Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:11 (4143737): wrapper (7.7.26015): starting
00:02:11 (4143737): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:02:11] Arguments: --nthreads 9
[2025-10-11 00:02:11] Threads: 9
[2025-10-11 00:02:11] Checking for CVMFS
[2025-10-11 00:02:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:02:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:02:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:02:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:02:15] 2.13.2.0 981271 127316 252060 151571 0 152 25517874 32935937 26914 16776704 0 98012632 99.675 79734740 29669 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:02:15] CVMFS is ok
[2025-10-11 00:02:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:02:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:02:15] Further information can be found at the LHC@home message board.
[2025-10-11 00:02:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:02:15] Checking for apptainer binary...
[2025-10-11 00:02:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:02:15] Running /usr/bin/apptainer --version
[2025-10-11 00:02:15] apptainer version 1.4.3-1.el9
[2025-10-11 00:02:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:02:16] c-4-36.aglt2.org
[2025-10-11 00:02:16] apptainer works
[2025-10-11 00:02:16] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:02:16] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:02:16] Starting ATLAS job with PandaID=6837873638
[2025-10-11 00:02:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:28:47]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:28:47] 2025-10-12 02:27:35,875 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 22:28:47] 2025-10-12 02:27:35,905 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1696499999985
[2025-10-11 22:28:47] 2025-10-12 02:27:35,927 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6837873638/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 22:28:47] 2025-10-12 02:27:35,928 | INFO     | extracted standard info from prmon json
[2025-10-11 22:28:47] 2025-10-12 02:27:35,928 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 22:28:47] 2025-10-12 02:27:35,928 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 22:28:47] 2025-10-12 02:27:35,928 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 22:28:47] 2025-10-12 02:27:35,929 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 22:28:47] 2025-10-12 02:27:35,977 | INFO     | fitting pss+swap vs Time
[2025-10-11 22:28:47] 2025-10-12 02:27:35,979 | INFO     | sum of square deviations: 708324118090.2291
[2025-10-11 22:28:47] 2025-10-12 02:27:36,087 | INFO     | sum of deviations: 2739923545205.0605
[2025-10-11 22:28:47] 2025-10-12 02:27:36,087 | INFO     | mean x: 1760195824.3151102
[2025-10-11 22:28:47] 2025-10-12 02:27:36,087 | INFO     | mean y: 2121487.419134396
[2025-10-11 22:28:47] 2025-10-12 02:27:36,087 | INFO     | -- intersect: -6806628716.111636
[2025-10-11 22:28:47] 2025-10-12 02:27:36,088 | INFO     | intersect: -6806628716.111636
[2025-10-11 22:28:47] 2025-10-12 02:27:36,099 | INFO     | chi2: 12.772186520554545
[2025-10-11 22:28:47] 2025-10-12 02:27:36,101 | INFO     | sum of square deviations: 700287213637.3628
[2025-10-11 22:28:47] 2025-10-12 02:27:36,176 | INFO     | sum of deviations: 2819619876005.0317
[2025-10-11 22:28:47] 2025-10-12 02:27:36,176 | INFO     | mean x: 1760195671.815549
[2025-10-11 22:28:47] 2025-10-12 02:27:36,176 | INFO     | mean y: 2122995.3513719514
[2025-10-11 22:28:47] 2025-10-12 02:27:36,176 | INFO     | -- intersect: -7085087231.050446
[2025-10-11 22:28:47] 2025-10-12 02:27:36,177 | INFO     | intersect: -7085087231.050446
[2025-10-11 22:28:47] 2025-10-12 02:27:36,183 | INFO     | chi2: 12.080981179790726
