Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:42 (1027494): wrapper (7.7.26015): starting
00:02:42 (1027494): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:02:42] Arguments: --nthreads 9
[2025-10-11 00:02:42] Threads: 9
[2025-10-11 00:02:42] Checking for CVMFS
[2025-10-11 00:02:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:02:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:02:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:02:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:02:47] 2.13.2.0 941838 136143 267056 151571 3 361 32428959 32935937 33790 16776704 0 89076907 99.704 71333679 29751 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:02:47] CVMFS is ok
[2025-10-11 00:02:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:02:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:02:47] Further information can be found at the LHC@home message board.
[2025-10-11 00:02:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:02:47] Checking for apptainer binary...
[2025-10-11 00:02:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:02:47] Running /usr/bin/apptainer --version
[2025-10-11 00:02:47] apptainer version 1.4.3-1.el9
[2025-10-11 00:02:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:02:49] c-6-7.aglt2.org
[2025-10-11 00:02:49] apptainer works
[2025-10-11 00:02:49] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:02:49] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:02:49] Starting ATLAS job with PandaID=6837732253
[2025-10-11 00:02:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 17:40:10]  *** The last 200 lines of the pilot log: ***
[2025-10-11 17:40:10] 2025-10-11 14:31:25,346 | INFO     | monitor loop #1667: job 0:6837732253 is in state 'finished'
[2025-10-11 17:40:10] 2025-10-11 14:31:25,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:40:10] 2025-10-11 14:31:27,924 | INFO     | monitor loop #1668: job 0:6837732253 is in state 'finished'
[2025-10-11 17:40:10] 2025-10-11 14:31:27,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:40:10] 2025-10-11 14:31:29,631 | INFO     | PID=1038970 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:40:10] 2025-10-11 14:31:29,631 | INFO     | .. there are 41 such processes running
[2025-10-11 17:40:10] 2025-10-11 14:31:30,447 | INFO     | monitor loop #1669: job 0:6837732253 is in state 'finished'
[2025-10-11 17:40:10] 2025-10-11 14:31:30,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 17:40:10] 2025-10-11 14:31:30,633 | INFO     | time since job start (37594s) is within the limit (172800.0s)
[2025-10-11 17:40:10] 2025-10-11 14:31:32,203 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 17:40:10] 2025-10-11 14:31:32,209 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.192274999999
[2025-10-11 17:40:10] 2025-10-11 14:31:32,217 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6837732253/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 17:40:10] 2025-10-11 14:31:32,218 | INFO     | extracted standard info from prmon json
[2025-10-11 17:40:10] 2025-10-11 14:31:32,218 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 17:40:10] 2025-10-11 14:31:32,218 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 17:40:10] 2025-10-11 14:31:32,219 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 17:40:10] 2025-10-11 14:31:32,219 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 17:40:10] 2025-10-11 14:31:32,234 | INFO     | fitting pss+swap vs Time
[2025-10-11 17:40:10] 2025-10-11 14:31:32,235 | INFO     | sum of square deviations: 71080416300.4706
[2025-10-11 17:40:10] 2025-10-11 14:31:32,250 | INFO     | sum of deviations: 577203322298.4707
[2025-10-11 17:40:10] 2025-10-11 14:31:32,250 | INFO     | mean x: 1760174391.1960785
[2025-10-11 17:40:10] 2025-10-11 14:31:32,250 | INFO     | mean y: 2083631.2794117648
