Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:37:56 (3681282): wrapper (7.7.26015): starting
13:37:56 (3681282): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 13:37:56] Arguments: --nthreads 8
[2025-10-11 13:37:56] Threads: 8
[2025-10-11 13:37:56] Checking for CVMFS
[2025-10-11 13:37:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 13:37:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 13:37:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 13:37:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 13:37:56] 2.13.2.0 2356181 128132 255772 151591 2 107 23103927 32935936 26535 16776704 0 119372279 99.724 90871111 30479 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 13:37:56] CVMFS is ok
[2025-10-11 13:37:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 13:37:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 13:37:56] Further information can be found at the LHC@home message board.
[2025-10-11 13:37:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 13:37:56] Checking for apptainer binary...
[2025-10-11 13:37:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 13:37:56] Running /usr/bin/apptainer --version
[2025-10-11 13:37:56] apptainer version 1.4.3-1.el9
[2025-10-11 13:37:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 13:37:57] c-6-2.aglt2.org
[2025-10-11 13:37:57] apptainer works
[2025-10-11 13:37:57] Set ATHENA_PROC_NUMBER=8
[2025-10-11 13:37:57] Set ATHENA_CORE_NUMBER=8
[2025-10-11 13:37:57] Starting ATLAS job with PandaID=6837932167
[2025-10-11 13:37:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:02:09]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:02:09] 2025-10-12 00:01:18,299 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:02:09] 2025-10-12 00:01:18,384 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:02:09] 2025-10-12 00:01:18,384 | INFO     | sum of square deviations: 16482502952.593136
[2025-10-11 20:02:09] 2025-10-12 00:01:18,392 | INFO     | sum of deviations: -11826340981.59045
[2025-10-11 20:02:09] 2025-10-12 00:01:18,393 | INFO     | mean x: 1760215772.56117
[2025-10-11 20:02:09] 2025-10-12 00:01:18,393 | INFO     | mean y: 2127938.0691489363
[2025-10-11 20:02:09] 2025-10-12 00:01:18,393 | INFO     | -- intersect: 1265098251.9441426
[2025-10-11 20:02:09] 2025-10-12 00:01:18,393 | INFO     | intersect: 1265098251.9441426
[2025-10-11 20:02:09] 2025-10-12 00:01:18,394 | INFO     | chi2: 3.4952208204504616
[2025-10-11 20:02:09] 2025-10-12 00:01:18,394 | INFO     | sum of square deviations: 15833711158.177937
[2025-10-11 20:02:09] 2025-10-12 00:01:18,402 | INFO     | sum of deviations: 33423841232.7547
[2025-10-11 20:02:09] 2025-10-12 00:01:18,402 | INFO     | mean x: 1760215620.0700808
[2025-10-11 20:02:09] 2025-10-12 00:01:18,402 | INFO     | mean y: 2138508.5094339624
[2025-10-11 20:02:09] 2025-10-12 00:01:18,403 | INFO     | -- intersect: -3713551820.36527
[2025-10-11 20:02:09] 2025-10-12 00:01:18,403 | INFO     | intersect: -3713551820.36527
[2025-10-11 20:02:09] 2025-10-12 00:01:18,408 | INFO     | chi2: 2.144005650157059
[2025-10-11 20:02:09] 2025-10-12 00:01:18,408 | INFO     | current chi2=2.144005650157059 (change=38.65893572124176 %)
[2025-10-11 20:02:09] 2025-10-12 00:01:18,408 | INFO     | sum of square deviations: 15202107245.65305
[2025-10-11 20:02:09] 2025-10-12 00:01:18,416 | INFO     | sum of deviations: 46250164883.83055
[2025-10-11 20:02:09] 2025-10-12 00:01:18,416 | INFO     | mean x: 1760215467.5710382
[2025-10-11 20:02:09] 2025-10-12 00:01:18,417 | INFO     | mean y: 2141605.8142076503
[2025-10-11 20:02:09] 2025-10-12 00:01:18,417 | INFO     | -- intersect: -5353053847.731101
[2025-10-11 20:02:09] 2025-10-12 00:01:18,417 | INFO     | intersect: -5353053847.731101
