Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:10:19 (3386075): wrapper (7.7.26015): starting
19:10:19 (3386075): wrapper: running run_atlas (--nthreads 2)
[2025-10-11 19:10:19] Arguments: --nthreads 2
[2025-10-11 19:10:19] Threads: 2
[2025-10-11 19:10:19] Checking for CVMFS
[2025-10-11 19:10:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:10:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:10:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:10:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:10:19] 2.9.2.0 1618978 7518 60344 151590 1 57 3960002 36864001 0 130560 0 4667037 99.988 257943 936 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 19:10:19] CVMFS is ok
[2025-10-11 19:10:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 19:10:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 19:10:19] Further information can be found at the LHC@home message board.
[2025-10-11 19:10:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:10:19] Checking for apptainer binary...
[2025-10-11 19:10:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:10:19] Running /usr/bin/apptainer --version
[2025-10-11 19:10:19] apptainer version 1.4.1-1.1
[2025-10-11 19:10:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:10:20] atlasA210
[2025-10-11 19:10:20] apptainer works
[2025-10-11 19:10:20] Set ATHENA_PROC_NUMBER=2
[2025-10-11 19:10:20] Set ATHENA_CORE_NUMBER=2
[2025-10-11 19:10:20] Starting ATLAS job with PandaID=6826449651
[2025-10-11 19:10:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 21:47:52]  *** The last 200 lines of the pilot log: ***
[2025-10-11 21:47:52] 2025-10-11 19:46:58,882 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 21:47:52] 2025-10-11 19:46:58,883 | INFO     | fitting pss+swap vs Time
[2025-10-11 21:47:52] 2025-10-11 19:46:58,884 | INFO     | sum of square deviations: 1132458442.5
[2025-10-11 21:47:52] 2025-10-11 19:46:58,884 | INFO     | sum of deviations: 10779389879.499996
[2025-10-11 21:47:52] 2025-10-11 19:46:58,884 | INFO     | mean x: 1760207328.5
[2025-10-11 21:47:52] 2025-10-11 19:46:58,884 | INFO     | mean y: 2267568.75974026
[2025-10-11 21:47:52] 2025-10-11 19:46:58,884 | INFO     | -- intersect: -16752396753.19804
[2025-10-11 21:47:52] 2025-10-11 19:46:58,884 | INFO     | intersect: -16752396753.19804
[2025-10-11 21:47:52] 2025-10-11 19:46:58,884 | INFO     | chi2: 1.9919472456553955
[2025-10-11 21:47:52] 2025-10-11 19:46:58,884 | INFO     | sum of square deviations: 1025693650.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | sum of deviations: 18849794220.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | mean x: 1760207176.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | mean y: 2278776.724832215
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | -- intersect: -32346115943.440712
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | intersect: -32346115943.440712
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | chi2: 1.352612761229144
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | current chi2=1.352612761229144 (change=32.095954640399924 %)
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | sum of square deviations: 925859220.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | sum of deviations: 18256461036.5
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | mean x: 1760207023.5
[2025-10-11 21:47:52] 2025-10-11 19:46:58,885 | INFO     | mean y: 2277870.0069444445
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | -- intersect: -34706185626.96119
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | intersect: -34706185626.96119
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | chi2: 1.3537489498727162
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | current chi2=1.3537489498727162 (change=-0.08399955080563094 %)
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | right removable region: 143
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | sum of square deviations: 1025693650.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | sum of deviations: -5070273213.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | mean x: 1760207481.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | mean y: 2289658.6711409395
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | -- intersect: 8703457731.84436
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | intersect: 8703457731.84436
[2025-10-11 21:47:52] 2025-10-11 19:46:58,886 | INFO     | chi2: 0.6638086546626176
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | current chi2=0.6638086546626176 (change=66.67538981715303 %)
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | sum of square deviations: 925859220.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | sum of deviations: -5777151034.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | mean x: 1760207633.5
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | mean y: 2290734.75
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | -- intersect: 10985586175.637026
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | intersect: 10985586175.637026
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | chi2: 0.6628844968165829
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | current chi2=0.6628844968165829 (change=0.13922051777171068 %)
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | left removable region: 20
[2025-10-11 21:47:52] 2025-10-11 19:46:58,887 | INFO     | sum of square deviations: 576985702.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | sum of deviations: 1375616062.9999998
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | mean x: 1760207603.0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | mean y: 2305276.951219512
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | -- intersect: -4194280261.491684
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | intersect: -4194280261.491684
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | chi2: 0.0018501197908435355
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | -- intersect: -4194280261.491684
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | current memory leak: 2.38 B/s (using 123 data points, chi2=0.00)
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | could have reported an average CPU frequency of 4464 MHz (9 samples)
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | ..............................