[2025-10-11 17:40:10] 2025-10-11 14:31:32,250 | INFO     | -- intersect: -14291283786.946278
[2025-10-11 17:40:10] 2025-10-11 14:31:32,250 | INFO     | intersect: -14291283786.946278
[2025-10-11 17:40:10] 2025-10-11 14:31:32,251 | INFO     | chi2: 17.872982667844266
[2025-10-11 17:40:10] 2025-10-11 14:31:32,252 | INFO     | sum of square deviations: 69353166529.05342
[2025-10-11 17:40:10] 2025-10-11 14:31:32,268 | INFO     | sum of deviations: 742652266853.2151
[2025-10-11 17:40:10] 2025-10-11 14:31:32,270 | INFO     | mean x: 1760174238.7248764
[2025-10-11 17:40:10] 2025-10-11 14:31:32,270 | INFO     | mean y: 2098232.2108731465
[2025-10-11 17:40:10] 2025-10-11 14:31:32,270 | INFO     | -- intersect: -18846318557.78603
[2025-10-11 17:40:10] 2025-10-11 14:31:32,270 | INFO     | intersect: -18846318557.78603
[2025-10-11 17:40:10] 2025-10-11 14:31:32,271 | INFO     | chi2: 14.07894042853867
[2025-10-11 17:40:10] 2025-10-11 14:31:32,271 | INFO     | current chi2=14.07894042853867 (change=21.227806851351968 %)
[2025-10-11 17:40:10] 2025-10-11 14:31:32,271 | INFO     | right removable region: 606
[2025-10-11 17:40:10] 2025-10-11 14:31:32,272 | INFO     | sum of square deviations: 69351824156.6031
[2025-10-11 17:40:10] 2025-10-11 14:31:32,295 | INFO     | sum of deviations: 410629340282.9923
[2025-10-11 17:40:10] 2025-10-11 14:31:32,296 | INFO     | mean x: 1760174543.7265239
[2025-10-11 17:40:10] 2025-10-11 14:31:32,296 | INFO     | mean y: 2098321.981878089
[2025-10-11 17:40:10] 2025-10-11 14:31:32,296 | INFO     | -- intersect: -10419823818.685022
[2025-10-11 17:40:10] 2025-10-11 14:31:32,296 | INFO     | intersect: -10419823818.685022
[2025-10-11 17:40:10] 2025-10-11 14:31:32,297 | INFO     | chi2: 13.968900143378539
[2025-10-11 17:40:10] 2025-10-11 14:31:32,297 | INFO     | current chi2=13.968900143378539 (change=21.843486322457302 %)
[2025-10-11 17:40:10] 2025-10-11 14:31:32,297 | INFO     | left removable region: 10
[2025-10-11 17:40:10] 2025-10-11 14:31:32,298 | INFO     | sum of square deviations: 65649629887.201546
[2025-10-11 17:40:10] 2025-10-11 14:31:32,311 | INFO     | sum of deviations: 486516571824.158
[2025-10-11 17:40:10] 2025-10-11 14:31:32,312 | INFO     | mean x: 1760174513.2919464
[2025-10-11 17:40:10] 2025-10-11 14:31:32,312 | INFO     | mean y: 2127125.303691275
[2025-10-11 17:40:10] 2025-10-11 14:31:32,312 | INFO     | -- intersect: -13042182058.014349
[2025-10-11 17:40:10] 2025-10-11 14:31:32,312 | INFO     | intersect: -13042182058.014349
[2025-10-11 17:40:10] 2025-10-11 14:31:32,313 | INFO     | chi2: 7.485180267509647
[2025-10-11 17:40:10] 2025-10-11 14:31:32,313 | INFO     | -- intersect: -13042182058.014349
[2025-10-11 17:40:10] 2025-10-11 14:31:32,313 | INFO     | current memory leak: 7.41 B/s (using 596 data points, chi2=7.49)
[2025-10-11 17:40:10] 2025-10-11 14:31:32,314 | INFO     | could have reported an average CPU frequency of 2600 MHz (23 samples)
[2025-10-11 17:40:10] 2025-10-11 14:31:32,314 | INFO     | ..............................
[2025-10-11 17:40:10] 2025-10-11 14:31:32,315 | INFO     | . Timing measurements:
[2025-10-11 17:40:10] 2025-10-11 14:31:32,315 | INFO     | . get job = 1 s
[2025-10-11 17:40:10] 2025-10-11 14:31:32,315 | INFO     | . initial setup = 9 s
[2025-10-11 17:40:10] 2025-10-11 14:31:32,315 | INFO     | . payload setup = 55 s
[2025-10-11 17:40:10] 2025-10-11 14:31:32,315 | INFO     | . stage-in = 1 s
[2025-10-11 17:40:10] 2025-10-11 14:31:32,315 | INFO     | . payload execution = 37342 s
[2025-10-11 17:40:10] 2025-10-11 14:31:32,315 | INFO     | . stage-out = 7 s
[2025-10-11 17:40:10] 2025-10-11 14:31:32,315 | INFO     | . log creation = 1 s
[2025-10-11 17:40:10] 2025-10-11 14:31:32,315 | INFO     | ..............................
