Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:16:36 (698533): wrapper (7.7.26015): starting
23:16:36 (698533): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 23:16:36] Arguments: --nthreads 12
[2025-10-11 23:16:36] Threads: 12
[2025-10-11 23:16:36] Checking for CVMFS
[2025-10-11 23:16:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 23:16:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 23:16:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 23:16:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 23:16:58] 2.13.2.0 1056763 128710 314880 151585 -831 727 32358805 32935936 28528 16776704 0 102503310 99.647 93780926 27827 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 23:16:58] CVMFS is ok
[2025-10-11 23:16:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:16:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:16:58] Further information can be found at the LHC@home message board.
[2025-10-11 23:16:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:16:58] Checking for apptainer binary...
[2025-10-11 23:16:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 23:16:58] Running /usr/bin/apptainer --version
[2025-10-11 23:16:58] apptainer version 1.4.3-1.el9
[2025-10-11 23:16:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:16:59] c-4-39.aglt2.org
[2025-10-11 23:16:59] apptainer works
[2025-10-11 23:16:59] Set ATHENA_PROC_NUMBER=12
[2025-10-11 23:16:59] Set ATHENA_CORE_NUMBER=12
[2025-10-11 23:16:59] Starting ATLAS job with PandaID=6837932272
[2025-10-11 23:16:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 15:55:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 15:55:29] 2025-10-12 19:44:52,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 15:55:29] 2025-10-12 19:44:53,413 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 15:55:29] 2025-10-12 19:44:53,423 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.180349999998
[2025-10-12 15:55:29] 2025-10-12 19:44:53,438 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837932272/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 15:55:29] 2025-10-12 19:44:53,439 | INFO     | extracted standard info from prmon json
[2025-10-12 15:55:29] 2025-10-12 19:44:53,439 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 15:55:29] 2025-10-12 19:44:53,439 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 15:55:29] 2025-10-12 19:44:53,440 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 15:55:29] 2025-10-12 19:44:53,440 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 15:55:29] 2025-10-12 19:44:53,473 | INFO     | fitting pss+swap vs Time
[2025-10-12 15:55:29] 2025-10-12 19:44:53,479 | INFO     | sum of square deviations: 282126120264.25415
[2025-10-12 15:55:29] 2025-10-12 19:44:53,557 | INFO     | sum of deviations: -635517049455.0961
[2025-10-12 15:55:29] 2025-10-12 19:44:53,557 | INFO     | mean x: 1760268713.371517
[2025-10-12 15:55:29] 2025-10-12 19:44:53,558 | INFO     | mean y: 2318245.453044376
[2025-10-12 15:55:29] 2025-10-12 19:44:53,558 | INFO     | -- intersect: 3967497995.28326
[2025-10-12 15:55:29] 2025-10-12 19:44:53,558 | INFO     | intersect: 3967497995.28326
[2025-10-12 15:55:29] 2025-10-12 19:44:53,607 | INFO     | chi2: 7.129794788607127
[2025-10-12 15:55:29] 2025-10-12 19:44:53,609 | INFO     | sum of square deviations: 277781385808.56006
[2025-10-12 15:55:29] 2025-10-12 19:44:53,846 | INFO     | sum of deviations: -373297507304.88794
[2025-10-12 15:55:29] 2025-10-12 19:44:53,847 | INFO     | mean x: 1760268560.873444
[2025-10-12 15:55:29] 2025-10-12 19:44:53,847 | INFO     | mean y: 2327442.074688797
[2025-10-12 15:55:29] 2025-10-12 19:44:53,847 | INFO     | -- intersect: 2367870633.7055297
[2025-10-12 15:55:29] 2025-10-12 19:44:53,848 | INFO     | intersect: 2367870633.7055297
