Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:48:54 (256130): wrapper (7.7.26015): starting
06:48:54 (256130): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 06:48:54] Arguments: --nthreads 9
[2025-10-11 06:48:54] Threads: 9
[2025-10-11 06:48:54] Checking for CVMFS
[2025-10-11 06:48:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 06:48:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 06:48:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 06:48:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 06:48:54] 2.13.2.0 129930 116039 512200 151581 1 324 29385133 40960000 13801 16776704 1 76823136 99.707 55972109 27020 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 06:48:54] CVMFS is ok
[2025-10-11 06:48:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 06:48:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 06:48:54] Further information can be found at the LHC@home message board.
[2025-10-11 06:48:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 06:48:54] Checking for apptainer binary...
[2025-10-11 06:48:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 06:48:54] Running /usr/bin/apptainer --version
[2025-10-11 06:48:55] apptainer version 1.4.3-1.el9
[2025-10-11 06:48:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 06:48:55] c-211-13.aglt2.org
[2025-10-11 06:48:55] apptainer works
[2025-10-11 06:48:55] Set ATHENA_PROC_NUMBER=9
[2025-10-11 06:48:55] Set ATHENA_CORE_NUMBER=9
[2025-10-11 06:48:55] Starting ATLAS job with PandaID=6837874204
[2025-10-11 06:48:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:09:58 (636047): wrapper (7.7.26015): starting
10:09:58 (636047): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 10:09:58] Arguments: --nthreads 9
[2025-10-11 10:09:58] Threads: 9
[2025-10-11 10:09:58] This job has been restarted, cleaning up previous attempt
[2025-10-11 10:09:58] Checking for CVMFS
[2025-10-11 10:09:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 10:09:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 10:09:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 10:09:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 10:09:59] 2.13.2.0 129930 116240 509976 151586 0 51 29729195 40960000 15239 16776704 1 77154384 99.708 56018412 27025 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 10:09:59] CVMFS is ok
[2025-10-11 10:09:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 10:09:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 10:09:59] Further information can be found at the LHC@home message board.
[2025-10-11 10:09:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 10:09:59] Checking for apptainer binary...
[2025-10-11 10:09:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 10:09:59] Running /usr/bin/apptainer --version
[2025-10-11 10:10:02] apptainer version 1.4.3-1.el9
[2025-10-11 10:10:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 10:10:03] c-211-13.aglt2.org
[2025-10-11 10:10:03] apptainer works
[2025-10-11 10:10:03] Set ATHENA_PROC_NUMBER=9
[2025-10-11 10:10:03] Set ATHENA_CORE_NUMBER=9
[2025-10-11 10:10:03] Starting ATLAS job with PandaID=6837874204
[2025-10-11 10:10:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:54:42]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:54:42] 2025-10-11 19:54:04,545 | INFO     | fitting pss+swap vs Time
[2025-10-11 15:54:42] 2025-10-11 19:54:04,546 | INFO     | sum of square deviations: 11762484870.354166
[2025-10-11 15:54:42] 2025-10-11 19:54:04,594 | INFO     | sum of deviations: 36179063089.62493
[2025-10-11 15:54:42] 2025-10-11 19:54:04,594 | INFO     | mean x: 1760202162.2708333
[2025-10-11 15:54:42] 2025-10-11 19:54:04,595 | INFO     | mean y: 2535096.839285714
[2025-10-11 15:54:42] 2025-10-11 19:54:04,595 | INFO     | -- intersect: -5411496528.38254
[2025-10-11 15:54:42] 2025-10-11 19:54:04,595 | INFO     | intersect: -5411496528.38254
