Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:18 (1308494): wrapper (7.7.26015): starting
00:02:18 (1308494): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:02:18] Arguments: --nthreads 9
[2025-10-11 00:02:18] Threads: 9
[2025-10-11 00:02:18] Checking for CVMFS
[2025-10-11 00:02:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:02:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:02:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:02:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:02:21] 2.13.2.0 2356181 127316 260184 151571 0 404 30687502 32935936 26419 16776704 0 117677734 99.722 89475389 30424 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:02:21] CVMFS is ok
[2025-10-11 00:02:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:02:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:02:21] Further information can be found at the LHC@home message board.
[2025-10-11 00:02:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:02:21] Checking for apptainer binary...
[2025-10-11 00:02:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:02:21] Running /usr/bin/apptainer --version
[2025-10-11 00:02:21] apptainer version 1.4.3-1.el9
[2025-10-11 00:02:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:02:22] c-6-2.aglt2.org
[2025-10-11 00:02:22] apptainer works
[2025-10-11 00:02:23] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:02:23] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:02:23] Starting ATLAS job with PandaID=6837706474
[2025-10-11 00:02:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:38:43]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:38:43] 2025-10-11 17:37:39,440 | INFO     | time since job start (48868s) is within the limit (172800.0s)
[2025-10-11 13:38:43] 2025-10-11 17:37:39,780 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 13:38:43] 2025-10-11 17:37:39,788 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.0352000000007
[2025-10-11 13:38:43] 2025-10-11 17:37:39,795 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6837706474/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:38:43] 2025-10-11 17:37:39,797 | INFO     | extracted standard info from prmon json
[2025-10-11 13:38:43] 2025-10-11 17:37:39,797 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:38:43] 2025-10-11 17:37:39,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:38:43] 2025-10-11 17:37:39,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:38:43] 2025-10-11 17:37:39,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:38:43] 2025-10-11 17:37:39,825 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:38:43] 2025-10-11 17:37:39,827 | INFO     | sum of square deviations: 158761491583.8754
[2025-10-11 13:38:43] 2025-10-11 17:37:39,859 | INFO     | sum of deviations: 903753479472.2517
[2025-10-11 13:38:43] 2025-10-11 17:37:39,859 | INFO     | mean x: 1760179848.9125
[2025-10-11 13:38:43] 2025-10-11 17:37:39,860 | INFO     | mean y: 2275430.075
[2025-10-11 13:38:43] 2025-10-11 17:37:39,860 | INFO     | -- intersect: -10017589255.507107
[2025-10-11 13:38:43] 2025-10-11 17:37:39,860 | INFO     | intersect: -10017589255.507107
[2025-10-11 13:38:43] 2025-10-11 17:37:39,861 | INFO     | chi2: 4.688630484451814
[2025-10-11 13:38:43] 2025-10-11 17:37:39,862 | INFO     | sum of square deviations: 155803360023.01953
[2025-10-11 13:38:43] 2025-10-11 17:37:39,878 | INFO     | sum of deviations: 942062775872.8673
[2025-10-11 13:38:43] 2025-10-11 17:37:39,879 | INFO     | mean x: 1760179696.4150944
[2025-10-11 13:38:43] 2025-10-11 17:37:39,879 | INFO     | mean y: 2277392.8943396225
[2025-10-11 13:38:43] 2025-10-11 17:37:39,879 | INFO     | -- intersect: -10640623829.485395