[2025-10-12 15:55:29] 2025-10-12 19:44:53,885 | INFO     | chi2: 3.7452377121379814
[2025-10-12 15:55:29] 2025-10-12 19:44:53,885 | INFO     | current chi2=3.7452377121379814 (change=47.47060997993115 %)
[2025-10-12 15:55:29] 2025-10-12 19:44:53,887 | INFO     | sum of square deviations: 273481489402.85776
[2025-10-12 15:55:29] 2025-10-12 19:44:54,022 | INFO     | sum of deviations: -315927287796.871
[2025-10-12 15:55:29] 2025-10-12 19:44:54,023 | INFO     | mean x: 1760268408.375391
[2025-10-12 15:55:29] 2025-10-12 19:44:54,027 | INFO     | mean y: 2329477.9885297185
[2025-10-12 15:55:29] 2025-10-12 19:44:54,027 | INFO     | -- intersect: 2035801012.9974396
[2025-10-12 15:55:29] 2025-10-12 19:44:54,027 | INFO     | intersect: 2035801012.9974396
[2025-10-12 15:55:29] 2025-10-12 19:44:54,029 | INFO     | chi2: 3.618309508101199
[2025-10-12 15:55:29] 2025-10-12 19:44:54,029 | INFO     | current chi2=3.618309508101199 (change=3.389056017069878 %)
[2025-10-12 15:55:29] 2025-10-12 19:44:54,029 | INFO     | right removable region: 958
[2025-10-12 15:55:29] 2025-10-12 19:44:54,030 | INFO     | sum of square deviations: 277781166208.56
[2025-10-12 15:55:29] 2025-10-12 19:44:54,052 | INFO     | time since job start (59223s) is within the limit (172800.0s)
[2025-10-12 15:55:29] 2025-10-12 19:44:54,078 | INFO     | sum of deviations: -815083748731.1597
[2025-10-12 15:55:29] 2025-10-12 19:44:54,078 | INFO     | mean x: 1760268865.873444
[2025-10-12 15:55:29] 2025-10-12 19:44:54,078 | INFO     | mean y: 2324539.3101659752
[2025-10-12 15:55:29] 2025-10-12 19:44:54,078 | INFO     | -- intersect: 5167421099.145476
[2025-10-12 15:55:29] 2025-10-12 19:44:54,079 | INFO     | intersect: 5167421099.145476
[2025-10-12 15:55:29] 2025-10-12 19:44:54,084 | INFO     | chi2: 5.356180687262939
[2025-10-12 15:55:29] 2025-10-12 19:44:54,084 | INFO     | current chi2=5.356180687262939 (change=24.876089059088894 %)
[2025-10-12 15:55:29] 2025-10-12 19:44:54,084 | INFO     | left removable region: 10
[2025-10-12 15:55:29] 2025-10-12 19:44:54,086 | INFO     | sum of square deviations: 264178077753.80588
[2025-10-12 15:55:29] 2025-10-12 19:44:54,131 | INFO     | sum of deviations: -472151647381.2736
[2025-10-12 15:55:29] 2025-10-12 19:44:54,131 | INFO     | mean x: 1760268682.8776371
[2025-10-12 15:55:29] 2025-10-12 19:44:54,131 | INFO     | mean y: 2335550.359704641
[2025-10-12 15:55:29] 2025-10-12 19:44:54,132 | INFO     | -- intersect: 3148371608.7675357
[2025-10-12 15:55:29] 2025-10-12 19:44:54,132 | INFO     | intersect: 3148371608.7675357
[2025-10-12 15:55:29] 2025-10-12 19:44:54,133 | INFO     | chi2: 1.7552146240083153
[2025-10-12 15:55:29] 2025-10-12 19:44:54,134 | INFO     | -- intersect: 3148371608.7675357
[2025-10-12 15:55:29] 2025-10-12 19:44:54,138 | INFO     | current memory leak: -1.79 B/s (using 948 data points, chi2=1.76)
[2025-10-12 15:55:29] 2025-10-12 19:44:54,139 | INFO     | could have reported an average CPU frequency of 2600 MHz (35 samples)
[2025-10-12 15:55:29] 2025-10-12 19:44:54,140 | INFO     | ..............................
[2025-10-12 15:55:29] 2025-10-12 19:44:54,140 | INFO     | . Timing measurements:
[2025-10-12 15:55:29] 2025-10-12 19:44:54,140 | INFO     | . get job = 0 s
[2025-10-12 15:55:29] 2025-10-12 19:44:54,140 | INFO     | . initial setup = 4 s
[2025-10-12 15:55:29] 2025-10-12 19:44:54,140 | INFO     | . payload setup = 33 s
[2025-10-12 15:55:29] 2025-10-12 19:44:54,140 | INFO     | . stage-in = 0 s
[2025-10-12 15:55:29] 2025-10-12 19:44:54,140 | INFO     | . payload execution = 59084 s
[2025-10-12 15:55:29] 2025-10-12 19:44:54,141 | INFO     | . stage-out = 7 s
[2025-10-12 15:55:29] 2025-10-12 19:44:54,141 | INFO     | . log creation = 0 s
[2025-10-12 15:55:29] 2025-10-12 19:44:54,141 | INFO     | ..............................