[2025-10-11 15:54:42] 2025-10-11 19:54:04,596 | INFO     | chi2: 4.268736808524143
[2025-10-11 15:54:42] 2025-10-11 19:54:04,637 | INFO     | sum of square deviations: 11245233232.33846
[2025-10-11 15:54:42] 2025-10-11 19:54:04,669 | INFO     | monitor loop #1194: job 0:6837874204 is in state 'finished'
[2025-10-11 15:54:42] 2025-10-11 19:54:04,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 15:54:42] 2025-10-11 19:54:04,670 | INFO     | sum of deviations: 82893032903.24466
[2025-10-11 15:54:42] 2025-10-11 19:54:04,670 | INFO     | mean x: 1760202009.7824774
[2025-10-11 15:54:42] 2025-10-11 19:54:04,671 | INFO     | mean y: 2548744.6283987914
[2025-10-11 15:54:42] 2025-10-11 19:54:04,671 | INFO     | -- intersect: -12972591930.414267
[2025-10-11 15:54:42] 2025-10-11 19:54:04,671 | INFO     | intersect: -12972591930.414267
[2025-10-11 15:54:42] 2025-10-11 19:54:04,671 | INFO     | chi2: 2.630913852814479
[2025-10-11 15:54:42] 2025-10-11 19:54:04,672 | INFO     | current chi2=2.630913852814479 (change=38.36785984179518 %)
[2025-10-11 15:54:42] 2025-10-11 19:54:04,672 | INFO     | sum of square deviations: 10743316782.469322
[2025-10-11 15:54:42] 2025-10-11 19:54:04,683 | INFO     | sum of deviations: 82020568456.8834
[2025-10-11 15:54:42] 2025-10-11 19:54:04,683 | INFO     | mean x: 1760201857.2852762
[2025-10-11 15:54:42] 2025-10-11 19:54:04,684 | INFO     | mean y: 2548479.1840490797
[2025-10-11 15:54:42] 2025-10-11 19:54:04,684 | INFO     | -- intersect: -13435829989.6501
[2025-10-11 15:54:42] 2025-10-11 19:54:04,684 | INFO     | intersect: -13435829989.6501
[2025-10-11 15:54:42] 2025-10-11 19:54:04,704 | INFO     | chi2: 2.631684242817528
[2025-10-11 15:54:42] 2025-10-11 19:54:04,704 | INFO     | current chi2=2.631684242817528 (change=-0.029282220785183985 %)
[2025-10-11 15:54:42] 2025-10-11 19:54:04,704 | INFO     | right removable region: 325
[2025-10-11 15:54:42] 2025-10-11 19:54:04,705 | INFO     | sum of square deviations: 11245075242.33846
[2025-10-11 15:54:42] 2025-10-11 19:54:04,723 | INFO     | sum of deviations: -48069655997.55287
[2025-10-11 15:54:42] 2025-10-11 19:54:04,723 | INFO     | mean x: 1760202314.7824774
[2025-10-11 15:54:42] 2025-10-11 19:54:04,723 | INFO     | mean y: 2559857.2839879156
[2025-10-11 15:54:42] 2025-10-11 19:54:04,723 | INFO     | -- intersect: 7526948795.040395
[2025-10-11 15:54:42] 2025-10-11 19:54:04,723 | INFO     | intersect: 7526948795.040395
[2025-10-11 15:54:42] 2025-10-11 19:54:04,724 | INFO     | chi2: 1.8501300291321683
[2025-10-11 15:54:42] 2025-10-11 19:54:04,724 | INFO     | current chi2=1.8501300291321683 (change=56.6586062312934 %)
[2025-10-11 15:54:42] 2025-10-11 19:54:04,725 | INFO     | sum of square deviations: 10743061251.730082
[2025-10-11 15:54:42] 2025-10-11 19:54:04,728 | INFO     | sum of deviations: -66714938850.012245
[2025-10-11 15:54:42] 2025-10-11 19:54:04,728 | INFO     | mean x: 1760202467.2944784
[2025-10-11 15:54:42] 2025-10-11 19:54:04,728 | INFO     | mean y: 2565495.1042944784
[2025-10-11 15:54:42] 2025-10-11 19:54:04,729 | INFO     | -- intersect: 10933509405.554436
[2025-10-11 15:54:42] 2025-10-11 19:54:04,729 | INFO     | intersect: 10933509405.554436
[2025-10-11 15:54:42] 2025-10-11 19:54:04,729 | INFO     | chi2: 1.7001777449343833
[2025-10-11 15:54:42] 2025-10-11 19:54:04,730 | INFO     | current chi2=1.7001777449343833 (change=8.10495921025196 %)
[2025-10-11 15:54:42] 2025-10-11 19:54:04,730 | INFO     | left removable region: 20
[2025-10-11 15:54:42] 2025-10-11 19:54:04,730 | INFO     | sum of square deviations: 8797899555.718044
[2025-10-11 15:54:42] 2025-10-11 19:54:04,733 | INFO     | sum of deviations: -19218673170.68525
[2025-10-11 15:54:42] 2025-10-11 19:54:04,734 | INFO     | mean x: 1760202436.8163934
[2025-10-11 15:54:42] 2025-10-11 19:54:04,734 | INFO     | mean y: 2580323.5770491804
[2025-10-11 15:54:42] 2025-10-11 19:54:04,734 | INFO     | -- intersect: 3847674841.1010184
