Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:28:56 (4070639): wrapper (7.7.26015): starting
22:28:56 (4070639): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 22:28:56] Arguments: --nthreads 12
[2025-10-11 22:28:56] Threads: 12
[2025-10-11 22:28:56] Checking for CVMFS
[2025-10-11 22:28:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 22:28:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 22:28:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 22:28:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 22:28:58] 2.13.2.0 981271 128663 267584 151604 3 144 31418750 32935936 35349 16776704 0 101556351 99.685 80427665 29684 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 22:28:58] CVMFS is ok
[2025-10-11 22:28:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 22:28:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 22:28:58] Further information can be found at the LHC@home message board.
[2025-10-11 22:28:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 22:28:58] Checking for apptainer binary...
[2025-10-11 22:28:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 22:28:58] Running /usr/bin/apptainer --version
[2025-10-11 22:28:59] apptainer version 1.4.3-1.el9
[2025-10-11 22:28:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 22:29:00] c-4-36.aglt2.org
[2025-10-11 22:29:00] apptainer works
[2025-10-11 22:29:00] Set ATHENA_PROC_NUMBER=12
[2025-10-11 22:29:00] Set ATHENA_CORE_NUMBER=12
[2025-10-11 22:29:00] Starting ATLAS job with PandaID=6837873642
[2025-10-11 22:29:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:51:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:51:10] 2025-10-12 20:50:02,467 | INFO     | mean y: 2530644.6270871987
[2025-10-12 16:51:10] 2025-10-12 20:50:02,467 | INFO     | -- intersect: 5197165761.6557455
[2025-10-12 16:51:10] 2025-10-12 20:50:02,467 | INFO     | intersect: 5197165761.6557455
[2025-10-12 16:51:10] 2025-10-12 20:50:02,468 | INFO     | chi2: 5.788286135302657
[2025-10-12 16:51:10] 2025-10-12 20:50:02,470 | INFO     | sum of square deviations: 383058209455.87683
[2025-10-12 16:51:10] 2025-10-12 20:50:02,498 | INFO     | sum of deviations: -867716878070.8954
[2025-10-12 16:51:10] 2025-10-12 20:50:02,499 | INFO     | mean x: 1760269070.5983224
[2025-10-12 16:51:10] 2025-10-12 20:50:02,499 | INFO     | mean y: 2538533.9468779126
[2025-10-12 16:51:10] 2025-10-12 20:50:02,499 | INFO     | -- intersect: 3989961710.8942723
[2025-10-12 16:51:10] 2025-10-12 20:50:02,499 | INFO     | intersect: 3989961710.8942723
[2025-10-12 16:51:10] 2025-10-12 20:50:02,500 | INFO     | chi2: 3.0121460760713954
[2025-10-12 16:51:10] 2025-10-12 20:50:02,500 | INFO     | current chi2=3.0121460760713954 (change=47.961348045661246 %)
[2025-10-12 16:51:10] 2025-10-12 20:50:02,521 | INFO     | sum of square deviations: 377728006762.67676
[2025-10-12 16:51:10] 2025-10-12 20:50:02,583 | INFO     | sum of deviations: -840937912498.5085
[2025-10-12 16:51:10] 2025-10-12 20:50:02,584 | INFO     | mean x: 1760268918.0983145
[2025-10-12 16:51:10] 2025-10-12 20:50:02,584 | INFO     | mean y: 2539300.6619850188
[2025-10-12 16:51:10] 2025-10-12 20:50:02,584 | INFO     | -- intersect: 3921435551.189815
[2025-10-12 16:51:10] 2025-10-12 20:50:02,584 | INFO     | intersect: 3921435551.189815
[2025-10-12 16:51:10] 2025-10-12 20:50:02,586 | INFO     | chi2: 3.0046864854493807
[2025-10-12 16:51:10] 2025-10-12 20:50:02,586 | INFO     | current chi2=3.0046864854493807 (change=0.24765036069379268 %)
[2025-10-12 16:51:10] 2025-10-12 20:50:02,586 | INFO     | right removable region: 1067
[2025-10-12 16:51:10] 2025-10-12 20:50:02,588 | INFO     | sum of square deviations: 383057883472.07263