[2025-10-12 15:55:29] 2025-10-12 19:44:54,594 | INFO     | 
[2025-10-12 15:55:29] 2025-10-12 19:44:54,594 | INFO     | job summary report
[2025-10-12 15:55:29] 2025-10-12 19:44:54,594 | INFO     | --------------------------------------------------
[2025-10-12 15:55:29] 2025-10-12 19:44:54,594 | INFO     | PanDA job id: 6837932272
[2025-10-12 15:55:29] 2025-10-12 19:44:54,595 | INFO     | task id: 46676269
[2025-10-12 15:55:29] 2025-10-12 19:44:54,595 | INFO     | errors: (none)
[2025-10-12 15:55:29] 2025-10-12 19:44:54,595 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 15:55:29] 2025-10-12 19:44:54,595 | INFO     | pilot state: finished 
[2025-10-12 15:55:29] 2025-10-12 19:44:54,595 | INFO     | transexitcode: 0
[2025-10-12 15:55:29] 2025-10-12 19:44:54,595 | INFO     | exeerrorcode: 0
[2025-10-12 15:55:29] 2025-10-12 19:44:54,595 | INFO     | exeerrordiag: 
[2025-10-12 15:55:29] 2025-10-12 19:44:54,595 | INFO     | exitcode: 0
[2025-10-12 15:55:29] 2025-10-12 19:44:54,595 | INFO     | exitmsg: OK
[2025-10-12 15:55:29] 2025-10-12 19:44:54,595 | INFO     | cpuconsumptiontime: 51484 s
[2025-10-12 15:55:29] 2025-10-12 19:44:54,596 | INFO     | nevents: 400
[2025-10-12 15:55:29] 2025-10-12 19:44:54,596 | INFO     | neventsw: 0
[2025-10-12 15:55:29] 2025-10-12 19:44:54,596 | INFO     | pid: 712576
[2025-10-12 15:55:29] 2025-10-12 19:44:54,596 | INFO     | pgrp: 712576
[2025-10-12 15:55:29] 2025-10-12 19:44:54,596 | INFO     | corecount: 12
[2025-10-12 15:55:29] 2025-10-12 19:44:54,596 | INFO     | event service: False
[2025-10-12 15:55:29] 2025-10-12 19:44:54,596 | INFO     | sizes: {0: 2348680, 1: 2348879, 13: 2348879, 24: 2349225, 34: 2349225, 59122: 2397578, 59123: 2397705, 59133: 2406787, 59135: 2406843, 59160: 2407037}
[2025-10-12 15:55:29] 2025-10-12 19:44:54,596 | INFO     | --------------------------------------------------
[2025-10-12 15:55:29] 2025-10-12 19:44:54,596 | INFO     | 
[2025-10-12 15:55:29] 2025-10-12 19:44:54,596 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 15:55:29] 2025-10-12 19:44:54,876 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,877 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,877 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,877 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,878 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,878 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,878 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,879 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 15:55:29] 2025-10-12 19:44:54,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,879 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 15:55:29] 2025-10-12 19:44:54,879 | INFO     | job 6837932272 has completed (purged errors)
[2025-10-12 15:55:29] 2025-10-12 19:44:54,880 | INFO     | overall cleanup function is called
[2025-10-12 15:55:29] 2025-10-12 19:44:55,897 | INFO     | --- collectZombieJob: --- 10, [712576]
[2025-10-12 15:55:29] 2025-10-12 19:44:55,897 | INFO     | zombie collector waiting for pid 712576
[2025-10-12 15:55:29] 2025-10-12 19:44:55,897 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 15:55:29] 2025-10-12 19:44:55,897 | INFO     | collected zombie processes
[2025-10-12 15:55:29] 2025-10-12 19:44:55,897 | INFO     | will attempt to kill all subprocesses of pid=712576
[2025-10-12 15:55:29] 2025-10-12 19:44:58,548 | INFO     | PID=704717 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 15:55:29] 2025-10-12 19:44:58,548 | INFO     | .. there are 36 such processes running
[2025-10-12 15:55:29] 2025-10-12 19:44:58,590 | INFO     | process IDs to be killed: [712576] (in reverse order)
[2025-10-12 15:55:29] 2025-10-12 19:44:58,857 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 15:55:29] 2025-10-12 19:44:58,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 15:55:29] 2025-10-12 19:44:58,898 | INFO     | did not find any defunct processes belonging to 712576
[2025-10-12 15:55:29] 2025-10-12 19:44:58,916 | INFO     | did not find any defunct processes belonging to 712576
[2025-10-12 15:55:29] 2025-10-12 19:44:58,920 | INFO     | ready for new job
[2025-10-12 15:55:29] 2025-10-12 19:44:58,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 15:55:29] 2025-10-12 19:44:58,928 | INFO     | ***************************************
[2025-10-12 15:55:29] 2025-10-12 19:44:58,929 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 15:55:29] 2025-10-12 19:44:58,929 | INFO     | ***************************************
[2025-10-12 15:55:29] 2025-10-12 19:44:58,929 | INFO     | 
[2025-10-12 15:55:29] 2025-10-12 19:44:58,945 | INFO     | architecture information:
[2025-10-12 15:55:29] 2025-10-12 19:44:58,949 | INFO     | executing command: cat /etc/os-release
[2025-10-12 15:55:29] 2025-10-12 19:44:58,995 | INFO     | cat /etc/os-release:
