Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:22:31 (4015277): wrapper (7.7.26015): starting
08:22:31 (4015277): wrapper: running run_atlas (--nthreads 6)
[2025-10-14 08:22:31] Arguments: --nthreads 6
[2025-10-14 08:22:31] Threads: 6
[2025-10-14 08:22:31] Checking for CVMFS
[2025-10-14 08:22:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-14 08:22:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-14 08:22:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-14 08:22:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-14 08:22:31] 2.13.1.0 3910062 183 52800 151677 1 57 30741396 52428801 94 130560 0 321177 99.988 10760 160 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-14 08:22:31] CVMFS is ok
[2025-10-14 08:22:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 08:22:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-14 08:22:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-14 08:22:32] Further information can be found at the LHC@home message board.
[2025-10-14 08:22:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 08:22:32] Checking for apptainer binary...
[2025-10-14 08:22:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-14 08:22:32] Running /usr/bin/apptainer --version
[2025-10-14 08:22:32] apptainer version 1.4.1-1.el9
[2025-10-14 08:22:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 08:22:32] Atto003
[2025-10-14 08:22:32] apptainer works
[2025-10-14 08:22:32] Set ATHENA_PROC_NUMBER=6
[2025-10-14 08:22:32] Set ATHENA_CORE_NUMBER=6
[2025-10-14 08:22:32] Starting ATLAS job with PandaID=6837707067
[2025-10-14 08:22:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 09:43:10]  *** The last 200 lines of the pilot log: ***
[2025-10-14 09:43:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-14 09:43:10]  replicas=None
[2025-10-14 09:43:10]  scope=mc23_13p6TeV
[2025-10-14 09:43:10]  status=None
[2025-10-14 09:43:10]  status_code=0
[2025-10-14 09:43:10]  storage_token=
[2025-10-14 09:43:10]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6837707067/log.46676269._043332.job.log.tgz.1
[2025-10-14 09:43:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/ab/log.46676269._043332.job.log.tgz.1
[2025-10-14 09:43:10]  workdir=None
[2025-10-14 09:43:10] ]
[2025-10-14 09:43:10] 2025-10-14 00:42:33,217 | INFO     | transferring file log.46676269._043332.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6837707067/log.46676269._043332.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-14 09:43:10] 2025-10-14 00:42:33,217 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6837707067/log.46676269._043332.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._043332.job
[2025-10-14 09:43:10] 2025-10-14 00:42:33,225 | INFO     | adding to output.list: log.46676269._043332.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/ab/log.46676269._043332.job.log.tg
[2025-10-14 09:43:10] 2025-10-14 00:42:33,225 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-14 09:43:10] 2025-10-14 00:42:33,225 | INFO     | summary of transferred files:
[2025-10-14 09:43:10] 2025-10-14 00:42:33,225 | INFO     |  -- lfn=log.46676269._043332.job.log.tgz.1, status_code=0, status=transferred
[2025-10-14 09:43:10] 2025-10-14 00:42:33,225 | INFO     | stage-out finished correctly
[2025-10-14 09:43:10] 2025-10-14 00:42:33,253 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-14 09:43:10] 2025-10-14 00:42:33,278 | INFO     | job 6837707067 has state=finished
[2025-10-14 09:43:10] 2025-10-14 00:42:33,279 | INFO     | preparing for final server update for job 6837707067 in state='finished'
[2025-10-14 09:43:10] 2025-10-14 00:42:33,653 | INFO     | time since job start (4789s) is within the limit (172800.0s)
[2025-10-14 09:43:10] 2025-10-14 00:42:34,347 | INFO     | monitor loop #367: job 0:6837707067 is in state 'finished'
[2025-10-14 09:43:10] 2025-10-14 00:42:34,348 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 09:43:10] 2025-10-14 00:42:34,430 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-14 09:43:10] 2025-10-14 00:42:34,430 | INFO     | this job has now completed (state=finished)
[2025-10-14 09:43:10] 2025-10-14 00:42:34,430 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-14 09:43:10] 2025-10-14 00:42:34,430 | INFO     | log transfer has been attempted: DONE
