Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:40:06 (3445593): wrapper (7.7.26015): starting
02:40:06 (3445593): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 02:40:06] Arguments: --nthreads 4
[2025-10-12 02:40:06] Threads: 4
[2025-10-12 02:40:06] Checking for CVMFS
[2025-10-12 02:40:06] No cvmfs_config command found, will try listing directly
[2025-10-12 02:40:06] CVMFS is ok
[2025-10-12 02:40:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:40:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:40:06] Further information can be found at the LHC@home message board.
[2025-10-12 02:40:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:40:06] Checking for apptainer binary...
[2025-10-12 02:40:06] which: no apptainer in ((null))
[2025-10-12 02:40:06] apptainer is not installed, using version from CVMFS
[2025-10-12 02:40:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:40:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-10-12 02:40:06] apptainer works
[2025-10-12 02:40:06] Set ATHENA_PROC_NUMBER=4
[2025-10-12 02:40:06] Set ATHENA_CORE_NUMBER=4
[2025-10-12 02:40:06] Starting ATLAS job with PandaID=6837828549
[2025-10-12 02:40:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:25:07]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:25:07] 2025-10-12 03:23:08,895 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:25:07] 2025-10-12 03:23:08,895 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:25:07] 2025-10-12 03:23:08,898 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:25:07] 2025-10-12 03:23:08,899 | INFO     | sum of square deviations: 1270051720.0
[2025-10-12 05:25:07] 2025-10-12 03:23:08,900 | INFO     | sum of deviations: 7383252668.999996
[2025-10-12 05:25:07] 2025-10-12 03:23:08,900 | INFO     | mean x: 1760234504.5
[2025-10-12 05:25:07] 2025-10-12 03:23:08,900 | INFO     | mean y: 2292415.9
[2025-10-12 05:25:07] 2025-10-12 03:23:08,900 | INFO     | -- intersect: -10230563379.465178
[2025-10-12 05:25:07] 2025-10-12 03:23:08,900 | INFO     | intersect: -10230563379.465178
[2025-10-12 05:25:07] 2025-10-12 03:23:08,900 | INFO     | chi2: 2.08245660681047
[2025-10-12 05:25:07] 2025-10-12 03:23:08,901 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 05:25:07] 2025-10-12 03:23:08,902 | INFO     | sum of deviations: 16993862448.999996
[2025-10-12 05:25:07] 2025-10-12 03:23:08,902 | INFO     | mean x: 1760234352.0
[2025-10-12 05:25:07] 2025-10-12 03:23:08,902 | INFO     | mean y: 2304782.580645161
[2025-10-12 05:25:07] 2025-10-12 03:23:08,902 | INFO     | -- intersect: -25904100154.293682
[2025-10-12 05:25:07] 2025-10-12 03:23:08,902 | INFO     | intersect: -25904100154.293682
[2025-10-12 05:25:07] 2025-10-12 03:23:08,902 | INFO     | chi2: 1.2760729348045963
[2025-10-12 05:25:07] 2025-10-12 03:23:08,902 | INFO     | current chi2=1.2760729348045963 (change=38.72271188598481 %)
[2025-10-12 05:25:07] 2025-10-12 03:23:08,903 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 05:25:07] 2025-10-12 03:23:08,903 | INFO     | sum of deviations: 16430018129.499994
[2025-10-12 05:25:07] 2025-10-12 03:23:08,904 | INFO     | mean x: 1760234199.5
[2025-10-12 05:25:07] 2025-10-12 03:23:08,904 | INFO     | mean y: 2303987.8466666667
[2025-10-12 05:25:07] 2025-10-12 03:23:08,904 | INFO     | -- intersect: -27633722390.369774
[2025-10-12 05:25:07] 2025-10-12 03:23:08,904 | INFO     | intersect: -27633722390.369774
[2025-10-12 05:25:07] 2025-10-12 03:23:08,904 | INFO     | chi2: 1.2771866248847177