[2025-10-11 13:38:43] 2025-10-11 17:37:39,879 | INFO     | intersect: -10640623829.485395
[2025-10-11 13:38:43] 2025-10-11 17:37:39,880 | INFO     | chi2: 4.010263253666321
[2025-10-11 13:38:43] 2025-10-11 17:37:39,881 | INFO     | current chi2=4.010263253666321 (change=14.468344925774337 %)
[2025-10-11 13:38:43] 2025-10-11 17:37:39,881 | INFO     | right removable region: 794
[2025-10-11 13:38:43] 2025-10-11 17:37:39,882 | INFO     | sum of square deviations: 155803158723.01935
[2025-10-11 13:38:43] 2025-10-11 17:37:39,898 | INFO     | sum of deviations: 734705407236.7552
[2025-10-11 13:38:43] 2025-10-11 17:37:39,898 | INFO     | mean x: 1760180001.4150944
[2025-10-11 13:38:43] 2025-10-11 17:37:39,898 | INFO     | mean y: 2284134.537106918
[2025-10-11 13:38:43] 2025-10-11 17:37:39,898 | INFO     | -- intersect: -8298021041.23082
[2025-10-11 13:38:43] 2025-10-11 17:37:39,898 | INFO     | intersect: -8298021041.23082
[2025-10-11 13:38:43] 2025-10-11 17:37:39,900 | INFO     | chi2: 2.6567397071739185
[2025-10-11 13:38:43] 2025-10-11 17:37:39,900 | INFO     | current chi2=2.6567397071739185 (change=43.33655177169417 %)
[2025-10-11 13:38:43] 2025-10-11 17:37:39,901 | INFO     | sum of square deviations: 152881803299.6519
[2025-10-11 13:38:43] 2025-10-11 17:37:39,916 | INFO     | sum of deviations: 647852577391.1334
[2025-10-11 13:38:43] 2025-10-11 17:37:39,917 | INFO     | mean x: 1760180153.9177215
[2025-10-11 13:38:43] 2025-10-11 17:37:39,917 | INFO     | mean y: 2288668.540506329
[2025-10-11 13:38:43] 2025-10-11 17:37:39,917 | INFO     | -- intersect: -7456658209.2198925
[2025-10-11 13:38:43] 2025-10-11 17:37:39,917 | INFO     | intersect: -7456658209.2198925
[2025-10-11 13:38:43] 2025-10-11 17:37:39,918 | INFO     | chi2: 2.253206162261727
[2025-10-11 13:38:43] 2025-10-11 17:37:39,918 | INFO     | current chi2=2.253206162261727 (change=15.189050843879857 %)
[2025-10-11 13:38:43] 2025-10-11 17:37:39,918 | INFO     | left removable region: 20
[2025-10-11 13:38:43] 2025-10-11 17:37:39,919 | INFO     | sum of square deviations: 143779439721.65414
[2025-10-11 13:38:43] 2025-10-11 17:37:39,934 | INFO     | sum of deviations: 526686309283.7624
[2025-10-11 13:38:43] 2025-10-11 17:37:39,934 | INFO     | mean x: 1760180275.9250646
[2025-10-11 13:38:43] 2025-10-11 17:37:39,934 | INFO     | mean y: 2299187.2545219637
[2025-10-11 13:38:43] 2025-10-11 17:37:39,934 | INFO     | -- intersect: -6445513205.085917
[2025-10-11 13:38:43] 2025-10-11 17:37:39,935 | INFO     | intersect: -6445513205.085917
[2025-10-11 13:38:43] 2025-10-11 17:37:39,936 | INFO     | chi2: 0.8658229243932241
[2025-10-11 13:38:43] 2025-10-11 17:37:39,936 | INFO     | -- intersect: -6445513205.085917
[2025-10-11 13:38:43] 2025-10-11 17:37:39,936 | INFO     | current memory leak: 3.66 B/s (using 774 data points, chi2=0.87)
[2025-10-11 13:38:43] 2025-10-11 17:37:39,938 | INFO     | could have reported an average CPU frequency of 2600 MHz (30 samples)
[2025-10-11 13:38:43] 2025-10-11 17:37:39,938 | INFO     | ..............................
[2025-10-11 13:38:43] 2025-10-11 17:37:39,938 | INFO     | . Timing measurements:
[2025-10-11 13:38:43] 2025-10-11 17:37:39,938 | INFO     | . get job = 1 s
[2025-10-11 13:38:43] 2025-10-11 17:37:39,938 | INFO     | . initial setup = 4 s
[2025-10-11 13:38:43] 2025-10-11 17:37:39,938 | INFO     | . payload setup = 24 s
[2025-10-11 13:38:43] 2025-10-11 17:37:39,938 | INFO     | . stage-in = 0 s
[2025-10-11 13:38:43] 2025-10-11 17:37:39,938 | INFO     | . payload execution = 48786 s
[2025-10-11 13:38:43] 2025-10-11 17:37:39,939 | INFO     | . stage-out = 2 s
[2025-10-11 13:38:43] 2025-10-11 17:37:39,939 | INFO     | . log creation = 0 s
[2025-10-11 13:38:43] 2025-10-11 17:37:39,939 | INFO     | ..............................
