Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:29 (720092): wrapper (7.7.26015): starting
00:02:29 (720092): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:02:29] Arguments: --nthreads 9
[2025-10-11 00:02:29] Threads: 9
[2025-10-11 00:02:29] Checking for CVMFS
[2025-10-11 00:02:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:02:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:02:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:02:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:02:31] 2.13.2.0 1056763 127316 285792 151571 1 153 24891431 32935936 27328 16776704 0 98791237 99.637 92114475 27735 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:02:31] CVMFS is ok
[2025-10-11 00:02:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:02:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:02:31] Further information can be found at the LHC@home message board.
[2025-10-11 00:02:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:02:31] Checking for apptainer binary...
[2025-10-11 00:02:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:02:31] Running /usr/bin/apptainer --version
[2025-10-11 00:02:31] apptainer version 1.4.3-1.el9
[2025-10-11 00:02:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:02:32] c-4-39.aglt2.org
[2025-10-11 00:02:32] apptainer works
[2025-10-11 00:02:32] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:02:32] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:02:32] Starting ATLAS job with PandaID=6837932136
[2025-10-11 00:02:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 23:16:01]  *** The last 200 lines of the pilot log: ***
[2025-10-11 23:16:01] 2025-10-12 03:15:24,654 | INFO     | monitor loop #3347: job 0:6837932136 is in state 'finished'
[2025-10-11 23:16:01] 2025-10-12 03:15:24,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 23:16:01] 2025-10-12 03:15:24,714 | INFO     | sum of deviations: 2169910403532.1846
[2025-10-11 23:16:01] 2025-10-12 03:15:24,714 | INFO     | mean x: 1760197246.8609078
[2025-10-11 23:16:01] 2025-10-12 03:15:24,714 | INFO     | mean y: 2141977.574670571
[2025-10-11 23:16:01] 2025-10-12 03:15:24,715 | INFO     | -- intersect: -4830388851.654706
[2025-10-11 23:16:01] 2025-10-12 03:15:24,715 | INFO     | intersect: -4830388851.654706
[2025-10-11 23:16:01] 2025-10-12 03:15:24,717 | INFO     | chi2: 9.936740933831258
[2025-10-11 23:16:01] 2025-10-12 03:15:24,723 | INFO     | sum of square deviations: 781719153951.8645
[2025-10-11 23:16:01] 2025-10-12 03:15:24,908 | INFO     | sum of deviations: 2245843691053.4766
[2025-10-11 23:16:01] 2025-10-12 03:15:24,909 | INFO     | mean x: 1760197094.360764
[2025-10-11 23:16:01] 2025-10-12 03:15:24,909 | INFO     | mean y: 2143313.3085966203
[2025-10-11 23:16:01] 2025-10-12 03:15:24,909 | INFO     | -- intersect: -5054823142.478416
[2025-10-11 23:16:01] 2025-10-12 03:15:24,909 | INFO     | intersect: -5054823142.478416
[2025-10-11 23:16:01] 2025-10-12 03:15:24,930 | INFO     | chi2: 9.238430780084675
[2025-10-11 23:16:01] 2025-10-12 03:15:24,931 | INFO     | current chi2=9.238430780084675 (change=7.027557208109067 %)
[2025-10-11 23:16:01] 2025-10-12 03:15:24,931 | INFO     | right removable region: 1360
[2025-10-11 23:16:01] 2025-10-12 03:15:24,960 | INFO     | sum of square deviations: 781719019630.4175
[2025-10-11 23:16:01] 2025-10-12 03:15:25,259 | INFO     | sum of deviations: 1806541515874.489
[2025-10-11 23:16:01] 2025-10-12 03:15:25,260 | INFO     | mean x: 1760197399.3622336
[2025-10-11 23:16:01] 2025-10-12 03:15:25,260 | INFO     | mean y: 2148383.9706098456
[2025-10-11 23:16:01] 2025-10-12 03:15:25,260 | INFO     | -- intersect: -4065642725.404684