[2025-10-11 22:28:47] 2025-10-12 02:27:36,183 | INFO     | current chi2=12.080981179790726 (change=5.41180117947266 %)
[2025-10-11 22:28:47] 2025-10-12 02:27:36,183 | INFO     | right removable region: 1311
[2025-10-11 22:28:47] 2025-10-12 02:27:36,185 | INFO     | sum of square deviations: 700287040824.7296
[2025-10-11 22:28:47] 2025-10-12 02:27:36,267 | INFO     | sum of deviations: 2371781322244.0635
[2025-10-11 22:28:47] 2025-10-12 02:27:36,268 | INFO     | mean x: 1760195976.816311
[2025-10-11 22:28:47] 2025-10-12 02:27:36,268 | INFO     | mean y: 2128471.286585366
[2025-10-11 22:28:47] 2025-10-12 02:27:36,268 | INFO     | -- intersect: -5959426859.4894905
[2025-10-11 22:28:47] 2025-10-12 02:27:36,268 | INFO     | intersect: -5959426859.4894905
[2025-10-11 22:28:47] 2025-10-12 02:27:36,270 | INFO     | chi2: 8.905637991123479
[2025-10-11 22:28:47] 2025-10-12 02:27:36,270 | INFO     | current chi2=8.905637991123479 (change=30.273191854883652 %)
[2025-10-11 22:28:47] 2025-10-12 02:27:36,278 | INFO     | sum of square deviations: 692311147900.4958
[2025-10-11 22:28:47] 2025-10-12 02:27:36,313 | INFO     | time since job start (80600s) is within the limit (172800.0s)
[2025-10-11 22:28:47] 2025-10-12 02:27:36,394 | INFO     | sum of deviations: 2102304544397.9536
[2025-10-11 22:28:47] 2025-10-12 02:27:36,394 | INFO     | mean x: 1760196129.315991
[2025-10-11 22:28:47] 2025-10-12 02:27:36,395 | INFO     | mean y: 2133622.9686304512
[2025-10-11 22:28:47] 2025-10-12 02:27:36,395 | INFO     | -- intersect: -5342960606.576486
[2025-10-11 22:28:47] 2025-10-12 02:27:36,395 | INFO     | intersect: -5342960606.576486
[2025-10-11 22:28:47] 2025-10-12 02:27:36,397 | INFO     | chi2: 6.955407428221252
[2025-10-11 22:28:47] 2025-10-12 02:27:36,397 | INFO     | current chi2=6.955407428221252 (change=21.898830435798995 %)
[2025-10-11 22:28:47] 2025-10-12 02:27:36,397 | INFO     | left removable region: 20
[2025-10-11 22:28:47] 2025-10-12 02:27:36,399 | INFO     | sum of square deviations: 667196409287.6836
[2025-10-11 22:28:47] 2025-10-12 02:27:36,451 | INFO     | sum of deviations: 1782148727734.332
[2025-10-11 22:28:47] 2025-10-12 02:27:36,452 | INFO     | mean x: 1760196251.3090627
[2025-10-11 22:28:47] 2025-10-12 02:27:36,452 | INFO     | mean y: 2143084.4678543764
[2025-10-11 22:28:47] 2025-10-12 02:27:36,452 | INFO     | -- intersect: -4699518174.744042
[2025-10-11 22:28:47] 2025-10-12 02:27:36,452 | INFO     | intersect: -4699518174.744042
[2025-10-11 22:28:47] 2025-10-12 02:27:36,454 | INFO     | chi2: 4.0946456698769955
[2025-10-11 22:28:47] 2025-10-12 02:27:36,454 | INFO     | -- intersect: -4699518174.744042
[2025-10-11 22:28:47] 2025-10-12 02:27:36,454 | INFO     | current memory leak: 2.67 B/s (using 1291 data points, chi2=4.09)
[2025-10-11 22:28:47] 2025-10-12 02:27:36,455 | INFO     | could have reported an average CPU frequency of 2600 MHz (47 samples)
[2025-10-11 22:28:47] 2025-10-12 02:27:36,456 | INFO     | ..............................
[2025-10-11 22:28:47] 2025-10-12 02:27:36,456 | INFO     | . Timing measurements:
[2025-10-11 22:28:47] 2025-10-12 02:27:36,456 | INFO     | . get job = 1 s
[2025-10-11 22:28:47] 2025-10-12 02:27:36,456 | INFO     | . initial setup = 7 s
[2025-10-11 22:28:47] 2025-10-12 02:27:36,456 | INFO     | . payload setup = 64 s
[2025-10-11 22:28:47] 2025-10-12 02:27:36,456 | INFO     | . stage-in = 0 s
[2025-10-11 22:28:47] 2025-10-12 02:27:36,456 | INFO     | . payload execution = 80388 s
[2025-10-11 22:28:47] 2025-10-12 02:27:36,456 | INFO     | . stage-out = 9 s
[2025-10-11 22:28:47] 2025-10-12 02:27:36,456 | INFO     | . log creation = 1 s
[2025-10-11 22:28:47] 2025-10-12 02:27:36,456 | INFO     | ..............................