[2025-10-11 15:54:42] 2025-10-11 19:54:04,734 | INFO     | intersect: 3847674841.1010184
[2025-10-11 15:54:42] 2025-10-11 19:54:04,735 | INFO     | chi2: 0.016285402453820503
[2025-10-11 15:54:42] 2025-10-11 19:54:04,735 | INFO     | -- intersect: 3847674841.1010184
[2025-10-11 15:54:42] 2025-10-11 19:54:04,735 | INFO     | current memory leak: -2.18 B/s (using 305 data points, chi2=0.02)
[2025-10-11 15:54:42] 2025-10-11 19:54:04,736 | INFO     | could have reported an average CPU frequency of 2550 MHz (15 samples)
[2025-10-11 15:54:42] 2025-10-11 19:54:04,736 | INFO     | ..............................
[2025-10-11 15:54:42] 2025-10-11 19:54:04,736 | INFO     | . Timing measurements:
[2025-10-11 15:54:42] 2025-10-11 19:54:04,736 | INFO     | . get job = 0 s
[2025-10-11 15:54:42] 2025-10-11 19:54:04,737 | INFO     | . initial setup = 3 s
[2025-10-11 15:54:42] 2025-10-11 19:54:04,737 | INFO     | . payload setup = 27 s
[2025-10-11 15:54:42] 2025-10-11 19:54:04,737 | INFO     | . stage-in = 0 s
[2025-10-11 15:54:42] 2025-10-11 19:54:04,737 | INFO     | . payload execution = 20472 s
[2025-10-11 15:54:42] 2025-10-11 19:54:04,737 | INFO     | . stage-out = 6 s
[2025-10-11 15:54:42] 2025-10-11 19:54:04,737 | INFO     | . log creation = 1 s
[2025-10-11 15:54:42] 2025-10-11 19:54:04,737 | INFO     | ..............................
[2025-10-11 15:54:42] 2025-10-11 19:54:05,047 | INFO     | time since job start (20601s) is within the limit (172800.0s)
[2025-10-11 15:54:42] 2025-10-11 19:54:05,777 | INFO     | 
[2025-10-11 15:54:42] 2025-10-11 19:54:05,777 | INFO     | job summary report
[2025-10-11 15:54:42] 2025-10-11 19:54:05,777 | INFO     | --------------------------------------------------
[2025-10-11 15:54:42] 2025-10-11 19:54:05,777 | INFO     | PanDA job id: 6837874204
[2025-10-11 15:54:42] 2025-10-11 19:54:05,777 | INFO     | task id: 46676269
[2025-10-11 15:54:42] 2025-10-11 19:54:05,778 | INFO     | errors: (none)
[2025-10-11 15:54:42] 2025-10-11 19:54:05,778 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 15:54:42] 2025-10-11 19:54:05,778 | INFO     | pilot state: finished 
[2025-10-11 15:54:42] 2025-10-11 19:54:05,778 | INFO     | transexitcode: 0
[2025-10-11 15:54:42] 2025-10-11 19:54:05,778 | INFO     | exeerrorcode: 0
[2025-10-11 15:54:42] 2025-10-11 19:54:05,778 | INFO     | exeerrordiag: 
[2025-10-11 15:54:42] 2025-10-11 19:54:05,778 | INFO     | exitcode: 0
[2025-10-11 15:54:42] 2025-10-11 19:54:05,778 | INFO     | exitmsg: OK
[2025-10-11 15:54:42] 2025-10-11 19:54:05,779 | INFO     | cpuconsumptiontime: 57543 s
[2025-10-11 15:54:42] 2025-10-11 19:54:05,779 | INFO     | nevents: 400
[2025-10-11 15:54:42] 2025-10-11 19:54:05,779 | INFO     | neventsw: 0
[2025-10-11 15:54:42] 2025-10-11 19:54:05,779 | INFO     | pid: 659234
[2025-10-11 15:54:42] 2025-10-11 19:54:05,779 | INFO     | pgrp: 659234
[2025-10-11 15:54:42] 2025-10-11 19:54:05,779 | INFO     | corecount: 9
[2025-10-11 15:54:42] 2025-10-11 19:54:05,779 | INFO     | event service: False
[2025-10-11 15:54:42] 2025-10-11 19:54:05,779 | INFO     | sizes: {0: 2348635, 1: 2348834, 12: 2348834, 15: 2349124, 23: 2349152, 20506: 2382524, 20507: 2382651, 20516: 2391705, 20517: 2391761, 20559: 2391955}
[2025-10-11 15:54:42] 2025-10-11 19:54:05,780 | INFO     | --------------------------------------------------
[2025-10-11 15:54:42] 2025-10-11 19:54:05,780 | INFO     | 
[2025-10-11 15:54:42] 2025-10-11 19:54:05,780 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 15:54:42] 2025-10-11 19:54:05,989 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,990 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,990 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,990 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,991 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,991 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,992 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 15:54:42] 2025-10-11 19:54:05,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,992 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 15:54:42] 2025-10-11 19:54:05,992 | INFO     | job 6837874204 has completed (purged errors)