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | . Timing measurements:
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | . get job = 0 s
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | . initial setup = 1 s
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | . payload setup = 8 s
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | . stage-in = 0 s
[2025-10-11 21:47:52] 2025-10-11 19:46:58,888 | INFO     | . payload execution = 9344 s
[2025-10-11 21:47:52] 2025-10-11 19:46:58,889 | INFO     | . stage-out = 0 s
[2025-10-11 21:47:52] 2025-10-11 19:46:58,889 | INFO     | . log creation = 0 s
[2025-10-11 21:47:52] 2025-10-11 19:46:58,889 | INFO     | ..............................
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | 
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | job summary report
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | --------------------------------------------------
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | PanDA job id: 6826449651
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | task id: 46373048
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | errors: (none)
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | pilot state: finished 
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | transexitcode: 0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | exeerrorcode: 0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | exeerrordiag: 
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | exitcode: 0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | exitmsg: OK
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | cpuconsumptiontime: 18320 s
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | nevents: 400
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | neventsw: 0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | pid: 3396198
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | pgrp: 3396198
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | corecount: 2
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | event service: False
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | sizes: {0: 2348844, 7: 2349106, 10: 2349134, 9355: 2377646, 9356: 2386705, 9359: 2386705, 9367: 2387119}
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | --------------------------------------------------
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | 
[2025-10-11 21:47:52] 2025-10-11 19:46:58,923 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 21:47:52] 2025-10-11 19:46:58,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 21:47:52] 2025-10-11 19:46:58,935 | INFO     | job 6826449651 has completed (purged errors)
[2025-10-11 21:47:52] 2025-10-11 19:46:58,935 | INFO     | overall cleanup function is called
[2025-10-11 21:47:52] 2025-10-11 19:46:59,941 | INFO     | --- collectZombieJob: --- 10, [3396198]
[2025-10-11 21:47:52] 2025-10-11 19:46:59,941 | INFO     | zombie collector waiting for pid 3396198
[2025-10-11 21:47:52] 2025-10-11 19:46:59,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 21:47:52] 2025-10-11 19:46:59,942 | INFO     | collected zombie processes
[2025-10-11 21:47:52] 2025-10-11 19:46:59,942 | INFO     | will attempt to kill all subprocesses of pid=3396198
[2025-10-11 21:47:52] 2025-10-11 19:46:59,974 | INFO     | process IDs to be killed: [3396198] (in reverse order)
[2025-10-11 21:47:52] 2025-10-11 19:46:59,994 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 21:47:52] 2025-10-11 19:46:59,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 21:47:52] 2025-10-11 19:46:59,995 | INFO     | did not find any defunct processes belonging to 3396198
[2025-10-11 21:47:52] 2025-10-11 19:46:59,996 | INFO     | did not find any defunct processes belonging to 3396198
[2025-10-11 21:47:52] 2025-10-11 19:46:59,996 | INFO     | ready for new job
[2025-10-11 21:47:52] 2025-10-11 19:46:59,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 21:47:52] 2025-10-11 19:46:59,997 | INFO     | ***************************************
[2025-10-11 21:47:52] 2025-10-11 19:46:59,997 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-11 21:47:52] 2025-10-11 19:46:59,997 | INFO     | ***************************************
[2025-10-11 21:47:52] 2025-10-11 19:46:59,997 | INFO     | 
[2025-10-11 21:47:52] 2025-10-11 19:46:59,997 | INFO     | architecture information:
[2025-10-11 21:47:52] 2025-10-11 19:46:59,997 | INFO     | executing command: cat /etc/os-release
[2025-10-11 21:47:52] 2025-10-11 19:47:00,005 | INFO     | cat /etc/os-release:
[2025-10-11 21:47:52] NAME="CentOS Linux"
[2025-10-11 21:47:52] VERSION="7 (Core)"
[2025-10-11 21:47:52] ID="centos"
[2025-10-11 21:47:52] ID_LIKE="rhel fedora"
[2025-10-11 21:47:52] VERSION_ID="7"
[2025-10-11 21:47:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 21:47:52] ANSI_COLOR="0;31"
