Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:53:17 (2081506): wrapper (7.7.26015): starting
23:53:17 (2081506): wrapper: running run_atlas (--nthreads 11)
[2025-10-10 23:53:17] Arguments: --nthreads 11
[2025-10-10 23:53:17] Threads: 11
[2025-10-10 23:53:17] Checking for CVMFS
[2025-10-10 23:53:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 23:53:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 23:53:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 23:53:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 23:53:17] 2.13.2.0 3683012 10832 140372 151571 1 196 35325213 40960001 12634 16776704 0 111145934 99.819 55005370 32595 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 23:53:17] CVMFS is ok
[2025-10-10 23:53:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 23:53:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 23:53:17] Further information can be found at the LHC@home message board.
[2025-10-10 23:53:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 23:53:17] Checking for apptainer binary...
[2025-10-10 23:53:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 23:53:17] Running /usr/bin/apptainer --version
[2025-10-10 23:53:17] apptainer version 1.4.3-1.el9
[2025-10-10 23:53:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 23:53:17] c8-7-4.aglt2.org
[2025-10-10 23:53:17] apptainer works
[2025-10-10 23:53:17] Set ATHENA_PROC_NUMBER=11
[2025-10-10 23:53:17] Set ATHENA_CORE_NUMBER=11
[2025-10-10 23:53:17] Starting ATLAS job with PandaID=6837706383
[2025-10-10 23:53:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 00:30:36]  *** The last 200 lines of the pilot log: ***
[2025-10-11 00:30:36]  protocol_id=None
[2025-10-11 00:30:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-11 00:30:36]  replicas=None
[2025-10-11 00:30:36]  scope=mc23_13p6TeV
[2025-10-11 00:30:36]  status=None
[2025-10-11 00:30:36]  status_code=0
[2025-10-11 00:30:36]  storage_token=
[2025-10-11 00:30:36]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6837706383/log.46676269._042815.job.log.tgz.1
[2025-10-11 00:30:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/4c/log.46676269._042815.job.log.tgz.1
[2025-10-11 00:30:36]  workdir=None
[2025-10-11 00:30:36] ]
[2025-10-11 00:30:36] 2025-10-11 04:29:21,444 | INFO     | transferring file log.46676269._042815.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6837706383/log.46676269._042815.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-11 00:30:36] 2025-10-11 04:29:21,444 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6837706383/log.46676269._042815.job.log.tgz.1 /tmp/boinchome/slots/5/log.46676269._042815.job
[2025-10-11 00:30:36] 2025-10-11 04:29:21,458 | INFO     | adding to output.list: log.46676269._042815.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/4c/log.46676269._042815.job.log.tg
[2025-10-11 00:30:36] 2025-10-11 04:29:21,458 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-11 00:30:36] 2025-10-11 04:29:21,458 | INFO     | summary of transferred files:
[2025-10-11 00:30:36] 2025-10-11 04:29:21,458 | INFO     |  -- lfn=log.46676269._042815.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 00:30:36] 2025-10-11 04:29:21,459 | INFO     | stage-out finished correctly
[2025-10-11 00:30:36] 2025-10-11 04:29:22,328 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 00:30:36] 2025-10-11 04:29:23,181 | INFO     | time since job start (2157s) is within the limit (172800.0s)
[2025-10-11 00:30:36] 2025-10-11 04:29:25,044 | INFO     | job 6837706383 has state=finished
[2025-10-11 00:30:36] 2025-10-11 04:29:25,045 | INFO     | preparing for final server update for job 6837706383 in state='finished'
[2025-10-11 00:30:36] 2025-10-11 04:29:25,046 | INFO     | this job has now completed (state=finished)
[2025-10-11 00:30:36] 2025-10-11 04:29:25,046 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 00:30:36] 2025-10-11 04:29:25,046 | INFO     | log transfer has been attempted: DONE
[2025-10-11 00:30:36] 2025-10-11 04:29:25,046 | INFO     | job 6837706383 has finished - writing final server update
[2025-10-11 00:30:36] 2025-10-11 04:29:25,046 | INFO     | total number of processed events: 400 (read)
[2025-10-11 00:30:36] 2025-10-11 04:29:25,047 | INFO     | executing command: lscpu
[2025-10-11 00:30:36] 2025-10-11 04:29:25,113 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 00:30:36] 2025-10-11 04:29:25,187 | INFO     | time since job start (2159s) is within the limit (172800.0s)
[2025-10-11 00:30:36] 2025-10-11 04:29:26,602 | WARNING  | process 2091752 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 00:30:36] 2025-10-11 04:29:26,603 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6837706383/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 00:30:36] 2025-10-11 04:29:26,960 | INFO     | number of running child processes to parent process 2091752: 1
[2025-10-11 00:30:36] 2025-10-11 04:29:26,961 | INFO     | maximum number of monitored processes: 6
[2025-10-11 00:30:36] 2025-10-11 04:29:27,193 | INFO     | time since job start (2161s) is within the limit (172800.0s)
[2025-10-11 00:30:36] 2025-10-11 04:29:28,664 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-11 00:30:36] 2025-10-11 04:29:28,669 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3606.8160546874938
[2025-10-11 00:30:36] 2025-10-11 04:29:28,681 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6837706383/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 00:30:36] 2025-10-11 04:29:28,682 | INFO     | extracted standard info from prmon json
[2025-10-11 00:30:36] 2025-10-11 04:29:28,682 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 00:30:36] 2025-10-11 04:29:28,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 00:30:36] 2025-10-11 04:29:28,682 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 00:30:36] 2025-10-11 04:29:28,682 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | fitting pss+swap vs Time
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | sum of square deviations: 6798267.0
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | sum of deviations: -5299954.499999999
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | mean x: 1760155958.5
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | mean y: 2326436.464285714
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | -- intersect: 1374550636.0954397
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | intersect: 1374550636.0954397
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | chi2: 0.0014982039710993858
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | -- intersect: 1374550636.0954397
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | current memory leak: -0.78 B/s (using 28 data points, chi2=0.00)
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | could have reported an average CPU frequency of 3679 MHz (5 samples)
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | ..............................
