper_checkpoint.txt
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 21:54 boinc_mmap_file
[2025-10-11 21:54:46] -rw-r--r--. 1 boincer umatlas     21151 Oct 11 21:54 stderr.txt
[2025-10-11 21:54:46] HITS file was successfully produced:
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas 199866898 Oct 11 17:38 shared/HITS.pool.root.1
[2025-10-11 21:54:46]  *** Contents of shared directory: ***
[2025-10-11 21:54:46] total 419816
[2025-10-11 21:54:46] -rw-r--r--. 2 boincer umatlas 221396739 Oct 11 00:02 ATLAS.root_0
[2025-10-11 21:54:46] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 00:02 input.tar.gz
[2025-10-11 21:54:46] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas 199866898 Oct 11 17:38 HITS.pool.root.1
[2025-10-11 21:54:46] -rw-------. 1 boincer umatlas   8028160 Oct 11 17:45 result.tar.gz
21:54:47 (99800): run_atlas exited; CPU time 87521.415503
21:54:47 (99800): called boinc_finish(0)

</stderr_txt>
]]>

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