Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:18:31 (1299005): wrapper (7.7.26015): starting
04:18:31 (1299005): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 04:18:31] Arguments: --nthreads 4
[2025-10-12 04:18:31] Threads: 4
[2025-10-12 04:18:31] Checking for CVMFS
[2025-10-12 04:18:31] No cvmfs_config command found, will try listing directly
[2025-10-12 04:18:31] CVMFS is ok
[2025-10-12 04:18:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 04:18:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 04:18:31] Further information can be found at the LHC@home message board.
[2025-10-12 04:18:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 04:18:31] Checking for apptainer binary...
[2025-10-12 04:18:31] which: no apptainer in ((null))
[2025-10-12 04:18:31] apptainer is not installed, using version from CVMFS
[2025-10-12 04:18:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 04:18:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-10-12 04:18:31] apptainer works
[2025-10-12 04:18:31] Set ATHENA_PROC_NUMBER=4
[2025-10-12 04:18:31] Set ATHENA_CORE_NUMBER=4
[2025-10-12 04:18:31] Starting ATLAS job with PandaID=6837828165
[2025-10-12 04:18:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 08:48:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 08:48:31] 2025-10-12 05:55:06,059 | INFO     | mean x: 1760242013.0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,059 | INFO     | mean y: 2421393.7276995303
[2025-10-12 08:48:31] 2025-10-12 05:55:06,060 | INFO     | -- intersect: 45886168355.150826
[2025-10-12 08:48:31] 2025-10-12 05:55:06,060 | INFO     | intersect: 45886168355.150826
[2025-10-12 08:48:31] 2025-10-12 05:55:06,060 | INFO     | chi2: 2.5368691327085564
[2025-10-12 08:48:31] 2025-10-12 05:55:06,061 | INFO     | sum of square deviations: 2790348132.0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,062 | INFO     | sum of deviations: -61983459232.5
[2025-10-12 08:48:31] 2025-10-12 05:55:06,062 | INFO     | mean x: 1760241860.5
[2025-10-12 08:48:31] 2025-10-12 05:55:06,062 | INFO     | mean y: 2433137.033653846
[2025-10-12 08:48:31] 2025-10-12 05:55:06,063 | INFO     | -- intersect: 39103604187.485825
[2025-10-12 08:48:31] 2025-10-12 05:55:06,063 | INFO     | intersect: 39103604187.485825
[2025-10-12 08:48:31] 2025-10-12 05:55:06,063 | INFO     | chi2: 1.7490552649509186
[2025-10-12 08:48:31] 2025-10-12 05:55:06,063 | INFO     | current chi2=1.7490552649509186 (change=31.05457264626446 %)
[2025-10-12 08:48:31] 2025-10-12 05:55:06,064 | INFO     | sum of square deviations: 2593916542.0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,065 | INFO     | sum of deviations: -59693908748.0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,065 | INFO     | mean x: 1760241708.0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,065 | INFO     | mean y: 2434913.133004926
[2025-10-12 08:48:31] 2025-10-12 05:55:06,066 | INFO     | -- intersect: 40510950198.96353
[2025-10-12 08:48:31] 2025-10-12 05:55:06,066 | INFO     | intersect: 40510950198.96353
[2025-10-12 08:48:31] 2025-10-12 05:55:06,066 | INFO     | chi2: 1.7414178857150169
[2025-10-12 08:48:31] 2025-10-12 05:55:06,066 | INFO     | current chi2=1.7414178857150169 (change=0.4366573995085286 %)
[2025-10-12 08:48:31] 2025-10-12 05:55:06,066 | INFO     | right removable region: 202