[2025-10-11 23:16:01] 2025-10-12 03:15:25,260 | INFO     | intersect: -4065642725.404684
[2025-10-11 23:16:01] 2025-10-12 03:15:25,262 | INFO     | chi2: 6.505766309986886
[2025-10-11 23:16:01] 2025-10-12 03:15:25,262 | INFO     | current chi2=6.505766309986886 (change=34.528168206167656 %)
[2025-10-11 23:16:01] 2025-10-12 03:15:25,273 | INFO     | sum of square deviations: 773134958658.4867
[2025-10-11 23:16:01] 2025-10-12 03:15:25,408 | INFO     | sum of deviations: 1543697186053.3474
[2025-10-11 23:16:01] 2025-10-12 03:15:25,409 | INFO     | mean x: 1760197551.8628318
[2025-10-11 23:16:01] 2025-10-12 03:15:25,409 | INFO     | mean y: 2153052.695427729
[2025-10-11 23:16:01] 2025-10-12 03:15:25,409 | INFO     | -- intersect: -3512384709.7974796
[2025-10-11 23:16:01] 2025-10-12 03:15:25,409 | INFO     | intersect: -3512384709.7974796
[2025-10-11 23:16:01] 2025-10-12 03:15:25,411 | INFO     | chi2: 4.8016400965300665
[2025-10-11 23:16:01] 2025-10-12 03:15:25,411 | INFO     | current chi2=4.8016400965300665 (change=26.19408893985088 %)
[2025-10-11 23:16:01] 2025-10-12 03:15:25,413 | INFO     | sum of square deviations: 764613968514.5543
[2025-10-11 23:16:01] 2025-10-12 03:15:25,672 | INFO     | sum of deviations: 1357923737317.0486
[2025-10-11 23:16:01] 2025-10-12 03:15:25,672 | INFO     | mean x: 1760197704.3634346
[2025-10-11 23:16:01] 2025-10-12 03:15:25,673 | INFO     | mean y: 2156377.515173945
[2025-10-11 23:16:01] 2025-10-12 03:15:25,705 | INFO     | -- intersect: -3123884139.07341
[2025-10-11 23:16:01] 2025-10-12 03:15:25,705 | INFO     | intersect: -3123884139.07341
[2025-10-11 23:16:01] 2025-10-12 03:15:25,707 | INFO     | chi2: 3.9952218147432967
[2025-10-11 23:16:01] 2025-10-12 03:15:25,708 | INFO     | current chi2=3.9952218147432967 (change=16.794642363336077 %)
[2025-10-11 23:16:01] 2025-10-12 03:15:25,708 | INFO     | left removable region: 30
[2025-10-11 23:16:01] 2025-10-12 03:15:25,767 | INFO     | sum of square deviations: 729509476197.0945
[2025-10-11 23:16:01] 2025-10-12 03:15:26,044 | INFO     | sum of deviations: 1034340331888.5275
[2025-10-11 23:16:01] 2025-10-12 03:15:26,045 | INFO     | mean x: 1760197978.863158
[2025-10-11 23:16:01] 2025-10-12 03:15:26,045 | INFO     | mean y: 2165010.612781955
[2025-10-11 23:16:01] 2025-10-12 03:15:26,045 | INFO     | -- intersect: -2493544532.6515245
[2025-10-11 23:16:01] 2025-10-12 03:15:26,045 | INFO     | intersect: -2493544532.6515245
[2025-10-11 23:16:01] 2025-10-12 03:15:26,047 | INFO     | chi2: 1.9729140721876255
[2025-10-11 23:16:01] 2025-10-12 03:15:26,047 | INFO     | -- intersect: -2493544532.6515245
[2025-10-11 23:16:01] 2025-10-12 03:15:26,047 | INFO     | current memory leak: 1.42 B/s (using 1330 data points, chi2=1.97)
[2025-10-11 23:16:01] 2025-10-12 03:15:26,049 | INFO     | could have reported an average CPU frequency of 2600 MHz (48 samples)
[2025-10-11 23:16:01] 2025-10-12 03:15:26,053 | INFO     | ..............................
[2025-10-11 23:16:01] 2025-10-12 03:15:26,053 | INFO     | . Timing measurements:
[2025-10-11 23:16:01] 2025-10-12 03:15:26,053 | INFO     | . get job = 0 s
[2025-10-11 23:16:01] 2025-10-12 03:15:26,053 | INFO     | . initial setup = 7 s
[2025-10-11 23:16:01] 2025-10-12 03:15:26,053 | INFO     | . payload setup = 52 s
[2025-10-11 23:16:01] 2025-10-12 03:15:26,053 | INFO     | . stage-in = 0 s
[2025-10-11 23:16:01] 2025-10-12 03:15:26,054 | INFO     | . payload execution = 83328 s
[2025-10-11 23:16:01] 2025-10-12 03:15:26,054 | INFO     | . stage-out = 5 s
[2025-10-11 23:16:01] 2025-10-12 03:15:26,054 | INFO     | . log creation = 1 s
[2025-10-11 23:16:01] 2025-10-12 03:15:26,054 | INFO     | ..............................