[2025-10-11 22:28:47] 2025-10-12 02:27:36,569 | INFO     | 
[2025-10-11 22:28:47] 2025-10-12 02:27:36,569 | INFO     | job summary report
[2025-10-11 22:28:47] 2025-10-12 02:27:36,569 | INFO     | --------------------------------------------------
[2025-10-11 22:28:47] 2025-10-12 02:27:36,570 | INFO     | PanDA job id: 6837873638
[2025-10-11 22:28:47] 2025-10-12 02:27:36,570 | INFO     | task id: 46676269
[2025-10-11 22:28:47] 2025-10-12 02:27:36,570 | INFO     | errors: (none)
[2025-10-11 22:28:47] 2025-10-12 02:27:36,570 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:28:47] 2025-10-12 02:27:36,570 | INFO     | pilot state: finished 
[2025-10-11 22:28:47] 2025-10-12 02:27:36,570 | INFO     | transexitcode: 0
[2025-10-11 22:28:47] 2025-10-12 02:27:36,570 | INFO     | exeerrorcode: 0
[2025-10-11 22:28:47] 2025-10-12 02:27:36,570 | INFO     | exeerrordiag: 
[2025-10-11 22:28:47] 2025-10-12 02:27:36,571 | INFO     | exitcode: 0
[2025-10-11 22:28:47] 2025-10-12 02:27:36,571 | INFO     | exitmsg: OK
[2025-10-11 22:28:47] 2025-10-12 02:27:36,571 | INFO     | cpuconsumptiontime: 51491 s
[2025-10-11 22:28:47] 2025-10-12 02:27:36,571 | INFO     | nevents: 400
[2025-10-11 22:28:47] 2025-10-12 02:27:36,571 | INFO     | neventsw: 0
[2025-10-11 22:28:47] 2025-10-12 02:27:36,571 | INFO     | pid: 4174141
[2025-10-11 22:28:47] 2025-10-12 02:27:36,571 | INFO     | pgrp: 4174141
[2025-10-11 22:28:47] 2025-10-12 02:27:36,571 | INFO     | corecount: 9
[2025-10-11 22:28:47] 2025-10-12 02:27:36,571 | INFO     | event service: False
[2025-10-11 22:28:47] 2025-10-12 02:27:36,572 | INFO     | sizes: {0: 2348029, 1: 2348714, 4: 2348742, 5: 2348941, 6: 2348969, 17: 2348997, 28: 2349153, 39: 2349181, 49: 2349471, 50: 2349499, 80457: 2409989, 80467: 2419043
[2025-10-11 22:28:47] 2025-10-12 02:27:36,572 | INFO     | --------------------------------------------------
[2025-10-11 22:28:47] 2025-10-12 02:27:36,572 | INFO     | 
[2025-10-11 22:28:47] 2025-10-12 02:27:36,572 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 22:28:47] 2025-10-12 02:27:36,626 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,626 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,627 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,627 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,628 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:28:47] 2025-10-12 02:27:36,628 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,629 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:28:47] 2025-10-12 02:27:36,629 | INFO     | job 6837873638 has completed (purged errors)
[2025-10-11 22:28:47] 2025-10-12 02:27:36,629 | INFO     | overall cleanup function is called
[2025-10-11 22:28:47] 2025-10-12 02:27:37,684 | INFO     | --- collectZombieJob: --- 10, [4174141]
[2025-10-11 22:28:47] 2025-10-12 02:27:37,685 | INFO     | zombie collector waiting for pid 4174141
[2025-10-11 22:28:47] 2025-10-12 02:27:37,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:28:47] 2025-10-12 02:27:37,685 | INFO     | collected zombie processes
[2025-10-11 22:28:47] 2025-10-12 02:27:37,685 | INFO     | will attempt to kill all subprocesses of pid=4174141
[2025-10-11 22:28:47] 2025-10-12 02:27:38,626 | INFO     | PID=4155106 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:28:47] 2025-10-12 02:27:38,626 | INFO     | .. there are 42 such processes running
[2025-10-11 22:28:47] 2025-10-12 02:27:39,013 | INFO     | process IDs to be killed: [4174141] (in reverse order)
[2025-10-11 22:28:47] 2025-10-12 02:27:39,377 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:28:47] 2025-10-12 02:27:39,378 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:28:47] 2025-10-12 02:27:39,408 | INFO     | did not find any defunct processes belonging to 4174141
[2025-10-11 22:28:47] 2025-10-12 02:27:39,465 | INFO     | did not find any defunct processes belonging to 4174141
[2025-10-11 22:28:47] 2025-10-12 02:27:39,466 | INFO     | ready for new job
[2025-10-11 22:28:47] 2025-10-12 02:27:39,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:28:47] 2025-10-12 02:27:39,477 | INFO     | ***************************************
[2025-10-11 22:28:47] 2025-10-12 02:27:39,478 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:28:47] 2025-10-12 02:27:39,478 | INFO     | ***************************************
[2025-10-11 22:28:47] 2025-10-12 02:27:39,478 | INFO     | 
[2025-10-11 22:28:47] 2025-10-12 02:27:39,497 | INFO     | architecture information:
[2025-10-11 22:28:47] 2025-10-12 02:27:39,501 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:28:47] 2025-10-12 02:27:39,544 | INFO     | cat /etc/os-release:
[2025-10-11 22:28:47] NAME="CentOS Linux"