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | . Timing measurements:
[2025-10-11 00:30:36] 2025-10-11 04:29:28,683 | INFO     | . get job = 0 s
[2025-10-11 00:30:36] 2025-10-11 04:29:28,684 | INFO     | . initial setup = 2 s
[2025-10-11 00:30:36] 2025-10-11 04:29:28,684 | INFO     | . payload setup = 4 s
[2025-10-11 00:30:36] 2025-10-11 04:29:28,684 | INFO     | . stage-in = 0 s
[2025-10-11 00:30:36] 2025-10-11 04:29:28,684 | INFO     | . payload execution = 2131 s
[2025-10-11 00:30:36] 2025-10-11 04:29:28,684 | INFO     | . stage-out = 0 s
[2025-10-11 00:30:36] 2025-10-11 04:29:28,684 | INFO     | . log creation = 0 s
[2025-10-11 00:30:36] 2025-10-11 04:29:28,684 | INFO     | ..............................
[2025-10-11 00:30:36] 2025-10-11 04:29:28,737 | INFO     | 
[2025-10-11 00:30:36] 2025-10-11 04:29:28,737 | INFO     | job summary report
[2025-10-11 00:30:36] 2025-10-11 04:29:28,737 | INFO     | --------------------------------------------------
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | PanDA job id: 6837706383
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | task id: 46676269
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | errors: (none)
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | pilot state: finished 
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | transexitcode: 0
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | exeerrorcode: 0
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | exeerrordiag: 
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | exitcode: 0
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | exitmsg: OK
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | cpuconsumptiontime: 20710 s
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | nevents: 400
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | neventsw: 0
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | pid: 2091752
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | pgrp: 2091752
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | corecount: 11
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | event service: False
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 2139: 2374270, 2141: 2383324, 2148: 2383494}
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | --------------------------------------------------
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | 
[2025-10-11 00:30:36] 2025-10-11 04:29:28,738 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,752 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 00:30:36] 2025-10-11 04:29:28,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,753 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 00:30:36] 2025-10-11 04:29:28,753 | INFO     | job 6837706383 has completed (purged errors)
[2025-10-11 00:30:36] 2025-10-11 04:29:28,753 | INFO     | overall cleanup function is called
[2025-10-11 00:30:36] 2025-10-11 04:29:29,760 | INFO     | --- collectZombieJob: --- 10, [2091752]
[2025-10-11 00:30:36] 2025-10-11 04:29:29,760 | INFO     | zombie collector waiting for pid 2091752
[2025-10-11 00:30:36] 2025-10-11 04:29:29,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 00:30:36] 2025-10-11 04:29:29,760 | INFO     | collected zombie processes
[2025-10-11 00:30:36] 2025-10-11 04:29:29,761 | INFO     | will attempt to kill all subprocesses of pid=2091752
[2025-10-11 00:30:36] 2025-10-11 04:29:30,127 | INFO     | process IDs to be killed: [2091752] (in reverse order)
[2025-10-11 00:30:36] 2025-10-11 04:29:30,259 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 00:30:36] 2025-10-11 04:29:30,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 00:30:36] 2025-10-11 04:29:30,278 | INFO     | did not find any defunct processes belonging to 2091752
[2025-10-11 00:30:36] 2025-10-11 04:29:30,293 | INFO     | did not find any defunct processes belonging to 2091752
[2025-10-11 00:30:36] 2025-10-11 04:29:30,293 | INFO     | ready for new job
[2025-10-11 00:30:36] 2025-10-11 04:29:30,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 00:30:36] 2025-10-11 04:29:30,294 | INFO     | ***************************************
[2025-10-11 00:30:36] 2025-10-11 04:29:30,295 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 00:30:36] 2025-10-11 04:29:30,295 | INFO     | ***************************************
[2025-10-11 00:30:36] 2025-10-11 04:29:30,295 | INFO     | 
[2025-10-11 00:30:36] 2025-10-11 04:29:30,312 | INFO     | architecture information:
[2025-10-11 00:30:36] 2025-10-11 04:29:30,312 | INFO     | executing command: cat /etc/os-release
[2025-10-11 00:30:36] 2025-10-11 04:29:30,324 | INFO     | cat /etc/os-release:
[2025-10-11 00:30:36] NAME="CentOS Linux"
[2025-10-11 00:30:36] VERSION="7 (Core)"
[2025-10-11 00:30:36] ID="centos"
[2025-10-11 00:30:36] ID_LIKE="rhel fedora"
[2025-10-11 00:30:36] VERSION_ID="7"