[2025-10-12 05:25:07] 2025-10-12 03:23:08,904 | INFO     | current chi2=1.2771866248847177 (change=-0.08727479830860516 %)
[2025-10-12 05:25:07] 2025-10-12 03:23:08,904 | INFO     | right removable region: 149
[2025-10-12 05:25:07] 2025-10-12 03:23:08,905 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 05:25:07] 2025-10-12 03:23:08,906 | INFO     | sum of deviations: -11862608268.0
[2025-10-12 05:25:07] 2025-10-12 03:23:08,906 | INFO     | mean x: 1760234657.0
[2025-10-12 05:25:07] 2025-10-12 03:23:08,906 | INFO     | mean y: 2317436.1806451613
[2025-10-12 05:25:07] 2025-10-12 03:23:08,906 | INFO     | -- intersect: 18086351455.53607
[2025-10-12 05:25:07] 2025-10-12 03:23:08,906 | INFO     | intersect: 18086351455.53607
[2025-10-12 05:25:07] 2025-10-12 03:23:08,906 | INFO     | chi2: 0.8359774548346004
[2025-10-12 05:25:07] 2025-10-12 03:23:08,906 | INFO     | current chi2=0.8359774548346004 (change=59.85618849868861 %)
[2025-10-12 05:25:07] 2025-10-12 03:23:08,907 | INFO     | sum of square deviations: 1046484737.5
[2025-10-12 05:25:07] 2025-10-12 03:23:08,908 | INFO     | sum of deviations: -11715156170.499998
[2025-10-12 05:25:07] 2025-10-12 03:23:08,908 | INFO     | mean x: 1760234809.5
[2025-10-12 05:25:07] 2025-10-12 03:23:08,908 | INFO     | mean y: 2317223.7133333334
[2025-10-12 05:25:07] 2025-10-12 03:23:08,908 | INFO     | -- intersect: 19707741441.65881
[2025-10-12 05:25:07] 2025-10-12 03:23:08,908 | INFO     | intersect: 19707741441.65881
[2025-10-12 05:25:07] 2025-10-12 03:23:08,908 | INFO     | chi2: 0.8361825377749332
[2025-10-12 05:25:07] 2025-10-12 03:23:08,908 | INFO     | current chi2=0.8361825377749332 (change=-0.02453211377254315 %)
[2025-10-12 05:25:07] 2025-10-12 03:23:08,908 | INFO     | left removable region: 20
[2025-10-12 05:25:07] 2025-10-12 03:23:08,909 | INFO     | sum of square deviations: 665612480.0
[2025-10-12 05:25:07] 2025-10-12 03:23:08,909 | INFO     | sum of deviations: -1087924141.9999995
[2025-10-12 05:25:07] 2025-10-12 03:23:08,909 | INFO     | mean x: 1760234779.0
[2025-10-12 05:25:07] 2025-10-12 03:23:08,910 | INFO     | mean y: 2329609.968992248
[2025-10-12 05:25:07] 2025-10-12 03:23:08,910 | INFO     | -- intersect: 2879381902.7116613
[2025-10-12 05:25:07] 2025-10-12 03:23:08,910 | INFO     | intersect: 2879381902.7116613
[2025-10-12 05:25:07] 2025-10-12 03:23:08,910 | INFO     | chi2: 0.004435343580819442
[2025-10-12 05:25:07] 2025-10-12 03:23:08,910 | INFO     | -- intersect: 2879381902.7116613
[2025-10-12 05:25:07] 2025-10-12 03:23:08,910 | INFO     | current memory leak: -1.63 B/s (using 129 data points, chi2=0.00)
[2025-10-12 05:25:07] 2025-10-12 03:23:08,911 | INFO     | could have reported an average CPU frequency of 2697 MHz (9 samples)
[2025-10-12 05:25:07] 2025-10-12 03:23:08,911 | INFO     | ..............................
[2025-10-12 05:25:07] 2025-10-12 03:23:08,911 | INFO     | . Timing measurements:
[2025-10-12 05:25:07] 2025-10-12 03:23:08,911 | INFO     | . get job = 0 s
[2025-10-12 05:25:07] 2025-10-12 03:23:08,911 | INFO     | . initial setup = 1 s
[2025-10-12 05:25:07] 2025-10-12 03:23:08,911 | INFO     | . payload setup = 8 s
[2025-10-12 05:25:07] 2025-10-12 03:23:08,911 | INFO     | . stage-in = 0 s
[2025-10-12 05:25:07] 2025-10-12 03:23:08,911 | INFO     | . payload execution = 9729 s
[2025-10-12 05:25:07] 2025-10-12 03:23:08,911 | INFO     | . stage-out = 0 s
[2025-10-12 05:25:07] 2025-10-12 03:23:08,911 | INFO     | . log creation = 0 s
[2025-10-12 05:25:07] 2025-10-12 03:23:08,912 | INFO     | ..............................