[2025-10-11 20:02:09] 2025-10-12 00:01:18,417 | INFO     | chi2: 2.0690766775006786
[2025-10-11 20:02:09] 2025-10-12 00:01:18,418 | INFO     | current chi2=2.0690766775006786 (change=3.4948122758394455 %)
[2025-10-11 20:02:09] 2025-10-12 00:01:18,418 | INFO     | right removable region: 365
[2025-10-11 20:02:09] 2025-10-12 00:01:18,418 | INFO     | sum of square deviations: 15833513271.88682
[2025-10-11 20:02:09] 2025-10-12 00:01:18,426 | INFO     | sum of deviations: -76232442452.18869
[2025-10-11 20:02:09] 2025-10-12 00:01:18,426 | INFO     | mean x: 1760215925.0754716
[2025-10-11 20:02:09] 2025-10-12 00:01:18,426 | INFO     | mean y: 2143026.935309973
[2025-10-11 20:02:09] 2025-10-12 00:01:18,427 | INFO     | -- intersect: 8476924138.843999
[2025-10-11 20:02:09] 2025-10-12 00:01:18,427 | INFO     | intersect: 8476924138.843999
[2025-10-11 20:02:09] 2025-10-12 00:01:18,430 | INFO     | chi2: 1.7507535263497702
[2025-10-11 20:02:09] 2025-10-12 00:01:18,431 | INFO     | current chi2=1.7507535263497702 (change=49.91007388986272 %)
[2025-10-11 20:02:09] 2025-10-12 00:01:18,431 | INFO     | sum of square deviations: 15201824626.874315
[2025-10-11 20:02:09] 2025-10-12 00:01:18,439 | INFO     | sum of deviations: -82265632644.85793
[2025-10-11 20:02:09] 2025-10-12 00:01:18,444 | INFO     | mean x: 1760216077.5846994
[2025-10-11 20:02:09] 2025-10-12 00:01:18,444 | INFO     | mean y: 2144464.3825136614
[2025-10-11 20:02:09] 2025-10-12 00:01:18,444 | INFO     | -- intersect: 9527664773.185694
[2025-10-11 20:02:09] 2025-10-12 00:01:18,444 | INFO     | intersect: 9527664773.185694
[2025-10-11 20:02:09] 2025-10-12 00:01:18,445 | INFO     | chi2: 1.686726842264174
[2025-10-11 20:02:09] 2025-10-12 00:01:18,445 | INFO     | current chi2=1.686726842264174 (change=3.657092967225867 %)
[2025-10-11 20:02:09] 2025-10-12 00:01:18,445 | INFO     | left removable region: 20
[2025-10-11 20:02:09] 2025-10-12 00:01:18,445 | INFO     | sum of square deviations: 12732333889.843523
[2025-10-11 20:02:09] 2025-10-12 00:01:18,453 | INFO     | sum of deviations: -6591935267.869562
[2025-10-11 20:02:09] 2025-10-12 00:01:18,453 | INFO     | mean x: 1760216047.095652
[2025-10-11 20:02:09] 2025-10-12 00:01:18,453 | INFO     | mean y: 2155547.086956522
[2025-10-11 20:02:09] 2025-10-12 00:01:18,454 | INFO     | -- intersect: 913475525.0507436
[2025-10-11 20:02:09] 2025-10-12 00:01:18,455 | INFO     | intersect: 913475525.0507436
[2025-10-11 20:02:09] 2025-10-12 00:01:18,455 | INFO     | chi2: 0.2013460943184001
[2025-10-11 20:02:09] 2025-10-12 00:01:18,455 | INFO     | -- intersect: 913475525.0507436
[2025-10-11 20:02:09] 2025-10-12 00:01:18,455 | INFO     | current memory leak: -0.52 B/s (using 345 data points, chi2=0.20)
[2025-10-11 20:02:09] 2025-10-12 00:01:18,456 | INFO     | could have reported an average CPU frequency of 2602 MHz (16 samples)
[2025-10-11 20:02:09] 2025-10-12 00:01:18,459 | INFO     | ..............................
[2025-10-11 20:02:09] 2025-10-12 00:01:18,460 | INFO     | . Timing measurements:
[2025-10-11 20:02:09] 2025-10-12 00:01:18,460 | INFO     | . get job = 0 s
[2025-10-11 20:02:09] 2025-10-12 00:01:18,460 | INFO     | . initial setup = 3 s
[2025-10-11 20:02:09] 2025-10-12 00:01:18,460 | INFO     | . payload setup = 9 s
[2025-10-11 20:02:09] 2025-10-12 00:01:18,460 | INFO     | . stage-in = 0 s
[2025-10-11 20:02:09] 2025-10-12 00:01:18,460 | INFO     | . payload execution = 22901 s
[2025-10-11 20:02:09] 2025-10-12 00:01:18,460 | INFO     | . stage-out = 5 s
[2025-10-11 20:02:09] 2025-10-12 00:01:18,460 | INFO     | . log creation = 0 s
[2025-10-11 20:02:09] 2025-10-12 00:01:18,460 | INFO     | ..............................