[2025-10-14 09:43:10] 2025-10-14 00:42:34,430 | INFO     | job 6837707067 has finished - writing final server update
[2025-10-14 09:43:10] 2025-10-14 00:42:34,430 | INFO     | total number of processed events: 400 (read)
[2025-10-14 09:43:10] 2025-10-14 00:42:34,432 | INFO     | executing command: lscpu
[2025-10-14 09:43:10] 2025-10-14 00:42:34,444 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-14 09:43:10] 2025-10-14 00:42:35,659 | INFO     | time since job start (4791s) is within the limit (172800.0s)
[2025-10-14 09:43:10] 2025-10-14 00:42:36,850 | INFO     | monitor loop #368: job 0:6837707067 is in state 'finished'
[2025-10-14 09:43:10] 2025-10-14 00:42:36,851 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 09:43:10] 2025-10-14 00:42:37,665 | INFO     | time since job start (4793s) is within the limit (172800.0s)
[2025-10-14 09:43:10] 2025-10-14 00:42:38,417 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 09:43:10] 2025-10-14 00:42:38,418 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4209.3738125
[2025-10-14 09:43:10] 2025-10-14 00:42:38,419 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6837707067/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 09:43:10] 2025-10-14 00:42:38,419 | INFO     | extracted standard info from prmon json
[2025-10-14 09:43:10] 2025-10-14 00:42:38,419 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 09:43:10] 2025-10-14 00:42:38,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 09:43:10] 2025-10-14 00:42:38,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 09:43:10] 2025-10-14 00:42:38,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | fitting pss+swap vs Time
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | sum of square deviations: 115715658.0
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | sum of deviations: -5831982165.000001
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | mean x: 1760400256.5
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | mean y: 2570040.5833333335
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | -- intersect: 88725419451.07043
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | intersect: 88725419451.07043
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | chi2: 0.05785448702133288
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | -- intersect: 88725419451.07043
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | current memory leak: -50.40 B/s (using 72 data points, chi2=0.06)
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | could have reported an average CPU frequency of 4013 MHz (6 samples)
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | ..............................
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | . Timing measurements:
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | . get job = 0 s
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | . initial setup = 4 s
[2025-10-14 09:43:10] 2025-10-14 00:42:38,420 | INFO     | . payload setup = 5 s
[2025-10-14 09:43:10] 2025-10-14 00:42:38,421 | INFO     | . stage-in = 0 s
[2025-10-14 09:43:10] 2025-10-14 00:42:38,421 | INFO     | . payload execution = 4765 s
[2025-10-14 09:43:10] 2025-10-14 00:42:38,421 | INFO     | . stage-out = 0 s
[2025-10-14 09:43:10] 2025-10-14 00:42:38,421 | INFO     | . log creation = 0 s
[2025-10-14 09:43:10] 2025-10-14 00:42:38,421 | INFO     | ..............................
[2025-10-14 09:43:10] 2025-10-14 00:42:38,859 | INFO     | 
[2025-10-14 09:43:10] 2025-10-14 00:42:38,859 | INFO     | job summary report
[2025-10-14 09:43:10] 2025-10-14 00:42:38,859 | INFO     | --------------------------------------------------
[2025-10-14 09:43:10] 2025-10-14 00:42:38,859 | INFO     | PanDA job id: 6837707067
[2025-10-14 09:43:10] 2025-10-14 00:42:38,860 | INFO     | task id: 46676269
[2025-10-14 09:43:10] 2025-10-14 00:42:38,860 | INFO     | errors: (none)
[2025-10-14 09:43:10] 2025-10-14 00:42:38,860 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 09:43:10] 2025-10-14 00:42:38,860 | INFO     | pilot state: finished 
[2025-10-14 09:43:10] 2025-10-14 00:42:38,860 | INFO     | transexitcode: 0
[2025-10-14 09:43:10] 2025-10-14 00:42:38,860 | INFO     | exeerrorcode: 0
[2025-10-14 09:43:10] 2025-10-14 00:42:38,861 | INFO     | exeerrordiag: 
[2025-10-14 09:43:10] 2025-10-14 00:42:38,861 | INFO     | exitcode: 0
