Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:52:18 (956674): wrapper (7.7.26015): starting
03:52:18 (956674): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 03:52:18] Arguments: --nthreads 8
[2025-10-11 03:52:18] Threads: 8
[2025-10-11 03:52:18] Checking for CVMFS
[2025-10-11 03:52:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 03:52:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 03:52:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 03:52:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 03:52:41] 2.13.2.0 148585 115857 147700 151576 0 65 23665960 39288832 9001 16776704 0 59434558 99.730 41768813 35307 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 03:52:41] CVMFS is ok
[2025-10-11 03:52:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 03:52:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 03:52:41] Further information can be found at the LHC@home message board.
[2025-10-11 03:52:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 03:52:41] Checking for apptainer binary...
[2025-10-11 03:52:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 03:52:41] Running /usr/bin/apptainer --version
[2025-10-11 03:52:43] apptainer version 1.4.3-1.el9
[2025-10-11 03:52:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 03:52:44] c-210-12.aglt2.org
[2025-10-11 03:52:44] apptainer works
[2025-10-11 03:52:44] Set ATHENA_PROC_NUMBER=8
[2025-10-11 03:52:44] Set ATHENA_CORE_NUMBER=8
[2025-10-11 03:52:44] Starting ATLAS job with PandaID=6837829367
[2025-10-11 03:52:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:04:28]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:04:28] 2025-10-11 17:03:20,386 | INFO     | time since job start (33000s) is within the limit (172800.0s)
[2025-10-11 13:04:28] 2025-10-11 17:03:20,887 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 13:04:28] 2025-10-11 17:03:20,894 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.156625
[2025-10-11 13:04:28] 2025-10-11 17:03:20,900 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6837829367/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:04:28] 2025-10-11 17:03:20,901 | INFO     | extracted standard info from prmon json
[2025-10-11 13:04:28] 2025-10-11 17:03:20,901 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:04:28] 2025-10-11 17:03:20,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:04:28] 2025-10-11 17:03:20,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:04:28] 2025-10-11 17:03:20,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:04:28] 2025-10-11 17:03:20,936 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:04:28] 2025-10-11 17:03:20,937 | INFO     | sum of square deviations: 48825607086.33155
[2025-10-11 13:04:28] 2025-10-11 17:03:20,946 | INFO     | sum of deviations: 195790949047.4534
[2025-10-11 13:04:28] 2025-10-11 17:03:20,946 | INFO     | mean x: 1760185715.6648147
[2025-10-11 13:04:28] 2025-10-11 17:03:20,946 | INFO     | mean y: 2501586.787037037
[2025-10-11 13:04:28] 2025-10-11 17:03:20,946 | INFO     | -- intersect: -7055852673.108316
[2025-10-11 13:04:28] 2025-10-11 17:03:20,947 | INFO     | intersect: -7055852673.108316
[2025-10-11 13:04:28] 2025-10-11 17:03:20,948 | INFO     | chi2: 3.112570396585615
[2025-10-11 13:04:28] 2025-10-11 17:03:20,949 | INFO     | sum of square deviations: 47481884078.86037
[2025-10-11 13:04:28] 2025-10-11 17:03:20,958 | INFO     | sum of deviations: 227502440893.7476
[2025-10-11 13:04:28] 2025-10-11 17:03:20,958 | INFO     | mean x: 1760185563.1682243
[2025-10-11 13:04:28] 2025-10-11 17:03:20,959 | INFO     | mean y: 2505156.7028037384
[2025-10-11 13:04:28] 2025-10-11 17:03:20,959 | INFO     | -- intersect: -8431164227.216851