[2025-10-12 15:55:29] NAME="CentOS Linux"
[2025-10-12 15:55:29] VERSION="7 (Core)"
[2025-10-12 15:55:29] ID="centos"
[2025-10-12 15:55:29] ID_LIKE="rhel fedora"
[2025-10-12 15:55:29] VERSION_ID="7"
[2025-10-12 15:55:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 15:55:29] ANSI_COLOR="0;31"
[2025-10-12 15:55:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 15:55:29] HOME_URL="https://www.centos.org/"
[2025-10-12 15:55:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 15:55:29] 
[2025-10-12 15:55:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 15:55:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 15:55:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 15:55:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 15:55:29] 
[2025-10-12 15:55:29] 2025-10-12 19:44:58,996 | INFO     | ***************************************
[2025-10-12 15:55:29] 2025-10-12 19:44:59,500 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 15:55:29] 2025-10-12 19:44:59,549 | INFO     | sufficient remaining disk space (74568433664 B)
[2025-10-12 15:55:29] 2025-10-12 19:44:59,550 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 15:55:29] 2025-10-12 19:44:59,550 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 15:55:29] 2025-10-12 19:44:59,550 | INFO     | update_server=False
[2025-10-12 15:55:29] 2025-10-12 19:44:59,550 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 15:55:29] 2025-10-12 19:44:59,551 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:55:29] 2025-10-12 19:44:59,551 | INFO     | aborting loop
[2025-10-12 15:55:29] 2025-10-12 19:44:59,551 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 15:55:29] 2025-10-12 19:44:59,551 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 15:55:29] 2025-10-12 19:44:59,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 15:55:29] 2025-10-12 19:44:59,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 15:55:29] 2025-10-12 19:44:59,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 15:55:29] 2025-10-12 19:45:00,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 15:55:29] 2025-10-12 19:45:00,428 | INFO     | all job control threads have been joined
[2025-10-12 15:55:29] 2025-10-12 19:45:00,521 | INFO     | all data control threads have been joined
[2025-10-12 15:55:29] 2025-10-12 19:45:00,558 | INFO     | [job] retrieve thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:00,559 | INFO     | [job] job monitor thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:00,581 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:00,738 | INFO     | [job] queue monitor thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:00,763 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:01,015 | INFO     | [data] copytool_in thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:01,016 | INFO     | [job] validate thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:01,067 | INFO     | all payload control threads have been joined
[2025-10-12 15:55:29] 2025-10-12 19:45:01,096 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:01,116 | INFO     | [payload] validate_post thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:01,298 | INFO     | [payload] failed_post thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:01,422 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:01,437 | INFO     | [job] control thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:01,527 | INFO     | [data] control thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:02,083 | INFO     | [payload] control thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:02,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 15:55:29] 2025-10-12 19:45:02,353 | INFO     | [data] copytool_out thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:06,387 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 15:55:29] 2025-10-12 19:45:13,326 | INFO     | [monitor] cgroup control has ended
[2025-10-12 15:55:29] 2025-10-12 19:45:14,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263850518336)>', '<ExcThread(monitor, started 140263213225728)>']
[2025-10-12 15:55:29] 2025-10-12 19:45:15,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 15:55:29] 2025-10-12 19:45:15,667 | INFO     | [monitor] control thread has ended
[2025-10-12 15:55:29] 2025-10-12 19:45:19,889 | INFO     | all workflow threads have been joined
[2025-10-12 15:55:29] 2025-10-12 19:45:19,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 15:55:29] 2025-10-12 19:45:19,890 | INFO     | traces error code: 0
[2025-10-12 15:55:29] 2025-10-12 19:45:19,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 15:55:29] 2025-10-12 19:45:20,319 [wrapper] ==== pilot stdout END ====
[2025-10-12 15:55:29] 2025-10-12 19:45:20,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 15:55:29] 2025-10-12 19:45:20,397 [wrapper] pilotpid: 704717