[2025-10-12 08:48:31] 2025-10-12 05:55:06,067 | INFO     | sum of square deviations: 2790348132.0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,068 | INFO     | sum of deviations: -102216601664.5
[2025-10-12 08:48:31] 2025-10-12 05:55:06,069 | INFO     | mean x: 1760242165.5
[2025-10-12 08:48:31] 2025-10-12 05:55:06,069 | INFO     | mean y: 2438962.4375
[2025-10-12 08:48:31] 2025-10-12 05:55:06,069 | INFO     | -- intersect: 64483988845.2499
[2025-10-12 08:48:31] 2025-10-12 05:55:06,069 | INFO     | intersect: 64483988845.2499
[2025-10-12 08:48:31] 2025-10-12 05:55:06,069 | INFO     | chi2: 1.258004349303417
[2025-10-12 08:48:31] 2025-10-12 05:55:06,070 | INFO     | current chi2=1.258004349303417 (change=50.41114525445485 %)
[2025-10-12 08:48:31] 2025-10-12 05:55:06,070 | INFO     | sum of square deviations: 2593916542.0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,071 | INFO     | sum of deviations: -94774825504.00002
[2025-10-12 08:48:31] 2025-10-12 05:55:06,072 | INFO     | mean x: 1760242318.0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,072 | INFO     | mean y: 2433169.4975369456
[2025-10-12 08:48:31] 2025-10-12 05:55:06,072 | INFO     | -- intersect: 64317015320.46271
[2025-10-12 08:48:31] 2025-10-12 05:55:06,072 | INFO     | intersect: 64317015320.46271
[2025-10-12 08:48:31] 2025-10-12 05:55:06,072 | INFO     | chi2: 1.2553070798194512
[2025-10-12 08:48:31] 2025-10-12 05:55:06,073 | INFO     | current chi2=1.2553070798194512 (change=0.2144085976697372 %)
[2025-10-12 08:48:31] 2025-10-12 05:55:06,073 | INFO     | left removable region: 20
[2025-10-12 08:48:31] 2025-10-12 05:55:06,073 | INFO     | sum of square deviations: 1869302025.5
[2025-10-12 08:48:31] 2025-10-12 05:55:06,074 | INFO     | sum of deviations: -59358868657.50001
[2025-10-12 08:48:31] 2025-10-12 05:55:06,075 | INFO     | mean x: 1760242287.5
[2025-10-12 08:48:31] 2025-10-12 05:55:06,075 | INFO     | mean y: 2432813.0824175826
[2025-10-12 08:48:31] 2025-10-12 05:55:06,075 | INFO     | -- intersect: 55898157165.6744
[2025-10-12 08:48:31] 2025-10-12 05:55:06,075 | INFO     | intersect: 55898157165.6744
[2025-10-12 08:48:31] 2025-10-12 05:55:06,075 | INFO     | chi2: 0.4138792958334419
[2025-10-12 08:48:31] 2025-10-12 05:55:06,076 | INFO     | -- intersect: 55898157165.6744
[2025-10-12 08:48:31] 2025-10-12 05:55:06,076 | INFO     | current memory leak: -31.75 B/s (using 182 data points, chi2=0.41)
[2025-10-12 08:48:31] 2025-10-12 05:55:06,076 | INFO     | could have reported an average CPU frequency of 2583 MHz (11 samples)
[2025-10-12 08:48:31] 2025-10-12 05:55:06,077 | INFO     | ..............................
[2025-10-12 08:48:31] 2025-10-12 05:55:06,077 | INFO     | . Timing measurements:
[2025-10-12 08:48:31] 2025-10-12 05:55:06,077 | INFO     | . get job = 0 s
[2025-10-12 08:48:31] 2025-10-12 05:55:06,077 | INFO     | . initial setup = 1 s
[2025-10-12 08:48:31] 2025-10-12 05:55:06,077 | INFO     | . payload setup = 5 s
[2025-10-12 08:48:31] 2025-10-12 05:55:06,077 | INFO     | . stage-in = 0 s
[2025-10-12 08:48:31] 2025-10-12 05:55:06,077 | INFO     | . payload execution = 12954 s
[2025-10-12 08:48:31] 2025-10-12 05:55:06,078 | INFO     | . stage-out = 1 s
[2025-10-12 08:48:31] 2025-10-12 05:55:06,078 | INFO     | . log creation = 0 s
[2025-10-12 08:48:31] 2025-10-12 05:55:06,078 | INFO     | ..............................
