Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:51 (1790885): wrapper (7.7.26015): starting
00:03:51 (1790885): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 00:03:51] Arguments: --nthreads 8
[2025-10-11 00:03:51] Threads: 8
[2025-10-11 00:03:51] Checking for CVMFS
[2025-10-11 00:03:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:03:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:03:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:03:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:03:54] 2.13.2.0 3608313 127300 282636 151571 1 607 31053256 32935937 22056 16776704 0 176283348 99.614 192293563 29394 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:03:54] CVMFS is ok
[2025-10-11 00:03:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:03:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:03:54] Further information can be found at the LHC@home message board.
[2025-10-11 00:03:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:03:54] Checking for apptainer binary...
[2025-10-11 00:03:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:03:54] Running /usr/bin/apptainer --version
[2025-10-11 00:03:54] apptainer version 1.4.3-1.el9
[2025-10-11 00:03:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:03:55] c6-6-39-3.aglt2.org
[2025-10-11 00:03:55] apptainer works
[2025-10-11 00:03:55] Set ATHENA_PROC_NUMBER=8
[2025-10-11 00:03:55] Set ATHENA_CORE_NUMBER=8
[2025-10-11 00:03:55] Starting ATLAS job with PandaID=6837829247
[2025-10-11 00:03:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:20:09 (1790885): BOINC client no longer exists - exiting
02:20:09 (1790885): timer handler: client dead, exiting
03:09:55 (2761598): wrapper (7.7.26015): starting
03:09:55 (2761598): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 03:09:55] Arguments: --nthreads 8
[2025-10-11 03:09:55] Threads: 8
[2025-10-11 03:09:55] This job has been restarted, cleaning up previous attempt
[2025-10-11 03:09:55] Checking for CVMFS
[2025-10-11 03:09:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 03:09:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 03:09:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 03:09:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 03:09:58] 2.13.2.0 3608313 127486 290564 151575 3 652 22785834 32935936 25324 16776704 0 176954767 99.614 192898195 29393 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 03:09:58] CVMFS is ok
[2025-10-11 03:09:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 03:09:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 03:09:58] Further information can be found at the LHC@home message board.
[2025-10-11 03:09:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 03:09:58] Checking for apptainer binary...
[2025-10-11 03:09:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 03:09:58] Running /usr/bin/apptainer --version
[2025-10-11 03:09:58] apptainer version 1.4.3-1.el9
[2025-10-11 03:09:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 03:09:59] c6-6-39-3.aglt2.org
[2025-10-11 03:09:59] apptainer works
[2025-10-11 03:09:59] Set ATHENA_PROC_NUMBER=8
[2025-10-11 03:09:59] Set ATHENA_CORE_NUMBER=8
[2025-10-11 03:09:59] Starting ATLAS job with PandaID=6837829247
[2025-10-11 03:09:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:03:56]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:03:56] 2025-10-11 15:03:20,192 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:03:56] 2025-10-11 15:03:20,194 | INFO     | sum of square deviations: 30775702489.35634
[2025-10-11 11:03:56] 2025-10-11 15:03:20,234 | INFO     | sum of deviations: 13684284346.362926
[2025-10-11 11:03:56] 2025-10-11 15:03:20,265 | INFO     | mean x: 1760180850.5291576
[2025-10-11 11:03:56] 2025-10-11 15:03:20,265 | INFO     | mean y: 2191882.084233261
[2025-10-11 11:03:56] 2025-10-11 15:03:20,265 | INFO     | -- intersect: -780464996.9258971
[2025-10-11 11:03:56] 2025-10-11 15:03:20,265 | INFO     | intersect: -780464996.9258971
[2025-10-11 11:03:56] 2025-10-11 15:03:20,266 | INFO     | chi2: 3.633447190502243
[2025-10-11 11:03:56] 2025-10-11 15:03:20,266 | INFO     | sum of square deviations: 29789423835.44096