[2025-10-11 20:02:09] 2025-10-12 00:01:18,812 | INFO     | 
[2025-10-11 20:02:09] 2025-10-12 00:01:18,813 | INFO     | job summary report
[2025-10-11 20:02:09] 2025-10-12 00:01:18,813 | INFO     | --------------------------------------------------
[2025-10-11 20:02:09] 2025-10-12 00:01:18,813 | INFO     | PanDA job id: 6837932167
[2025-10-11 20:02:09] 2025-10-12 00:01:18,813 | INFO     | task id: 46676269
[2025-10-11 20:02:09] 2025-10-12 00:01:18,813 | INFO     | errors: (none)
[2025-10-11 20:02:09] 2025-10-12 00:01:18,813 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:02:09] 2025-10-12 00:01:18,813 | INFO     | pilot state: finished 
[2025-10-11 20:02:09] 2025-10-12 00:01:18,813 | INFO     | transexitcode: 0
[2025-10-11 20:02:09] 2025-10-12 00:01:18,813 | INFO     | exeerrorcode: 0
[2025-10-11 20:02:09] 2025-10-12 00:01:18,814 | INFO     | exeerrordiag: 
[2025-10-11 20:02:09] 2025-10-12 00:01:18,814 | INFO     | exitcode: 0
[2025-10-11 20:02:09] 2025-10-12 00:01:18,814 | INFO     | exitmsg: OK
[2025-10-11 20:02:09] 2025-10-12 00:01:18,814 | INFO     | cpuconsumptiontime: 51923 s
[2025-10-11 20:02:09] 2025-10-12 00:01:18,814 | INFO     | nevents: 400
[2025-10-11 20:02:09] 2025-10-12 00:01:18,814 | INFO     | neventsw: 0
[2025-10-11 20:02:09] 2025-10-12 00:01:18,814 | INFO     | pid: 3692096
[2025-10-11 20:02:09] 2025-10-12 00:01:18,814 | INFO     | pgrp: 3692096
[2025-10-11 20:02:09] 2025-10-12 00:01:18,814 | INFO     | corecount: 8
[2025-10-11 20:02:09] 2025-10-12 00:01:18,814 | INFO     | event service: False
[2025-10-11 20:02:09] 2025-10-12 00:01:18,815 | INFO     | sizes: {0: 2348686, 1: 2348885, 8: 2349147, 12: 2349175, 22916: 2383636, 22923: 2392634, 22927: 2392818, 22965: 2393012}
[2025-10-11 20:02:09] 2025-10-12 00:01:18,815 | INFO     | --------------------------------------------------
[2025-10-11 20:02:09] 2025-10-12 00:01:18,815 | INFO     | 
[2025-10-11 20:02:09] 2025-10-12 00:01:18,815 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 20:02:09] 2025-10-12 00:01:18,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,906 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:02:09] 2025-10-12 00:01:18,906 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,906 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:02:09] 2025-10-12 00:01:18,906 | INFO     | job 6837932167 has completed (purged errors)
[2025-10-11 20:02:09] 2025-10-12 00:01:18,907 | INFO     | overall cleanup function is called
[2025-10-11 20:02:09] 2025-10-12 00:01:19,941 | INFO     | --- collectZombieJob: --- 10, [3692096]
[2025-10-11 20:02:09] 2025-10-12 00:01:19,942 | INFO     | zombie collector waiting for pid 3692096
[2025-10-11 20:02:09] 2025-10-12 00:01:19,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:02:09] 2025-10-12 00:01:19,942 | INFO     | collected zombie processes
[2025-10-11 20:02:09] 2025-10-12 00:01:19,942 | INFO     | will attempt to kill all subprocesses of pid=3692096
[2025-10-11 20:02:09] 2025-10-12 00:01:22,545 | INFO     | process IDs to be killed: [3692096] (in reverse order)
[2025-10-11 20:02:09] 2025-10-12 00:01:22,827 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:02:09] 2025-10-12 00:01:22,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:02:09] 2025-10-12 00:01:22,864 | INFO     | did not find any defunct processes belonging to 3692096
[2025-10-11 20:02:09] 2025-10-12 00:01:22,903 | INFO     | did not find any defunct processes belonging to 3692096
[2025-10-11 20:02:09] 2025-10-12 00:01:22,903 | INFO     | ready for new job
[2025-10-11 20:02:09] 2025-10-12 00:01:22,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:02:09] 2025-10-12 00:01:22,906 | INFO     | ***************************************
[2025-10-11 20:02:09] 2025-10-12 00:01:22,907 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:02:09] 2025-10-12 00:01:22,907 | INFO     | ***************************************
[2025-10-11 20:02:09] 2025-10-12 00:01:22,907 | INFO     | 
[2025-10-11 20:02:09] 2025-10-12 00:01:22,921 | INFO     | architecture information:
[2025-10-11 20:02:09] 2025-10-12 00:01:22,925 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:02:09] 2025-10-12 00:01:23,104 | INFO     | cat /etc/os-release:
[2025-10-11 20:02:09] NAME="CentOS Linux"
[2025-10-11 20:02:09] VERSION="7 (Core)"
[2025-10-11 20:02:09] ID="centos"
[2025-10-11 20:02:09] ID_LIKE="rhel fedora"
[2025-10-11 20:02:09] VERSION_ID="7"
[2025-10-11 20:02:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:02:09] ANSI_COLOR="0;31"
[2025-10-11 20:02:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:02:09] HOME_URL="https://www.centos.org/"