[2025-10-11 17:40:10] 2025-10-11 14:31:32,473 | INFO     | 
[2025-10-11 17:40:10] 2025-10-11 14:31:32,474 | INFO     | job summary report
[2025-10-11 17:40:10] 2025-10-11 14:31:32,474 | INFO     | --------------------------------------------------
[2025-10-11 17:40:10] 2025-10-11 14:31:32,474 | INFO     | PanDA job id: 6837732253
[2025-10-11 17:40:10] 2025-10-11 14:31:32,474 | INFO     | task id: 46676269
[2025-10-11 17:40:10] 2025-10-11 14:31:32,474 | INFO     | errors: (none)
[2025-10-11 17:40:10] 2025-10-11 14:31:32,474 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 17:40:10] 2025-10-11 14:31:32,474 | INFO     | pilot state: finished 
[2025-10-11 17:40:10] 2025-10-11 14:31:32,474 | INFO     | transexitcode: 0
[2025-10-11 17:40:10] 2025-10-11 14:31:32,475 | INFO     | exeerrorcode: 0
[2025-10-11 17:40:10] 2025-10-11 14:31:32,475 | INFO     | exeerrordiag: 
[2025-10-11 17:40:10] 2025-10-11 14:31:32,475 | INFO     | exitcode: 0
[2025-10-11 17:40:10] 2025-10-11 14:31:32,475 | INFO     | exitmsg: OK
[2025-10-11 17:40:10] 2025-10-11 14:31:32,475 | INFO     | cpuconsumptiontime: 50467 s
[2025-10-11 17:40:10] 2025-10-11 14:31:32,475 | INFO     | nevents: 400
[2025-10-11 17:40:10] 2025-10-11 14:31:32,475 | INFO     | neventsw: 0
[2025-10-11 17:40:10] 2025-10-11 14:31:32,475 | INFO     | pid: 1056147
[2025-10-11 17:40:10] 2025-10-11 14:31:32,475 | INFO     | pgrp: 1056147
[2025-10-11 17:40:10] 2025-10-11 14:31:32,476 | INFO     | corecount: 9
[2025-10-11 17:40:10] 2025-10-11 14:31:32,476 | INFO     | event service: False
[2025-10-11 17:40:10] 2025-10-11 14:31:32,476 | INFO     | sizes: {0: 2348028, 2: 2348629, 3: 2348713, 4: 2348741, 5: 2348769, 6: 2348996, 7: 2349152, 18: 2349180, 31: 2349208, 42: 2349236, 53: 2349292, 64: 2349862, 65: 23
[2025-10-11 17:40:10] 2025-10-11 14:31:32,476 | INFO     | --------------------------------------------------
[2025-10-11 17:40:10] 2025-10-11 14:31:32,476 | INFO     | 
[2025-10-11 17:40:10] 2025-10-11 14:31:32,476 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 17:40:10] 2025-10-11 14:31:32,516 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,517 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,517 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,517 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,517 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,517 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,517 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,517 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,517 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,518 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,518 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,518 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,518 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,518 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,518 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,518 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,518 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,518 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 17:40:10] 2025-10-11 14:31:32,518 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,519 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 17:40:10] 2025-10-11 14:31:32,519 | INFO     | job 6837732253 has completed (purged errors)
[2025-10-11 17:40:10] 2025-10-11 14:31:32,519 | INFO     | overall cleanup function is called
[2025-10-11 17:40:10] 2025-10-11 14:31:33,531 | INFO     | --- collectZombieJob: --- 10, [1056147]
[2025-10-11 17:40:10] 2025-10-11 14:31:33,531 | INFO     | zombie collector waiting for pid 1056147
[2025-10-11 17:40:10] 2025-10-11 14:31:33,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 17:40:10] 2025-10-11 14:31:33,531 | INFO     | collected zombie processes
[2025-10-11 17:40:10] 2025-10-11 14:31:33,532 | INFO     | will attempt to kill all subprocesses of pid=1056147
[2025-10-11 17:40:10] 2025-10-11 14:31:35,480 | INFO     | process IDs to be killed: [1056147] (in reverse order)
[2025-10-11 17:40:10] 2025-10-11 14:31:36,726 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 17:40:10] 2025-10-11 14:31:36,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 17:40:10] 2025-10-11 14:31:36,827 | INFO     | did not find any defunct processes belonging to 1056147
[2025-10-11 17:40:10] 2025-10-11 14:31:36,954 | INFO     | did not find any defunct processes belonging to 1056147
[2025-10-11 17:40:10] 2025-10-11 14:31:36,955 | INFO     | ready for new job
[2025-10-11 17:40:10] 2025-10-11 14:31:37,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 17:40:10] 2025-10-11 14:31:37,004 | INFO     | ***************************************
[2025-10-11 17:40:10] 2025-10-11 14:31:37,004 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 17:40:10] 2025-10-11 14:31:37,004 | INFO     | ***************************************
[2025-10-11 17:40:10] 2025-10-11 14:31:37,005 | INFO     | 
[2025-10-11 17:40:10] 2025-10-11 14:31:37,055 | INFO     | architecture information:
[2025-10-11 17:40:10] 2025-10-11 14:31:37,088 | INFO     | executing command: cat /etc/os-release
[2025-10-11 17:40:10] 2025-10-11 14:31:37,251 | INFO     | cat /etc/os-release:
[2025-10-11 17:40:10] NAME="CentOS Linux"
[2025-10-11 17:40:10] VERSION="7 (Core)"
[2025-10-11 17:40:10] ID="centos"
[2025-10-11 17:40:10] ID_LIKE="rhel fedora"
[2025-10-11 17:40:10] VERSION_ID="7"
[2025-10-11 17:40:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 17:40:10] ANSI_COLOR="0;31"
[2025-10-11 17:40:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 17:40:10] HOME_URL="https://www.centos.org/"
[2025-10-11 17:40:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 17:40:10] 
[2025-10-11 17:40:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 17:40:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 17:40:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 17:40:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 17:40:10] 
[2025-10-11 17:40:10] 2025-10-11 14:31:37,252 | INFO     | ***************************************
[2025-10-11 17:40:10] 2025-10-11 14:31:37,755 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 17:40:10] 2025-10-11 14:31:37,848 | INFO     | sufficient remaining disk space (74536976384 B)
[2025-10-11 17:40:10] 2025-10-11 14:31:37,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 17:40:10] 2025-10-11 14:31:37,863 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 17:40:10] 2025-10-11 14:31:37,863 | INFO     | update_server=False
[2025-10-11 17:40:10] 2025-10-11 14:31:37,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 17:40:10] 2025-10-11 14:31:37,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:40:10] 2025-10-11 14:31:37,872 | INFO     | all job control threads have been joined
[2025-10-11 17:40:10] 2025-10-11 14:31:37,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 17:40:10] 2025-10-11 14:31:37,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 17:40:10] 2025-10-11 14:31:37,994 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 17:40:10] 2025-10-11 14:31:37,994 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 17:40:10] 2025-10-11 14:31:38,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 17:40:10] 2025-10-11 14:31:38,002 | INFO     | will abort loop
[2025-10-11 17:40:10] 2025-10-11 14:31:38,172 | INFO     | all payload control threads have been joined
[2025-10-11 17:40:10] 2025-10-11 14:31:38,742 | INFO     | all data control threads have been joined
[2025-10-11 17:40:10] 2025-10-11 14:31:38,869 | INFO     | [job] retrieve thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:38,879 | INFO     | [job] queue monitor thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:38,883 | INFO     | [job] control thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:39,014 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:39,038 | INFO     | [job] job monitor thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:39,178 | INFO     | [payload] control thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:39,290 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:39,301 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:39,428 | INFO     | [payload] validate_post thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:39,561 | INFO     | [payload] failed_post thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:39,747 | INFO     | [data] control thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:39,886 | INFO     | [data] copytool_out thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:40,147 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:40,220 | INFO     | [data] copytool_in thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:40,348 | INFO     | [job] validate thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:31:41,891 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 17:40:10] 2025-10-11 14:32:07,854 | INFO     | PID=1038970 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 17:40:10] 2025-10-11 14:32:07,855 | INFO     | .. there are 41 such processes running
[2025-10-11 17:40:10] 2025-10-11 14:32:07,875 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 17:40:10] 2025-10-11 14:32:07,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 17:40:10] 2025-10-11 14:32:07,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 17:40:10] 2025-10-11 14:32:16,447 | INFO     | [monitor] cgroup control has ended
[2025-10-11 17:40:10] 2025-10-11 14:32:16,469 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705885185856)>', '<ExcThread(monitor, started 139704775190272)>']
[2025-10-11 17:40:10] 2025-10-11 14:32:16,960 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 17:40:10] 2025-10-11 14:32:16,960 | INFO     | [monitor] control thread has ended
[2025-10-11 17:40:10] 2025-10-11 14:32:21,495 | INFO     | all workflow threads have been joined
[2025-10-11 17:40:10] 2025-10-11 14:32:21,497 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 17:40:10] 2025-10-11 14:32:21,497 | INFO     | traces error code: 0