[2025-10-11 11:03:56] 2025-10-11 15:03:20,286 | INFO     | sum of deviations: 64538461984.90393
[2025-10-11 11:03:56] 2025-10-11 15:03:20,286 | INFO     | mean x: 1760180698.0349345
[2025-10-11 11:03:56] 2025-10-11 15:03:20,286 | INFO     | mean y: 2199693.631004367
[2025-10-11 11:03:56] 2025-10-11 15:03:20,286 | INFO     | -- intersect: -3811212599.746026
[2025-10-11 11:03:56] 2025-10-11 15:03:20,287 | INFO     | intersect: -3811212599.746026
[2025-10-11 11:03:56] 2025-10-11 15:03:20,287 | INFO     | chi2: 2.28996092613856
[2025-10-11 11:03:56] 2025-10-11 15:03:20,287 | INFO     | current chi2=2.28996092613856 (change=36.97552747912586 %)
[2025-10-11 11:03:56] 2025-10-11 15:03:20,288 | INFO     | sum of square deviations: 28824447906.494564
[2025-10-11 11:03:56] 2025-10-11 15:03:20,310 | INFO     | sum of deviations: 64312443071.53648
[2025-10-11 11:03:56] 2025-10-11 15:03:20,310 | INFO     | mean x: 1760180545.540839
[2025-10-11 11:03:56] 2025-10-11 15:03:20,310 | INFO     | mean y: 2199656.430463576
[2025-10-11 11:03:56] 2025-10-11 15:03:20,310 | INFO     | -- intersect: -3925074562.244694
[2025-10-11 11:03:56] 2025-10-11 15:03:20,316 | INFO     | intersect: -3925074562.244694
[2025-10-11 11:03:56] 2025-10-11 15:03:20,317 | INFO     | chi2: 2.2890978251207343
[2025-10-11 11:03:56] 2025-10-11 15:03:20,317 | INFO     | current chi2=2.2890978251207343 (change=0.037690643887138185 %)
[2025-10-11 11:03:56] 2025-10-11 15:03:20,317 | INFO     | right removable region: 452
[2025-10-11 11:03:56] 2025-10-11 15:03:20,318 | INFO     | sum of square deviations: 29789274385.440968
[2025-10-11 11:03:56] 2025-10-11 15:03:20,322 | INFO     | sum of deviations: -77664527607.38863
[2025-10-11 11:03:56] 2025-10-11 15:03:20,322 | INFO     | mean x: 1760181003.0349345
[2025-10-11 11:03:56] 2025-10-11 15:03:20,322 | INFO     | mean y: 2205968.711790393
[2025-10-11 11:03:56] 2025-10-11 15:03:20,322 | INFO     | -- intersect: 4591227652.671282
[2025-10-11 11:03:56] 2025-10-11 15:03:20,322 | INFO     | intersect: 4591227652.671282
[2025-10-11 11:03:56] 2025-10-11 15:03:20,323 | INFO     | chi2: 1.5302273507375694
[2025-10-11 11:03:56] 2025-10-11 15:03:20,323 | INFO     | current chi2=1.5302273507375694 (change=57.88497064887712 %)
[2025-10-11 11:03:56] 2025-10-11 15:03:20,323 | INFO     | sum of square deviations: 28824149006.494534
[2025-10-11 11:03:56] 2025-10-11 15:03:20,329 | INFO     | sum of deviations: -91038957492.88081
[2025-10-11 11:03:56] 2025-10-11 15:03:20,329 | INFO     | mean x: 1760181155.540839
[2025-10-11 11:03:56] 2025-10-11 15:03:20,329 | INFO     | mean y: 2208074.317880795
[2025-10-11 11:03:56] 2025-10-11 15:03:20,329 | INFO     | -- intersect: 5561610968.153412
[2025-10-11 11:03:56] 2025-10-11 15:03:20,329 | INFO     | intersect: 5561610968.153412
[2025-10-11 11:03:56] 2025-10-11 15:03:20,330 | INFO     | chi2: 1.4627023258007918
[2025-10-11 11:03:56] 2025-10-11 15:03:20,331 | INFO     | current chi2=1.4627023258007918 (change=4.4127446097621075 %)
[2025-10-11 11:03:56] 2025-10-11 15:03:20,331 | INFO     | left removable region: 20
[2025-10-11 11:03:56] 2025-10-11 15:03:20,331 | INFO     | sum of square deviations: 24998409682.435196
[2025-10-11 11:03:56] 2025-10-11 15:03:20,375 | INFO     | sum of deviations: -37451916420.19443
[2025-10-11 11:03:56] 2025-10-11 15:03:20,376 | INFO     | mean x: 1760181125.0601852
[2025-10-11 11:03:56] 2025-10-11 15:03:20,376 | INFO     | mean y: 2215875.9305555555
[2025-10-11 11:03:56] 2025-10-11 15:03:20,376 | INFO     | -- intersect: 2639269881.2690306
[2025-10-11 11:03:56] 2025-10-11 15:03:20,376 | INFO     | intersect: 2639269881.2690306
[2025-10-11 11:03:56] 2025-10-11 15:03:20,383 | INFO     | chi2: 0.09247413766891781
[2025-10-11 11:03:56] 2025-10-11 15:03:20,383 | INFO     | -- intersect: 2639269881.2690306
[2025-10-11 11:03:56] 2025-10-11 15:03:20,383 | INFO     | current memory leak: -1.50 B/s (using 432 data points, chi2=0.09)
[2025-10-11 11:03:56] 2025-10-11 15:03:20,384 | INFO     | could have reported an average CPU frequency of 2931 MHz (19 samples)
[2025-10-11 11:03:56] 2025-10-11 15:03:20,385 | INFO     | ..............................