[2025-10-11 23:16:01] 2025-10-12 03:15:26,491 | INFO     | 
[2025-10-11 23:16:01] 2025-10-12 03:15:26,491 | INFO     | job summary report
[2025-10-11 23:16:01] 2025-10-12 03:15:26,491 | INFO     | --------------------------------------------------
[2025-10-11 23:16:01] 2025-10-12 03:15:26,491 | INFO     | PanDA job id: 6837932136
[2025-10-11 23:16:01] 2025-10-12 03:15:26,491 | INFO     | task id: 46676269
[2025-10-11 23:16:01] 2025-10-12 03:15:26,491 | INFO     | errors: (none)
[2025-10-11 23:16:01] 2025-10-12 03:15:26,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 23:16:01] 2025-10-12 03:15:26,491 | INFO     | pilot state: finished 
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | transexitcode: 0
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | exeerrorcode: 0
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | exeerrordiag: 
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | exitcode: 0
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | exitmsg: OK
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | cpuconsumptiontime: 52373 s
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | nevents: 400
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | neventsw: 0
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | pid: 755583
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | pgrp: 755583
[2025-10-11 23:16:01] 2025-10-12 03:15:26,492 | INFO     | corecount: 9
[2025-10-11 23:16:01] 2025-10-12 03:15:26,493 | INFO     | event service: False
[2025-10-11 23:16:01] 2025-10-12 03:15:26,493 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348714, 4: 2348941, 5: 2348941, 16: 2348997, 27: 2349153, 39: 2349471, 50: 2349471, 83385: 2408220, 83391: 2417218, 83393: 2417
[2025-10-11 23:16:01] 2025-10-12 03:15:26,493 | INFO     | --------------------------------------------------
[2025-10-11 23:16:01] 2025-10-12 03:15:26,493 | INFO     | 
[2025-10-11 23:16:01] 2025-10-12 03:15:26,493 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 23:16:01] 2025-10-12 03:15:26,583 | INFO     | time since job start (83504s) is within the limit (172800.0s)
[2025-10-11 23:16:01] 2025-10-12 03:15:26,729 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,729 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,730 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,730 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,730 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,731 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 23:16:01] 2025-10-12 03:15:26,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,731 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 23:16:01] 2025-10-12 03:15:26,732 | INFO     | job 6837932136 has completed (purged errors)
[2025-10-11 23:16:01] 2025-10-12 03:15:26,732 | INFO     | overall cleanup function is called
[2025-10-11 23:16:01] 2025-10-12 03:15:27,774 | INFO     | --- collectZombieJob: --- 10, [755583]
[2025-10-11 23:16:01] 2025-10-12 03:15:27,780 | INFO     | zombie collector waiting for pid 755583
[2025-10-11 23:16:01] 2025-10-12 03:15:27,780 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 23:16:01] 2025-10-12 03:15:27,780 | INFO     | collected zombie processes
[2025-10-11 23:16:01] 2025-10-12 03:15:27,780 | INFO     | will attempt to kill all subprocesses of pid=755583
[2025-10-11 23:16:01] 2025-10-12 03:15:28,644 | INFO     | process IDs to be killed: [755583] (in reverse order)
[2025-10-11 23:16:01] 2025-10-12 03:15:28,824 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 23:16:01] 2025-10-12 03:15:28,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 23:16:01] 2025-10-12 03:15:28,841 | INFO     | did not find any defunct processes belonging to 755583
[2025-10-11 23:16:01] 2025-10-12 03:15:28,857 | INFO     | did not find any defunct processes belonging to 755583
[2025-10-11 23:16:01] 2025-10-12 03:15:28,857 | INFO     | ready for new job
[2025-10-11 23:16:01] 2025-10-12 03:15:28,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 23:16:01] 2025-10-12 03:15:28,862 | INFO     | ***************************************
[2025-10-11 23:16:01] 2025-10-12 03:15:28,862 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 23:16:01] 2025-10-12 03:15:28,862 | INFO     | ***************************************
[2025-10-11 23:16:01] 2025-10-12 03:15:28,862 | INFO     | 
[2025-10-11 23:16:01] 2025-10-12 03:15:28,878 | INFO     | architecture information:
[2025-10-11 23:16:01] 2025-10-12 03:15:28,883 | INFO     | executing command: cat /etc/os-release
[2025-10-11 23:16:01] 2025-10-12 03:15:28,935 | INFO     | cat /etc/os-release:
[2025-10-11 23:16:01] NAME="CentOS Linux"
[2025-10-11 23:16:01] VERSION="7 (Core)"
[2025-10-11 23:16:01] ID="centos"
[2025-10-11 23:16:01] ID_LIKE="rhel fedora"
[2025-10-11 23:16:01] VERSION_ID="7"
