Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:59:19 (38944): wrapper (7.7.26015): starting
23:59:19 (38944): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 23:59:19] Arguments: --nthreads 8
[2025-10-10 23:59:19] Threads: 8
[2025-10-10 23:59:19] Checking for CVMFS
[2025-10-10 23:59:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 23:59:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 23:59:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 23:59:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 23:59:20] 2.11.2.0 13817 478610 276936 151571 3 188 9550412 18432000 2749 130560 8 204179955 99.507 263717934 24850 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-10 23:59:20] CVMFS is ok
[2025-10-10 23:59:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 23:59:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 23:59:20] Further information can be found at the LHC@home message board.
[2025-10-10 23:59:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 23:59:20] Checking for apptainer binary...
[2025-10-10 23:59:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 23:59:20] Running /usr/bin/apptainer --version
[2025-10-10 23:59:20] apptainer version 1.3.2-1.el7
[2025-10-10 23:59:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 23:59:21] c-9-29.aglt2.org
[2025-10-10 23:59:21] apptainer works
[2025-10-10 23:59:21] Set ATHENA_PROC_NUMBER=8
[2025-10-10 23:59:21] Set ATHENA_CORE_NUMBER=8
[2025-10-10 23:59:21] Starting ATLAS job with PandaID=6837706618
[2025-10-10 23:59:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 02:44:52]  *** The last 200 lines of the pilot log: ***
[2025-10-11 02:44:52] 2025-10-11 06:44:10,888 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 02:44:52] 2025-10-11 06:44:10,888 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 02:44:52] 2025-10-11 06:44:10,891 | INFO     | fitting pss+swap vs Time
[2025-10-11 02:44:52] 2025-10-11 06:44:10,891 | INFO     | sum of square deviations: 1318277740.5
[2025-10-11 02:44:52] 2025-10-11 06:44:10,892 | INFO     | sum of deviations: 9316371949.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,892 | INFO     | mean x: 1760160105.5
[2025-10-11 02:44:52] 2025-10-11 06:44:10,892 | INFO     | mean y: 2446292.24691358
[2025-10-11 02:44:52] 2025-10-11 06:44:10,892 | INFO     | -- intersect: -12436742908.05733
[2025-10-11 02:44:52] 2025-10-11 06:44:10,892 | INFO     | intersect: -12436742908.05733
[2025-10-11 02:44:52] 2025-10-11 06:44:10,892 | INFO     | chi2: 2.1146837068028814
[2025-10-11 02:44:52] 2025-10-11 06:44:10,893 | INFO     | sum of square deviations: 1199940638.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,893 | INFO     | sum of deviations: 20084580437.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,893 | INFO     | mean x: 1760159953.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,893 | INFO     | mean y: 2459805.9363057325
[2025-10-11 02:44:52] 2025-10-11 06:44:10,893 | INFO     | -- intersect: -29459059404.662045
[2025-10-11 02:44:52] 2025-10-11 06:44:10,894 | INFO     | intersect: -29459059404.662045
[2025-10-11 02:44:52] 2025-10-11 06:44:10,894 | INFO     | chi2: 1.2383519252694806
[2025-10-11 02:44:52] 2025-10-11 06:44:10,894 | INFO     | current chi2=1.2383519252694806 (change=41.44032408791276 %)
[2025-10-11 02:44:52] 2025-10-11 06:44:10,894 | INFO     | sum of square deviations: 1088905998.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,895 | INFO     | sum of deviations: 19397899197.500008
[2025-10-11 02:44:52] 2025-10-11 06:44:10,895 | INFO     | mean x: 1760159800.5
[2025-10-11 02:44:52] 2025-10-11 06:44:10,895 | INFO     | mean y: 2458862.611842105
[2025-10-11 02:44:52] 2025-10-11 06:44:10,895 | INFO     | -- intersect: -31353234323.303295