[2025-10-11 20:02:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:02:09] 
[2025-10-11 20:02:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:02:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:02:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:02:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:02:09] 
[2025-10-11 20:02:09] 2025-10-12 00:01:23,104 | INFO     | ***************************************
[2025-10-11 20:02:09] 2025-10-12 00:01:23,618 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 20:02:09] 2025-10-12 00:01:23,747 | INFO     | sufficient remaining disk space (75706138624 B)
[2025-10-11 20:02:09] 2025-10-12 00:01:23,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:02:09] 2025-10-12 00:01:23,748 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:02:09] 2025-10-12 00:01:23,748 | INFO     | update_server=False
[2025-10-11 20:02:09] 2025-10-12 00:01:23,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:02:09] 2025-10-12 00:01:23,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:02:09] 2025-10-12 00:01:23,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:02:09] 2025-10-12 00:01:23,882 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 20:02:09] 2025-10-12 00:01:23,890 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 20:02:09] 2025-10-12 00:01:23,890 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:02:09] 2025-10-12 00:01:23,890 | INFO     | will abort loop
[2025-10-11 20:02:09] 2025-10-12 00:01:23,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:02:09] 2025-10-12 00:01:24,447 | INFO     | all data control threads have been joined
[2025-10-11 20:02:09] 2025-10-12 00:01:24,754 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:24,797 | INFO     | all job control threads have been joined
[2025-10-11 20:02:09] 2025-10-12 00:01:24,897 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:24,903 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:24,914 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:25,275 | INFO     | all payload control threads have been joined
[2025-10-11 20:02:09] 2025-10-12 00:01:25,411 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:25,453 | INFO     | [data] control thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:25,534 | INFO     | [job] validate thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:25,601 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:25,723 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:25,724 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:25,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:25,770 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:25,803 | INFO     | [job] control thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:26,124 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:26,280 | INFO     | [payload] control thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:27,785 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:02:09] 2025-10-12 00:01:53,435 | INFO     | PID=3685515 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:02:09] 2025-10-12 00:01:53,436 | INFO     | .. there are 41 such processes running
[2025-10-11 20:02:09] 2025-10-12 00:01:53,437 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:02:09] 2025-10-12 00:01:53,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:02:09] 2025-10-12 00:01:53,438 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:02:09] 2025-10-12 00:02:01,395 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:02:09] 2025-10-12 00:02:03,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140532047021888)>', '<ExcThread(monitor, started 140531329922816)>']
[2025-10-11 20:02:09] 2025-10-12 00:02:03,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:02:09] 2025-10-12 00:02:03,549 | INFO     | [monitor] control thread has ended
[2025-10-11 20:02:09] 2025-10-12 00:02:08,463 | INFO     | all workflow threads have been joined
[2025-10-11 20:02:09] 2025-10-12 00:02:08,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:02:09] 2025-10-12 00:02:08,468 | INFO     | traces error code: 0
[2025-10-11 20:02:09] 2025-10-12 00:02:08,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:02:09] 2025-10-12 00:02:09,039 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:02:09] 2025-10-12 00:02:09,043 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:02:09] 2025-10-12 00:02:09,045 [wrapper] pilotpid: 3685515
[2025-10-11 20:02:09] 2025-10-12 00:02:09,047 [wrapper] Pilot exit status: 0
[2025-10-11 20:02:09] 2025-10-12 00:02:09,092 [wrapper] pandaids: 6837932167
[2025-10-11 20:02:09] 2025-10-12 00:02:09,210 [wrapper] cleanup supervisor_pilot  633362 3685516