[2025-10-12 08:48:31] 2025-10-12 05:55:06,377 | INFO     | 
[2025-10-12 08:48:31] 2025-10-12 05:55:06,377 | INFO     | job summary report
[2025-10-12 08:48:31] 2025-10-12 05:55:06,377 | INFO     | --------------------------------------------------
[2025-10-12 08:48:31] 2025-10-12 05:55:06,378 | INFO     | PanDA job id: 6837828165
[2025-10-12 08:48:31] 2025-10-12 05:55:06,378 | INFO     | task id: 46676269
[2025-10-12 08:48:31] 2025-10-12 05:55:06,378 | INFO     | errors: (none)
[2025-10-12 08:48:31] 2025-10-12 05:55:06,378 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 08:48:31] 2025-10-12 05:55:06,378 | INFO     | pilot state: finished 
[2025-10-12 08:48:31] 2025-10-12 05:55:06,378 | INFO     | transexitcode: 0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,378 | INFO     | exeerrorcode: 0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,378 | INFO     | exeerrordiag: 
[2025-10-12 08:48:31] 2025-10-12 05:55:06,379 | INFO     | exitcode: 0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,379 | INFO     | exitmsg: OK
[2025-10-12 08:48:31] 2025-10-12 05:55:06,379 | INFO     | cpuconsumptiontime: 49680 s
[2025-10-12 08:48:31] 2025-10-12 05:55:06,379 | INFO     | nevents: 400
[2025-10-12 08:48:31] 2025-10-12 05:55:06,379 | INFO     | neventsw: 0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,379 | INFO     | pid: 1309738
[2025-10-12 08:48:31] 2025-10-12 05:55:06,379 | INFO     | pgrp: 1309738
[2025-10-12 08:48:31] 2025-10-12 05:55:06,379 | INFO     | corecount: 4
[2025-10-12 08:48:31] 2025-10-12 05:55:06,380 | INFO     | event service: False
[2025-10-12 08:48:31] 2025-10-12 05:55:06,380 | INFO     | sizes: {0: 2348029, 1: 2348896, 5: 2349158, 12: 2349214, 12964: 2379378, 12965: 2388582, 12969: 2388720}
[2025-10-12 08:48:31] 2025-10-12 05:55:06,380 | INFO     | --------------------------------------------------
[2025-10-12 08:48:31] 2025-10-12 05:55:06,380 | INFO     | 
[2025-10-12 08:48:31] 2025-10-12 05:55:06,380 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-12 08:48:31] 2025-10-12 05:55:06,400 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,401 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,401 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,401 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,401 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,401 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,402 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,402 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,402 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,402 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,402 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,402 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,402 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,403 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 08:48:31] 2025-10-12 05:55:06,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,403 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 08:48:31] 2025-10-12 05:55:06,404 | INFO     | job 6837828165 has completed (purged errors)
[2025-10-12 08:48:31] 2025-10-12 05:55:06,404 | INFO     | overall cleanup function is called
[2025-10-12 08:48:31] 2025-10-12 05:55:06,903 | WARNING  | process 1309738 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 08:48:31] 2025-10-12 05:55:07,176 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 08:48:31] 2025-10-12 05:55:07,409 | INFO     | --- collectZombieJob: --- 10, [1309738]
[2025-10-12 08:48:31] 2025-10-12 05:55:07,409 | INFO     | zombie collector waiting for pid 1309738
[2025-10-12 08:48:31] 2025-10-12 05:55:07,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 08:48:31] 2025-10-12 05:55:07,409 | INFO     | collected zombie processes
[2025-10-12 08:48:31] 2025-10-12 05:55:07,410 | INFO     | will attempt to kill all subprocesses of pid=1309738