[2025-10-14 09:43:10] 2025-10-14 00:42:38,861 | INFO     | exitmsg: OK
[2025-10-14 09:43:10] 2025-10-14 00:42:38,861 | INFO     | cpuconsumptiontime: 26525 s
[2025-10-14 09:43:10] 2025-10-14 00:42:38,861 | INFO     | nevents: 400
[2025-10-14 09:43:10] 2025-10-14 00:42:38,861 | INFO     | neventsw: 0
[2025-10-14 09:43:10] 2025-10-14 00:42:38,862 | INFO     | pid: 4031795
[2025-10-14 09:43:10] 2025-10-14 00:42:38,862 | INFO     | pgrp: 4031795
[2025-10-14 09:43:10] 2025-10-14 00:42:38,862 | INFO     | corecount: 6
[2025-10-14 09:43:10] 2025-10-14 00:42:38,862 | INFO     | event service: False
[2025-10-14 09:43:10] 2025-10-14 00:42:38,862 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2349147, 11: 2349175, 4773: 2375485, 4775: 2384667, 4780: 2384805}
[2025-10-14 09:43:10] 2025-10-14 00:42:38,863 | INFO     | --------------------------------------------------
[2025-10-14 09:43:10] 2025-10-14 00:42:38,863 | INFO     | 
[2025-10-14 09:43:10] 2025-10-14 00:42:38,863 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | job 6837707067 has completed (purged errors)
[2025-10-14 09:43:10] 2025-10-14 00:42:38,873 | INFO     | overall cleanup function is called
[2025-10-14 09:43:10] 2025-10-14 00:42:39,879 | INFO     | --- collectZombieJob: --- 10, [4031795]
[2025-10-14 09:43:10] 2025-10-14 00:42:39,880 | INFO     | zombie collector waiting for pid 4031795
[2025-10-14 09:43:10] 2025-10-14 00:42:39,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 09:43:10] 2025-10-14 00:42:39,880 | INFO     | collected zombie processes
[2025-10-14 09:43:10] 2025-10-14 00:42:39,880 | INFO     | will attempt to kill all subprocesses of pid=4031795
[2025-10-14 09:43:10] 2025-10-14 00:42:39,921 | INFO     | process IDs to be killed: [4031795] (in reverse order)
[2025-10-14 09:43:10] 2025-10-14 00:42:39,942 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 09:43:10] 2025-10-14 00:42:39,942 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 09:43:10] 2025-10-14 00:42:39,943 | INFO     | did not find any defunct processes belonging to 4031795
[2025-10-14 09:43:10] 2025-10-14 00:42:39,944 | INFO     | did not find any defunct processes belonging to 4031795
[2025-10-14 09:43:10] 2025-10-14 00:42:39,944 | INFO     | ready for new job
[2025-10-14 09:43:10] 2025-10-14 00:42:39,944 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 09:43:10] 2025-10-14 00:42:39,945 | INFO     | ***************************************
[2025-10-14 09:43:10] 2025-10-14 00:42:39,945 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 09:43:10] 2025-10-14 00:42:39,945 | INFO     | ***************************************
[2025-10-14 09:43:10] 2025-10-14 00:42:39,945 | INFO     | 
[2025-10-14 09:43:10] 2025-10-14 00:42:39,945 | INFO     | architecture information:
[2025-10-14 09:43:10] 2025-10-14 00:42:39,945 | INFO     | executing command: cat /etc/os-release
[2025-10-14 09:43:10] 2025-10-14 00:42:39,951 | INFO     | cat /etc/os-release:
[2025-10-14 09:43:10] NAME="CentOS Linux"
[2025-10-14 09:43:10] VERSION="7 (Core)"
[2025-10-14 09:43:10] ID="centos"
[2025-10-14 09:43:10] ID_LIKE="rhel fedora"
[2025-10-14 09:43:10] VERSION_ID="7"
[2025-10-14 09:43:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 09:43:10] ANSI_COLOR="0;31"
[2025-10-14 09:43:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 09:43:10] HOME_URL="https://www.centos.org/"
[2025-10-14 09:43:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 09:43:10] 
[2025-10-14 09:43:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 09:43:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 09:43:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 09:43:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 09:43:10] 
[2025-10-14 09:43:10] 2025-10-14 00:42:39,951 | INFO     | ***************************************
[2025-10-14 09:43:10] 2025-10-14 00:42:40,454 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-14 09:43:10] 2025-10-14 00:42:40,476 | INFO     | sufficient remaining disk space (109521666048 B)
[2025-10-14 09:43:10] 2025-10-14 00:42:40,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 09:43:10] 2025-10-14 00:42:40,477 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 09:43:10] 2025-10-14 00:42:40,478 | INFO     | update_server=False
