Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:12 (1323064): wrapper (7.7.26015): starting
00:03:12 (1323064): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:03:13] Arguments: --nthreads 9
[2025-10-11 00:03:13] Threads: 9
[2025-10-11 00:03:13] Checking for CVMFS
[2025-10-11 00:03:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:03:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:03:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:03:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:03:15] 2.13.2.0 839487 136144 241460 151571 3 137 28195974 32935937 26682 16776704 0 94326757 99.679 81190135 29165 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:03:15] CVMFS is ok
[2025-10-11 00:03:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:03:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:03:16] Further information can be found at the LHC@home message board.
[2025-10-11 00:03:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:03:16] Checking for apptainer binary...
[2025-10-11 00:03:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:03:16] Running /usr/bin/apptainer --version
[2025-10-11 00:03:16] apptainer version 1.4.3-1.el9
[2025-10-11 00:03:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:03:16] c-6-3.aglt2.org
[2025-10-11 00:03:16] apptainer works
[2025-10-11 00:03:16] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:03:16] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:03:17] Starting ATLAS job with PandaID=6837932277
[2025-10-11 00:03:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:11:34]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:11:34] 2025-10-11 17:05:54,419 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1540749999986
[2025-10-11 13:11:34] 2025-10-11 17:05:54,516 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6837932277/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:11:34] 2025-10-11 17:05:54,563 | INFO     | extracted standard info from prmon json
[2025-10-11 13:11:34] 2025-10-11 17:05:54,563 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:11:34] 2025-10-11 17:05:54,563 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:11:34] 2025-10-11 17:05:54,564 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:11:34] 2025-10-11 17:05:54,564 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:11:34] 2025-10-11 17:05:54,683 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:11:34] 2025-10-11 17:05:54,702 | INFO     | sum of square deviations: 138278197691.59555
[2025-10-11 13:11:34] 2025-10-11 17:05:54,933 | INFO     | sum of deviations: 262824724940.74872
[2025-10-11 13:11:34] 2025-10-11 17:05:54,934 | INFO     | mean x: 1760178986.9332461
[2025-10-11 13:11:34] 2025-10-11 17:05:54,934 | INFO     | mean y: 2324222.230366492
[2025-10-11 13:11:34] 2025-10-11 17:05:54,934 | INFO     | -- intersect: -3343239762.62141
[2025-10-11 13:11:34] 2025-10-11 17:05:54,934 | INFO     | intersect: -3343239762.62141
[2025-10-11 13:11:34] 2025-10-11 17:05:54,935 | INFO     | chi2: 6.074962666923876
[2025-10-11 13:11:34] 2025-10-11 17:05:54,939 | INFO     | sum of square deviations: 135581066586.52164
[2025-10-11 13:11:34] 2025-10-11 17:05:55,028 | INFO     | sum of deviations: 362093381773.7386
[2025-10-11 13:11:34] 2025-10-11 17:05:55,028 | INFO     | mean x: 1760178834.4347825
[2025-10-11 13:11:34] 2025-10-11 17:05:55,029 | INFO     | mean y: 2329815.1765480894
[2025-10-11 13:11:34] 2025-10-11 17:05:55,029 | INFO     | -- intersect: -4698541204.158006
[2025-10-11 13:11:34] 2025-10-11 17:05:55,029 | INFO     | intersect: -4698541204.158006
[2025-10-11 13:11:34] 2025-10-11 17:05:55,030 | INFO     | chi2: 4.569151858098046