[2025-10-11 23:16:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 23:16:01] ANSI_COLOR="0;31"
[2025-10-11 23:16:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 23:16:01] HOME_URL="https://www.centos.org/"
[2025-10-11 23:16:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 23:16:01] 
[2025-10-11 23:16:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 23:16:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 23:16:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 23:16:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 23:16:01] 
[2025-10-11 23:16:01] 2025-10-12 03:15:28,936 | INFO     | ***************************************
[2025-10-11 23:16:01] 2025-10-12 03:15:29,439 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 23:16:01] 2025-10-12 03:15:29,488 | INFO     | sufficient remaining disk space (75642175488 B)
[2025-10-11 23:16:01] 2025-10-12 03:15:29,489 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 23:16:01] 2025-10-12 03:15:29,489 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 23:16:01] 2025-10-12 03:15:29,489 | INFO     | update_server=False
[2025-10-11 23:16:01] 2025-10-12 03:15:29,489 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 23:16:01] 2025-10-12 03:15:29,489 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 23:16:01] 2025-10-12 03:15:29,490 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 23:16:01] 2025-10-12 03:15:29,802 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 23:16:01] 2025-10-12 03:15:29,802 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 23:16:01] 2025-10-12 03:15:29,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:16:01] 2025-10-12 03:15:29,803 | INFO     | will abort loop
[2025-10-11 23:16:01] 2025-10-12 03:15:29,827 | INFO     | all data control threads have been joined
[2025-10-11 23:16:01] 2025-10-12 03:15:30,032 | INFO     | all payload control threads have been joined
[2025-10-11 23:16:01] 2025-10-12 03:15:30,500 | INFO     | [job] retrieve thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:30,808 | INFO     | [job] job monitor thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:30,833 | INFO     | [data] control thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:30,905 | INFO     | all job control threads have been joined
[2025-10-11 23:16:01] 2025-10-12 03:15:30,909 | INFO     | [payload] validate_post thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:30,919 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:31,038 | INFO     | [payload] control thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:31,482 | INFO     | [job] validate thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:31,482 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:31,491 | INFO     | [data] copytool_in thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:31,492 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:31,492 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:31,496 | INFO     | [data] copytool_out thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:31,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 23:16:01] 2025-10-12 03:15:31,879 | INFO     | [payload] failed_post thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:31,911 | INFO     | [job] control thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:32,534 | INFO     | [job] queue monitor thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:33,529 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 23:16:01] 2025-10-12 03:15:51,135 | INFO     | [monitor] cgroup control has ended
[2025-10-11 23:16:01] 2025-10-12 03:15:52,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173332404032)>', '<ExcThread(monitor, started 140172523972352)>']
[2025-10-11 23:16:01] 2025-10-12 03:15:57,650 | INFO     | all workflow threads have been joined
[2025-10-11 23:16:01] 2025-10-12 03:15:57,650 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 23:16:01] 2025-10-12 03:15:57,651 | INFO     | traces error code: 0
[2025-10-11 23:16:01] 2025-10-12 03:15:57,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 23:16:01] 2025-10-12 03:16:00,324 | INFO     | PID=729324 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 23:16:01] 2025-10-12 03:16:00,325 | INFO     | .. there are 40 such processes running
[2025-10-11 23:16:01] 2025-10-12 03:16:00,325 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 23:16:01] 2025-10-12 03:16:00,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 23:16:01] 2025-10-12 03:16:00,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 23:16:01] 2025-10-12 03:16:00,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 23:16:01] 2025-10-12 03:16:00,326 | INFO     | [monitor] control thread has ended
[2025-10-11 23:16:01] 2025-10-12 03:16:00,488 [wrapper] ==== pilot stdout END ====