[2025-10-11 11:03:56] 2025-10-11 15:03:20,385 | INFO     | . Timing measurements:
[2025-10-11 11:03:56] 2025-10-11 15:03:20,385 | INFO     | . get job = 0 s
[2025-10-11 11:03:56] 2025-10-11 15:03:20,385 | INFO     | . initial setup = 3 s
[2025-10-11 11:03:56] 2025-10-11 15:03:20,385 | INFO     | . payload setup = 28 s
[2025-10-11 11:03:56] 2025-10-11 15:03:20,385 | INFO     | . stage-in = 0 s
[2025-10-11 11:03:56] 2025-10-11 15:03:20,385 | INFO     | . payload execution = 28221 s
[2025-10-11 11:03:56] 2025-10-11 15:03:20,385 | INFO     | . stage-out = 5 s
[2025-10-11 11:03:56] 2025-10-11 15:03:20,385 | INFO     | . log creation = 1 s
[2025-10-11 11:03:56] 2025-10-11 15:03:20,385 | INFO     | ..............................
[2025-10-11 11:03:56] 2025-10-11 15:03:21,061 | INFO     | time since job start (28351s) is within the limit (172800.0s)
[2025-10-11 11:03:56] 2025-10-11 15:03:21,284 | INFO     | 
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | job summary report
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | --------------------------------------------------
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | PanDA job id: 6837829247
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | task id: 46676269
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | errors: (none)
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | pilot state: finished 
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | transexitcode: 0
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | exeerrorcode: 0
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | exeerrordiag: 
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | exitcode: 0
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | exitmsg: OK
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | cpuconsumptiontime: 43130 s
[2025-10-11 11:03:56] 2025-10-11 15:03:21,285 | INFO     | nevents: 400
[2025-10-11 11:03:56] 2025-10-11 15:03:21,286 | INFO     | neventsw: 0
[2025-10-11 11:03:56] 2025-10-11 15:03:21,286 | INFO     | pid: 2800900
[2025-10-11 11:03:56] 2025-10-11 15:03:21,286 | INFO     | pgrp: 2800900
[2025-10-11 11:03:56] 2025-10-11 15:03:21,286 | INFO     | corecount: 8
[2025-10-11 11:03:56] 2025-10-11 15:03:21,286 | INFO     | event service: False
[2025-10-11 11:03:56] 2025-10-11 15:03:21,286 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 13: 2348913, 20: 2349231, 24: 2349259, 28255: 2386074, 28262: 2395128, 28305: 2395266}
[2025-10-11 11:03:56] 2025-10-11 15:03:21,286 | INFO     | --------------------------------------------------
[2025-10-11 11:03:56] 2025-10-11 15:03:21,286 | INFO     | 
[2025-10-11 11:03:56] 2025-10-11 15:03:21,286 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 11:03:56] 2025-10-11 15:03:21,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,528 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,528 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,528 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,529 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:03:56] 2025-10-11 15:03:21,530 | INFO     | job 6837829247 has completed (purged errors)
[2025-10-11 11:03:56] 2025-10-11 15:03:21,530 | INFO     | overall cleanup function is called
[2025-10-11 11:03:56] 2025-10-11 15:03:22,574 | INFO     | --- collectZombieJob: --- 10, [2800900]
[2025-10-11 11:03:56] 2025-10-11 15:03:22,575 | INFO     | zombie collector waiting for pid 2800900
[2025-10-11 11:03:56] 2025-10-11 15:03:22,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:03:56] 2025-10-11 15:03:22,575 | INFO     | collected zombie processes
[2025-10-11 11:03:56] 2025-10-11 15:03:22,575 | INFO     | will attempt to kill all subprocesses of pid=2800900
[2025-10-11 11:03:56] 2025-10-11 15:03:24,555 | INFO     | process IDs to be killed: [2800900] (in reverse order)
[2025-10-11 11:03:56] 2025-10-11 15:03:24,818 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:03:56] 2025-10-11 15:03:24,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:03:56] 2025-10-11 15:03:24,942 | INFO     | did not find any defunct processes belonging to 2800900
[2025-10-11 11:03:56] 2025-10-11 15:03:25,026 | INFO     | did not find any defunct processes belonging to 2800900
[2025-10-11 11:03:56] 2025-10-11 15:03:25,026 | INFO     | ready for new job
[2025-10-11 11:03:56] 2025-10-11 15:03:25,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:03:56] 2025-10-11 15:03:25,042 | INFO     | ***************************************
[2025-10-11 11:03:56] 2025-10-11 15:03:25,042 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:03:56] 2025-10-11 15:03:25,042 | INFO     | ***************************************
[2025-10-11 11:03:56] 2025-10-11 15:03:25,042 | INFO     | 
[2025-10-11 11:03:56] 2025-10-11 15:03:25,078 | INFO     | architecture information:
[2025-10-11 11:03:56] 2025-10-11 15:03:25,078 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:03:56] 2025-10-11 15:03:25,195 | INFO     | cat /etc/os-release:
[2025-10-11 11:03:56] NAME="CentOS Linux"
[2025-10-11 11:03:56] VERSION="7 (Core)"
[2025-10-11 11:03:56] ID="centos"
[2025-10-11 11:03:56] ID_LIKE="rhel fedora"
[2025-10-11 11:03:56] VERSION_ID="7"
[2025-10-11 11:03:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:03:56] ANSI_COLOR="0;31"
[2025-10-11 11:03:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:03:56] HOME_URL="https://www.centos.org/"
[2025-10-11 11:03:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:03:56] 
[2025-10-11 11:03:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:03:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:03:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:03:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:03:56] 
[2025-10-11 11:03:56] 2025-10-11 15:03:25,196 | INFO     | ***************************************
[2025-10-11 11:03:56] 2025-10-11 15:03:25,700 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 11:03:56] 2025-10-11 15:03:25,860 | INFO     | sufficient remaining disk space (73980182528 B)
[2025-10-11 11:03:56] 2025-10-11 15:03:25,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:03:56] 2025-10-11 15:03:25,860 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:03:56] 2025-10-11 15:03:25,861 | INFO     | update_server=False
[2025-10-11 11:03:56] 2025-10-11 15:03:25,861 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:03:56] 2025-10-11 15:03:25,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:03:56] 2025-10-11 15:03:25,975 | INFO     | all data control threads have been joined
[2025-10-11 11:03:56] 2025-10-11 15:03:26,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:03:56] 2025-10-11 15:03:26,043 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 11:03:56] 2025-10-11 15:03:26,044 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 11:03:56] 2025-10-11 15:03:26,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:03:56] 2025-10-11 15:03:26,044 | INFO     | will abort loop
[2025-10-11 11:03:56] 2025-10-11 15:03:26,306 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:03:56] 2025-10-11 15:03:26,641 | INFO     | all job control threads have been joined
[2025-10-11 11:03:56] 2025-10-11 15:03:26,867 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:26,891 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:26,936 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:26,981 | INFO     | [data] control thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:27,046 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:27,047 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:27,050 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:27,312 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:27,338 | INFO     | all payload control threads have been joined
[2025-10-11 11:03:56] 2025-10-11 15:03:27,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:27,663 | INFO     | [job] control thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:27,855 | INFO     | [job] validate thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:27,892 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:28,050 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:28,065 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:28,344 | INFO     | [payload] control thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:29,895 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:03:56] 2025-10-11 15:03:43,824 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:03:56] 2025-10-11 15:03:44,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140675207571264)>', '<ExcThread(monitor, started 140674691208960)>']
[2025-10-11 11:03:56] 2025-10-11 15:03:50,015 | INFO     | all workflow threads have been joined
[2025-10-11 11:03:56] 2025-10-11 15:03:50,016 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:03:56] 2025-10-11 15:03:50,016 | INFO     | traces error code: 0
[2025-10-11 11:03:56] 2025-10-11 15:03:50,016 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:03:56] 2025-10-11 15:03:55,843 | INFO     | PID=2778616 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 11:03:56] 2025-10-11 15:03:55,844 | INFO     | .. there are 42 such processes running
[2025-10-11 11:03:56] 2025-10-11 15:03:55,845 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:03:56] 2025-10-11 15:03:55,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:03:56] 2025-10-11 15:03:55,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:03:56] 2025-10-11 15:03:55,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:03:56] 2025-10-11 15:03:55,846 | INFO     | [monitor] control thread has ended
[2025-10-11 11:03:56] 2025-10-11 15:03:56,048 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:03:56] 2025-10-11 15:03:56,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:03:56] 2025-10-11 15:03:56,073 [wrapper] pilotpid: 2778616