[2025-10-11 13:11:34] 2025-10-11 17:05:55,030 | INFO     | current chi2=4.569151858098046 (change=24.78716152486768 %)
[2025-10-11 13:11:34] 2025-10-11 17:05:55,030 | INFO     | right removable region: 758
[2025-10-11 13:11:34] 2025-10-11 17:05:55,031 | INFO     | sum of square deviations: 135580911280.65079
[2025-10-11 13:11:34] 2025-10-11 17:05:55,154 | INFO     | sum of deviations: 62950186245.23965
[2025-10-11 13:11:34] 2025-10-11 17:05:55,155 | INFO     | mean x: 1760179139.4361002
[2025-10-11 13:11:34] 2025-10-11 17:05:55,206 | INFO     | mean y: 2335513.1080368906
[2025-10-11 13:11:34] 2025-10-11 17:05:55,206 | INFO     | -- intersect: -814915260.6614805
[2025-10-11 13:11:34] 2025-10-11 17:05:55,206 | INFO     | intersect: -814915260.6614805
[2025-10-11 13:11:34] 2025-10-11 17:05:55,229 | INFO     | chi2: 3.1447618898209253
[2025-10-11 13:11:34] 2025-10-11 17:05:55,229 | INFO     | current chi2=3.1447618898209253 (change=48.23405406352382 %)
[2025-10-11 13:11:34] 2025-10-11 17:05:55,230 | INFO     | sum of square deviations: 132918974400.07024
[2025-10-11 13:11:34] 2025-10-11 17:05:55,329 | INFO     | sum of deviations: -8602545245.741493
[2025-10-11 13:11:34] 2025-10-11 17:05:55,330 | INFO     | mean x: 1760179291.9376657
[2025-10-11 13:11:34] 2025-10-11 17:05:55,330 | INFO     | mean y: 2339611.4310344825
[2025-10-11 13:11:34] 2025-10-11 17:05:55,330 | INFO     | -- intersect: 116258802.18505968
[2025-10-11 13:11:34] 2025-10-11 17:05:55,330 | INFO     | intersect: 116258802.18505968
[2025-10-11 13:11:34] 2025-10-11 17:05:55,331 | INFO     | chi2: 2.7894102479495704
[2025-10-11 13:11:34] 2025-10-11 17:05:55,331 | INFO     | current chi2=2.7894102479495704 (change=11.29979484365953 %)
[2025-10-11 13:11:34] 2025-10-11 17:05:55,332 | INFO     | left removable region: 20
[2025-10-11 13:11:34] 2025-10-11 17:05:55,337 | INFO     | sum of square deviations: 124635989028.04926
[2025-10-11 13:11:34] 2025-10-11 17:05:55,383 | INFO     | sum of deviations: -59097614281.60974
[2025-10-11 13:11:34] 2025-10-11 17:05:55,383 | INFO     | mean x: 1760179413.9268293
[2025-10-11 13:11:34] 2025-10-11 17:05:55,383 | INFO     | mean y: 2354297.8590785908
[2025-10-11 13:11:34] 2025-10-11 17:05:55,383 | INFO     | -- intersect: 836963987.0979346
[2025-10-11 13:11:34] 2025-10-11 17:05:55,383 | INFO     | intersect: 836963987.0979346
[2025-10-11 13:11:34] 2025-10-11 17:05:55,384 | INFO     | chi2: 0.44336836264772866
[2025-10-11 13:11:34] 2025-10-11 17:05:55,385 | INFO     | -- intersect: 836963987.0979346
[2025-10-11 13:11:34] 2025-10-11 17:05:55,385 | INFO     | current memory leak: -0.47 B/s (using 738 data points, chi2=0.44)
[2025-10-11 13:11:34] 2025-10-11 17:05:55,386 | INFO     | could have reported an average CPU frequency of 2600 MHz (29 samples)
[2025-10-11 13:11:34] 2025-10-11 17:05:55,386 | INFO     | ..............................
[2025-10-11 13:11:34] 2025-10-11 17:05:55,386 | INFO     | . Timing measurements:
[2025-10-11 13:11:34] 2025-10-11 17:05:55,386 | INFO     | . get job = 0 s
[2025-10-11 13:11:34] 2025-10-11 17:05:55,386 | INFO     | . initial setup = 7 s
[2025-10-11 13:11:34] 2025-10-11 17:05:55,386 | INFO     | . payload setup = 67 s
[2025-10-11 13:11:34] 2025-10-11 17:05:55,387 | INFO     | . stage-in = 0 s
[2025-10-11 13:11:34] 2025-10-11 17:05:55,387 | INFO     | . payload execution = 46623 s
[2025-10-11 13:11:34] 2025-10-11 17:05:55,387 | INFO     | . stage-out = 8 s
[2025-10-11 13:11:34] 2025-10-11 17:05:55,387 | INFO     | . log creation = 1 s
[2025-10-11 13:11:34] 2025-10-11 17:05:55,387 | INFO     | ..............................