[2025-10-11 13:04:28] 2025-10-11 17:03:20,959 | INFO     | intersect: -8431164227.216851
[2025-10-11 13:04:28] 2025-10-11 17:03:20,960 | INFO     | chi2: 2.4261099034868985
[2025-10-11 13:04:28] 2025-10-11 17:03:20,960 | INFO     | current chi2=2.4261099034868985 (change=22.0544567876036 %)
[2025-10-11 13:04:28] 2025-10-11 17:03:20,960 | INFO     | right removable region: 534
[2025-10-11 13:04:28] 2025-10-11 17:03:20,961 | INFO     | sum of square deviations: 47481730233.52103
[2025-10-11 13:04:28] 2025-10-11 17:03:20,970 | INFO     | sum of deviations: 77103402225.50072
[2025-10-11 13:04:28] 2025-10-11 17:03:20,970 | INFO     | mean x: 1760185868.1700935
[2025-10-11 13:04:28] 2025-10-11 17:03:20,971 | INFO     | mean y: 2515024.181308411
[2025-10-11 13:04:28] 2025-10-11 17:03:20,971 | INFO     | -- intersect: -2855770011.2984695
[2025-10-11 13:04:28] 2025-10-11 17:03:20,971 | INFO     | intersect: -2855770011.2984695
[2025-10-11 13:04:28] 2025-10-11 17:03:20,972 | INFO     | chi2: 1.1062418652086556
[2025-10-11 13:04:28] 2025-10-11 17:03:20,972 | INFO     | current chi2=1.1062418652086556 (change=64.45889653059203 %)
[2025-10-11 13:04:28] 2025-10-11 17:03:20,973 | INFO     | sum of square deviations: 46162933868.21891
[2025-10-11 13:04:28] 2025-10-11 17:03:20,982 | INFO     | sum of deviations: 48097923752.517044
[2025-10-11 13:04:28] 2025-10-11 17:03:20,982 | INFO     | mean x: 1760186020.664151
[2025-10-11 13:04:28] 2025-10-11 17:03:20,983 | INFO     | mean y: 2518376.6377358492
[2025-10-11 13:04:28] 2025-10-11 17:03:20,983 | INFO     | -- intersect: -1831448529.6649024
[2025-10-11 13:04:28] 2025-10-11 17:03:20,983 | INFO     | intersect: -1831448529.6649024
[2025-10-11 13:04:28] 2025-10-11 17:03:20,984 | INFO     | chi2: 1.0145331749096786
[2025-10-11 13:04:28] 2025-10-11 17:03:20,984 | INFO     | current chi2=1.0145331749096786 (change=8.290112061676421 %)
[2025-10-11 13:04:28] 2025-10-11 17:03:20,984 | INFO     | left removable region: 20
[2025-10-11 13:04:28] 2025-10-11 17:03:20,985 | INFO     | sum of square deviations: 42107141095.735374
[2025-10-11 13:04:28] 2025-10-11 17:03:20,993 | INFO     | sum of deviations: 61986132443.42024
[2025-10-11 13:04:28] 2025-10-11 17:03:20,994 | INFO     | mean x: 1760186142.6575875
[2025-10-11 13:04:28] 2025-10-11 17:03:20,994 | INFO     | mean y: 2524342.661478599
[2025-10-11 13:04:28] 2025-10-11 17:03:20,994 | INFO     | -- intersect: -2588654458.0027304
[2025-10-11 13:04:28] 2025-10-11 17:03:20,994 | INFO     | intersect: -2588654458.0027304
[2025-10-11 13:04:28] 2025-10-11 17:03:20,995 | INFO     | chi2: 0.29253612221198777
[2025-10-11 13:04:28] 2025-10-11 17:03:20,995 | INFO     | -- intersect: -2588654458.0027304
[2025-10-11 13:04:28] 2025-10-11 17:03:20,995 | INFO     | current memory leak: 1.47 B/s (using 514 data points, chi2=0.29)
[2025-10-11 13:04:28] 2025-10-11 17:03:20,997 | INFO     | could have reported an average CPU frequency of 2596 MHz (21 samples)
[2025-10-11 13:04:28] 2025-10-11 17:03:20,997 | INFO     | ..............................
[2025-10-11 13:04:28] 2025-10-11 17:03:20,997 | INFO     | . Timing measurements:
[2025-10-11 13:04:28] 2025-10-11 17:03:20,997 | INFO     | . get job = 0 s
[2025-10-11 13:04:28] 2025-10-11 17:03:20,997 | INFO     | . initial setup = 6 s
[2025-10-11 13:04:28] 2025-10-11 17:03:20,997 | INFO     | . payload setup = 20 s
[2025-10-11 13:04:28] 2025-10-11 17:03:20,998 | INFO     | . stage-in = 0 s
[2025-10-11 13:04:28] 2025-10-11 17:03:20,998 | INFO     | . payload execution = 32924 s
[2025-10-11 13:04:28] 2025-10-11 17:03:20,998 | INFO     | . stage-out = 4 s
[2025-10-11 13:04:28] 2025-10-11 17:03:20,998 | INFO     | . log creation = 1 s
[2025-10-11 13:04:28] 2025-10-11 17:03:20,998 | INFO     | ..............................