[2025-10-11 02:44:52] 2025-10-11 06:44:10,895 | INFO     | intersect: -31353234323.303295
[2025-10-11 02:44:52] 2025-10-11 06:44:10,895 | INFO     | chi2: 1.2392775906076738
[2025-10-11 02:44:52] 2025-10-11 06:44:10,895 | INFO     | current chi2=1.2392775906076738 (change=-0.07474977987310312 %)
[2025-10-11 02:44:52] 2025-10-11 06:44:10,895 | INFO     | right removable region: 151
[2025-10-11 02:44:52] 2025-10-11 06:44:10,896 | INFO     | sum of square deviations: 1199940638.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,896 | INFO     | sum of deviations: -11883649059.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,896 | INFO     | mean x: 1760160258.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,896 | INFO     | mean y: 2473218.0382165606
[2025-10-11 02:44:52] 2025-10-11 06:44:10,897 | INFO     | -- intersect: 17434274534.922108
[2025-10-11 02:44:52] 2025-10-11 06:44:10,897 | INFO     | intersect: 17434274534.922108
[2025-10-11 02:44:52] 2025-10-11 06:44:10,897 | INFO     | chi2: 0.9079393558441214
[2025-10-11 02:44:52] 2025-10-11 06:44:10,897 | INFO     | current chi2=0.9079393558441214 (change=57.06500442958421 %)
[2025-10-11 02:44:52] 2025-10-11 06:44:10,897 | INFO     | sum of square deviations: 1088905998.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,899 | INFO     | sum of deviations: -10909546250.500002
[2025-10-11 02:44:52] 2025-10-11 06:44:10,899 | INFO     | mean x: 1760160410.5
[2025-10-11 02:44:52] 2025-10-11 06:44:10,899 | INFO     | mean y: 2471865.835526316
[2025-10-11 02:44:52] 2025-10-11 06:44:10,899 | INFO     | -- intersect: 17637190970.990845
[2025-10-11 02:44:52] 2025-10-11 06:44:10,899 | INFO     | intersect: 17637190970.990845
[2025-10-11 02:44:52] 2025-10-11 06:44:10,900 | INFO     | chi2: 0.907706318949646
[2025-10-11 02:44:52] 2025-10-11 06:44:10,900 | INFO     | current chi2=0.907706318949646 (change=0.025666570457092412 %)
[2025-10-11 02:44:52] 2025-10-11 06:44:10,900 | INFO     | left removable region: 20
[2025-10-11 02:44:52] 2025-10-11 06:44:10,900 | INFO     | sum of square deviations: 697054930.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,901 | INFO     | sum of deviations: 1876895214.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,901 | INFO     | mean x: 1760160380.0
[2025-10-11 02:44:52] 2025-10-11 06:44:10,902 | INFO     | mean y: 2483373.748091603
[2025-10-11 02:44:52] 2025-10-11 06:44:10,902 | INFO     | -- intersect: -4736937367.590645
[2025-10-11 02:44:52] 2025-10-11 06:44:10,902 | INFO     | intersect: -4736937367.590645
[2025-10-11 02:44:52] 2025-10-11 06:44:10,902 | INFO     | chi2: 0.000481823636747316
[2025-10-11 02:44:52] 2025-10-11 06:44:10,902 | INFO     | -- intersect: -4736937367.590645
[2025-10-11 02:44:52] 2025-10-11 06:44:10,903 | INFO     | current memory leak: 2.69 B/s (using 131 data points, chi2=0.00)
[2025-10-11 02:44:52] 2025-10-11 06:44:10,903 | INFO     | could have reported an average CPU frequency of 2999 MHz (9 samples)
[2025-10-11 02:44:52] 2025-10-11 06:44:10,903 | INFO     | ..............................
[2025-10-11 02:44:52] 2025-10-11 06:44:10,903 | INFO     | . Timing measurements:
[2025-10-11 02:44:52] 2025-10-11 06:44:10,904 | INFO     | . get job = 0 s
[2025-10-11 02:44:52] 2025-10-11 06:44:10,904 | INFO     | . initial setup = 2 s
[2025-10-11 02:44:52] 2025-10-11 06:44:10,904 | INFO     | . payload setup = 4 s
[2025-10-11 02:44:52] 2025-10-11 06:44:10,904 | INFO     | . stage-in = 0 s
[2025-10-11 02:44:52] 2025-10-11 06:44:10,904 | INFO     | . payload execution = 9848 s
[2025-10-11 02:44:52] 2025-10-11 06:44:10,904 | INFO     | . stage-out = 0 s
[2025-10-11 02:44:52] 2025-10-11 06:44:10,905 | INFO     | . log creation = 0 s
[2025-10-11 02:44:52] 2025-10-11 06:44:10,905 | INFO     | ..............................