[2025-10-11 21:47:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 21:47:52] HOME_URL="https://www.centos.org/"
[2025-10-11 21:47:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 21:47:52] 
[2025-10-11 21:47:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 21:47:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 21:47:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 21:47:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 21:47:52] 
[2025-10-11 21:47:52] 2025-10-11 19:47:00,005 | INFO     | ***************************************
[2025-10-11 21:47:52] 2025-10-11 19:47:00,508 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-11 21:47:52] 2025-10-11 19:47:00,521 | INFO     | sufficient remaining disk space (206253850624 B)
[2025-10-11 21:47:52] 2025-10-11 19:47:00,521 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 21:47:52] 2025-10-11 19:47:00,521 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 21:47:52] 2025-10-11 19:47:00,521 | INFO     | update_server=False
[2025-10-11 21:47:52] 2025-10-11 19:47:00,521 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 21:47:52] 2025-10-11 19:47:00,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:47:52] 2025-10-11 19:47:00,554 | INFO     | all payload control threads have been joined
[2025-10-11 21:47:52] 2025-10-11 19:47:00,680 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 21:47:52] 2025-10-11 19:47:00,968 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 21:47:52] 2025-10-11 19:47:00,968 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 21:47:52] 2025-10-11 19:47:00,969 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 21:47:52] 2025-10-11 19:47:00,969 | INFO     | will abort loop
[2025-10-11 21:47:52] 2025-10-11 19:47:01,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 21:47:52] 2025-10-11 19:47:01,458 | INFO     | all data control threads have been joined
[2025-10-11 21:47:52] 2025-10-11 19:47:01,527 | INFO     | [job] retrieve thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:01,527 | INFO     | [job] queue monitor thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:01,560 | INFO     | [payload] control thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:01,975 | INFO     | [job] job monitor thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:02,044 | INFO     | all job control threads have been joined
[2025-10-11 21:47:52] 2025-10-11 19:47:02,140 | INFO     | [payload] failed_post thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:02,268 | INFO     | [data] copytool_in thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:02,464 | INFO     | [data] control thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:02,595 | INFO     | [job] validate thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:02,635 | INFO     | [payload] validate_post thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:02,687 | INFO     | [data] copytool_out thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:02,773 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:02,932 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:03,026 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:03,050 | INFO     | [job] control thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:05,400 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:11,285 | INFO     | job.realtimelogging is not enabled
[2025-10-11 21:47:52] 2025-10-11 19:47:12,291 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 21:47:52] 2025-10-11 19:47:30,295 | INFO     | PID=3389784 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 21:47:52] 2025-10-11 19:47:30,295 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 21:47:52] 2025-10-11 19:47:30,296 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 21:47:52] 2025-10-11 19:47:30,296 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 21:47:52] 2025-10-11 19:47:47,234 | INFO     | [monitor] cgroup control has ended
[2025-10-11 21:47:52] 2025-10-11 19:47:47,480 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923339515712)>', '<ExcThread(monitor, started 139922719635200)>']
[2025-10-11 21:47:52] 2025-10-11 19:47:48,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 21:47:52] 2025-10-11 19:47:48,389 | INFO     | [monitor] control thread has ended
[2025-10-11 21:47:52] 2025-10-11 19:47:52,506 | INFO     | all workflow threads have been joined
[2025-10-11 21:47:52] 2025-10-11 19:47:52,507 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 21:47:52] 2025-10-11 19:47:52,507 | INFO     | traces error code: 0
[2025-10-11 21:47:52] 2025-10-11 19:47:52,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 21:47:52] 2025-10-11 19:47:52,550 [wrapper] ==== pilot stdout END ====
[2025-10-11 21:47:52] 2025-10-11 19:47:52,552 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 21:47:52] 2025-10-11 19:47:52,555 [wrapper] pilotpid: 3389784