[2025-10-14 09:43:10] 2025-10-14 00:42:40,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 09:43:10] 2025-10-14 00:42:40,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 09:43:10] 2025-10-14 00:42:40,479 | INFO     | aborting loop
[2025-10-14 09:43:10] 2025-10-14 00:42:40,658 | INFO     | all job control threads have been joined
[2025-10-14 09:43:10] 2025-10-14 00:42:40,739 | INFO     | all data control threads have been joined
[2025-10-14 09:43:10] 2025-10-14 00:42:41,263 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 09:43:10] 2025-10-14 00:42:41,483 | INFO     | [job] retrieve thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:41,484 | INFO     | [job] job monitor thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:41,497 | INFO     | [job] validate thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:41,571 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:41,622 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:41,638 | INFO     | [data] copytool_in thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:41,664 | INFO     | [job] control thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:41,667 | INFO     | all payload control threads have been joined
[2025-10-14 09:43:10] 2025-10-14 00:42:41,745 | INFO     | [data] control thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:41,816 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:42,445 | INFO     | [payload] validate_post thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:42,673 | INFO     | [payload] control thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:42,949 | INFO     | [payload] failed_post thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:43,267 | INFO     | [data] copytool_out thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:43,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 09:43:10] 2025-10-14 00:42:43,788 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 09:43:10] 2025-10-14 00:42:44,465 | INFO     | [job] queue monitor thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:47,794 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:51,159 | INFO     | [monitor] cgroup control has ended
[2025-10-14 09:43:10] 2025-10-14 00:42:51,420 | INFO     | job.realtimelogging is not enabled
[2025-10-14 09:43:10] 2025-10-14 00:42:52,425 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 09:43:10] 2025-10-14 00:42:53,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140014082471744)>', '<ExcThread(monitor, started 140013417248512)>']
[2025-10-14 09:43:10] 2025-10-14 00:42:58,127 | INFO     | all workflow threads have been joined
[2025-10-14 09:43:10] 2025-10-14 00:42:58,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 09:43:10] 2025-10-14 00:42:58,127 | INFO     | traces error code: 0
[2025-10-14 09:43:10] 2025-10-14 00:42:58,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 09:43:10] 2025-10-14 00:43:10,809 | INFO     | PID=4019079 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 09:43:10] 2025-10-14 00:43:10,809 | INFO     | .. there are 2 such processes running
[2025-10-14 09:43:10] 2025-10-14 00:43:10,809 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 09:43:10] 2025-10-14 00:43:10,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 09:43:10] 2025-10-14 00:43:10,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 09:43:10] 2025-10-14 00:43:10,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 09:43:10] 2025-10-14 00:43:10,809 | INFO     | [monitor] control thread has ended
[2025-10-14 09:43:10] 2025-10-14 00:43:10,846 [wrapper] ==== pilot stdout END ====
[2025-10-14 09:43:10] 2025-10-14 00:43:10,847 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 09:43:10] 2025-10-14 00:43:10,848 [wrapper] pilotpid: 4019079
[2025-10-14 09:43:10] 2025-10-14 00:43:10,849 [wrapper] Pilot exit status: 0
[2025-10-14 09:43:10] 2025-10-14 00:43:10,853 [wrapper] pandaids: 6837707067
[2025-10-14 09:43:10] 2025-10-14 00:43:10,865 [wrapper] cleanup supervisor_pilot 4060210 4019080
[2025-10-14 09:43:10] 2025-10-14 00:43:10,866 [wrapper] Test setup, not cleaning
[2025-10-14 09:43:10] 2025-10-14 00:43:10,868 [wrapper] apfmon messages muted
[2025-10-14 09:43:10] 2025-10-14 00:43:10,868 [wrapper] ==== wrapper stdout END ====
[2025-10-14 09:43:10] 2025-10-14 00:43:10,869 [wrapper] ==== wrapper stderr END ====