[2025-10-11 13:11:34] 2025-10-11 17:05:56,103 | INFO     | 
[2025-10-11 13:11:34] 2025-10-11 17:05:56,107 | INFO     | job summary report
[2025-10-11 13:11:34] 2025-10-11 17:05:56,107 | INFO     | --------------------------------------------------
[2025-10-11 13:11:34] 2025-10-11 17:05:56,108 | INFO     | PanDA job id: 6837932277
[2025-10-11 13:11:34] 2025-10-11 17:05:56,115 | INFO     | task id: 46676269
[2025-10-11 13:11:34] 2025-10-11 17:05:56,115 | INFO     | errors: (none)
[2025-10-11 13:11:34] 2025-10-11 17:05:56,115 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:11:34] 2025-10-11 17:05:56,115 | INFO     | pilot state: finished 
[2025-10-11 13:11:34] 2025-10-11 17:05:56,115 | INFO     | transexitcode: 0
[2025-10-11 13:11:34] 2025-10-11 17:05:56,115 | INFO     | exeerrorcode: 0
[2025-10-11 13:11:34] 2025-10-11 17:05:56,115 | INFO     | exeerrordiag: 
[2025-10-11 13:11:34] 2025-10-11 17:05:56,116 | INFO     | exitcode: 0
[2025-10-11 13:11:34] 2025-10-11 17:05:56,116 | INFO     | exitmsg: OK
[2025-10-11 13:11:34] 2025-10-11 17:05:56,116 | INFO     | cpuconsumptiontime: 50578 s
[2025-10-11 13:11:34] 2025-10-11 17:05:56,116 | INFO     | nevents: 400
[2025-10-11 13:11:34] 2025-10-11 17:05:56,116 | INFO     | neventsw: 0
[2025-10-11 13:11:34] 2025-10-11 17:05:56,123 | INFO     | pid: 1373284
[2025-10-11 13:11:34] 2025-10-11 17:05:56,123 | INFO     | pgrp: 1373284
[2025-10-11 13:11:34] 2025-10-11 17:05:56,123 | INFO     | corecount: 9
[2025-10-11 13:11:34] 2025-10-11 17:05:56,123 | INFO     | event service: False
[2025-10-11 13:11:34] 2025-10-11 17:05:56,123 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348913, 3: 2348913, 4: 2348941, 15: 2348969, 26: 2349125, 38: 2349153, 49: 2349181, 52: 2349471, 60: 2349499, 46697: 2394569, 4
[2025-10-11 13:11:34] 2025-10-11 17:05:56,123 | INFO     | --------------------------------------------------
[2025-10-11 13:11:34] 2025-10-11 17:05:56,123 | INFO     | 
[2025-10-11 13:11:34] 2025-10-11 17:05:56,124 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 13:11:34] 2025-10-11 17:05:56,249 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,249 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,249 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,249 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,251 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:11:34] 2025-10-11 17:05:56,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,252 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:11:34] 2025-10-11 17:05:56,256 | INFO     | job 6837932277 has completed (purged errors)
[2025-10-11 13:11:34] 2025-10-11 17:05:56,256 | INFO     | overall cleanup function is called
[2025-10-11 13:11:34] 2025-10-11 17:05:57,285 | INFO     | --- collectZombieJob: --- 10, [1373284]
[2025-10-11 13:11:34] 2025-10-11 17:05:57,285 | INFO     | zombie collector waiting for pid 1373284
[2025-10-11 13:11:34] 2025-10-11 17:05:57,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:11:34] 2025-10-11 17:05:57,291 | INFO     | collected zombie processes
[2025-10-11 13:11:34] 2025-10-11 17:05:57,291 | INFO     | will attempt to kill all subprocesses of pid=1373284
[2025-10-11 13:11:34] 2025-10-11 17:05:59,739 | INFO     | PID=1336588 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:11:34] 2025-10-11 17:05:59,739 | INFO     | .. there are 39 such processes running
[2025-10-11 13:11:34] 2025-10-11 17:06:01,155 | INFO     | process IDs to be killed: [1373284] (in reverse order)
[2025-10-11 13:11:34] 2025-10-11 17:06:01,994 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:11:34] 2025-10-11 17:06:01,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:11:34] 2025-10-11 17:06:02,025 | INFO     | did not find any defunct processes belonging to 1373284
[2025-10-11 13:11:34] 2025-10-11 17:06:02,042 | INFO     | did not find any defunct processes belonging to 1373284
[2025-10-11 13:11:34] 2025-10-11 17:06:02,134 | INFO     | ready for new job
[2025-10-11 13:11:34] 2025-10-11 17:06:02,134 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:11:34] 2025-10-11 17:06:02,152 | INFO     | ***************************************
[2025-10-11 13:11:34] 2025-10-11 17:06:02,152 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:11:34] 2025-10-11 17:06:02,152 | INFO     | ***************************************
[2025-10-11 13:11:34] 2025-10-11 17:06:02,152 | INFO     | 
[2025-10-11 13:11:34] 2025-10-11 17:06:02,200 | INFO     | architecture information:
[2025-10-11 13:11:34] 2025-10-11 17:06:02,270 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:11:34] 2025-10-11 17:06:02,489 | INFO     | cat /etc/os-release:
[2025-10-11 13:11:34] NAME="CentOS Linux"
[2025-10-11 13:11:34] VERSION="7 (Core)"