[2025-10-11 02:44:52] 2025-10-11 06:44:11,490 | INFO     | 
[2025-10-11 02:44:52] 2025-10-11 06:44:11,490 | INFO     | job summary report
[2025-10-11 02:44:52] 2025-10-11 06:44:11,490 | INFO     | --------------------------------------------------
[2025-10-11 02:44:52] 2025-10-11 06:44:11,490 | INFO     | PanDA job id: 6837706618
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | task id: 46676269
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | errors: (none)
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | pilot state: finished 
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | transexitcode: 0
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | exeerrorcode: 0
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | exeerrordiag: 
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | exitcode: 0
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | exitmsg: OK
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | cpuconsumptiontime: 75018 s
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | nevents: 400
[2025-10-11 02:44:52] 2025-10-11 06:44:11,491 | INFO     | neventsw: 0
[2025-10-11 02:44:52] 2025-10-11 06:44:11,492 | INFO     | pid: 49032
[2025-10-11 02:44:52] 2025-10-11 06:44:11,492 | INFO     | pgrp: 49032
[2025-10-11 02:44:52] 2025-10-11 06:44:11,492 | INFO     | corecount: 8
[2025-10-11 02:44:52] 2025-10-11 06:44:11,492 | INFO     | event service: False
[2025-10-11 02:44:52] 2025-10-11 06:44:11,492 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 12: 2349175, 9857: 2377739, 9858: 2386737, 9861: 2386921, 9865: 2387179}
[2025-10-11 02:44:52] 2025-10-11 06:44:11,492 | INFO     | --------------------------------------------------
[2025-10-11 02:44:52] 2025-10-11 06:44:11,492 | INFO     | 
[2025-10-11 02:44:52] 2025-10-11 06:44:11,492 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 02:44:52] 2025-10-11 06:44:11,507 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,507 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,507 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,507 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,508 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 02:44:52] 2025-10-11 06:44:11,509 | INFO     | job 6837706618 has completed (purged errors)
[2025-10-11 02:44:52] 2025-10-11 06:44:11,509 | INFO     | overall cleanup function is called
[2025-10-11 02:44:52] 2025-10-11 06:44:12,516 | INFO     | --- collectZombieJob: --- 10, [49032]
[2025-10-11 02:44:52] 2025-10-11 06:44:12,516 | INFO     | zombie collector waiting for pid 49032
[2025-10-11 02:44:52] 2025-10-11 06:44:12,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 02:44:52] 2025-10-11 06:44:12,517 | INFO     | collected zombie processes
[2025-10-11 02:44:52] 2025-10-11 06:44:12,517 | INFO     | will attempt to kill all subprocesses of pid=49032
[2025-10-11 02:44:52] 2025-10-11 06:44:12,723 | INFO     | process IDs to be killed: [49032] (in reverse order)
[2025-10-11 02:44:52] 2025-10-11 06:44:12,773 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 02:44:52] 2025-10-11 06:44:12,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 02:44:52] 2025-10-11 06:44:12,781 | INFO     | did not find any defunct processes belonging to 49032
[2025-10-11 02:44:52] 2025-10-11 06:44:12,788 | INFO     | did not find any defunct processes belonging to 49032
[2025-10-11 02:44:52] 2025-10-11 06:44:12,788 | INFO     | ready for new job
[2025-10-11 02:44:52] 2025-10-11 06:44:12,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 02:44:52] 2025-10-11 06:44:12,790 | INFO     | ***************************************
[2025-10-11 02:44:52] 2025-10-11 06:44:12,790 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 02:44:52] 2025-10-11 06:44:12,790 | INFO     | ***************************************
[2025-10-11 02:44:52] 2025-10-11 06:44:12,791 | INFO     | 
[2025-10-11 02:44:52] 2025-10-11 06:44:12,792 | INFO     | architecture information:
[2025-10-11 02:44:52] 2025-10-11 06:44:12,793 | INFO     | executing command: cat /etc/os-release
[2025-10-11 02:44:52] 2025-10-11 06:44:12,805 | INFO     | cat /etc/os-release:
[2025-10-11 02:44:52] NAME="CentOS Linux"
[2025-10-11 02:44:52] VERSION="7 (Core)"
[2025-10-11 02:44:52] ID="centos"
[2025-10-11 02:44:52] ID_LIKE="rhel fedora"
[2025-10-11 02:44:52] VERSION_ID="7"
[2025-10-11 02:44:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 02:44:52] ANSI_COLOR="0;31"
[2025-10-11 02:44:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 02:44:52] HOME_URL="https://www.centos.org/"
[2025-10-11 02:44:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 02:44:52] 
