Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:39 (2973305): wrapper (7.7.26015): starting
00:02:39 (2973305): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 00:02:39] Arguments: --nthreads 8
[2025-10-11 00:02:39] Threads: 8
[2025-10-11 00:02:39] Checking for CVMFS
[2025-10-11 00:02:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:02:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:02:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:02:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:02:53] 2.13.2.0 1140251 21002 262876 151571 3 337 38506333 40960000 19251 16776704 0 24729778 99.707 20807645 8716 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:02:53] CVMFS is ok
[2025-10-11 00:02:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:02:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:02:53] Further information can be found at the LHC@home message board.
[2025-10-11 00:02:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:02:53] Checking for apptainer binary...
[2025-10-11 00:02:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:02:53] Running /usr/bin/apptainer --version
[2025-10-11 00:02:53] apptainer version 1.4.3-1.el9
[2025-10-11 00:02:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:02:55] c7-10-13.aglt2.org
[2025-10-11 00:02:55] apptainer works
[2025-10-11 00:02:55] Set ATHENA_PROC_NUMBER=8
[2025-10-11 00:02:55] Set ATHENA_CORE_NUMBER=8
[2025-10-11 00:02:55] Starting ATLAS job with PandaID=6837932041
[2025-10-11 00:02:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 02:08:04]  *** The last 200 lines of the pilot log: ***
[2025-10-12 02:08:04] 2025-10-12 06:06:44,649 | INFO     | monitor loop #3040: job 0:6837932041 is in state 'finished'
[2025-10-12 02:08:04] 2025-10-12 06:06:44,649 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:08:04] 2025-10-12 06:06:46,726 | INFO     | time since job start (93646s) is within the limit (172800.0s)
[2025-10-12 02:08:04] 2025-10-12 06:06:47,288 | INFO     | monitor loop #3041: job 0:6837932041 is in state 'finished'
[2025-10-12 02:08:04] 2025-10-12 06:06:47,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:08:04] 2025-10-12 06:06:48,355 | INFO     | sum of deviations: 2412449447745.005
[2025-10-12 02:08:04] 2025-10-12 06:06:48,372 | INFO     | mean x: 1760202491.0
[2025-10-12 02:08:04] 2025-10-12 06:06:48,372 | INFO     | mean y: 1974659.9535036017
[2025-10-12 02:08:04] 2025-10-12 06:06:48,373 | INFO     | -- intersect: -3844576229.5279217
[2025-10-12 02:08:04] 2025-10-12 06:06:48,373 | INFO     | intersect: -3844576229.5279217
[2025-10-12 02:08:04] 2025-10-12 06:06:48,403 | INFO     | chi2: 16.73201805630983
[2025-10-12 02:08:04] 2025-10-12 06:06:48,427 | INFO     | sum of square deviations: 1093140867586.4333
[2025-10-12 02:08:04] 2025-10-12 06:06:49,018 | INFO     | sum of deviations: 2797796074392.682
[2025-10-12 02:08:04] 2025-10-12 06:06:49,018 | INFO     | mean x: 1760202338.5065703
[2025-10-12 02:08:04] 2025-10-12 06:06:49,018 | INFO     | mean y: 1980096.432325887
[2025-10-12 02:08:04] 2025-10-12 06:06:49,018 | INFO     | -- intersect: -4503100025.294174
[2025-10-12 02:08:04] 2025-10-12 06:06:49,019 | INFO     | intersect: -4503100025.294174
[2025-10-12 02:08:04] 2025-10-12 06:06:49,039 | INFO     | chi2: 13.175790336303038
[2025-10-12 02:08:04] 2025-10-12 06:06:49,039 | INFO     | current chi2=13.175790336303038 (change=21.254027506058655 %)
[2025-10-12 02:08:04] 2025-10-12 06:06:49,039 | INFO     | right removable region: 1521
[2025-10-12 02:08:04] 2025-10-12 06:06:49,048 | INFO     | sum of square deviations: 1093138631434.3706
[2025-10-12 02:08:04] 2025-10-12 06:06:49,924 | INFO     | monitor loop #3042: job 0:6837932041 is in state 'finished'