[2025-10-12 08:48:31] 2025-10-12 05:55:07,625 | INFO     | number of running child processes to parent process 1309738: 1
[2025-10-12 08:48:31] 2025-10-12 05:55:07,625 | INFO     | maximum number of monitored processes: 6
[2025-10-12 08:48:31] 2025-10-12 05:55:07,625 | INFO     | aborting job monitoring since job object (job id=6837828165) has expired
[2025-10-12 08:48:31] 2025-10-12 05:55:07,863 | INFO     | process IDs to be killed: [1309738] (in reverse order)
[2025-10-12 08:48:31] 2025-10-12 05:55:07,947 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 08:48:31] 2025-10-12 05:55:07,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 08:48:31] 2025-10-12 05:55:07,956 | INFO     | did not find any defunct processes belonging to 1309738
[2025-10-12 08:48:31] 2025-10-12 05:55:07,965 | INFO     | did not find any defunct processes belonging to 1309738
[2025-10-12 08:48:31] 2025-10-12 05:55:07,965 | INFO     | ready for new job
[2025-10-12 08:48:31] 2025-10-12 05:55:07,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 08:48:31] 2025-10-12 05:55:07,967 | INFO     | ***************************************
[2025-10-12 08:48:31] 2025-10-12 05:55:07,968 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 08:48:31] 2025-10-12 05:55:07,968 | INFO     | ***************************************
[2025-10-12 08:48:31] 2025-10-12 05:55:07,968 | INFO     | 
[2025-10-12 08:48:31] 2025-10-12 05:55:07,970 | INFO     | architecture information:
[2025-10-12 08:48:31] 2025-10-12 05:55:07,971 | INFO     | executing command: cat /etc/os-release
[2025-10-12 08:48:31] 2025-10-12 05:55:07,985 | INFO     | cat /etc/os-release:
[2025-10-12 08:48:31] NAME="CentOS Linux"
[2025-10-12 08:48:31] VERSION="7 (Core)"
[2025-10-12 08:48:31] ID="centos"
[2025-10-12 08:48:31] ID_LIKE="rhel fedora"
[2025-10-12 08:48:31] VERSION_ID="7"
[2025-10-12 08:48:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 08:48:31] ANSI_COLOR="0;31"
[2025-10-12 08:48:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 08:48:31] HOME_URL="https://www.centos.org/"
[2025-10-12 08:48:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 08:48:31] 
[2025-10-12 08:48:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 08:48:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 08:48:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 08:48:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 08:48:31] 
[2025-10-12 08:48:31] 2025-10-12 05:55:07,985 | INFO     | ***************************************
[2025-10-12 08:48:31] 2025-10-12 05:55:08,488 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-12 08:48:31] 2025-10-12 05:55:08,503 | INFO     | sufficient remaining disk space (1674978525184 B)
[2025-10-12 08:48:31] 2025-10-12 05:55:08,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 08:48:31] 2025-10-12 05:55:08,504 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 08:48:31] 2025-10-12 05:55:08,504 | INFO     | update_server=False
[2025-10-12 08:48:31] 2025-10-12 05:55:08,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 08:48:31] 2025-10-12 05:55:08,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 08:48:31] 2025-10-12 05:55:08,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:48:31] 2025-10-12 05:55:08,505 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 08:48:31] 2025-10-12 05:55:08,506 | INFO     | will abort loop
[2025-10-12 08:48:31] 2025-10-12 05:55:08,515 | INFO     | all payload control threads have been joined
[2025-10-12 08:48:31] 2025-10-12 05:55:09,106 | INFO     | all job control threads have been joined
[2025-10-12 08:48:31] 2025-10-12 05:55:09,417 | INFO     | all data control threads have been joined