[2025-10-11 02:44:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 02:44:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 02:44:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 02:44:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 02:44:52] 
[2025-10-11 02:44:52] 2025-10-11 06:44:12,805 | INFO     | ***************************************
[2025-10-11 02:44:52] 2025-10-11 06:44:13,308 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 02:44:52] 2025-10-11 06:44:13,320 | INFO     | sufficient remaining disk space (104432926720 B)
[2025-10-11 02:44:52] 2025-10-11 06:44:13,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 02:44:52] 2025-10-11 06:44:13,320 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 02:44:52] 2025-10-11 06:44:13,320 | INFO     | update_server=False
[2025-10-11 02:44:52] 2025-10-11 06:44:13,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 02:44:52] 2025-10-11 06:44:13,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:44:52] 2025-10-11 06:44:13,321 | INFO     | aborting loop
[2025-10-11 02:44:52] 2025-10-11 06:44:13,567 | INFO     | all job control threads have been joined
[2025-10-11 02:44:52] 2025-10-11 06:44:13,639 | INFO     | all data control threads have been joined
[2025-10-11 02:44:52] 2025-10-11 06:44:13,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 02:44:52] 2025-10-11 06:44:14,325 | INFO     | [job] retrieve thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:14,326 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:14,326 | INFO     | [job] job monitor thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:14,327 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:14,372 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:14,572 | INFO     | [job] control thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:14,643 | INFO     | [data] control thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:14,712 | INFO     | all payload control threads have been joined
[2025-10-11 02:44:52] 2025-10-11 06:44:14,722 | INFO     | [payload] failed_post thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:14,751 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:14,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 02:44:52] 2025-10-11 06:44:15,006 | INFO     | [data] copytool_in thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:15,193 | INFO     | [payload] validate_post thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:15,496 | INFO     | [job] validate thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:15,717 | INFO     | [payload] control thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:16,063 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:44:52] 2025-10-11 06:44:16,813 | INFO     | [data] copytool_out thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:17,068 | INFO     | [job] queue monitor thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:17,716 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 02:44:52] 2025-10-11 06:44:29,143 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-11 02:44:52] 2025-10-11 06:44:44,020 | INFO     | PID=42636 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-11 02:44:52] 2025-10-11 06:44:44,020 | INFO     | .. there are 4 such processes running
[2025-10-11 02:44:52] 2025-10-11 06:44:44,021 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 02:44:52] 2025-10-11 06:44:44,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 02:44:52] 2025-10-11 06:44:44,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 02:44:52] 2025-10-11 06:44:47,211 | INFO     | [monitor] cgroup control has ended
[2025-10-11 02:44:52] 2025-10-11 06:44:47,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140477575317312)>', '<ExcThread(monitor, started 140477122713344)>']
[2025-10-11 02:44:52] 2025-10-11 06:44:48,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 02:44:52] 2025-10-11 06:44:48,039 | INFO     | [monitor] control thread has ended
[2025-10-11 02:44:52] 2025-10-11 06:44:52,309 | INFO     | all workflow threads have been joined
[2025-10-11 02:44:52] 2025-10-11 06:44:52,309 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 02:44:52] 2025-10-11 06:44:52,310 | INFO     | traces error code: 0
[2025-10-11 02:44:52] 2025-10-11 06:44:52,310 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 02:44:52] 2025-10-11 06:44:52,403 [wrapper] ==== pilot stdout END ====
[2025-10-11 02:44:52] 2025-10-11 06:44:52,405 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 02:44:52] 2025-10-11 06:44:52,407 [wrapper] pilotpid: 42636
[2025-10-11 02:44:52] 2025-10-11 06:44:52,409 [wrapper] Pilot exit status: 0
[2025-10-11 02:44:52] 2025-10-11 06:44:52,417 [wrapper] pandaids: 6837706618
[2025-10-11 02:44:52] 2025-10-11 06:44:52,449 [wrapper] cleanup supervisor_pilot 10758 42637