[2025-10-12 05:25:07] 2025-10-12 03:23:09,014 | INFO     | 
[2025-10-12 05:25:07] 2025-10-12 03:23:09,014 | INFO     | job summary report
[2025-10-12 05:25:07] 2025-10-12 03:23:09,014 | INFO     | --------------------------------------------------
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | PanDA job id: 6837828549
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | task id: 46676269
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | errors: (none)
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | pilot state: finished 
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | transexitcode: 0
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | exeerrorcode: 0
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | exeerrordiag: 
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | exitcode: 0
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | exitmsg: OK
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | cpuconsumptiontime: 37264 s
[2025-10-12 05:25:07] 2025-10-12 03:23:09,015 | INFO     | nevents: 400
[2025-10-12 05:25:07] 2025-10-12 03:23:09,016 | INFO     | neventsw: 0
[2025-10-12 05:25:07] 2025-10-12 03:23:09,016 | INFO     | pid: 3469174
[2025-10-12 05:25:07] 2025-10-12 03:23:09,016 | INFO     | pgrp: 3469174
[2025-10-12 05:25:07] 2025-10-12 03:23:09,016 | INFO     | corecount: 4
[2025-10-12 05:25:07] 2025-10-12 03:23:09,016 | INFO     | event service: False
[2025-10-12 05:25:07] 2025-10-12 03:23:09,016 | INFO     | sizes: {0: 2348590, 1: 2348845, 8: 2349107, 12: 2349135, 9742: 2378130, 9743: 2387150, 9744: 2387334, 9750: 2387592}
[2025-10-12 05:25:07] 2025-10-12 03:23:09,016 | INFO     | --------------------------------------------------
[2025-10-12 05:25:07] 2025-10-12 03:23:09,016 | INFO     | 
[2025-10-12 05:25:07] 2025-10-12 03:23:09,016 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2025-10-12 05:25:07] 2025-10-12 03:23:09,051 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,051 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,052 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,052 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,052 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,053 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:25:07] 2025-10-12 03:23:09,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,053 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:25:07] 2025-10-12 03:23:09,053 | INFO     | job 6837828549 has completed (purged errors)
[2025-10-12 05:25:07] 2025-10-12 03:23:09,054 | INFO     | overall cleanup function is called
[2025-10-12 05:25:07] 2025-10-12 03:23:10,062 | INFO     | --- collectZombieJob: --- 10, [3469174]
[2025-10-12 05:25:07] 2025-10-12 03:23:10,062 | INFO     | zombie collector waiting for pid 3469174
[2025-10-12 05:25:07] 2025-10-12 03:23:10,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:25:07] 2025-10-12 03:23:10,062 | INFO     | collected zombie processes
[2025-10-12 05:25:07] 2025-10-12 03:23:10,062 | INFO     | will attempt to kill all subprocesses of pid=3469174
[2025-10-12 05:25:07] 2025-10-12 03:23:10,879 | INFO     | process IDs to be killed: [3469174] (in reverse order)
[2025-10-12 05:25:07] 2025-10-12 03:23:11,124 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:25:07] 2025-10-12 03:23:11,124 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:25:07] 2025-10-12 03:23:11,154 | INFO     | did not find any defunct processes belonging to 3469174
[2025-10-12 05:25:07] 2025-10-12 03:23:11,183 | INFO     | did not find any defunct processes belonging to 3469174
[2025-10-12 05:25:07] 2025-10-12 03:23:11,183 | INFO     | ready for new job
[2025-10-12 05:25:07] 2025-10-12 03:23:11,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:25:07] 2025-10-12 03:23:11,186 | INFO     | ***************************************
[2025-10-12 05:25:07] 2025-10-12 03:23:11,186 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:25:07] 2025-10-12 03:23:11,186 | INFO     | ***************************************
[2025-10-12 05:25:07] 2025-10-12 03:23:11,186 | INFO     | 
[2025-10-12 05:25:07] 2025-10-12 03:23:11,194 | INFO     | architecture information:
[2025-10-12 05:25:07] 2025-10-12 03:23:11,195 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:25:07] 2025-10-12 03:23:11,216 | INFO     | cat /etc/os-release:
[2025-10-12 05:25:07] NAME="CentOS Linux"
[2025-10-12 05:25:07] VERSION="7 (Core)"
[2025-10-12 05:25:07] ID="centos"
[2025-10-12 05:25:07] ID_LIKE="rhel fedora"
[2025-10-12 05:25:07] VERSION_ID="7"
[2025-10-12 05:25:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:25:07] ANSI_COLOR="0;31"