[2025-10-11 15:54:42] 2025-10-11 19:54:05,993 | INFO     | overall cleanup function is called
[2025-10-11 15:54:42] 2025-10-11 19:54:07,046 | INFO     | --- collectZombieJob: --- 10, [659234]
[2025-10-11 15:54:42] 2025-10-11 19:54:07,046 | INFO     | zombie collector waiting for pid 659234
[2025-10-11 15:54:42] 2025-10-11 19:54:07,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 15:54:42] 2025-10-11 19:54:07,047 | INFO     | collected zombie processes
[2025-10-11 15:54:42] 2025-10-11 19:54:07,047 | INFO     | will attempt to kill all subprocesses of pid=659234
[2025-10-11 15:54:42] 2025-10-11 19:54:08,437 | INFO     | process IDs to be killed: [659234] (in reverse order)
[2025-10-11 15:54:42] 2025-10-11 19:54:08,567 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 15:54:42] 2025-10-11 19:54:08,568 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 15:54:42] 2025-10-11 19:54:08,579 | INFO     | did not find any defunct processes belonging to 659234
[2025-10-11 15:54:42] 2025-10-11 19:54:08,591 | INFO     | did not find any defunct processes belonging to 659234
[2025-10-11 15:54:42] 2025-10-11 19:54:08,591 | INFO     | ready for new job
[2025-10-11 15:54:42] 2025-10-11 19:54:08,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 15:54:42] 2025-10-11 19:54:08,594 | INFO     | ***************************************
[2025-10-11 15:54:42] 2025-10-11 19:54:08,595 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 15:54:42] 2025-10-11 19:54:08,595 | INFO     | ***************************************
[2025-10-11 15:54:42] 2025-10-11 19:54:08,595 | INFO     | 
[2025-10-11 15:54:42] 2025-10-11 19:54:08,598 | INFO     | architecture information:
[2025-10-11 15:54:42] 2025-10-11 19:54:08,598 | INFO     | executing command: cat /etc/os-release
[2025-10-11 15:54:42] 2025-10-11 19:54:08,654 | INFO     | cat /etc/os-release:
[2025-10-11 15:54:42] NAME="CentOS Linux"
[2025-10-11 15:54:42] VERSION="7 (Core)"
[2025-10-11 15:54:42] ID="centos"
[2025-10-11 15:54:42] ID_LIKE="rhel fedora"
[2025-10-11 15:54:42] VERSION_ID="7"
[2025-10-11 15:54:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 15:54:42] ANSI_COLOR="0;31"
[2025-10-11 15:54:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 15:54:42] HOME_URL="https://www.centos.org/"
[2025-10-11 15:54:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 15:54:42] 
[2025-10-11 15:54:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 15:54:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 15:54:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 15:54:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 15:54:42] 
[2025-10-11 15:54:42] 2025-10-11 19:54:08,654 | INFO     | ***************************************
[2025-10-11 15:54:42] 2025-10-11 19:54:09,156 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 15:54:42] 2025-10-11 19:54:09,180 | INFO     | sufficient remaining disk space (63287853056 B)
[2025-10-11 15:54:42] 2025-10-11 19:54:09,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 15:54:42] 2025-10-11 19:54:09,180 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 15:54:42] 2025-10-11 19:54:09,180 | INFO     | update_server=False
[2025-10-11 15:54:42] 2025-10-11 19:54:09,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 15:54:42] 2025-10-11 19:54:09,184 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:54:42] 2025-10-11 19:54:09,184 | INFO     | aborting loop
[2025-10-11 15:54:42] 2025-10-11 19:54:09,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:54:42] 2025-10-11 19:54:09,527 | INFO     | all data control threads have been joined
[2025-10-11 15:54:42] 2025-10-11 19:54:09,600 | INFO     | all payload control threads have been joined