[2025-10-12 16:51:10] 2025-10-12 20:50:02,622 | INFO     | sum of deviations: -1372137597264.3953
[2025-10-12 16:51:10] 2025-10-12 20:50:02,623 | INFO     | mean x: 1760269375.5973904
[2025-10-12 16:51:10] 2025-10-12 20:50:02,623 | INFO     | mean y: 2537036.5731593664
[2025-10-12 16:51:10] 2025-10-12 20:50:02,623 | INFO     | -- intersect: 6307933416.038075
[2025-10-12 16:51:10] 2025-10-12 20:50:02,623 | INFO     | intersect: 6307933416.038075
[2025-10-12 16:51:10] 2025-10-12 20:50:02,625 | INFO     | chi2: 3.7746764884626924
[2025-10-12 16:51:10] 2025-10-12 20:50:02,625 | INFO     | current chi2=3.7746764884626924 (change=34.78766598214615 %)
[2025-10-12 16:51:10] 2025-10-12 20:50:02,626 | INFO     | sum of square deviations: 377727550909.4794
[2025-10-12 16:51:10] 2025-10-12 20:50:02,773 | INFO     | sum of deviations: -1389665564998.04
[2025-10-12 16:51:10] 2025-10-12 20:50:02,774 | INFO     | mean x: 1760269528.099251
[2025-10-12 16:51:10] 2025-10-12 20:50:02,774 | INFO     | mean y: 2537536.698501873
[2025-10-12 16:51:10] 2025-10-12 20:50:02,774 | INFO     | -- intersect: 6478596649.741849
[2025-10-12 16:51:10] 2025-10-12 20:50:02,774 | INFO     | intersect: 6478596649.741849
[2025-10-12 16:51:10] 2025-10-12 20:50:02,811 | INFO     | chi2: 3.7307199380313456
[2025-10-12 16:51:10] 2025-10-12 20:50:02,811 | INFO     | current chi2=3.7307199380313456 (change=1.1645117287719922 %)
[2025-10-12 16:51:10] 2025-10-12 20:50:02,811 | INFO     | left removable region: 20
[2025-10-12 16:51:10] 2025-10-12 20:50:02,813 | INFO     | sum of square deviations: 355880743285.3198
[2025-10-12 16:51:10] 2025-10-12 20:50:02,868 | INFO     | monitor loop #2496: job 0:6837873642 is in state 'finished'
[2025-10-12 16:51:10] 2025-10-12 20:50:02,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 16:51:10] 2025-10-12 20:50:03,367 | INFO     | time since job start (65983s) is within the limit (172800.0s)
[2025-10-12 16:51:10] 2025-10-12 20:50:03,438 | INFO     | sum of deviations: -985360414512.7719
[2025-10-12 16:51:10] 2025-10-12 20:50:03,438 | INFO     | mean x: 1760269497.599809
[2025-10-12 16:51:10] 2025-10-12 20:50:03,438 | INFO     | mean y: 2544006.146131805
[2025-10-12 16:51:10] 2025-10-12 20:50:03,438 | INFO     | -- intersect: 4876367371.234863
[2025-10-12 16:51:10] 2025-10-12 20:50:03,438 | INFO     | intersect: 4876367371.234863
[2025-10-12 16:51:10] 2025-10-12 20:50:03,440 | INFO     | chi2: 0.834269773421328
[2025-10-12 16:51:10] 2025-10-12 20:50:03,440 | INFO     | -- intersect: 4876367371.234863
[2025-10-12 16:51:10] 2025-10-12 20:50:03,440 | INFO     | current memory leak: -2.77 B/s (using 1047 data points, chi2=0.83)
[2025-10-12 16:51:10] 2025-10-12 20:50:03,442 | INFO     | could have reported an average CPU frequency of 2600 MHz (39 samples)
[2025-10-12 16:51:10] 2025-10-12 20:50:03,442 | INFO     | ..............................
[2025-10-12 16:51:10] 2025-10-12 20:50:03,442 | INFO     | . Timing measurements:
[2025-10-12 16:51:10] 2025-10-12 20:50:03,442 | INFO     | . get job = 0 s
[2025-10-12 16:51:10] 2025-10-12 20:50:03,442 | INFO     | . initial setup = 8 s
[2025-10-12 16:51:10] 2025-10-12 20:50:03,442 | INFO     | . payload setup = 42 s
[2025-10-12 16:51:10] 2025-10-12 20:50:03,442 | INFO     | . stage-in = 0 s
[2025-10-12 16:51:10] 2025-10-12 20:50:03,447 | INFO     | . payload execution = 65770 s
[2025-10-12 16:51:10] 2025-10-12 20:50:03,447 | INFO     | . stage-out = 16 s
[2025-10-12 16:51:10] 2025-10-12 20:50:03,447 | INFO     | . log creation = 4 s
[2025-10-12 16:51:10] 2025-10-12 20:50:03,447 | INFO     | ..............................