[2025-10-11 20:02:09] 2025-10-12 00:02:09,235 [wrapper] Test setup, not cleaning
[2025-10-11 20:02:09] 2025-10-12 00:02:09,274 [wrapper] apfmon messages muted
[2025-10-11 20:02:09] 2025-10-12 00:02:09,295 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:02:09] 2025-10-12 00:02:09,316 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:02:09]  *** Error codes and diagnostics ***
[2025-10-11 20:02:09]     "exeErrorCode": 0,
[2025-10-11 20:02:09]     "exeErrorDiag": "",
[2025-10-11 20:02:09]     "pilotErrorCode": 0,
[2025-10-11 20:02:09]     "pilotErrorDiag": "",
[2025-10-11 20:02:09]  *** Listing of results directory ***
[2025-10-11 20:02:09] total 419588
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-11 20:02:09] -rwx------. 1 boincer umatlas     36292 Oct 10 21:52 runpilot2-wrapper.sh
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:52 queuedata.json
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas       100 Oct 11 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:02:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 13:37 run_atlas
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas       105 Oct 11 13:37 job.xml
[2025-10-11 20:02:09] -rw-r--r--. 2 boincer umatlas 221396739 Oct 11 13:37 EVNT.46676267._001966.pool.root.1
[2025-10-11 20:02:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:37 start_atlas.sh
[2025-10-11 20:02:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 13:37 shared
[2025-10-11 20:02:09] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 13:37 input.tar.gz
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas         0 Oct 11 13:37 boinc_lockfile
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 13:37 pandaJob.out
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas    975520 Oct 11 13:38 agis_schedconf.cvmfs.json
[2025-10-11 20:02:09] drwx------. 5 boincer umatlas      4096 Oct 11 13:38 pilot3
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas      6656 Oct 11 19:54 init_data.xml
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas 197971245 Oct 11 19:58 HITS.46676269._048749.pool.root.1
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas       531 Oct 11 19:58 boinc_task_state.xml
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas      1041 Oct 11 20:00 memory_monitor_summary.json
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas   1560580 Oct 11 20:00 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas    549000 Oct 11 20:00 log.46676269._048749.job.log.tgz.1
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas      7820 Oct 11 20:01 heartbeat.json
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas        95 Oct 11 20:01 pilot_heartbeat.json
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 20:01 boinc_mmap_file
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas        28 Oct 11 20:01 wrapper_checkpoint.txt
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas      5010 Oct 11 20:02 pilotlog.txt
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas   2644690 Oct 11 20:02 log.46676269._048749.job.log.1
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas       357 Oct 11 20:02 output.list
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas       620 Oct 11 20:02 runtime_log
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas   3215360 Oct 11 20:02 result.tar.gz
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas      8689 Oct 11 20:02 runtime_log.err
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas       654 Oct 11 20:02 IB3KDmZxdR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmn3eNDmQ8WYUo.diag
[2025-10-11 20:02:09] -rw-r--r--. 1 boincer umatlas     21002 Oct 11 20:02 stderr.txt
[2025-10-11 20:02:09] HITS file was successfully produced:
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas 197971245 Oct 11 19:58 shared/HITS.pool.root.1
[2025-10-11 20:02:09]  *** Contents of shared directory: ***
[2025-10-11 20:02:09] total 413260
[2025-10-11 20:02:09] -rw-r--r--. 2 boincer umatlas 221396739 Oct 11 13:37 ATLAS.root_0
[2025-10-11 20:02:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 13:37 start_atlas.sh
[2025-10-11 20:02:09] -rw-r--r--. 2 boincer umatlas    569677 Oct 11 13:37 input.tar.gz
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas 197971245 Oct 11 19:58 HITS.pool.root.1
[2025-10-11 20:02:09] -rw-------. 1 boincer umatlas   3215360 Oct 11 20:02 result.tar.gz
20:02:11 (3681282): run_atlas exited; CPU time 52803.930019
20:02:11 (3681282): called boinc_finish(0)

</stderr_txt>
]]>

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