[2025-10-12 08:48:31] 2025-10-12 05:55:09,506 | INFO     | [job] retrieve thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:09,511 | INFO     | [job] job monitor thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:09,517 | INFO     | [payload] control thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:09,792 | INFO     | [payload] validate_post thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:10,103 | INFO     | [payload] failed_post thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:10,110 | INFO     | [job] control thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:10,322 | INFO     | [data] copytool_in thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:10,422 | INFO     | [data] control thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:10,456 | INFO     | [job] validate thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:10,507 | INFO     | [data] copytool_out thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:10,653 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:10,806 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:10,808 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:11,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 08:48:31] 2025-10-12 05:55:12,201 | INFO     | [job] queue monitor thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:12,512 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:18,697 | INFO     | job.realtimelogging is not enabled
[2025-10-12 08:48:31] 2025-10-12 05:55:19,703 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 08:48:31] 2025-10-12 05:55:38,794 | INFO     | PID=1302683 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 08:48:31] 2025-10-12 05:55:38,794 | INFO     | .. there are 4 such processes running
[2025-10-12 08:48:31] 2025-10-12 05:55:38,795 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 08:48:31] 2025-10-12 05:55:38,795 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 08:48:31] 2025-10-12 05:55:38,795 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 08:48:31] 2025-10-12 05:56:02,103 | INFO     | [monitor] cgroup control has ended
[2025-10-12 08:48:31] 2025-10-12 05:56:02,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22655331751744)>', '<ExcThread(monitor, started 22655092619008)>']
[2025-10-12 08:48:31] 2025-10-12 05:56:02,883 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 08:48:31] 2025-10-12 05:56:02,884 | INFO     | [monitor] control thread has ended
[2025-10-12 08:48:31] 2025-10-12 05:56:07,471 | INFO     | all workflow threads have been joined
[2025-10-12 08:48:31] 2025-10-12 05:56:07,472 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 08:48:31] 2025-10-12 05:56:07,472 | INFO     | traces error code: 0
[2025-10-12 08:48:31] 2025-10-12 05:56:07,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 08:48:31] 2025-10-12 05:56:07,605 [wrapper] ==== pilot stdout END ====
[2025-10-12 08:48:31] 2025-10-12 05:56:07,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 08:48:31] 2025-10-12 05:56:07,610 [wrapper] pilotpid: 1302683
[2025-10-12 08:48:31] 2025-10-12 05:56:07,613 [wrapper] Pilot exit status: 0
[2025-10-12 08:48:31] 2025-10-12 05:56:07,623 [wrapper] pandaids: 6837828165
[2025-10-12 08:48:31] 2025-10-12 05:56:07,682 [wrapper] cleanup supervisor_pilot 1504081 1302684
[2025-10-12 08:48:31] 2025-10-12 05:56:07,685 [wrapper] Test setup, not cleaning
[2025-10-12 08:48:31] 2025-10-12 05:56:07,688 [wrapper] apfmon messages muted
[2025-10-12 08:48:31] 2025-10-12 05:56:07,690 [wrapper] ==== wrapper stdout END ====
[2025-10-12 08:48:31] 2025-10-12 05:56:07,693 [wrapper] ==== wrapper stderr END ====
[2025-10-12 08:48:31]  *** Error codes and diagnostics ***
[2025-10-12 08:48:31]     "exeErrorCode": 0,
[2025-10-12 08:48:31]     "exeErrorDiag": "",
[2025-10-12 08:48:31]     "pilotErrorCode": 0,
[2025-10-12 08:48:31]     "pilotErrorDiag": "",
[2025-10-12 08:48:31]  *** Listing of results directory ***
[2025-10-12 08:48:31] total 415156