[2025-10-12 16:51:10] 2025-10-12 20:50:04,361 | INFO     | 
[2025-10-12 16:51:10] 2025-10-12 20:50:04,362 | INFO     | job summary report
[2025-10-12 16:51:10] 2025-10-12 20:50:04,362 | INFO     | --------------------------------------------------
[2025-10-12 16:51:10] 2025-10-12 20:50:04,362 | INFO     | PanDA job id: 6837873642
[2025-10-12 16:51:10] 2025-10-12 20:50:04,362 | INFO     | task id: 46676269
[2025-10-12 16:51:10] 2025-10-12 20:50:04,362 | INFO     | errors: (none)
[2025-10-12 16:51:10] 2025-10-12 20:50:04,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:51:10] 2025-10-12 20:50:04,362 | INFO     | pilot state: finished 
[2025-10-12 16:51:10] 2025-10-12 20:50:04,362 | INFO     | transexitcode: 0
[2025-10-12 16:51:10] 2025-10-12 20:50:04,362 | INFO     | exeerrorcode: 0
[2025-10-12 16:51:10] 2025-10-12 20:50:04,363 | INFO     | exeerrordiag: 
[2025-10-12 16:51:10] 2025-10-12 20:50:04,363 | INFO     | exitcode: 0
[2025-10-12 16:51:10] 2025-10-12 20:50:04,363 | INFO     | exitmsg: OK
[2025-10-12 16:51:10] 2025-10-12 20:50:04,363 | INFO     | cpuconsumptiontime: 49884 s
[2025-10-12 16:51:10] 2025-10-12 20:50:04,363 | INFO     | nevents: 400
[2025-10-12 16:51:10] 2025-10-12 20:50:04,363 | INFO     | neventsw: 0
[2025-10-12 16:51:10] 2025-10-12 20:50:04,363 | INFO     | pid: 4088025
[2025-10-12 16:51:10] 2025-10-12 20:50:04,363 | INFO     | pgrp: 4088025
[2025-10-12 16:51:10] 2025-10-12 20:50:04,363 | INFO     | corecount: 12
[2025-10-12 16:51:10] 2025-10-12 20:50:04,363 | INFO     | event service: False
[2025-10-12 16:51:10] 2025-10-12 20:50:04,364 | INFO     | sizes: {0: 2348630, 1: 2348771, 2: 2348885, 13: 2348913, 24: 2348969, 35: 2348997, 37: 2349415, 46: 2349443, 65818: 2400336, 65820: 2400335, 65837: 2409389, 65839:
[2025-10-12 16:51:10] 2025-10-12 20:50:04,364 | INFO     | --------------------------------------------------
[2025-10-12 16:51:10] 2025-10-12 20:50:04,364 | INFO     | 
[2025-10-12 16:51:10] 2025-10-12 20:50:04,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:51:10] 2025-10-12 20:50:04,454 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,455 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,455 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,455 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,455 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,456 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,456 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,456 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,456 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,456 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,456 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:51:10] 2025-10-12 20:50:04,456 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,456 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:51:10] 2025-10-12 20:50:04,457 | INFO     | job 6837873642 has completed (purged errors)
[2025-10-12 16:51:10] 2025-10-12 20:50:04,457 | INFO     | overall cleanup function is called
[2025-10-12 16:51:10] 2025-10-12 20:50:05,509 | INFO     | --- collectZombieJob: --- 10, [4088025]
[2025-10-12 16:51:10] 2025-10-12 20:50:05,510 | INFO     | zombie collector waiting for pid 4088025
[2025-10-12 16:51:10] 2025-10-12 20:50:05,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:51:10] 2025-10-12 20:50:05,511 | INFO     | collected zombie processes
[2025-10-12 16:51:10] 2025-10-12 20:50:05,511 | INFO     | will attempt to kill all subprocesses of pid=4088025
[2025-10-12 16:51:10] 2025-10-12 20:50:08,689 | INFO     | PID=4076241 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:51:10] 2025-10-12 20:50:08,689 | INFO     | .. there are 29 such processes running
[2025-10-12 16:51:10] 2025-10-12 20:50:09,347 | INFO     | process IDs to be killed: [4088025] (in reverse order)
[2025-10-12 16:51:10] 2025-10-12 20:50:09,789 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:51:10] 2025-10-12 20:50:09,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:51:10] 2025-10-12 20:50:09,909 | INFO     | did not find any defunct processes belonging to 4088025
[2025-10-12 16:51:10] 2025-10-12 20:50:09,957 | INFO     | did not find any defunct processes belonging to 4088025
[2025-10-12 16:51:10] 2025-10-12 20:50:09,965 | INFO     | ready for new job
[2025-10-12 16:51:10] 2025-10-12 20:50:09,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:51:10] 2025-10-12 20:50:09,977 | INFO     | ***************************************
[2025-10-12 16:51:10] 2025-10-12 20:50:09,978 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:51:10] 2025-10-12 20:50:09,978 | INFO     | ***************************************
[2025-10-12 16:51:10] 2025-10-12 20:50:09,978 | INFO     | 
[2025-10-12 16:51:10] 2025-10-12 20:50:09,998 | INFO     | architecture information:
[2025-10-12 16:51:10] 2025-10-12 20:50:10,001 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:51:10] 2025-10-12 20:50:10,169 | INFO     | cat /etc/os-release:
[2025-10-12 16:51:10] NAME="CentOS Linux"
[2025-10-12 16:51:10] VERSION="7 (Core)"
[2025-10-12 16:51:10] ID="centos"
[2025-10-12 16:51:10] ID_LIKE="rhel fedora"
[2025-10-12 16:51:10] VERSION_ID="7"
[2025-10-12 16:51:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:51:10] ANSI_COLOR="0;31"
[2025-10-12 16:51:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:51:10] HOME_URL="https://www.centos.org/"
[2025-10-12 16:51:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:51:10] 
[2025-10-12 16:51:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:51:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:51:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:51:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:51:10] 
[2025-10-12 16:51:10] 2025-10-12 20:50:10,169 | INFO     | ***************************************
[2025-10-12 16:51:10] 2025-10-12 20:50:10,675 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:51:10] 2025-10-12 20:50:10,802 | INFO     | sufficient remaining disk space (74547462144 B)
[2025-10-12 16:51:10] 2025-10-12 20:50:10,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:51:10] 2025-10-12 20:50:10,803 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:51:10] 2025-10-12 20:50:10,803 | INFO     | update_server=False
[2025-10-12 16:51:10] 2025-10-12 20:50:10,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:51:10] 2025-10-12 20:50:10,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:51:10] 2025-10-12 20:50:10,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:51:10] 2025-10-12 20:50:10,948 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 16:51:10] 2025-10-12 20:50:10,948 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 16:51:10] 2025-10-12 20:50:10,948 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:51:10] 2025-10-12 20:50:10,948 | INFO     | will abort loop
[2025-10-12 16:51:10] 2025-10-12 20:50:11,026 | INFO     | all data control threads have been joined
[2025-10-12 16:51:10] 2025-10-12 20:50:11,341 | INFO     | all job control threads have been joined
[2025-10-12 16:51:10] 2025-10-12 20:50:11,348 | INFO     | all payload control threads have been joined
[2025-10-12 16:51:10] 2025-10-12 20:50:11,809 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:11,897 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:11,955 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:11,966 | INFO     | [job] validate thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:11,998 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:12,032 | INFO     | [data] control thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:12,233 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:12,347 | INFO     | [job] control thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:12,363 | INFO     | [payload] control thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:12,851 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:12,960 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:12,970 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:13,243 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:13,307 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:13,636 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:51:10] 2025-10-12 20:50:14,642 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:14,842 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:51:10] 2025-10-12 20:50:42,518 | INFO     | PID=4076241 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:51:10] 2025-10-12 20:50:42,518 | INFO     | .. there are 30 such processes running
[2025-10-12 16:51:10] 2025-10-12 20:50:42,518 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:51:10] 2025-10-12 20:50:42,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:51:10] 2025-10-12 20:50:42,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:51:10] 2025-10-12 20:51:02,247 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:51:10] 2025-10-12 20:51:02,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140664276121408)>', '<ExcThread(monitor, started 140663769249536)>']
[2025-10-12 16:51:10] 2025-10-12 20:51:02,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:51:10] 2025-10-12 20:51:02,779 | INFO     | [monitor] control thread has ended
[2025-10-12 16:51:10] 2025-10-12 20:51:07,539 | INFO     | all workflow threads have been joined
[2025-10-12 16:51:10] 2025-10-12 20:51:07,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:51:10] 2025-10-12 20:51:07,539 | INFO     | traces error code: 0
[2025-10-12 16:51:10] 2025-10-12 20:51:07,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:51:10] 2025-10-12 20:51:08,880 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:51:10] 2025-10-12 20:51:08,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:51:10] 2025-10-12 20:51:09,028 [wrapper] pilotpid: 4076241