[2025-10-11 22:28:47] VERSION="7 (Core)"
[2025-10-11 22:28:47] ID="centos"
[2025-10-11 22:28:47] ID_LIKE="rhel fedora"
[2025-10-11 22:28:47] VERSION_ID="7"
[2025-10-11 22:28:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:28:47] ANSI_COLOR="0;31"
[2025-10-11 22:28:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:28:47] HOME_URL="https://www.centos.org/"
[2025-10-11 22:28:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:28:47] 
[2025-10-11 22:28:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:28:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:28:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:28:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:28:47] 
[2025-10-11 22:28:47] 2025-10-12 02:27:39,544 | INFO     | ***************************************
[2025-10-11 22:28:47] 2025-10-12 02:27:40,048 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 22:28:47] 2025-10-12 02:27:40,167 | INFO     | sufficient remaining disk space (75630641152 B)
[2025-10-11 22:28:47] 2025-10-12 02:27:40,168 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:28:47] 2025-10-12 02:27:40,168 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:28:47] 2025-10-12 02:27:40,168 | INFO     | update_server=False
[2025-10-11 22:28:47] 2025-10-12 02:27:40,168 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:28:47] 2025-10-12 02:27:40,168 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:28:47] 2025-10-12 02:27:40,169 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:28:47] 2025-10-12 02:27:40,482 | INFO     | all payload control threads have been joined
[2025-10-11 22:28:47] 2025-10-12 02:27:40,578 | INFO     | all data control threads have been joined
[2025-10-11 22:28:47] 2025-10-12 02:27:41,028 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:28:47] 2025-10-12 02:27:41,028 | INFO     | aborting loop
[2025-10-11 22:28:47] 2025-10-12 02:27:41,193 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:41,195 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:41,226 | INFO     | [job] validate thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:41,343 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:41,390 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:41,447 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:41,488 | INFO     | [payload] control thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:41,587 | INFO     | [data] control thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:41,602 | INFO     | all job control threads have been joined
[2025-10-11 22:28:47] 2025-10-12 02:27:41,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:28:47] 2025-10-12 02:27:41,734 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:41,917 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:42,034 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:42,176 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:42,529 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:42,608 | INFO     | [job] control thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:42,620 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:27:44,183 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:28:47] 2025-10-12 02:28:11,610 | INFO     | PID=4155106 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:28:47] 2025-10-12 02:28:11,610 | INFO     | .. there are 41 such processes running
[2025-10-11 22:28:47] 2025-10-12 02:28:11,611 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:28:47] 2025-10-12 02:28:11,611 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:28:47] 2025-10-12 02:28:11,611 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:28:47] 2025-10-12 02:28:39,283 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:28:47] 2025-10-12 02:28:40,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140181958719296)>', '<ExcThread(monitor, started 140181441058560)>']
[2025-10-11 22:28:47] 2025-10-12 02:28:40,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:28:47] 2025-10-12 02:28:40,805 | INFO     | [monitor] control thread has ended
[2025-10-11 22:28:47] 2025-10-12 02:28:45,358 | INFO     | all workflow threads have been joined
[2025-10-11 22:28:47] 2025-10-12 02:28:45,358 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:28:47] 2025-10-12 02:28:45,358 | INFO     | traces error code: 0
[2025-10-11 22:28:47] 2025-10-12 02:28:45,359 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:28:47] 2025-10-12 02:28:45,722 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:28:47] 2025-10-12 02:28:45,725 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:28:47] 2025-10-12 02:28:45,742 [wrapper] pilotpid: 4155106