[2025-10-12 05:25:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:25:07] HOME_URL="https://www.centos.org/"
[2025-10-12 05:25:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:25:07] 
[2025-10-12 05:25:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:25:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:25:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:25:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:25:07] 
[2025-10-12 05:25:07] 2025-10-12 03:23:11,216 | INFO     | ***************************************
[2025-10-12 05:25:07] 2025-10-12 03:23:11,718 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2025-10-12 05:25:07] 2025-10-12 03:23:11,740 | INFO     | sufficient remaining disk space (3343240921088 B)
[2025-10-12 05:25:07] 2025-10-12 03:23:11,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:25:07] 2025-10-12 03:23:11,741 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:25:07] 2025-10-12 03:23:11,741 | INFO     | update_server=False
[2025-10-12 05:25:07] 2025-10-12 03:23:11,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:25:07] 2025-10-12 03:23:11,741 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:25:07] 2025-10-12 03:23:11,742 | INFO     | aborting loop
[2025-10-12 05:25:07] 2025-10-12 03:23:11,948 | INFO     | all data control threads have been joined
[2025-10-12 05:25:07] 2025-10-12 03:23:12,058 | INFO     | all payload control threads have been joined
[2025-10-12 05:25:07] 2025-10-12 03:23:12,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:25:07] 2025-10-12 03:23:12,746 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:12,747 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:12,789 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:12,876 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:12,954 | INFO     | [data] control thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:12,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:25:07] 2025-10-12 03:23:12,962 | INFO     | all job control threads have been joined
[2025-10-12 05:25:07] 2025-10-12 03:23:13,022 | INFO     | [job] validate thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:13,063 | INFO     | [payload] control thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:13,207 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:13,286 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:13,425 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:13,487 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:13,967 | INFO     | [job] control thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:14,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:25:07] 2025-10-12 03:23:14,372 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:15,030 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:16,960 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:22,442 | INFO     | job.realtimelogging is not enabled
[2025-10-12 05:25:07] 2025-10-12 03:23:23,447 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:25:07] 2025-10-12 03:23:36,153 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:25:07] 2025-10-12 03:23:38,009 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22763029382976)>', '<ExcThread(monitor, started 22762447947520)>']
[2025-10-12 05:25:07] 2025-10-12 03:23:41,138 | INFO     | PID=3452609 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 05:25:07] 2025-10-12 03:23:41,138 | INFO     | .. there are 12 such processes running
[2025-10-12 05:25:07] 2025-10-12 03:23:41,138 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:25:07] 2025-10-12 03:23:41,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:25:07] 2025-10-12 03:23:41,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:25:07] 2025-10-12 03:23:41,139 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:25:07] 2025-10-12 03:23:41,139 | INFO     | [monitor] control thread has ended
[2025-10-12 05:25:07] 2025-10-12 03:23:43,034 | INFO     | all workflow threads have been joined
[2025-10-12 05:25:07] 2025-10-12 03:23:43,034 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:25:07] 2025-10-12 03:23:43,035 | INFO     | traces error code: 0
[2025-10-12 05:25:07] 2025-10-12 03:23:43,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:25:07] 2025-10-12 03:23:43,182 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:25:07] 2025-10-12 03:23:43,186 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:25:07] 2025-10-12 03:23:43,190 [wrapper] pilotpid: 3452609
[2025-10-12 05:25:07] 2025-10-12 03:23:43,194 [wrapper] Pilot exit status: 0
[2025-10-12 05:25:07] 2025-10-12 03:23:43,210 [wrapper] pandaids: 6837828549