[2025-10-12 16:51:10] 2025-10-12 20:51:09,058 [wrapper] Pilot exit status: 0
[2025-10-12 16:51:10] 2025-10-12 20:51:09,181 [wrapper] pandaids: 6837873642
[2025-10-12 16:51:10] 2025-10-12 20:51:09,304 [wrapper] cleanup supervisor_pilot 3544786 4076242
[2025-10-12 16:51:10] 2025-10-12 20:51:09,308 [wrapper] Test setup, not cleaning
[2025-10-12 16:51:10] 2025-10-12 20:51:09,349 [wrapper] apfmon messages muted
[2025-10-12 16:51:10] 2025-10-12 20:51:09,398 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:51:10] 2025-10-12 20:51:09,416 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:51:10]  *** Error codes and diagnostics ***
[2025-10-12 16:51:10]     "exeErrorCode": 0,
[2025-10-12 16:51:10]     "exeErrorDiag": "",
[2025-10-12 16:51:10]     "pilotErrorCode": 0,
[2025-10-12 16:51:10]     "pilotErrorDiag": "",
[2025-10-12 16:51:10]  *** Listing of results directory ***
[2025-10-12 16:51:10] total 420824
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 18:56 pilot3.tar.gz
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 18:58 queuedata.json
[2025-10-12 16:51:10] -rwx------. 1 boincer umatlas     36292 Oct 10 18:59 runpilot2-wrapper.sh
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas       100 Oct 11 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:51:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 22:28 run_atlas
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas       105 Oct 11 22:28 job.xml
[2025-10-12 16:51:10] -rw-r--r--. 2 boincer umatlas 222177947 Oct 11 22:28 EVNT.46676267._001878.pool.root.1
[2025-10-12 16:51:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 22:28 shared
[2025-10-12 16:51:10] -rw-r--r--. 2 boincer umatlas    569685 Oct 11 22:28 input.tar.gz
[2025-10-12 16:51:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:28 start_atlas.sh
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas         0 Oct 11 22:28 boinc_lockfile
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 22:29 pandaJob.out
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas    975496 Oct 11 22:30 agis_schedconf.cvmfs.json
[2025-10-12 16:51:10] drwx------. 5 boincer umatlas      4096 Oct 11 22:30 pilot3
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas 190774452 Oct 12 16:43 HITS.46676269._046494.pool.root.1
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas       531 Oct 12 16:44 boinc_task_state.xml
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas      6659 Oct 12 16:46 init_data.xml
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas      1055 Oct 12 16:48 memory_monitor_summary.json
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:48 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas   1006726 Oct 12 16:48 log.46676269._046494.job.log.tgz.1
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas        95 Oct 12 16:49 pilot_heartbeat.json
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas      7853 Oct 12 16:50 heartbeat.json
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas      5010 Oct 12 16:51 pilotlog.txt
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:51 boinc_mmap_file
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:51 wrapper_checkpoint.txt
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas   6038848 Oct 12 16:51 log.46676269._046494.job.log.1
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas       357 Oct 12 16:51 output.list
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:51 runtime_log
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas   7065600 Oct 12 16:51 result.tar.gz
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas       659 Oct 12 16:51 xgFMDmEGbR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqdeNDmuuXu5n.diag
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas      8696 Oct 12 16:51 runtime_log.err
[2025-10-12 16:51:10] -rw-r--r--. 1 boincer umatlas      2148 Oct 12 16:51 stderr.txt
[2025-10-12 16:51:10] HITS file was successfully produced:
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas 190774452 Oct 12 16:43 shared/HITS.pool.root.1
[2025-10-12 16:51:10]  *** Contents of shared directory: ***
[2025-10-12 16:51:10] total 410756
[2025-10-12 16:51:10] -rw-r--r--. 2 boincer umatlas 222177947 Oct 11 22:28 ATLAS.root_0
[2025-10-12 16:51:10] -rw-r--r--. 2 boincer umatlas    569685 Oct 11 22:28 input.tar.gz
[2025-10-12 16:51:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 22:28 start_atlas.sh
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas 190774452 Oct 12 16:43 HITS.pool.root.1
[2025-10-12 16:51:10] -rw-------. 1 boincer umatlas   7065600 Oct 12 16:51 result.tar.gz
16:51:12 (4070639): run_atlas exited; CPU time 52119.675435
16:51:12 (4070639): called boinc_finish(0)

</stderr_txt>
]]>

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