[2025-10-11 13:04:28] 2025-10-11 17:03:21,121 | INFO     | 
[2025-10-11 13:04:28] 2025-10-11 17:03:21,121 | INFO     | job summary report
[2025-10-11 13:04:28] 2025-10-11 17:03:21,121 | INFO     | --------------------------------------------------
[2025-10-11 13:04:28] 2025-10-11 17:03:21,121 | INFO     | PanDA job id: 6837829367
[2025-10-11 13:04:28] 2025-10-11 17:03:21,121 | INFO     | task id: 46676269
[2025-10-11 13:04:28] 2025-10-11 17:03:21,122 | INFO     | errors: (none)
[2025-10-11 13:04:28] 2025-10-11 17:03:21,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:04:28] 2025-10-11 17:03:21,122 | INFO     | pilot state: finished 
[2025-10-11 13:04:28] 2025-10-11 17:03:21,122 | INFO     | transexitcode: 0
[2025-10-11 13:04:28] 2025-10-11 17:03:21,122 | INFO     | exeerrorcode: 0
[2025-10-11 13:04:28] 2025-10-11 17:03:21,122 | INFO     | exeerrordiag: 
[2025-10-11 13:04:28] 2025-10-11 17:03:21,122 | INFO     | exitcode: 0
[2025-10-11 13:04:28] 2025-10-11 17:03:21,122 | INFO     | exitmsg: OK
[2025-10-11 13:04:28] 2025-10-11 17:03:21,122 | INFO     | cpuconsumptiontime: 53951 s
[2025-10-11 13:04:28] 2025-10-11 17:03:21,123 | INFO     | nevents: 400
[2025-10-11 13:04:28] 2025-10-11 17:03:21,123 | INFO     | neventsw: 0
[2025-10-11 13:04:28] 2025-10-11 17:03:21,123 | INFO     | pid: 966955
[2025-10-11 13:04:28] 2025-10-11 17:03:21,123 | INFO     | pgrp: 966955
[2025-10-11 13:04:28] 2025-10-11 17:03:21,123 | INFO     | corecount: 8
[2025-10-11 13:04:28] 2025-10-11 17:03:21,123 | INFO     | event service: False
[2025-10-11 13:04:28] 2025-10-11 17:03:21,123 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348913, 3: 2348913, 15: 2348941, 24: 2349231, 25: 2349387, 32948: 2388943, 32949: 2388942, 32953: 2397996, 32955: 2398052, 3296
[2025-10-11 13:04:28] 2025-10-11 17:03:21,123 | INFO     | --------------------------------------------------
[2025-10-11 13:04:28] 2025-10-11 17:03:21,123 | INFO     | 
[2025-10-11 13:04:28] 2025-10-11 17:03:21,124 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 13:04:28] 2025-10-11 17:03:21,149 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,150 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,150 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,150 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,150 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,150 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,150 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,150 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,150 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,151 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:04:28] 2025-10-11 17:03:21,152 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,152 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:04:28] 2025-10-11 17:03:21,152 | INFO     | job 6837829367 has completed (purged errors)
[2025-10-11 13:04:28] 2025-10-11 17:03:21,152 | INFO     | overall cleanup function is called
[2025-10-11 13:04:28] 2025-10-11 17:03:22,168 | INFO     | --- collectZombieJob: --- 10, [966955]
[2025-10-11 13:04:28] 2025-10-11 17:03:22,174 | INFO     | zombie collector waiting for pid 966955
[2025-10-11 13:04:28] 2025-10-11 17:03:22,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:04:28] 2025-10-11 17:03:22,174 | INFO     | collected zombie processes
[2025-10-11 13:04:28] 2025-10-11 17:03:22,174 | INFO     | will attempt to kill all subprocesses of pid=966955
[2025-10-11 13:04:28] 2025-10-11 17:03:22,943 | INFO     | process IDs to be killed: [966955] (in reverse order)
[2025-10-11 13:04:28] 2025-10-11 17:03:23,019 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:04:28] 2025-10-11 17:03:23,019 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:04:28] 2025-10-11 17:03:23,028 | INFO     | did not find any defunct processes belonging to 966955
[2025-10-11 13:04:28] 2025-10-11 17:03:23,037 | INFO     | did not find any defunct processes belonging to 966955
[2025-10-11 13:04:28] 2025-10-11 17:03:23,037 | INFO     | ready for new job
[2025-10-11 13:04:28] 2025-10-11 17:03:23,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:04:28] 2025-10-11 17:03:23,041 | INFO     | ***************************************
[2025-10-11 13:04:28] 2025-10-11 17:03:23,041 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:04:28] 2025-10-11 17:03:23,041 | INFO     | ***************************************
[2025-10-11 13:04:28] 2025-10-11 17:03:23,041 | INFO     | 
[2025-10-11 13:04:28] 2025-10-11 17:03:23,044 | INFO     | architecture information:
[2025-10-11 13:04:28] 2025-10-11 17:03:23,044 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:04:28] 2025-10-11 17:03:23,064 | INFO     | cat /etc/os-release:
[2025-10-11 13:04:28] NAME="CentOS Linux"
[2025-10-11 13:04:28] VERSION="7 (Core)"