[2025-10-11 17:40:10] 2025-10-11 14:32:21,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 17:40:10] 2025-10-11 14:32:21,995 [wrapper] ==== pilot stdout END ====
[2025-10-11 17:40:10] 2025-10-11 14:32:22,106 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 17:40:10] 2025-10-11 14:32:22,164 [wrapper] pilotpid: 1038970
[2025-10-11 17:40:10] 2025-10-11 14:32:22,220 [wrapper] Pilot exit status: 0
[2025-10-11 17:40:10] 2025-10-11 14:32:22,542 [wrapper] pandaids: 6837732253
[2025-10-11 17:40:10] 2025-10-11 14:32:23,856 [wrapper] cleanup supervisor_pilot 3305289 1038971
[2025-10-11 17:40:10] 2025-10-11 14:32:24,026 [wrapper] Test setup, not cleaning
[2025-10-11 17:40:10] 2025-10-11 14:32:24,033 [wrapper] apfmon messages muted
[2025-10-11 17:40:10] 2025-10-11 14:32:24,062 [wrapper] ==== wrapper stdout END ====
[2025-10-11 17:40:10] 2025-10-11 14:32:24,132 [wrapper] ==== wrapper stderr END ====
[2025-10-11 17:40:10]  *** Error codes and diagnostics ***
[2025-10-11 17:40:10]     "exeErrorCode": 0,
[2025-10-11 17:40:10]     "exeErrorDiag": "",
[2025-10-11 17:40:10]     "pilotErrorCode": 0,
[2025-10-11 17:40:10]     "pilotErrorDiag": "",
[2025-10-11 17:40:10]  *** Listing of results directory ***
[2025-10-11 17:40:10] total 415924
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 16:08 pilot3.tar.gz
[2025-10-11 17:40:10] -rwx------. 1 boincer umatlas     36292 Oct 10 16:16 runpilot2-wrapper.sh
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 16:16 queuedata.json
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 17:40:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:02 run_atlas
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:02 job.xml
[2025-10-11 17:40:10] -rw-r--r--. 2 boincer umatlas 223679513 Oct 11 00:02 EVNT.46676267._001801.pool.root.1
[2025-10-11 17:40:10] -rw-r--r--. 2 boincer umatlas    569672 Oct 11 00:02 input.tar.gz
[2025-10-11 17:40:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 17:40:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:02 shared
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:02 boinc_lockfile
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 00:02 pandaJob.out
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas    975509 Oct 11 00:04 agis_schedconf.cvmfs.json
[2025-10-11 17:40:10] drwx------. 5 boincer umatlas      4096 Oct 11 00:04 pilot3
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas 189248924 Oct 11 10:22 HITS.46676269._044505.pool.root.1
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas       530 Oct 11 10:23 boinc_task_state.xml
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas      1043 Oct 11 10:30 memory_monitor_summary.json
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas   1560580 Oct 11 10:30 agis_ddmendpoints.agis.ALL.json
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas    708360 Oct 11 10:30 log.46676269._044505.job.log.tgz.1
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas        95 Oct 11 10:31 pilot_heartbeat.json
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas      7829 Oct 11 10:31 heartbeat.json
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas      5010 Oct 11 10:32 pilotlog.txt
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas   3824165 Oct 11 10:32 log.46676269._044505.job.log.1
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas       357 Oct 11 10:32 output.list
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas       620 Oct 11 10:32 runtime_log
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas   4556800 Oct 11 10:32 result.tar.gz
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas      8689 Oct 11 10:32 runtime_log.err
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas       656 Oct 11 10:32 LTOKDmpiYR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmALeNDmxHhsRo.diag
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas      6657 Oct 11 17:40 init_data.xml
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 17:40 boinc_mmap_file
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas     21561 Oct 11 17:40 stderr.txt
[2025-10-11 17:40:10] -rw-r--r--. 1 boincer umatlas        27 Oct 11 17:40 wrapper_checkpoint.txt
[2025-10-11 17:40:10] HITS file was successfully produced:
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas 189248924 Oct 11 10:22 shared/HITS.pool.root.1
[2025-10-11 17:40:10]  *** Contents of shared directory: ***
[2025-10-11 17:40:10] total 408292
[2025-10-11 17:40:10] -rw-r--r--. 2 boincer umatlas 223679513 Oct 11 00:02 ATLAS.root_0
[2025-10-11 17:40:10] -rw-r--r--. 2 boincer umatlas    569672 Oct 11 00:02 input.tar.gz
[2025-10-11 17:40:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas 189248924 Oct 11 10:22 HITS.pool.root.1
[2025-10-11 17:40:10] -rw-------. 1 boincer umatlas   4556800 Oct 11 10:32 result.tar.gz
17:40:12 (1027494): run_atlas exited; CPU time 51937.100454
17:40:12 (1027494): called boinc_finish(0)

</stderr_txt>
]]>

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