[2025-10-11 15:54:42] 2025-10-11 19:54:10,186 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:10,196 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:10,512 | INFO     | [job] validate thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:10,533 | INFO     | [data] control thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:10,580 | INFO     | all job control threads have been joined
[2025-10-11 15:54:42] 2025-10-11 19:54:10,606 | INFO     | [payload] control thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:10,728 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:10,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 15:54:42] 2025-10-11 19:54:10,970 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:11,065 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:11,134 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 15:54:42] 2025-10-11 19:54:11,151 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:11,187 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:11,237 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:11,245 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:11,453 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:11,586 | INFO     | [job] control thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:11,810 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:15,143 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:54:42] 2025-10-11 19:54:22,393 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:54:42] 2025-10-11 19:54:23,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436766639936)>', '<ExcThread(monitor, started 140436278593280)>']
[2025-10-11 15:54:42] 2025-10-11 19:54:28,622 | INFO     | all workflow threads have been joined
[2025-10-11 15:54:42] 2025-10-11 19:54:28,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:54:42] 2025-10-11 19:54:28,623 | INFO     | traces error code: 0
[2025-10-11 15:54:42] 2025-10-11 19:54:28,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:54:42] 2025-10-11 19:54:40,110 | INFO     | PID=646022 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 15:54:42] 2025-10-11 19:54:40,111 | INFO     | .. there are 15 such processes running
[2025-10-11 15:54:42] 2025-10-11 19:54:40,111 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:54:42] 2025-10-11 19:54:40,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:54:42] 2025-10-11 19:54:40,112 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:54:42] 2025-10-11 19:54:40,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:54:42] 2025-10-11 19:54:40,112 | INFO     | [monitor] control thread has ended
[2025-10-11 15:54:42] 2025-10-11 19:54:41,064 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:54:42] 2025-10-11 19:54:41,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:54:42] 2025-10-11 19:54:41,134 [wrapper] pilotpid: 646022
[2025-10-11 15:54:42] 2025-10-11 19:54:41,157 [wrapper] Pilot exit status: 0
[2025-10-11 15:54:42] 2025-10-11 19:54:41,461 [wrapper] pandaids: 6837874204 6837874204
[2025-10-11 15:54:42] 2025-10-11 19:54:41,577 [wrapper] cleanup supervisor_pilot 1220950 646023
[2025-10-11 15:54:42] 2025-10-11 19:54:41,607 [wrapper] Test setup, not cleaning
[2025-10-11 15:54:42] 2025-10-11 19:54:41,623 [wrapper] apfmon messages muted
[2025-10-11 15:54:42] 2025-10-11 19:54:41,656 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:54:42] 2025-10-11 19:54:41,685 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:54:42]  *** Error codes and diagnostics ***
[2025-10-11 15:54:42]     "exeErrorCode": 0,
[2025-10-11 15:54:42]     "exeErrorDiag": "",
[2025-10-11 15:54:42]     "pilotErrorCode": 0,
[2025-10-11 15:54:42]     "pilotErrorDiag": "",
[2025-10-11 15:54:42]  *** Listing of results directory ***
[2025-10-11 15:54:42] total 628228
[2025-10-11 15:54:42] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 18:56 pilot3.tar.gz