[2025-10-11 11:03:56] 2025-10-11 15:03:56,093 [wrapper] Pilot exit status: 0
[2025-10-11 11:03:56] 2025-10-11 15:03:56,219 [wrapper] pandaids: 6837829247 6837829247
[2025-10-11 11:03:56] 2025-10-11 15:03:56,362 [wrapper] cleanup supervisor_pilot  611809 2778618
[2025-10-11 11:03:56] 2025-10-11 15:03:56,367 [wrapper] Test setup, not cleaning
[2025-10-11 11:03:56] 2025-10-11 15:03:56,387 [wrapper] apfmon messages muted
[2025-10-11 11:03:56] 2025-10-11 15:03:56,399 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:03:56] 2025-10-11 15:03:56,426 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:03:56]  *** Error codes and diagnostics ***
[2025-10-11 11:03:56]     "exeErrorCode": 0,
[2025-10-11 11:03:56]     "exeErrorDiag": "",
[2025-10-11 11:03:56]     "pilotErrorCode": 0,
[2025-10-11 11:03:56]     "pilotErrorDiag": "",
[2025-10-11 11:03:56]  *** Listing of results directory ***
[2025-10-11 11:03:56] total 629020
[2025-10-11 11:03:56] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 17:48 pilot3.tar.gz
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 18:16 queuedata.json
[2025-10-11 11:03:56] -rwx------. 1 boincer umatlas     36292 Oct 10 18:17 runpilot2-wrapper.sh
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:03:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:03 run_atlas
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:03 job.xml
[2025-10-11 11:03:56] -rw-r--r--. 3 boincer umatlas 220336194 Oct 11 00:03 EVNT.46676267._001870.pool.root.1
[2025-10-11 11:03:56] -rw-r--r--. 3 boincer umatlas 220336194 Oct 11 00:03 ATLAS.root_0
[2025-10-11 11:03:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:03 start_atlas.sh
[2025-10-11 11:03:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:03 shared
[2025-10-11 11:03:56] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 00:03 input.tar.gz
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:03 boinc_lockfile
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 03:09 pandaJob.out
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas    975525 Oct 11 03:10 agis_schedconf.cvmfs.json
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas      6842 Oct 11 11:00 init_data.xml
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas 191835714 Oct 11 11:00 HITS.46676269._046270.pool.root.1
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas       531 Oct 11 11:00 boinc_task_state.xml
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas      1051 Oct 11 11:02 memory_monitor_summary.json
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas   1560580 Oct 11 11:02 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas    616603 Oct 11 11:02 log.46676269._046270.job.log.tgz.1
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas      7849 Oct 11 11:03 heartbeat.json
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas        28 Oct 11 11:03 wrapper_checkpoint.txt
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 11:03 boinc_mmap_file
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas        97 Oct 11 11:03 pilot_heartbeat.json
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas       823 Oct 11 11:03 pilotlog.txt
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas   3230645 Oct 11 11:03 log.46676269._046270.job.log.1
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas       357 Oct 11 11:03 output.list
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas       620 Oct 11 11:03 runtime_log
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas   3870720 Oct 11 11:03 result.tar.gz
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas      8794 Oct 11 11:03 runtime_log.err
[2025-10-11 11:03:56] -rw-------. 1 boincer umatlas       786 Oct 11 11:03 KLLODmObaR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXbeNDmt1uxpm.diag
[2025-10-11 11:03:56] -rw-r--r--. 1 boincer umatlas     23332 Oct 11 11:03 stderr.txt
[2025-10-11 11:03:57] HITS file was successfully produced:
[2025-10-11 11:03:57] -rw-------. 1 boincer umatlas 191835714 Oct 11 11:00 shared/HITS.pool.root.1
[2025-10-11 11:03:57]  *** Contents of shared directory: ***
[2025-10-11 11:03:57] total 406880
[2025-10-11 11:03:57] -rw-r--r--. 3 boincer umatlas 220336194 Oct 11 00:03 ATLAS.root_0
[2025-10-11 11:03:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:03 start_atlas.sh
[2025-10-11 11:03:57] -rw-r--r--. 2 boincer umatlas    569678 Oct 11 00:03 input.tar.gz
[2025-10-11 11:03:57] -rw-------. 1 boincer umatlas 191835714 Oct 11 11:00 HITS.pool.root.1
[2025-10-11 11:03:57] -rw-------. 1 boincer umatlas   3870720 Oct 11 11:03 result.tar.gz
11:03:58 (2761598): run_atlas exited; CPU time 44130.461755
11:03:58 (2761598): called boinc_finish(0)

</stderr_txt>
]]>

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