[2025-10-11 22:28:47] 2025-10-12 02:28:45,762 [wrapper] Pilot exit status: 0
[2025-10-11 22:28:47] 2025-10-12 02:28:45,919 [wrapper] pandaids: 6837873638
[2025-10-11 22:28:47] 2025-10-12 02:28:46,184 [wrapper] cleanup supervisor_pilot 4031633 4155107
[2025-10-11 22:28:47] 2025-10-12 02:28:46,188 [wrapper] Test setup, not cleaning
[2025-10-11 22:28:47] 2025-10-12 02:28:46,192 [wrapper] apfmon messages muted
[2025-10-11 22:28:47] 2025-10-12 02:28:46,194 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:28:47] 2025-10-12 02:28:46,197 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:28:47]  *** Error codes and diagnostics ***
[2025-10-11 22:28:47]     "exeErrorCode": 0,
[2025-10-11 22:28:47]     "exeErrorDiag": "",
[2025-10-11 22:28:47]     "pilotErrorCode": 0,
[2025-10-11 22:28:47]     "pilotErrorDiag": "",
[2025-10-11 22:28:47]  *** Listing of results directory ***
[2025-10-11 22:28:47] total 435756
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 18:56 pilot3.tar.gz
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 18:58 queuedata.json
[2025-10-11 22:28:47] -rwx------. 1 boincer umatlas     36292 Oct 10 18:59 runpilot2-wrapper.sh
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:28:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:02 run_atlas
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:02 job.xml
[2025-10-11 22:28:47] -rw-r--r--. 2 boincer umatlas 222177947 Oct 11 00:02 EVNT.46676267._001878.pool.root.1
[2025-10-11 22:28:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 22:28:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:02 shared
[2025-10-11 22:28:47] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 00:02 input.tar.gz
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:02 boinc_lockfile
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:02 pandaJob.out
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas    975509 Oct 11 00:04 agis_schedconf.cvmfs.json
[2025-10-11 22:28:47] drwx------. 5 boincer umatlas      4096 Oct 11 00:04 pilot3
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas      6658 Oct 11 22:22 init_data.xml
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas 198009326 Oct 11 22:25 HITS.46676269._046490.pool.root.1
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas       530 Oct 11 22:25 boinc_task_state.xml
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas      1054 Oct 11 22:26 memory_monitor_summary.json
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas   1560580 Oct 11 22:27 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas   1298931 Oct 11 22:27 log.46676269._046490.job.log.tgz.1
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas      7847 Oct 11 22:27 heartbeat.json
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas        95 Oct 11 22:28 pilot_heartbeat.json
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 22:28 boinc_mmap_file
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas        27 Oct 11 22:28 wrapper_checkpoint.txt
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas      4824 Oct 11 22:28 pilotlog.txt
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas   9756707 Oct 11 22:28 log.46676269._046490.job.log.1
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas       357 Oct 11 22:28 output.list
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas       620 Oct 11 22:28 runtime_log
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas  11079680 Oct 11 22:28 result.tar.gz
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas      8694 Oct 11 22:28 runtime_log.err
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas       661 Oct 11 22:28 iSAMDmEGbR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmdeNDmcgSnGo.diag
[2025-10-11 22:28:47] -rw-r--r--. 1 boincer umatlas     21313 Oct 11 22:28 stderr.txt
[2025-10-11 22:28:47] HITS file was successfully produced:
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas 198009326 Oct 11 22:25 shared/HITS.pool.root.1
[2025-10-11 22:28:47]  *** Contents of shared directory: ***
[2025-10-11 22:28:47] total 421748
[2025-10-11 22:28:47] -rw-r--r--. 2 boincer umatlas 222177947 Oct 11 00:02 ATLAS.root_0
[2025-10-11 22:28:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 22:28:47] -rw-r--r--. 2 boincer umatlas    569682 Oct 11 00:02 input.tar.gz
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas 198009326 Oct 11 22:25 HITS.pool.root.1
[2025-10-11 22:28:47] -rw-------. 1 boincer umatlas  11079680 Oct 11 22:28 result.tar.gz
22:28:48 (4143737): run_atlas exited; CPU time 55510.860678
22:28:48 (4143737): called boinc_finish(0)

</stderr_txt>
]]>

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