[2025-10-12 05:25:07] 2025-10-12 03:23:43,395 [wrapper] cleanup supervisor_pilot 3808527 3452610
[2025-10-12 05:25:07] 2025-10-12 03:23:43,399 [wrapper] Test setup, not cleaning
[2025-10-12 05:25:07] 2025-10-12 03:23:43,403 [wrapper] apfmon messages muted
[2025-10-12 05:25:07] 2025-10-12 03:23:43,407 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:25:07] 2025-10-12 03:23:43,411 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:25:07]  *** Error codes and diagnostics ***
[2025-10-12 05:25:07]     "exeErrorCode": 0,
[2025-10-12 05:25:07]     "exeErrorDiag": "",
[2025-10-12 05:25:07]     "pilotErrorCode": 0,
[2025-10-12 05:25:07]     "pilotErrorDiag": "",
[2025-10-12 05:25:07]  *** Listing of results directory ***
[2025-10-12 05:25:07] total 406044
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc    557409 Oct 10 23:48 pilot3.tar.gz
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc      5112 Oct 10 23:58 queuedata.json
[2025-10-12 05:25:07] -rwx------ 1 boinc boinc     36292 Oct 10 23:59 runpilot2-wrapper.sh
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc       100 Oct 12 02:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:25:07] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 02:40 run_atlas
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc       105 Oct 12 02:40 job.xml
[2025-10-12 05:25:07] -rw-r--r-- 2 boinc boinc 221609180 Oct 12 02:40 EVNT.46676267._001860.pool.root.1
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc      6686 Oct 12 02:40 init_data.xml
[2025-10-12 05:25:07] -rw-r--r-- 2 boinc boinc     15120 Oct 12 02:40 start_atlas.sh
[2025-10-12 05:25:07] drwxrwx--x 2 boinc boinc      4096 Oct 12 02:40 shared
[2025-10-12 05:25:07] -rw-r--r-- 2 boinc boinc    569680 Oct 12 02:40 input.tar.gz
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc         0 Oct 12 02:40 boinc_lockfile
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc      2549 Oct 12 02:40 pandaJob.out
[2025-10-12 05:25:07] -rw------- 1 boinc boinc    975496 Oct 12 02:40 agis_schedconf.cvmfs.json
[2025-10-12 05:25:07] -rw------- 1 boinc boinc   1560580 Oct 12 02:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:25:07] drwx------ 5 boinc boinc      4096 Oct 12 02:40 pilot3
[2025-10-12 05:25:07] -rw------- 1 boinc boinc 186879947 Oct 12 05:22 HITS.46676269._046010.pool.root.1
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc       528 Oct 12 05:22 boinc_task_state.xml
[2025-10-12 05:25:07] -rw------- 1 boinc boinc      1025 Oct 12 05:22 memory_monitor_summary.json
[2025-10-12 05:25:07] -rw------- 1 boinc boinc    328530 Oct 12 05:23 log.46676269._046010.job.log.tgz.1
[2025-10-12 05:25:07] -rw------- 1 boinc boinc        95 Oct 12 05:23 pilot_heartbeat.json
[2025-10-12 05:25:07] -rw------- 1 boinc boinc      7781 Oct 12 05:23 heartbeat.json
[2025-10-12 05:25:07] -rw------- 1 boinc boinc      4908 Oct 12 05:23 pilotlog.txt
[2025-10-12 05:25:07] -rw------- 1 boinc boinc   1367783 Oct 12 05:23 log.46676269._046010.job.log.1
[2025-10-12 05:25:07] -rw------- 1 boinc boinc       357 Oct 12 05:23 output.list
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc       620 Oct 12 05:23 runtime_log
[2025-10-12 05:25:07] -rw------- 1 boinc boinc   1720320 Oct 12 05:23 result.tar.gz
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc      9069 Oct 12 05:23 runtime_log.err
[2025-10-12 05:25:07] -rw------- 1 boinc boinc       662 Oct 12 05:23 jQ7LDmYKaR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTZeNDmxqXCdm.diag
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc        26 Oct 12 05:24 wrapper_checkpoint.txt
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc      8192 Oct 12 05:25 boinc_mmap_file
[2025-10-12 05:25:07] -rw-r--r-- 1 boinc boinc     20676 Oct 12 05:25 stderr.txt
[2025-10-12 05:25:07] HITS file was successfully produced:
[2025-10-12 05:25:07] -rw------- 1 boinc boinc 186879947 Oct 12 05:22 shared/HITS.pool.root.1
[2025-10-12 05:25:07]  *** Contents of shared directory: ***
[2025-10-12 05:25:07] total 401180
[2025-10-12 05:25:07] -rw-r--r-- 2 boinc boinc 221609180 Oct 12 02:40 ATLAS.root_0
[2025-10-12 05:25:07] -rw-r--r-- 2 boinc boinc     15120 Oct 12 02:40 start_atlas.sh
[2025-10-12 05:25:07] -rw-r--r-- 2 boinc boinc    569680 Oct 12 02:40 input.tar.gz
[2025-10-12 05:25:07] -rw------- 1 boinc boinc 186879947 Oct 12 05:22 HITS.pool.root.1
[2025-10-12 05:25:07] -rw------- 1 boinc boinc   1720320 Oct 12 05:23 result.tar.gz
05:25:08 (3445593): run_atlas exited; CPU time 37864.681451
05:25:08 (3445593): called boinc_finish(0)

</stderr_txt>
]]>

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