[2025-10-12 02:08:04] 2025-10-12 06:06:49,924 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:08:04] 2025-10-12 06:06:50,939 | INFO     | sum of deviations: 1994717526016.434
[2025-10-12 02:08:04] 2025-10-12 06:06:50,940 | INFO     | mean x: 1760202643.5091984
[2025-10-12 02:08:04] 2025-10-12 06:06:50,940 | INFO     | mean y: 1980551.826544021
[2025-10-12 02:08:04] 2025-10-12 06:06:50,941 | INFO     | -- intersect: -3209969846.2132072
[2025-10-12 02:08:04] 2025-10-12 06:06:50,941 | INFO     | intersect: -3209969846.2132072
[2025-10-12 02:08:04] 2025-10-12 06:06:51,112 | INFO     | chi2: 12.480411357780847
[2025-10-12 02:08:04] 2025-10-12 06:06:51,112 | INFO     | current chi2=12.480411357780847 (change=25.410005441188577 %)
[2025-10-12 02:08:04] 2025-10-12 06:06:51,154 | INFO     | sum of square deviations: 1082398325261.5548
[2025-10-12 02:08:04] 2025-10-12 06:06:52,884 | INFO     | monitor loop #3043: job 0:6837932041 is in state 'finished'
[2025-10-12 02:08:04] 2025-10-12 06:06:52,884 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:08:04] 2025-10-12 06:06:55,460 | INFO     | monitor loop #3044: job 0:6837932041 is in state 'finished'
[2025-10-12 02:08:04] 2025-10-12 06:06:55,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 02:08:04] 2025-10-12 06:06:55,937 | INFO     | sum of deviations: 1683255852165.9949
[2025-10-12 02:08:04] 2025-10-12 06:06:55,938 | INFO     | mean x: 1760202796.0171392
[2025-10-12 02:08:04] 2025-10-12 06:06:55,938 | INFO     | mean y: 1984973.5385629532
[2025-10-12 02:08:04] 2025-10-12 06:06:55,938 | INFO     | -- intersect: -2735336018.415889
[2025-10-12 02:08:04] 2025-10-12 06:06:55,938 | INFO     | intersect: -2735336018.415889
[2025-10-12 02:08:04] 2025-10-12 06:06:55,943 | INFO     | chi2: 10.190114523902082
[2025-10-12 02:08:04] 2025-10-12 06:06:55,944 | INFO     | current chi2=10.190114523902082 (change=18.351132572652674 %)
[2025-10-12 02:08:04] 2025-10-12 06:06:55,944 | INFO     | left removable region: 20
[2025-10-12 02:08:04] 2025-10-12 06:06:55,956 | INFO     | sum of square deviations: 1048506022367.4006
[2025-10-12 02:08:04] 2025-10-12 06:06:57,795 | INFO     | sum of deviations: 1699335875963.1714
[2025-10-12 02:08:04] 2025-10-12 06:06:57,796 | INFO     | mean x: 1760202918.032645
[2025-10-12 02:08:04] 2025-10-12 06:06:57,796 | INFO     | mean y: 1998046.037308461
[2025-10-12 02:08:04] 2025-10-12 06:06:57,796 | INFO     | -- intersect: -2850800034.0673904
[2025-10-12 02:08:04] 2025-10-12 06:06:57,796 | INFO     | intersect: -2850800034.0673904
[2025-10-12 02:08:04] 2025-10-12 06:06:57,935 | INFO     | chi2: 3.5444337541830846
[2025-10-12 02:08:04] 2025-10-12 06:06:57,936 | INFO     | -- intersect: -2850800034.0673904
[2025-10-12 02:08:04] 2025-10-12 06:06:57,936 | INFO     | current memory leak: 1.62 B/s (using 1501 data points, chi2=3.54)
[2025-10-12 02:08:04] 2025-10-12 06:06:57,967 | INFO     | could have reported an average CPU frequency of 3291 MHz (52 samples)
[2025-10-12 02:08:04] 2025-10-12 06:06:57,968 | INFO     | ..............................
[2025-10-12 02:08:04] 2025-10-12 06:06:57,968 | INFO     | . Timing measurements:
[2025-10-12 02:08:04] 2025-10-12 06:06:57,968 | INFO     | . get job = 2 s
[2025-10-12 02:08:04] 2025-10-12 06:06:57,968 | INFO     | . initial setup = 18 s
[2025-10-12 02:08:04] 2025-10-12 06:06:57,968 | INFO     | . payload setup = 115 s
[2025-10-12 02:08:04] 2025-10-12 06:06:57,968 | INFO     | . stage-in = 2 s
[2025-10-12 02:08:04] 2025-10-12 06:06:57,969 | INFO     | . payload execution = 93209 s
[2025-10-12 02:08:04] 2025-10-12 06:06:57,969 | INFO     | . stage-out = 29 s
[2025-10-12 02:08:04] 2025-10-12 06:06:57,969 | INFO     | . log creation = 6 s
[2025-10-12 02:08:04] 2025-10-12 06:06:57,969 | INFO     | ..............................