[2025-10-11 13:11:34] ID="centos"
[2025-10-11 13:11:34] ID_LIKE="rhel fedora"
[2025-10-11 13:11:34] VERSION_ID="7"
[2025-10-11 13:11:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:11:34] ANSI_COLOR="0;31"
[2025-10-11 13:11:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:11:34] HOME_URL="https://www.centos.org/"
[2025-10-11 13:11:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:11:34] 
[2025-10-11 13:11:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:11:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:11:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:11:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:11:34] 
[2025-10-11 13:11:34] 2025-10-11 17:06:02,489 | INFO     | ***************************************
[2025-10-11 13:11:34] 2025-10-11 17:06:02,993 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 13:11:34] 2025-10-11 17:06:03,077 | INFO     | sufficient remaining disk space (75670487040 B)
[2025-10-11 13:11:34] 2025-10-11 17:06:03,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:11:34] 2025-10-11 17:06:03,078 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:11:34] 2025-10-11 17:06:03,078 | INFO     | update_server=False
[2025-10-11 13:11:34] 2025-10-11 17:06:03,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:11:34] 2025-10-11 17:06:03,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:11:34] 2025-10-11 17:06:03,119 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 13:11:34] 2025-10-11 17:06:03,119 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 13:11:34] 2025-10-11 17:06:03,119 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:11:34] 2025-10-11 17:06:03,119 | INFO     | will abort loop
[2025-10-11 13:11:34] 2025-10-11 17:06:03,536 | INFO     | all payload control threads have been joined
[2025-10-11 13:11:34] 2025-10-11 17:06:04,016 | INFO     | all data control threads have been joined
[2025-10-11 13:11:34] 2025-10-11 17:06:04,075 | INFO     | all job control threads have been joined
[2025-10-11 13:11:34] 2025-10-11 17:06:04,085 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:04,130 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:04,245 | INFO     | [job] validate thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:04,247 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:04,338 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:04,542 | INFO     | [payload] control thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:04,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:11:34] 2025-10-11 17:06:05,023 | INFO     | [data] control thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:05,081 | INFO     | [job] control thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:05,087 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:05,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:11:34] 2025-10-11 17:06:05,355 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:05,355 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:05,356 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:05,362 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:05,496 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:06,254 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:08,886 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:11:34] 2025-10-11 17:06:32,349 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:11:34] 2025-10-11 17:06:33,635 | INFO     | PID=1336588 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:11:34] 2025-10-11 17:06:33,635 | INFO     | .. there are 39 such processes running
[2025-10-11 13:11:34] 2025-10-11 17:06:33,636 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:11:34] 2025-10-11 17:06:33,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:11:34] 2025-10-11 17:06:33,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:11:34] 2025-10-11 17:06:33,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140492543821632)>', '<ExcThread(monitor, started 140492062844672)>']
[2025-10-11 13:11:34] 2025-10-11 17:06:34,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:11:34] 2025-10-11 17:06:34,643 | INFO     | [monitor] control thread has ended
[2025-10-11 13:11:34] 2025-10-11 17:06:38,849 | INFO     | all workflow threads have been joined
[2025-10-11 13:11:34] 2025-10-11 17:06:38,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:11:34] 2025-10-11 17:06:38,849 | INFO     | traces error code: 0
[2025-10-11 13:11:34] 2025-10-11 17:06:38,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:11:34] 2025-10-11 17:06:40,343 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:11:34] 2025-10-11 17:06:40,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:11:34] 2025-10-11 17:06:40,405 [wrapper] pilotpid: 1336588