[2025-10-14 09:43:10]  *** Error codes and diagnostics ***
[2025-10-14 09:43:10]     "exeErrorCode": 0,
[2025-10-14 09:43:10]     "exeErrorDiag": "",
[2025-10-14 09:43:10]     "pilotErrorCode": 0,
[2025-10-14 09:43:10]     "pilotErrorDiag": "",
[2025-10-14 09:43:10]  *** Listing of results directory ***
[2025-10-14 09:43:10] total 410672
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc    557409 Oct 11 03:18 pilot3.tar.gz
[2025-10-14 09:43:10] -rwx------. 1 boinc boinc     36292 Oct 11 03:37 runpilot2-wrapper.sh
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc      5112 Oct 11 03:37 queuedata.json
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc       100 Oct 14 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 09:43:10] -rwxr-xr-x. 1 boinc boinc      7986 Oct 14 08:22 run_atlas
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc       105 Oct 14 08:22 job.xml
[2025-10-14 09:43:10] -rw-r--r--. 2 boinc boinc 221920617 Oct 14 08:22 EVNT.46676267._001754.pool.root.1
[2025-10-14 09:43:10] -rw-r--r--. 2 boinc boinc     15120 Oct 14 08:22 start_atlas.sh
[2025-10-14 09:43:10] drwxrwx--x. 2 boinc boinc        68 Oct 14 08:22 shared
[2025-10-14 09:43:10] -rw-r--r--. 2 boinc boinc    569677 Oct 14 08:22 input.tar.gz
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc         0 Oct 14 08:22 boinc_lockfile
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc      2550 Oct 14 08:22 pandaJob.out
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc    972799 Oct 14 08:22 agis_schedconf.cvmfs.json
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc   1560580 Oct 14 08:22 agis_ddmendpoints.agis.ALL.json
[2025-10-14 09:43:10] drwx------. 5 boinc boinc      4096 Oct 14 08:22 pilot3
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc      9350 Oct 14 08:34 init_data.xml
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc       529 Oct 14 09:42 boinc_task_state.xml
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc 192675136 Oct 14 09:42 HITS.46676269._043332.pool.root.1
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc        95 Oct 14 09:42 pilot_heartbeat.json
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc      1018 Oct 14 09:42 memory_monitor_summary.json
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc    305798 Oct 14 09:42 log.46676269._043332.job.log.tgz.1
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc      7768 Oct 14 09:42 heartbeat.json
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc      8192 Oct 14 09:43 boinc_mmap_file
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc        27 Oct 14 09:43 wrapper_checkpoint.txt
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc       822 Oct 14 09:43 pilotlog.txt
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc    716291 Oct 14 09:43 log.46676269._043332.job.log.1
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc       357 Oct 14 09:43 output.list
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc       620 Oct 14 09:43 runtime_log
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc   1044480 Oct 14 09:43 result.tar.gz
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc       638 Oct 14 09:43 vGsMDmuAXR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmy7dNDmkIpuPm.diag
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc      8651 Oct 14 09:43 runtime_log.err
[2025-10-14 09:43:10] -rw-r--r--. 1 boinc boinc     21880 Oct 14 09:43 stderr.txt
[2025-10-14 09:43:10] HITS file was successfully produced:
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc 192675136 Oct 14 09:42 shared/HITS.pool.root.1
[2025-10-14 09:43:10]  *** Contents of shared directory: ***
[2025-10-14 09:43:10] total 406480
[2025-10-14 09:43:10] -rw-r--r--. 2 boinc boinc 221920617 Oct 14 08:22 ATLAS.root_0
[2025-10-14 09:43:10] -rw-r--r--. 2 boinc boinc     15120 Oct 14 08:22 start_atlas.sh
[2025-10-14 09:43:10] -rw-r--r--. 2 boinc boinc    569677 Oct 14 08:22 input.tar.gz
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc 192675136 Oct 14 09:42 HITS.pool.root.1
[2025-10-14 09:43:10] -rw-------. 1 boinc boinc   1044480 Oct 14 09:43 result.tar.gz
09:43:12 (4015277): run_atlas exited; CPU time 26576.456886
09:43:12 (4015277): called boinc_finish(0)

</stderr_txt>
]]>

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