[2025-10-12 02:08:04] 2025-10-12 06:07:00,166 | INFO     | 
[2025-10-12 02:08:04] 2025-10-12 06:07:00,166 | INFO     | job summary report
[2025-10-12 02:08:04] 2025-10-12 06:07:00,167 | INFO     | --------------------------------------------------
[2025-10-12 02:08:04] 2025-10-12 06:07:00,167 | INFO     | PanDA job id: 6837932041
[2025-10-12 02:08:04] 2025-10-12 06:07:00,167 | INFO     | task id: 46676269
[2025-10-12 02:08:04] 2025-10-12 06:07:00,167 | INFO     | errors: (none)
[2025-10-12 02:08:04] 2025-10-12 06:07:00,167 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 02:08:04] 2025-10-12 06:07:00,167 | INFO     | pilot state: finished 
[2025-10-12 02:08:04] 2025-10-12 06:07:00,168 | INFO     | transexitcode: 0
[2025-10-12 02:08:04] 2025-10-12 06:07:00,168 | INFO     | exeerrorcode: 0
[2025-10-12 02:08:04] 2025-10-12 06:07:00,168 | INFO     | exeerrordiag: 
[2025-10-12 02:08:04] 2025-10-12 06:07:00,168 | INFO     | exitcode: 0
[2025-10-12 02:08:04] 2025-10-12 06:07:00,168 | INFO     | exitmsg: OK
[2025-10-12 02:08:04] 2025-10-12 06:07:00,168 | INFO     | cpuconsumptiontime: 106166 s
[2025-10-12 02:08:04] 2025-10-12 06:07:00,168 | INFO     | nevents: 400
[2025-10-12 02:08:04] 2025-10-12 06:07:00,169 | INFO     | neventsw: 0
[2025-10-12 02:08:04] 2025-10-12 06:07:00,169 | INFO     | pid: 3041540
[2025-10-12 02:08:04] 2025-10-12 06:07:00,169 | INFO     | pgrp: 3041540
[2025-10-12 02:08:04] 2025-10-12 06:07:00,169 | INFO     | corecount: 8
[2025-10-12 02:08:04] 2025-10-12 06:07:00,169 | INFO     | event service: False
[2025-10-12 02:08:04] 2025-10-12 06:07:00,169 | INFO     | sizes: {0: 2347978, 2: 2348663, 4: 2348691, 6: 2348691, 8: 2348862, 9: 2348890, 22: 2349046, 35: 2349074, 48: 2349102, 59: 2349130, 72: 2349158, 89: 2349728, 90: 2
[2025-10-12 02:08:04] 2025-10-12 06:07:00,174 | INFO     | --------------------------------------------------
[2025-10-12 02:08:04] 2025-10-12 06:07:00,174 | INFO     | 
[2025-10-12 02:08:04] 2025-10-12 06:07:00,174 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-12 02:08:04] 2025-10-12 06:07:00,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,754 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,771 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 02:08:04] 2025-10-12 06:07:00,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,771 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 02:08:04] 2025-10-12 06:07:00,772 | INFO     | job 6837932041 has completed (purged errors)
[2025-10-12 02:08:04] 2025-10-12 06:07:00,772 | INFO     | overall cleanup function is called
[2025-10-12 02:08:04] 2025-10-12 06:07:01,432 | INFO     | PID=2992672 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 02:08:04] 2025-10-12 06:07:01,432 | INFO     | .. there are 29 such processes running
[2025-10-12 02:08:04] 2025-10-12 06:07:01,836 | INFO     | --- collectZombieJob: --- 10, [3041540]
[2025-10-12 02:08:04] 2025-10-12 06:07:01,836 | INFO     | zombie collector waiting for pid 3041540
[2025-10-12 02:08:04] 2025-10-12 06:07:01,836 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 02:08:04] 2025-10-12 06:07:01,837 | INFO     | collected zombie processes
[2025-10-12 02:08:04] 2025-10-12 06:07:01,837 | INFO     | will attempt to kill all subprocesses of pid=3041540
[2025-10-12 02:08:04] 2025-10-12 06:07:08,730 | INFO     | process IDs to be killed: [3041540] (in reverse order)
[2025-10-12 02:08:04] 2025-10-12 06:07:10,727 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 02:08:04] 2025-10-12 06:07:10,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 02:08:04] 2025-10-12 06:07:10,971 | INFO     | did not find any defunct processes belonging to 3041540
[2025-10-12 02:08:04] 2025-10-12 06:07:11,076 | INFO     | did not find any defunct processes belonging to 3041540
[2025-10-12 02:08:04] 2025-10-12 06:07:11,108 | INFO     | ready for new job
[2025-10-12 02:08:04] 2025-10-12 06:07:11,109 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 02:08:04] 2025-10-12 06:07:11,166 | INFO     | ***************************************
[2025-10-12 02:08:04] 2025-10-12 06:07:11,167 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 02:08:04] 2025-10-12 06:07:11,167 | INFO     | ***************************************
[2025-10-12 02:08:04] 2025-10-12 06:07:11,167 | INFO     | 
[2025-10-12 02:08:04] 2025-10-12 06:07:11,502 | INFO     | architecture information:
[2025-10-12 02:08:04] 2025-10-12 06:07:11,507 | INFO     | executing command: cat /etc/os-release
[2025-10-12 02:08:04] 2025-10-12 06:07:11,750 | INFO     | cat /etc/os-release:
[2025-10-12 02:08:04] NAME="CentOS Linux"
[2025-10-12 02:08:04] VERSION="7 (Core)"
[2025-10-12 02:08:04] ID="centos"
[2025-10-12 02:08:04] ID_LIKE="rhel fedora"