[2025-10-11 23:16:01] 2025-10-12 03:16:00,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 23:16:01] 2025-10-12 03:16:00,557 [wrapper] pilotpid: 729324
[2025-10-11 23:16:01] 2025-10-12 03:16:00,561 [wrapper] Pilot exit status: 0
[2025-10-11 23:16:01] 2025-10-12 03:16:00,721 [wrapper] pandaids: 6837932136
[2025-10-11 23:16:01] 2025-10-12 03:16:01,220 [wrapper] cleanup supervisor_pilot  669808 729325
[2025-10-11 23:16:01] 2025-10-12 03:16:01,250 [wrapper] Test setup, not cleaning
[2025-10-11 23:16:01] 2025-10-12 03:16:01,266 [wrapper] apfmon messages muted
[2025-10-11 23:16:01] 2025-10-12 03:16:01,286 [wrapper] ==== wrapper stdout END ====
[2025-10-11 23:16:01] 2025-10-12 03:16:01,305 [wrapper] ==== wrapper stderr END ====
[2025-10-11 23:16:01]  *** Error codes and diagnostics ***
[2025-10-11 23:16:01]     "exeErrorCode": 0,
[2025-10-11 23:16:01]     "exeErrorDiag": "",
[2025-10-11 23:16:01]     "pilotErrorCode": 0,
[2025-10-11 23:16:01]     "pilotErrorDiag": "",
[2025-10-11 23:16:01]  *** Listing of results directory ***
[2025-10-11 23:16:01] total 429892
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-11 23:16:01] -rwx------. 1 boincer umatlas     36292 Oct 10 21:52 runpilot2-wrapper.sh
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:52 queuedata.json
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 23:16:01] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:02 run_atlas
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:02 job.xml
[2025-10-11 23:16:01] -rw-r--r--. 2 boincer umatlas 223050875 Oct 11 00:02 EVNT.46676267._001965.pool.root.1
[2025-10-11 23:16:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 23:16:01] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:02 shared
[2025-10-11 23:16:01] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 00:02 input.tar.gz
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:02 boinc_lockfile
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:02 pandaJob.out
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas    975509 Oct 11 00:03 agis_schedconf.cvmfs.json
[2025-10-11 23:16:01] drwx------. 5 boincer umatlas      4096 Oct 11 00:03 pilot3
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas      6658 Oct 11 23:12 init_data.xml
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas 194839520 Oct 11 23:13 HITS.46676269._048718.pool.root.1
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas       531 Oct 11 23:13 boinc_task_state.xml
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas      1064 Oct 11 23:14 memory_monitor_summary.json
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas   1560580 Oct 11 23:14 agis_ddmendpoints.agis.ALL.json
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas   1180065 Oct 11 23:14 log.46676269._048718.job.log.tgz.1
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas      7846 Oct 11 23:15 heartbeat.json
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 23:15 boinc_mmap_file
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas        28 Oct 11 23:15 wrapper_checkpoint.txt
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas        95 Oct 11 23:16 pilot_heartbeat.json
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas       822 Oct 11 23:16 pilotlog.txt
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas   8030698 Oct 11 23:16 log.46676269._048718.job.log.1
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas       357 Oct 11 23:16 output.list
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas       620 Oct 11 23:16 runtime_log
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas   9226240 Oct 11 23:16 result.tar.gz
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas      8694 Oct 11 23:16 runtime_log.err
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas       658 Oct 11 23:16 JtrNDmYxdR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJ3eNDmk197mm.diag
[2025-10-11 23:16:01] -rw-r--r--. 1 boincer umatlas     21135 Oct 11 23:16 stderr.txt
[2025-10-11 23:16:01] HITS file was successfully produced:
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas 194839520 Oct 11 23:13 shared/HITS.pool.root.1
[2025-10-11 23:16:01]  *** Contents of shared directory: ***
[2025-10-11 23:16:01] total 417692
[2025-10-11 23:16:01] -rw-r--r--. 2 boincer umatlas 223050875 Oct 11 00:02 ATLAS.root_0
[2025-10-11 23:16:01] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 23:16:01] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 00:02 input.tar.gz
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas 194839520 Oct 11 23:13 HITS.pool.root.1
[2025-10-11 23:16:01] -rw-------. 1 boincer umatlas   9226240 Oct 11 23:16 result.tar.gz
23:16:03 (720092): run_atlas exited; CPU time 55535.196581
23:16:03 (720092): called boinc_finish(0)

</stderr_txt>
]]>

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