[2025-10-11 00:30:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 00:30:36] ANSI_COLOR="0;31"
[2025-10-11 00:30:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 00:30:36] HOME_URL="https://www.centos.org/"
[2025-10-11 00:30:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 00:30:36] 
[2025-10-11 00:30:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 00:30:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 00:30:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 00:30:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 00:30:36] 
[2025-10-11 00:30:36] 2025-10-11 04:29:30,324 | INFO     | ***************************************
[2025-10-11 00:30:36] 2025-10-11 04:29:30,827 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-11 00:30:36] 2025-10-11 04:29:30,842 | INFO     | sufficient remaining disk space (167979778048 B)
[2025-10-11 00:30:36] 2025-10-11 04:29:30,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 00:30:36] 2025-10-11 04:29:30,842 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 00:30:36] 2025-10-11 04:29:30,842 | INFO     | update_server=False
[2025-10-11 00:30:36] 2025-10-11 04:29:30,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 00:30:36] 2025-10-11 04:29:30,842 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 00:30:36] 2025-10-11 04:29:30,843 | INFO     | aborting loop
[2025-10-11 00:30:36] 2025-10-11 04:29:31,212 | INFO     | all payload control threads have been joined
[2025-10-11 00:30:36] 2025-10-11 04:29:31,384 | INFO     | all data control threads have been joined
[2025-10-11 00:30:36] 2025-10-11 04:29:31,848 | INFO     | [job] retrieve thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:31,848 | INFO     | [job] job monitor thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:31,915 | INFO     | [data] copytool_in thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:31,962 | INFO     | all job control threads have been joined
[2025-10-11 00:30:36] 2025-10-11 04:29:31,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 00:30:36] 2025-10-11 04:29:32,218 | INFO     | [payload] control thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:32,261 | INFO     | [payload] validate_post thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:32,390 | INFO     | [data] control thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:32,542 | INFO     | [job] validate thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:32,628 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:32,759 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:32,847 | INFO     | [payload] failed_post thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:32,887 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 00:30:36] 2025-10-11 04:29:32,966 | INFO     | [job] control thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:33,010 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:33,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 00:30:36] 2025-10-11 04:29:34,005 | INFO     | [data] copytool_out thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:34,753 | INFO     | [job] queue monitor thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:36,892 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:29:41,021 | INFO     | job.realtimelogging is not enabled
[2025-10-11 00:30:36] 2025-10-11 04:29:42,027 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 00:30:36] 2025-10-11 04:30:00,735 | INFO     | PID=2085331 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 00:30:36] 2025-10-11 04:30:00,736 | INFO     | .. there are 17 such processes running
[2025-10-11 00:30:36] 2025-10-11 04:30:00,736 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 00:30:36] 2025-10-11 04:30:00,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 00:30:36] 2025-10-11 04:30:00,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 00:30:36] 2025-10-11 04:30:29,711 | INFO     | [monitor] cgroup control has ended
[2025-10-11 00:30:36] 2025-10-11 04:30:31,145 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913704396608)>', '<ExcThread(monitor, started 139912888170240)>']
[2025-10-11 00:30:36] 2025-10-11 04:30:31,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 00:30:36] 2025-10-11 04:30:31,886 | INFO     | [monitor] control thread has ended
[2025-10-11 00:30:36] 2025-10-11 04:30:36,166 | INFO     | all workflow threads have been joined
[2025-10-11 00:30:36] 2025-10-11 04:30:36,166 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 00:30:36] 2025-10-11 04:30:36,166 | INFO     | traces error code: 0
[2025-10-11 00:30:36] 2025-10-11 04:30:36,166 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 00:30:36] 2025-10-11 04:30:36,239 [wrapper] ==== pilot stdout END ====
[2025-10-11 00:30:36] 2025-10-11 04:30:36,241 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 00:30:36] 2025-10-11 04:30:36,242 [wrapper] pilotpid: 2085331