[2025-10-12 02:08:04] VERSION_ID="7"
[2025-10-12 02:08:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 02:08:04] ANSI_COLOR="0;31"
[2025-10-12 02:08:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 02:08:04] HOME_URL="https://www.centos.org/"
[2025-10-12 02:08:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 02:08:04] 
[2025-10-12 02:08:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 02:08:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 02:08:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 02:08:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 02:08:04] 
[2025-10-12 02:08:04] 2025-10-12 06:07:11,777 | INFO     | ***************************************
[2025-10-12 02:08:04] 2025-10-12 06:07:12,301 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-12 02:08:04] 2025-10-12 06:07:12,484 | INFO     | sufficient remaining disk space (82824921088 B)
[2025-10-12 02:08:04] 2025-10-12 06:07:12,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 02:08:04] 2025-10-12 06:07:12,485 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 02:08:04] 2025-10-12 06:07:12,485 | INFO     | update_server=False
[2025-10-12 02:08:04] 2025-10-12 06:07:12,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 02:08:04] 2025-10-12 06:07:12,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 02:08:04] 2025-10-12 06:07:12,509 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:08:04] 2025-10-12 06:07:12,509 | INFO     | aborting loop
[2025-10-12 02:08:04] 2025-10-12 06:07:12,640 | INFO     | all data control threads have been joined
[2025-10-12 02:08:04] 2025-10-12 06:07:12,892 | INFO     | all job control threads have been joined
[2025-10-12 02:08:04] 2025-10-12 06:07:13,491 | INFO     | [job] retrieve thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:13,521 | INFO     | [job] job monitor thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:13,522 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:13,550 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 02:08:04] 2025-10-12 06:07:13,646 | INFO     | [data] control thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:13,677 | INFO     | [payload] validate_post thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:13,678 | INFO     | [payload] failed_post thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:13,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:13,737 | INFO     | [job] validate thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:13,764 | INFO     | all payload control threads have been joined
[2025-10-12 02:08:04] 2025-10-12 06:07:13,902 | INFO     | [job] control thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:14,230 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:14,231 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:14,251 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 02:08:04] 2025-10-12 06:07:14,266 | INFO     | [data] copytool_in thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:14,507 | INFO     | [data] copytool_out thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:14,556 | INFO     | [job] queue monitor thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:14,772 | INFO     | [payload] control thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:18,300 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 02:08:04] 2025-10-12 06:07:24,619 | INFO     | [monitor] cgroup control has ended
[2025-10-12 02:08:04] 2025-10-12 06:07:25,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041289365312)>', '<ExcThread(monitor, started 140040336295680)>']
[2025-10-12 02:08:04] 2025-10-12 06:07:30,725 | INFO     | all workflow threads have been joined
[2025-10-12 02:08:04] 2025-10-12 06:07:30,761 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 02:08:04] 2025-10-12 06:07:30,762 | INFO     | traces error code: 0
[2025-10-12 02:08:04] 2025-10-12 06:07:30,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 02:08:04] 2025-10-12 06:07:40,692 | INFO     | PID=2992672 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 02:08:04] 2025-10-12 06:07:40,693 | INFO     | .. there are 29 such processes running
[2025-10-12 02:08:04] 2025-10-12 06:07:40,695 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 02:08:04] 2025-10-12 06:07:40,695 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 02:08:04] 2025-10-12 06:07:40,695 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 02:08:04] 2025-10-12 06:07:40,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 02:08:04] 2025-10-12 06:07:40,696 | INFO     | [monitor] control thread has ended
[2025-10-12 02:08:04] 2025-10-12 06:07:41,621 [wrapper] ==== pilot stdout END ====
[2025-10-12 02:08:04] 2025-10-12 06:07:41,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 02:08:04] 2025-10-12 06:07:41,659 [wrapper] pilotpid: 2992672