[2025-10-11 13:38:43] 2025-10-11 17:37:40,065 | INFO     | 
[2025-10-11 13:38:43] 2025-10-11 17:37:40,065 | INFO     | job summary report
[2025-10-11 13:38:43] 2025-10-11 17:37:40,065 | INFO     | --------------------------------------------------
[2025-10-11 13:38:43] 2025-10-11 17:37:40,066 | INFO     | PanDA job id: 6837706474
[2025-10-11 13:38:43] 2025-10-11 17:37:40,066 | INFO     | task id: 46676269
[2025-10-11 13:38:43] 2025-10-11 17:37:40,066 | INFO     | errors: (none)
[2025-10-11 13:38:43] 2025-10-11 17:37:40,066 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:38:43] 2025-10-11 17:37:40,066 | INFO     | pilot state: finished 
[2025-10-11 13:38:43] 2025-10-11 17:37:40,066 | INFO     | transexitcode: 0
[2025-10-11 13:38:43] 2025-10-11 17:37:40,066 | INFO     | exeerrorcode: 0
[2025-10-11 13:38:43] 2025-10-11 17:37:40,066 | INFO     | exeerrordiag: 
[2025-10-11 13:38:43] 2025-10-11 17:37:40,066 | INFO     | exitcode: 0
[2025-10-11 13:38:43] 2025-10-11 17:37:40,066 | INFO     | exitmsg: OK
[2025-10-11 13:38:43] 2025-10-11 17:37:40,067 | INFO     | cpuconsumptiontime: 53123 s
[2025-10-11 13:38:43] 2025-10-11 17:37:40,067 | INFO     | nevents: 400
[2025-10-11 13:38:43] 2025-10-11 17:37:40,067 | INFO     | neventsw: 0
[2025-10-11 13:38:43] 2025-10-11 17:37:40,067 | INFO     | pid: 1346571
[2025-10-11 13:38:43] 2025-10-11 17:37:40,067 | INFO     | pgrp: 1346571
[2025-10-11 13:38:43] 2025-10-11 17:37:40,067 | INFO     | corecount: 9
[2025-10-11 13:38:43] 2025-10-11 17:37:40,067 | INFO     | event service: False
[2025-10-11 13:38:43] 2025-10-11 17:37:40,068 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2349231, 25: 2349259, 48813: 2396156, 48817: 2405210, 48827: 2405348}
[2025-10-11 13:38:43] 2025-10-11 17:37:40,068 | INFO     | --------------------------------------------------
[2025-10-11 13:38:43] 2025-10-11 17:37:40,068 | INFO     | 
[2025-10-11 13:38:43] 2025-10-11 17:37:40,068 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-11 13:38:43] 2025-10-11 17:37:40,168 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,168 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,169 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,169 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,170 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:38:43] 2025-10-11 17:37:40,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,170 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:38:43] 2025-10-11 17:37:40,171 | INFO     | job 6837706474 has completed (purged errors)
[2025-10-11 13:38:43] 2025-10-11 17:37:40,171 | INFO     | overall cleanup function is called
[2025-10-11 13:38:43] 2025-10-11 17:37:40,917 | INFO     | PID=1320494 has CPU usage=13.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 13:38:43] 2025-10-11 17:37:40,917 | INFO     | .. there are 39 such processes running
[2025-10-11 13:38:43] 2025-10-11 17:37:41,184 | INFO     | --- collectZombieJob: --- 10, [1346571]
[2025-10-11 13:38:43] 2025-10-11 17:37:41,185 | INFO     | zombie collector waiting for pid 1346571
[2025-10-11 13:38:43] 2025-10-11 17:37:41,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:38:43] 2025-10-11 17:37:41,185 | INFO     | collected zombie processes
[2025-10-11 13:38:43] 2025-10-11 17:37:41,185 | INFO     | will attempt to kill all subprocesses of pid=1346571
[2025-10-11 13:38:43] 2025-10-11 17:37:41,671 | INFO     | process IDs to be killed: [1346571] (in reverse order)
[2025-10-11 13:38:43] 2025-10-11 17:37:41,788 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:38:43] 2025-10-11 17:37:41,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:38:43] 2025-10-11 17:37:41,820 | INFO     | did not find any defunct processes belonging to 1346571
[2025-10-11 13:38:43] 2025-10-11 17:37:41,843 | INFO     | did not find any defunct processes belonging to 1346571
[2025-10-11 13:38:43] 2025-10-11 17:37:41,848 | INFO     | ready for new job
[2025-10-11 13:38:43] 2025-10-11 17:37:41,849 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:38:43] 2025-10-11 17:37:41,852 | INFO     | ***************************************
[2025-10-11 13:38:43] 2025-10-11 17:37:41,853 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:38:43] 2025-10-11 17:37:41,853 | INFO     | ***************************************
[2025-10-11 13:38:43] 2025-10-11 17:37:41,853 | INFO     | 
[2025-10-11 13:38:43] 2025-10-11 17:37:41,870 | INFO     | architecture information:
[2025-10-11 13:38:43] 2025-10-11 17:37:41,870 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:38:43] 2025-10-11 17:37:41,943 | INFO     | cat /etc/os-release:
[2025-10-11 13:38:43] NAME="CentOS Linux"