[2025-10-11 13:04:28] ID="centos"
[2025-10-11 13:04:28] ID_LIKE="rhel fedora"
[2025-10-11 13:04:28] VERSION_ID="7"
[2025-10-11 13:04:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:04:28] ANSI_COLOR="0;31"
[2025-10-11 13:04:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:04:28] HOME_URL="https://www.centos.org/"
[2025-10-11 13:04:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:04:28] 
[2025-10-11 13:04:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:04:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:04:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:04:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:04:28] 
[2025-10-11 13:04:28] 2025-10-11 17:03:23,065 | INFO     | ***************************************
[2025-10-11 13:04:28] 2025-10-11 17:03:23,568 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 13:04:28] 2025-10-11 17:03:23,688 | INFO     | sufficient remaining disk space (53057945600 B)
[2025-10-11 13:04:28] 2025-10-11 17:03:23,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:04:28] 2025-10-11 17:03:23,689 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:04:28] 2025-10-11 17:03:23,689 | INFO     | update_server=False
[2025-10-11 13:04:28] 2025-10-11 17:03:23,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:04:28] 2025-10-11 17:03:23,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:04:28] 2025-10-11 17:03:23,826 | INFO     | all data control threads have been joined
[2025-10-11 13:04:28] 2025-10-11 17:03:23,999 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 13:04:28] 2025-10-11 17:03:23,999 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 13:04:28] 2025-10-11 17:03:24,000 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:04:28] 2025-10-11 17:03:24,000 | INFO     | will abort loop
[2025-10-11 13:04:28] 2025-10-11 17:03:24,112 | INFO     | all payload control threads have been joined
[2025-10-11 13:04:28] 2025-10-11 17:03:24,138 | INFO     | all job control threads have been joined
[2025-10-11 13:04:28] 2025-10-11 17:03:24,696 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:24,718 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:24,832 | INFO     | [data] control thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:25,006 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:25,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:25,118 | INFO     | [payload] control thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:25,144 | INFO     | [job] control thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:25,152 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:25,401 | INFO     | [job] validate thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:25,714 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:25,892 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:26,148 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:04:28] 2025-10-11 17:03:26,191 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:26,196 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:26,271 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:27,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:04:28] 2025-10-11 17:03:27,163 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:31,060 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:04:28] 2025-10-11 17:03:54,111 | INFO     | PID=960463 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 13:04:28] 2025-10-11 17:03:54,111 | INFO     | .. there are 7 such processes running
[2025-10-11 13:04:28] 2025-10-11 17:03:54,112 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:04:28] 2025-10-11 17:03:54,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:04:28] 2025-10-11 17:03:54,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:04:28] 2025-10-11 17:04:21,143 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:04:28] 2025-10-11 17:04:22,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624001570624)>', '<ExcThread(monitor, started 140623495538432)>']
[2025-10-11 13:04:28] 2025-10-11 17:04:22,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:04:28] 2025-10-11 17:04:22,334 | INFO     | [monitor] control thread has ended
[2025-10-11 13:04:28] 2025-10-11 17:04:27,290 | INFO     | all workflow threads have been joined
[2025-10-11 13:04:28] 2025-10-11 17:04:27,291 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:04:28] 2025-10-11 17:04:27,291 | INFO     | traces error code: 0
[2025-10-11 13:04:28] 2025-10-11 17:04:27,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:04:28] 2025-10-11 17:04:27,790 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:04:28] 2025-10-11 17:04:27,813 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:04:28] 2025-10-11 17:04:27,850 [wrapper] pilotpid: 960463
[2025-10-11 13:04:28] 2025-10-11 17:04:27,887 [wrapper] Pilot exit status: 0