[2025-10-12 02:08:04] 2025-10-12 06:07:41,682 [wrapper] Pilot exit status: 0
[2025-10-12 02:08:04] 2025-10-12 06:07:42,241 [wrapper] pandaids: 6837932041
[2025-10-12 02:08:04] 2025-10-12 06:07:46,283 [wrapper] cleanup supervisor_pilot 2128151 2992673
[2025-10-12 02:08:04] 2025-10-12 06:07:46,509 [wrapper] Test setup, not cleaning
[2025-10-12 02:08:04] 2025-10-12 06:07:46,528 [wrapper] apfmon messages muted
[2025-10-12 02:08:04] 2025-10-12 06:07:46,725 [wrapper] ==== wrapper stdout END ====
[2025-10-12 02:08:04] 2025-10-12 06:07:46,788 [wrapper] ==== wrapper stderr END ====
[2025-10-12 02:08:04]  *** Error codes and diagnostics ***
[2025-10-12 02:08:05]     "exeErrorCode": 0,
[2025-10-12 02:08:05]     "exeErrorDiag": "",
[2025-10-12 02:08:05]     "pilotErrorCode": 0,
[2025-10-12 02:08:05]     "pilotErrorDiag": "",
[2025-10-12 02:08:05]  *** Listing of results directory ***
[2025-10-12 02:08:05] total 425416
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 21:35 pilot3.tar.gz
[2025-10-12 02:08:05] -rwx------. 1 boincer umatlas     36292 Oct 10 21:44 runpilot2-wrapper.sh
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 21:44 queuedata.json
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 02:08:05] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:02 run_atlas
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:02 job.xml
[2025-10-12 02:08:05] -rw-r--r--. 2 boincer umatlas 221220468 Oct 11 00:02 EVNT.46676267._001961.pool.root.1
[2025-10-12 02:08:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-12 02:08:05] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:02 shared
[2025-10-12 02:08:05] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 00:02 input.tar.gz
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:02 boinc_lockfile
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 00:02 pandaJob.out
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas    975509 Oct 11 00:05 agis_schedconf.cvmfs.json
[2025-10-12 02:08:05] drwx------. 5 boincer umatlas      4096 Oct 11 00:06 pilot3
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas 192393535 Oct 12 01:57 HITS.46676269._048623.pool.root.1
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas       532 Oct 12 01:57 boinc_task_state.xml
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas      6898 Oct 12 02:03 init_data.xml
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas      1033 Oct 12 02:04 memory_monitor_summary.json
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas   1560580 Oct 12 02:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas   1192185 Oct 12 02:05 log.46676269._048623.job.log.tgz.1
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas      7790 Oct 12 02:06 heartbeat.json
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas        95 Oct 12 02:07 pilot_heartbeat.json
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas       823 Oct 12 02:07 pilotlog.txt
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas   7865103 Oct 12 02:07 log.46676269._048623.job.log.1
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas       357 Oct 12 02:07 output.list
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas       620 Oct 12 02:07 runtime_log
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas   9072640 Oct 12 02:07 result.tar.gz
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 02:07 runtime_log.err
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas       661 Oct 12 02:07 0oDODmapdR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS1eNDmbJuZEm.diag
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 02:08 boinc_mmap_file
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas        29 Oct 12 02:08 wrapper_checkpoint.txt
[2025-10-12 02:08:05] -rw-r--r--. 1 boincer umatlas     21524 Oct 12 02:08 stderr.txt
[2025-10-12 02:08:05] HITS file was successfully produced:
[2025-10-12 02:08:05] -rw-------. 1 boincer umatlas 192393535 Oct 12 01:57 shared/HITS.pool.root.1
[2025-10-12 02:08:05]  *** Contents of shared directory: ***
[2025-10-12 02:08:06] total 413364
[2025-10-12 02:08:06] -rw-r--r--. 2 boincer umatlas 221220468 Oct 11 00:02 ATLAS.root_0
[2025-10-12 02:08:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-12 02:08:06] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 00:02 input.tar.gz
[2025-10-12 02:08:06] -rw-------. 1 boincer umatlas 192393535 Oct 12 01:57 HITS.pool.root.1
[2025-10-12 02:08:06] -rw-------. 1 boincer umatlas   9072640 Oct 12 02:07 result.tar.gz
02:08:07 (2973305): run_atlas exited; CPU time 109374.252316
02:08:07 (2973305): called boinc_finish(0)

</stderr_txt>
]]>

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