[2025-10-11 13:38:43] VERSION="7 (Core)"
[2025-10-11 13:38:43] ID="centos"
[2025-10-11 13:38:43] ID_LIKE="rhel fedora"
[2025-10-11 13:38:43] VERSION_ID="7"
[2025-10-11 13:38:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:38:43] ANSI_COLOR="0;31"
[2025-10-11 13:38:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:38:43] HOME_URL="https://www.centos.org/"
[2025-10-11 13:38:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:38:43] 
[2025-10-11 13:38:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:38:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:38:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:38:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:38:43] 
[2025-10-11 13:38:43] 2025-10-11 17:37:41,943 | INFO     | ***************************************
[2025-10-11 13:38:43] 2025-10-11 17:37:42,446 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-11 13:38:43] 2025-10-11 17:37:42,468 | INFO     | sufficient remaining disk space (75898028032 B)
[2025-10-11 13:38:43] 2025-10-11 17:37:42,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:38:43] 2025-10-11 17:37:42,469 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:38:43] 2025-10-11 17:37:42,469 | INFO     | update_server=False
[2025-10-11 13:38:43] 2025-10-11 17:37:42,469 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:38:43] 2025-10-11 17:37:42,477 | INFO     | all payload control threads have been joined
[2025-10-11 13:38:43] 2025-10-11 17:37:42,858 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:38:43] 2025-10-11 17:37:42,858 | INFO     | aborting loop
[2025-10-11 13:38:43] 2025-10-11 17:37:42,977 | INFO     | all data control threads have been joined
[2025-10-11 13:38:43] 2025-10-11 17:37:43,019 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:38:43] 2025-10-11 17:37:43,476 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:43,483 | INFO     | [payload] control thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:43,627 | INFO     | all job control threads have been joined
[2025-10-11 13:38:43] 2025-10-11 17:37:43,779 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:43,812 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:43,868 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:43,907 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:43,965 | INFO     | [job] validate thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:43,982 | INFO     | [data] control thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:44,023 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:44,053 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:44,196 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:44,633 | INFO     | [job] control thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:44,879 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:45,025 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:45,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:38:43] 2025-10-11 17:37:45,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:38:43] 2025-10-11 17:37:46,085 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:37:49,641 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:38:43] 2025-10-11 17:38:13,595 | INFO     | PID=1320494 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:38:43] 2025-10-11 17:38:13,595 | INFO     | .. there are 40 such processes running
[2025-10-11 13:38:43] 2025-10-11 17:38:13,595 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:38:43] 2025-10-11 17:38:13,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:38:43] 2025-10-11 17:38:13,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:38:43] 2025-10-11 17:38:37,857 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:38:43] 2025-10-11 17:38:38,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517978654528)>', '<ExcThread(monitor, started 140517455140608)>']
[2025-10-11 13:38:43] 2025-10-11 17:38:38,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:38:43] 2025-10-11 17:38:38,738 | INFO     | [monitor] control thread has ended
[2025-10-11 13:38:43] 2025-10-11 17:38:43,278 | INFO     | all workflow threads have been joined
[2025-10-11 13:38:43] 2025-10-11 17:38:43,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:38:43] 2025-10-11 17:38:43,279 | INFO     | traces error code: 0
[2025-10-11 13:38:43] 2025-10-11 17:38:43,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:38:43] 2025-10-11 17:38:43,437 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:38:43] 2025-10-11 17:38:43,440 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:38:43] 2025-10-11 17:38:43,443 [wrapper] pilotpid: 1320494