[2025-10-12 15:55:29] 2025-10-12 19:45:20,400 [wrapper] Pilot exit status: 0
[2025-10-12 15:55:29] 2025-10-12 19:45:20,429 [wrapper] pandaids: 6837932272
[2025-10-12 15:55:29] 2025-10-12 19:45:20,748 [wrapper] cleanup supervisor_pilot 3595364 704718
[2025-10-12 15:55:29] 2025-10-12 19:45:20,808 [wrapper] Test setup, not cleaning
[2025-10-12 15:55:29] 2025-10-12 19:45:20,838 [wrapper] apfmon messages muted
[2025-10-12 15:55:29] 2025-10-12 19:45:20,894 [wrapper] ==== wrapper stdout END ====
[2025-10-12 15:55:29] 2025-10-12 19:45:20,929 [wrapper] ==== wrapper stderr END ====
[2025-10-12 15:55:29]  *** Error codes and diagnostics ***
[2025-10-12 15:55:29]     "exeErrorCode": 0,
[2025-10-12 15:55:29]     "exeErrorDiag": "",
[2025-10-12 15:55:29]     "pilotErrorCode": 0,
[2025-10-12 15:55:29]     "pilotErrorDiag": "",
[2025-10-12 15:55:29]  *** Listing of results directory ***
[2025-10-12 15:55:29] total 424500
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:47 queuedata.json
[2025-10-12 15:55:29] -rwx------. 1 boincer umatlas     36292 Oct 10 21:49 runpilot2-wrapper.sh
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas       100 Oct 11 23:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 15:55:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 23:16 run_atlas
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas       105 Oct 11 23:16 job.xml
[2025-10-12 15:55:29] -rw-r--r--. 2 boincer umatlas 220524047 Oct 11 23:16 EVNT.46676267._001968.pool.root.1
[2025-10-12 15:55:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 23:16 shared
[2025-10-12 15:55:29] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 23:16 input.tar.gz
[2025-10-12 15:55:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:16 start_atlas.sh
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas         0 Oct 11 23:16 boinc_lockfile
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas      2547 Oct 11 23:16 pandaJob.out
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas    975520 Oct 11 23:17 agis_schedconf.cvmfs.json
[2025-10-12 15:55:29] drwx------. 5 boincer umatlas      4096 Oct 11 23:17 pilot3
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas 197093644 Oct 12 15:40 HITS.46676269._048790.pool.root.1
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas       530 Oct 12 15:40 boinc_task_state.xml
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas      1044 Oct 12 15:44 memory_monitor_summary.json
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas   1560580 Oct 12 15:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas    949480 Oct 12 15:44 log.46676269._048790.job.log.tgz.1
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas        95 Oct 12 15:44 pilot_heartbeat.json
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas      7827 Oct 12 15:44 heartbeat.json
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas      4552 Oct 12 15:45 pilotlog.txt
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas   5634695 Oct 12 15:45 log.46676269._048790.job.log.1
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas       357 Oct 12 15:45 output.list
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas       620 Oct 12 15:45 runtime_log
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas   6604800 Oct 12 15:45 result.tar.gz
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas      8696 Oct 12 15:45 runtime_log.err
[2025-10-12 15:55:29] -rw-------. 1 boincer umatlas       655 Oct 12 15:45 avhLDmdudR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR2eNDmyvli4m.diag
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas      6657 Oct 12 15:55 init_data.xml
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas        27 Oct 12 15:55 wrapper_checkpoint.txt
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 15:55 boinc_mmap_file
[2025-10-12 15:55:29] -rw-r--r--. 1 boincer umatlas     21006 Oct 12 15:55 stderr.txt
[2025-10-12 15:55:30] HITS file was successfully produced:
[2025-10-12 15:55:30] -rw-------. 1 boincer umatlas 197093644 Oct 12 15:40 shared/HITS.pool.root.1
[2025-10-12 15:55:30]  *** Contents of shared directory: ***
[2025-10-12 15:55:30] total 414864
[2025-10-12 15:55:30] -rw-r--r--. 2 boincer umatlas 220524047 Oct 11 23:16 ATLAS.root_0
[2025-10-12 15:55:30] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 23:16 input.tar.gz
[2025-10-12 15:55:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 23:16 start_atlas.sh
[2025-10-12 15:55:30] -rw-------. 1 boincer umatlas 197093644 Oct 12 15:40 HITS.pool.root.1
[2025-10-12 15:55:30] -rw-------. 1 boincer umatlas   6604800 Oct 12 15:45 result.tar.gz
15:55:32 (698533): run_atlas exited; CPU time 53593.855537
15:55:32 (698533): called boinc_finish(0)

</stderr_txt>
]]>

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