[2025-10-11 13:04:28] 2025-10-11 17:04:28,042 [wrapper] pandaids: 6837829367
[2025-10-11 13:04:28] 2025-10-11 17:04:28,164 [wrapper] cleanup supervisor_pilot 1724728 960464
[2025-10-11 13:04:28] 2025-10-11 17:04:28,169 [wrapper] Test setup, not cleaning
[2025-10-11 13:04:28] 2025-10-11 17:04:28,172 [wrapper] apfmon messages muted
[2025-10-11 13:04:28] 2025-10-11 17:04:28,175 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:04:28] 2025-10-11 17:04:28,179 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:04:28]  *** Error codes and diagnostics ***
[2025-10-11 13:04:28]     "exeErrorCode": 0,
[2025-10-11 13:04:28]     "exeErrorDiag": "",
[2025-10-11 13:04:28]     "pilotErrorCode": 0,
[2025-10-11 13:04:28]     "pilotErrorDiag": "",
[2025-10-11 13:04:28]  *** Listing of results directory ***
[2025-10-11 13:04:28] total 420472
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 17:48 pilot3.tar.gz
[2025-10-11 13:04:28] -rwx------. 1 boincer umatlas     36292 Oct 10 18:30 runpilot2-wrapper.sh
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 18:30 queuedata.json
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas       100 Oct 11 03:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:04:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 03:52 run_atlas
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas       105 Oct 11 03:52 job.xml
[2025-10-11 13:04:28] -rw-r--r--. 2 boincer umatlas 224567452 Oct 11 03:52 EVNT.46676267._001875.pool.root.1
[2025-10-11 13:04:28] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 03:52 shared
[2025-10-11 13:04:28] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 03:52 input.tar.gz
[2025-10-11 13:04:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 03:52 start_atlas.sh
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas         0 Oct 11 03:52 boinc_lockfile
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 03:52 pandaJob.out
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas    975525 Oct 11 03:53 agis_schedconf.cvmfs.json
[2025-10-11 13:04:28] drwx------. 5 boincer umatlas      4096 Oct 11 03:53 pilot3
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas      6661 Oct 11 13:00 init_data.xml
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas 192347918 Oct 11 13:02 HITS.46676269._046390.pool.root.1
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas       531 Oct 11 13:02 boinc_task_state.xml
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas      1056 Oct 11 13:03 memory_monitor_summary.json
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas   1560580 Oct 11 13:03 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas    694428 Oct 11 13:03 log.46676269._046390.job.log.tgz.1
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas      7828 Oct 11 13:03 heartbeat.json
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas        95 Oct 11 13:03 pilot_heartbeat.json
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 13:04 boinc_mmap_file
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas        28 Oct 11 13:04 wrapper_checkpoint.txt
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas      5008 Oct 11 13:04 pilotlog.txt
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas   4177334 Oct 11 13:04 log.46676269._046390.job.log.1
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas       357 Oct 11 13:04 output.list
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas       620 Oct 11 13:04 runtime_log
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas   4894720 Oct 11 13:04 result.tar.gz
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 13:04 runtime_log.err
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas       658 Oct 11 13:04 5BMNDmQoaR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmRceNDmYqHiFo.diag
[2025-10-11 13:04:28] -rw-r--r--. 1 boincer umatlas     21206 Oct 11 13:04 stderr.txt
[2025-10-11 13:04:28] HITS file was successfully produced:
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas 192347918 Oct 11 13:02 shared/HITS.pool.root.1
[2025-10-11 13:04:28]  *** Contents of shared directory: ***
[2025-10-11 13:04:28] total 412508
[2025-10-11 13:04:28] -rw-r--r--. 2 boincer umatlas 224567452 Oct 11 03:52 ATLAS.root_0
[2025-10-11 13:04:28] -rw-r--r--. 2 boincer umatlas    569675 Oct 11 03:52 input.tar.gz
[2025-10-11 13:04:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 03:52 start_atlas.sh
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas 192347918 Oct 11 13:02 HITS.pool.root.1
[2025-10-11 13:04:28] -rw-------. 1 boincer umatlas   4894720 Oct 11 13:04 result.tar.gz
13:04:30 (956674): run_atlas exited; CPU time 54737.433598
13:04:30 (956674): called boinc_finish(0)

</stderr_txt>
]]>

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