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc      5112 Oct 10 23:48 queuedata.json
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc    557409 Oct 10 23:48 pilot3.tar.gz
[2025-10-12 08:48:31] -rwx------ 1 boinc boinc     36292 Oct 10 23:52 runpilot2-wrapper.sh
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc       100 Oct 12 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 08:48:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 04:18 run_atlas
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc       105 Oct 12 04:18 job.xml
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc      6422 Oct 12 04:18 init_data.xml
[2025-10-12 08:48:31] -rw-r--r-- 2 boinc boinc 219698940 Oct 12 04:18 EVNT.46676267._001853.pool.root.1
[2025-10-12 08:48:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 04:18 start_atlas.sh
[2025-10-12 08:48:31] drwxrwx--x 2 boinc boinc      4096 Oct 12 04:18 shared
[2025-10-12 08:48:31] -rw-r--r-- 2 boinc boinc    569685 Oct 12 04:18 input.tar.gz
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc         0 Oct 12 04:18 boinc_lockfile
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc      2550 Oct 12 04:18 pandaJob.out
[2025-10-12 08:48:31] -rw------- 1 boinc boinc    975496 Oct 12 04:18 agis_schedconf.cvmfs.json
[2025-10-12 08:48:31] drwx------ 5 boinc boinc      4096 Oct 12 04:18 pilot3
[2025-10-12 08:48:31] -rw------- 1 boinc boinc 197053479 Oct 12 07:54 HITS.46676269._045839.pool.root.1
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc       527 Oct 12 07:54 boinc_task_state.xml
[2025-10-12 08:48:31] -rw------- 1 boinc boinc      1030 Oct 12 07:54 memory_monitor_summary.json
[2025-10-12 08:48:31] -rw------- 1 boinc boinc   1560580 Oct 12 07:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 08:48:31] -rw------- 1 boinc boinc    383944 Oct 12 07:55 log.46676269._045839.job.log.tgz.1
[2025-10-12 08:48:31] -rw------- 1 boinc boinc      7834 Oct 12 07:55 heartbeat.json
[2025-10-12 08:48:31] -rw------- 1 boinc boinc        95 Oct 12 07:55 pilot_heartbeat.json
[2025-10-12 08:48:31] -rw------- 1 boinc boinc      4908 Oct 12 07:56 pilotlog.txt
[2025-10-12 08:48:31] -rw------- 1 boinc boinc   1850122 Oct 12 07:56 log.46676269._045839.job.log.1
[2025-10-12 08:48:31] -rw------- 1 boinc boinc       357 Oct 12 07:56 output.list
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc       620 Oct 12 07:56 runtime_log
[2025-10-12 08:48:31] -rw------- 1 boinc boinc   2252800 Oct 12 07:56 result.tar.gz
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc      9070 Oct 12 07:56 runtime_log.err
[2025-10-12 08:48:31] -rw------- 1 boinc boinc       666 Oct 12 07:56 QW1LDmXDaR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyXeNDmboALAo.diag
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc        26 Oct 12 08:48 wrapper_checkpoint.txt
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc      8192 Oct 12 08:48 boinc_mmap_file
[2025-10-12 08:48:31] -rw-r--r-- 1 boinc boinc     20801 Oct 12 08:48 stderr.txt
[2025-10-12 08:48:31] HITS file was successfully produced:
[2025-10-12 08:48:31] -rw------- 1 boinc boinc 197053479 Oct 12 07:54 shared/HITS.pool.root.1
[2025-10-12 08:48:31]  *** Contents of shared directory: ***
[2025-10-12 08:48:31] total 409768
[2025-10-12 08:48:31] -rw-r--r-- 2 boinc boinc 219698940 Oct 12 04:18 ATLAS.root_0
[2025-10-12 08:48:31] -rw-r--r-- 2 boinc boinc     15120 Oct 12 04:18 start_atlas.sh
[2025-10-12 08:48:31] -rw-r--r-- 2 boinc boinc    569685 Oct 12 04:18 input.tar.gz
[2025-10-12 08:48:31] -rw------- 1 boinc boinc 197053479 Oct 12 07:54 HITS.pool.root.1
[2025-10-12 08:48:31] -rw------- 1 boinc boinc   2252800 Oct 12 07:56 result.tar.gz
08:48:33 (1299005): run_atlas exited; CPU time 50145.809366
08:48:33 (1299005): called boinc_finish(0)

</stderr_txt>
]]>

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