[2025-10-11 13:38:43] 2025-10-11 17:38:43,446 [wrapper] Pilot exit status: 0
[2025-10-11 13:38:43] 2025-10-11 17:38:43,459 [wrapper] pandaids: 6837706474
[2025-10-11 13:38:43] 2025-10-11 17:38:43,551 [wrapper] cleanup supervisor_pilot 3670303 1320495
[2025-10-11 13:38:43] 2025-10-11 17:38:43,558 [wrapper] Test setup, not cleaning
[2025-10-11 13:38:43] 2025-10-11 17:38:43,563 [wrapper] apfmon messages muted
[2025-10-11 13:38:43] 2025-10-11 17:38:43,566 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:38:43] 2025-10-11 17:38:43,569 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:38:43]  *** Error codes and diagnostics ***
[2025-10-11 13:38:43]     "exeErrorCode": 0,
[2025-10-11 13:38:43]     "exeErrorDiag": "",
[2025-10-11 13:38:43]     "pilotErrorCode": 0,
[2025-10-11 13:38:43]     "pilotErrorDiag": "",
[2025-10-11 13:38:43]  *** Listing of results directory ***
[2025-10-11 13:38:43] total 427012
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 14:07 pilot3.tar.gz
[2025-10-11 13:38:43] -rwx------. 1 boincer umatlas     36292 Oct 10 14:12 runpilot2-wrapper.sh
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 14:12 queuedata.json
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:38:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:02 run_atlas
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:02 job.xml
[2025-10-11 13:38:43] -rw-r--r--. 2 boincer umatlas 219728033 Oct 11 00:02 EVNT.46676267._001737.pool.root.1
[2025-10-11 13:38:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 13:38:43] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:02 shared
[2025-10-11 13:38:43] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 00:02 input.tar.gz
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:02 boinc_lockfile
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:02 pandaJob.out
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas    975509 Oct 11 00:03 agis_schedconf.cvmfs.json
[2025-10-11 13:38:43] drwx------. 5 boincer umatlas      4096 Oct 11 00:03 pilot3
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas 199848385 Oct 11 13:36 HITS.46676269._042905.pool.root.1
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas       531 Oct 11 13:37 boinc_task_state.xml
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas      1039 Oct 11 13:37 memory_monitor_summary.json
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas        95 Oct 11 13:37 pilot_heartbeat.json
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas   1560580 Oct 11 13:37 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas    916319 Oct 11 13:37 log.46676269._042905.job.log.tgz.1
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas      7824 Oct 11 13:37 heartbeat.json
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas      6657 Oct 11 13:37 init_data.xml
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas        28 Oct 11 13:38 wrapper_checkpoint.txt
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 13:38 boinc_mmap_file
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas      4824 Oct 11 13:38 pilotlog.txt
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas   5971639 Oct 11 13:38 log.46676269._042905.job.log.1
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas       357 Oct 11 13:38 output.list
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas       620 Oct 11 13:38 runtime_log
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas   6912000 Oct 11 13:38 result.tar.gz
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas       655 Oct 11 13:38 w0fKDmimWR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZMQMDmcB0Zkm.diag
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas      8689 Oct 11 13:38 runtime_log.err
[2025-10-11 13:38:43] -rw-r--r--. 1 boincer umatlas     21273 Oct 11 13:38 stderr.txt
[2025-10-11 13:38:43] HITS file was successfully produced:
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas 199848385 Oct 11 13:36 shared/HITS.pool.root.1
[2025-10-11 13:38:43]  *** Contents of shared directory: ***
[2025-10-11 13:38:43] total 417080
[2025-10-11 13:38:43] -rw-r--r--. 2 boincer umatlas 219728033 Oct 11 00:02 ATLAS.root_0
[2025-10-11 13:38:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 13:38:43] -rw-r--r--. 2 boincer umatlas    569681 Oct 11 00:02 input.tar.gz
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas 199848385 Oct 11 13:36 HITS.pool.root.1
[2025-10-11 13:38:43] -rw-------. 1 boincer umatlas   6912000 Oct 11 13:38 result.tar.gz
13:38:45 (1308494): run_atlas exited; CPU time 55332.067697
13:38:45 (1308494): called boinc_finish(0)

</stderr_txt>
]]>

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