[2025-10-11 13:11:34] 2025-10-11 17:06:40,448 [wrapper] Pilot exit status: 0
[2025-10-11 13:11:34] 2025-10-11 17:06:40,583 [wrapper] pandaids: 6837932277
[2025-10-11 13:11:34] 2025-10-11 17:06:41,233 [wrapper] cleanup supervisor_pilot   96398 1336589
[2025-10-11 13:11:34] 2025-10-11 17:06:41,275 [wrapper] Test setup, not cleaning
[2025-10-11 13:11:34] 2025-10-11 17:06:41,293 [wrapper] apfmon messages muted
[2025-10-11 13:11:34] 2025-10-11 17:06:41,333 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:11:34] 2025-10-11 17:06:41,382 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:11:34]  *** Error codes and diagnostics ***
[2025-10-11 13:11:34]     "exeErrorCode": 0,
[2025-10-11 13:11:34]     "exeErrorDiag": "",
[2025-10-11 13:11:34]     "pilotErrorCode": 0,
[2025-10-11 13:11:34]     "pilotErrorDiag": "",
[2025-10-11 13:11:34]  *** Listing of results directory ***
[2025-10-11 13:11:34] total 416624
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:47 queuedata.json
[2025-10-11 13:11:34] -rwx------. 1 boincer umatlas     36292 Oct 10 21:49 runpilot2-wrapper.sh
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:11:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:03 run_atlas
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:03 job.xml
[2025-10-11 13:11:34] -rw-r--r--. 2 boincer umatlas 220524047 Oct 11 00:03 EVNT.46676267._001968.pool.root.1
[2025-10-11 13:11:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:03 start_atlas.sh
[2025-10-11 13:11:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:03 shared
[2025-10-11 13:11:34] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 00:03 input.tar.gz
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:03 boinc_lockfile
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:03 pandaJob.out
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas    975509 Oct 11 00:04 agis_schedconf.cvmfs.json
[2025-10-11 13:11:34] drwx------. 5 boincer umatlas      4096 Oct 11 00:04 pilot3
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas 190410372 Oct 11 13:02 HITS.46676269._048795.pool.root.1
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas       531 Oct 11 13:03 boinc_task_state.xml
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas      1052 Oct 11 13:04 memory_monitor_summary.json
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas   1560580 Oct 11 13:05 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas    831584 Oct 11 13:05 log.46676269._048795.job.log.tgz.1
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas      7832 Oct 11 13:05 heartbeat.json
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas        95 Oct 11 13:06 pilot_heartbeat.json
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas      5010 Oct 11 13:06 pilotlog.txt
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas   5063800 Oct 11 13:06 log.46676269._048795.job.log.1
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas       357 Oct 11 13:06 output.list
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas       620 Oct 11 13:06 runtime_log
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas   5918720 Oct 11 13:06 result.tar.gz
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas      8689 Oct 11 13:06 runtime_log.err
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas       659 Oct 11 13:06 HTjLDmdudR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS2eNDmkD3kOn.diag
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas      6657 Oct 11 13:09 init_data.xml
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas        28 Oct 11 13:11 wrapper_checkpoint.txt
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 13:11 boinc_mmap_file
[2025-10-11 13:11:34] -rw-r--r--. 1 boincer umatlas     14903 Oct 11 13:11 stderr.txt
[2025-10-11 13:11:34] HITS file was successfully produced:
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas 190410372 Oct 11 13:02 shared/HITS.pool.root.1
[2025-10-11 13:11:34]  *** Contents of shared directory: ***
[2025-10-11 13:11:34] total 407664
[2025-10-11 13:11:34] -rw-r--r--. 2 boincer umatlas 220524047 Oct 11 00:03 ATLAS.root_0
[2025-10-11 13:11:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:03 start_atlas.sh
[2025-10-11 13:11:34] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 00:03 input.tar.gz
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas 190410372 Oct 11 13:02 HITS.pool.root.1
[2025-10-11 13:11:34] -rw-------. 1 boincer umatlas   5918720 Oct 11 13:06 result.tar.gz
13:11:56 (1323064): run_atlas exited; CPU time 52499.835131
13:11:56 (1323064): called boinc_finish(0)

</stderr_txt>
]]>

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