[2025-10-11 21:47:52] 2025-10-11 19:47:52,557 [wrapper] Pilot exit status: 0
[2025-10-11 21:47:52] 2025-10-11 19:47:52,563 [wrapper] pandaids: 6826449651
[2025-10-11 21:47:52] 2025-10-11 19:47:52,578 [wrapper] cleanup supervisor_pilot 3413502 3389785
[2025-10-11 21:47:52] 2025-10-11 19:47:52,580 [wrapper] Test setup, not cleaning
[2025-10-11 21:47:52] 2025-10-11 19:47:52,582 [wrapper] apfmon messages muted
[2025-10-11 21:47:52] 2025-10-11 19:47:52,585 [wrapper] ==== wrapper stdout END ====
[2025-10-11 21:47:52] 2025-10-11 19:47:52,587 [wrapper] ==== wrapper stderr END ====
[2025-10-11 21:47:52]  *** Error codes and diagnostics ***
[2025-10-11 21:47:52]     "exeErrorCode": 0,
[2025-10-11 21:47:52]     "exeErrorDiag": "",
[2025-10-11 21:47:52]     "pilotErrorCode": 0,
[2025-10-11 21:47:52]     "pilotErrorDiag": "",
[2025-10-11 21:47:52]  *** Listing of results directory ***
[2025-10-11 21:47:52] total 413580
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc    552446 Oct  1 14:55 pilot3.tar.gz
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc      5112 Oct  1 15:31 queuedata.json
[2025-10-11 21:47:52] -rwx------ 1 boinc boinc     36292 Oct  1 15:31 runpilot2-wrapper.sh
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc       100 Oct 11 19:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 21:47:52] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 19:10 run_atlas
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc       105 Oct 11 19:10 job.xml
[2025-10-11 21:47:52] -rw-r--r-- 2 boinc boinc 221788252 Oct 11 19:10 EVNT.46373045._002802.pool.root.1
[2025-10-11 21:47:52] drwxrwx--x 2 boinc boinc      4096 Oct 11 19:10 shared
[2025-10-11 21:47:52] -rw-r--r-- 2 boinc boinc    565602 Oct 11 19:10 input.tar.gz
[2025-10-11 21:47:52] -rw-r--r-- 2 boinc boinc     15120 Oct 11 19:10 start_atlas.sh
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc         0 Oct 11 19:10 boinc_setup_complete
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc      6209 Oct 11 19:10 init_data.xml
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc         0 Oct 11 19:10 boinc_lockfile
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc      2538 Oct 11 19:10 pandaJob.out
[2025-10-11 21:47:52] -rw------- 1 boinc boinc    975512 Oct 11 19:10 agis_schedconf.cvmfs.json
[2025-10-11 21:47:52] -rw------- 1 boinc boinc   1560580 Oct 11 19:10 agis_ddmendpoints.agis.ALL.json
[2025-10-11 21:47:52] drwx------ 4 boinc boinc      4096 Oct 11 19:10 pilot3
[2025-10-11 21:47:52] -rw------- 1 boinc boinc 194560917 Oct 11 21:46 HITS.46373048._082860.pool.root.1
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc       529 Oct 11 21:46 boinc_task_state.xml
[2025-10-11 21:47:52] -rw------- 1 boinc boinc      1015 Oct 11 21:46 memory_monitor_summary.json
[2025-10-11 21:47:52] -rw------- 1 boinc boinc    298081 Oct 11 21:46 log.46373048._082860.job.log.tgz.1
[2025-10-11 21:47:52] -rw------- 1 boinc boinc      7766 Oct 11 21:46 heartbeat.json
[2025-10-11 21:47:52] -rw------- 1 boinc boinc        95 Oct 11 21:47 pilot_heartbeat.json
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc      8192 Oct 11 21:47 boinc_mmap_file
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc        27 Oct 11 21:47 wrapper_checkpoint.txt
[2025-10-11 21:47:52] -rw------- 1 boinc boinc      5010 Oct 11 21:47 pilotlog.txt
[2025-10-11 21:47:52] -rw------- 1 boinc boinc   1335882 Oct 11 21:47 log.46373048._082860.job.log.1
[2025-10-11 21:47:52] -rw------- 1 boinc boinc       357 Oct 11 21:47 output.list
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc       620 Oct 11 21:47 runtime_log
[2025-10-11 21:47:52] -rw------- 1 boinc boinc   1648640 Oct 11 21:47 result.tar.gz
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc      8792 Oct 11 21:47 runtime_log.err
[2025-10-11 21:47:52] -rw------- 1 boinc boinc       662 Oct 11 21:47 cTfLDmS6BO8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbv7LDmi4tcAn.diag
[2025-10-11 21:47:52] -rw-r--r-- 1 boinc boinc     20875 Oct 11 21:47 stderr.txt
[2025-10-11 21:47:52] HITS file was successfully produced:
[2025-10-11 21:47:52] -rw------- 1 boinc boinc 194560917 Oct 11 21:46 shared/HITS.pool.root.1
[2025-10-11 21:47:52]  *** Contents of shared directory: ***
[2025-10-11 21:47:52] total 408784
[2025-10-11 21:47:52] -rw-r--r-- 2 boinc boinc 221788252 Oct 11 19:10 ATLAS.root_0
[2025-10-11 21:47:52] -rw-r--r-- 2 boinc boinc    565602 Oct 11 19:10 input.tar.gz
[2025-10-11 21:47:52] -rw-r--r-- 2 boinc boinc     15120 Oct 11 19:10 start_atlas.sh
[2025-10-11 21:47:52] -rw------- 1 boinc boinc 194560917 Oct 11 21:46 HITS.pool.root.1
[2025-10-11 21:47:52] -rw------- 1 boinc boinc   1648640 Oct 11 21:47 result.tar.gz
21:47:53 (3386075): run_atlas exited; CPU time 18358.014377
21:47:53 (3386075): called boinc_finish(0)

</stderr_txt>
]]>

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