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 19:08 queuedata.json
[2025-10-11 15:54:42] -rwx------. 1 boincer umatlas     36292 Oct 10 19:10 runpilot2-wrapper.sh
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas       100 Oct 11 06:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:54:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 06:48 run_atlas
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas       105 Oct 11 06:48 job.xml
[2025-10-11 15:54:42] -rw-r--r--. 3 boincer umatlas 219705636 Oct 11 06:48 EVNT.46676267._001887.pool.root.1
[2025-10-11 15:54:42] -rw-r--r--. 3 boincer umatlas 219705636 Oct 11 06:48 ATLAS.root_0
[2025-10-11 15:54:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 06:48 start_atlas.sh
[2025-10-11 15:54:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 06:48 shared
[2025-10-11 15:54:42] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 06:48 input.tar.gz
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas         0 Oct 11 06:48 boinc_lockfile
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 10:10 pandaJob.out
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas    975520 Oct 11 10:10 agis_schedconf.cvmfs.json
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas      6614 Oct 11 15:47 init_data.xml
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas 193908601 Oct 11 15:51 HITS.46676269._046726.pool.root.1
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas       532 Oct 11 15:51 boinc_task_state.xml
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas      1045 Oct 11 15:53 memory_monitor_summary.json
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas   1560580 Oct 11 15:53 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas    548743 Oct 11 15:53 log.46676269._046726.job.log.tgz.1
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas        96 Oct 11 15:53 pilot_heartbeat.json
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas      7826 Oct 11 15:54 heartbeat.json
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas       822 Oct 11 15:54 pilotlog.txt
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas        29 Oct 11 15:54 wrapper_checkpoint.txt
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 15:54 boinc_mmap_file
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas   2492460 Oct 11 15:54 log.46676269._046726.job.log.1
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas       357 Oct 11 15:54 output.list
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas       620 Oct 11 15:54 runtime_log
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas   3061760 Oct 11 15:54 result.tar.gz
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas      8789 Oct 11 15:54 runtime_log.err
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas       782 Oct 11 15:54 nGHODmiQbR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnfeNDmGzYnqn.diag
[2025-10-11 15:54:42] -rw-r--r--. 1 boincer umatlas     23244 Oct 11 15:54 stderr.txt
[2025-10-11 15:54:42] HITS file was successfully produced:
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas 193908601 Oct 11 15:51 shared/HITS.pool.root.1
[2025-10-11 15:54:42]  *** Contents of shared directory: ***
[2025-10-11 15:54:42] total 407496
[2025-10-11 15:54:42] -rw-r--r--. 3 boincer umatlas 219705636 Oct 11 06:48 ATLAS.root_0
[2025-10-11 15:54:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 06:48 start_atlas.sh
[2025-10-11 15:54:42] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 06:48 input.tar.gz
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas 193908601 Oct 11 15:51 HITS.pool.root.1
[2025-10-11 15:54:42] -rw-------. 1 boincer umatlas   3061760 Oct 11 15:54 result.tar.gz
15:54:44 (636047): run_atlas exited; CPU time 58218.977824
15:54:44 (636047): called boinc_finish(0)

</stderr_txt>
]]>

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