[2025-10-11 00:30:36] 2025-10-11 04:30:36,244 [wrapper] Pilot exit status: 0
[2025-10-11 00:30:36] 2025-10-11 04:30:36,252 [wrapper] pandaids: 6837706383
[2025-10-11 00:30:36] 2025-10-11 04:30:36,343 [wrapper] cleanup supervisor_pilot 2332537 2085332
[2025-10-11 00:30:36] 2025-10-11 04:30:36,345 [wrapper] Test setup, not cleaning
[2025-10-11 00:30:36] 2025-10-11 04:30:36,347 [wrapper] apfmon messages muted
[2025-10-11 00:30:36] 2025-10-11 04:30:36,349 [wrapper] ==== wrapper stdout END ====
[2025-10-11 00:30:36] 2025-10-11 04:30:36,351 [wrapper] ==== wrapper stderr END ====
[2025-10-11 00:30:36]  *** Error codes and diagnostics ***
[2025-10-11 00:30:36]     "exeErrorCode": 0,
[2025-10-11 00:30:36]     "exeErrorDiag": "",
[2025-10-11 00:30:36]     "pilotErrorCode": 0,
[2025-10-11 00:30:36]     "pilotErrorDiag": "",
[2025-10-11 00:30:36]  *** Listing of results directory ***
[2025-10-11 00:30:36] total 407012
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 14:07 pilot3.tar.gz
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 14:07 queuedata.json
[2025-10-11 00:30:36] -rwx------. 1 boincer umatlas     36292 Oct 10 14:07 runpilot2-wrapper.sh
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas       100 Oct 10 23:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 00:30:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 23:53 run_atlas
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas       105 Oct 10 23:53 job.xml
[2025-10-11 00:30:36] -rw-r--r--. 2 boincer umatlas 218698297 Oct 10 23:53 EVNT.46676267._001734.pool.root.1
[2025-10-11 00:30:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 23:53 start_atlas.sh
[2025-10-11 00:30:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 23:53 shared
[2025-10-11 00:30:36] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 23:53 input.tar.gz
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas         0 Oct 10 23:53 boinc_lockfile
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 23:53 pandaJob.out
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas    975509 Oct 10 23:53 agis_schedconf.cvmfs.json
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas   1560580 Oct 10 23:53 agis_ddmendpoints.agis.ALL.json
[2025-10-11 00:30:36] drwx------. 5 boincer umatlas      4096 Oct 10 23:53 pilot3
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas      7163 Oct 11 00:27 init_data.xml
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas 192831418 Oct 11 00:28 HITS.46676269._042815.pool.root.1
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas       529 Oct 11 00:28 boinc_task_state.xml
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas        95 Oct 11 00:29 pilot_heartbeat.json
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas      1028 Oct 11 00:29 memory_monitor_summary.json
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas    326705 Oct 11 00:29 log.46676269._042815.job.log.tgz.1
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas      7760 Oct 11 00:29 heartbeat.json
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 00:30 boinc_mmap_file
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas        27 Oct 11 00:30 wrapper_checkpoint.txt
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas      4897 Oct 11 00:30 pilotlog.txt
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas    346010 Oct 11 00:30 log.46676269._042815.job.log.1
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas       357 Oct 11 00:30 output.list
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas       620 Oct 11 00:30 runtime_log
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas    696320 Oct 11 00:30 result.tar.gz
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas      8695 Oct 11 00:30 runtime_log.err
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas       649 Oct 11 00:30 MZaLDmrhWR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmh3dNDm5uM5fn.diag
[2025-10-11 00:30:36] -rw-r--r--. 1 boincer umatlas     21762 Oct 11 00:30 stderr.txt
[2025-10-11 00:30:36] HITS file was successfully produced:
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas 192831418 Oct 11 00:28 shared/HITS.pool.root.1
[2025-10-11 00:30:36]  *** Contents of shared directory: ***
[2025-10-11 00:30:36] total 403148
[2025-10-11 00:30:36] -rw-r--r--. 2 boincer umatlas 218698297 Oct 10 23:53 ATLAS.root_0
[2025-10-11 00:30:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 23:53 start_atlas.sh
[2025-10-11 00:30:36] -rw-r--r--. 2 boincer umatlas    569678 Oct 10 23:53 input.tar.gz
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas 192831418 Oct 11 00:28 HITS.pool.root.1
[2025-10-11 00:30:36] -rw-------. 1 boincer umatlas    696320 Oct 11 00:30 result.tar.gz
00:30:37 (2081506): run_atlas exited; CPU time 20754.260785
00:30:37 (2081506): called boinc_finish(0)

</stderr_txt>
]]>

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