[2025-10-11 02:44:52] 2025-10-11 06:44:52,452 [wrapper] Test setup, not cleaning
[2025-10-11 02:44:52] 2025-10-11 06:44:52,454 [wrapper] apfmon messages muted
[2025-10-11 02:44:52] 2025-10-11 06:44:52,456 [wrapper] ==== wrapper stdout END ====
[2025-10-11 02:44:52] 2025-10-11 06:44:52,458 [wrapper] ==== wrapper stderr END ====
[2025-10-11 02:44:52]  *** Error codes and diagnostics ***
[2025-10-11 02:44:52]     "exeErrorCode": 0,
[2025-10-11 02:44:52]     "exeErrorDiag": "",
[2025-10-11 02:44:52]     "pilotErrorCode": 0,
[2025-10-11 02:44:52]     "pilotErrorDiag": "",
[2025-10-11 02:44:52]  *** Listing of results directory ***
[2025-10-11 02:44:52] total 412684
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 14:07 pilot3.tar.gz
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 14:13 queuedata.json
[2025-10-11 02:44:52] -rwx------ 1 boincer umatlas     36292 Oct 10 14:13 runpilot2-wrapper.sh
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas       100 Oct 10 23:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 02:44:52] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 23:59 run_atlas
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas       105 Oct 10 23:59 job.xml
[2025-10-11 02:44:52] -rw-r--r-- 2 boincer umatlas 221021200 Oct 10 23:59 EVNT.46676267._001739.pool.root.1
[2025-10-11 02:44:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 23:59 start_atlas.sh
[2025-10-11 02:44:52] drwxrwx--x 2 boincer umatlas      4096 Oct 10 23:59 shared
[2025-10-11 02:44:52] -rw-r--r-- 2 boincer umatlas    569683 Oct 10 23:59 input.tar.gz
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas         0 Oct 10 23:59 boinc_lockfile
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas      2550 Oct 10 23:59 pandaJob.out
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas    975509 Oct 10 23:59 agis_schedconf.cvmfs.json
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas   1560580 Oct 10 23:59 agis_ddmendpoints.agis.ALL.json
[2025-10-11 02:44:52] drwx------ 5 boincer umatlas      4096 Oct 10 23:59 pilot3
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas      6035 Oct 11 02:38 init_data.xml
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas 194099090 Oct 11 02:43 HITS.46676269._042951.pool.root.1
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas       529 Oct 11 02:43 boinc_task_state.xml
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas      1043 Oct 11 02:43 memory_monitor_summary.json
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas    405793 Oct 11 02:44 log.46676269._042951.job.log.tgz.1
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas      7822 Oct 11 02:44 heartbeat.json
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas        27 Oct 11 02:44 wrapper_checkpoint.txt
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 02:44 boinc_mmap_file
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas        95 Oct 11 02:44 pilot_heartbeat.json
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas      4822 Oct 11 02:44 pilotlog.txt
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas   1374382 Oct 11 02:44 log.46676269._042951.job.log.1
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas       357 Oct 11 02:44 output.list
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas       620 Oct 11 02:44 runtime_log
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas   1802240 Oct 11 02:44 result.tar.gz
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas      8693 Oct 11 02:44 runtime_log.err
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas       655 Oct 11 02:44 2TzMDmtnWR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5MQMDmsr2Xmm.diag
[2025-10-11 02:44:52] -rw-r--r-- 1 boincer umatlas     20871 Oct 11 02:44 stderr.txt
[2025-10-11 02:44:52] HITS file was successfully produced:
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas 194099090 Oct 11 02:43 shared/HITS.pool.root.1
[2025-10-11 02:44:52]  *** Contents of shared directory: ***
[2025-10-11 02:44:52] total 407736
[2025-10-11 02:44:52] -rw-r--r-- 2 boincer umatlas 221021200 Oct 10 23:59 ATLAS.root_0
[2025-10-11 02:44:52] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 23:59 start_atlas.sh
[2025-10-11 02:44:52] -rw-r--r-- 2 boincer umatlas    569683 Oct 10 23:59 input.tar.gz
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas 194099090 Oct 11 02:43 HITS.pool.root.1
[2025-10-11 02:44:52] -rw------- 1 boincer umatlas   1802240 Oct 11 02:44 result.tar.gz
02:44:54 (38944): run_atlas exited; CPU time 75227.995232
02:44:54 (38944): called boinc_finish(0)

</stderr_txt>
]]>

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