Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:29:06 (6317): wrapper (7.7.26015): starting
23:29:06 (6317): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 23:29:06] Arguments: --nthreads 8
[2025-10-10 23:29:06] Threads: 8
[2025-10-10 23:29:06] Checking for CVMFS
[2025-10-10 23:29:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 23:29:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 23:29:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 23:29:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 23:29:07] 2.11.2.0 2827 220902 90420 151571 3 56 12812385 20275201 1 130560 1 77188138 99.978 13260255 12151 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 23:29:07] CVMFS is ok
[2025-10-10 23:29:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 23:29:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 23:29:07] Further information can be found at the LHC@home message board.
[2025-10-10 23:29:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 23:29:07] Checking for apptainer binary...
[2025-10-10 23:29:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 23:29:07] Running /usr/bin/apptainer --version
[2025-10-10 23:29:07] apptainer version 1.3.2-1.el7
[2025-10-10 23:29:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 23:29:08] c-115-13.aglt2.org
[2025-10-10 23:29:08] apptainer works
[2025-10-10 23:29:08] Set ATHENA_PROC_NUMBER=8
[2025-10-10 23:29:08] Set ATHENA_CORE_NUMBER=8
[2025-10-10 23:29:08] Starting ATLAS job with PandaID=6837828430
[2025-10-10 23:29:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:45:26 (31668): wrapper (7.7.26015): starting
23:45:26 (31668): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 23:45:26] Arguments: --nthreads 8
[2025-10-10 23:45:26] Threads: 8
[2025-10-10 23:45:26] This job has been restarted, cleaning up previous attempt
[2025-10-10 23:45:26] Checking for CVMFS
[2025-10-10 23:45:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 23:45:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 23:45:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 23:45:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 23:45:27] 2.11.2.0 2827 220919 89948 151571 3 188 12822024 20275201 1 130560 1 77248555 99.978 13260337 12151 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-10 23:45:27] CVMFS is ok
[2025-10-10 23:45:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 23:45:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 23:45:27] Further information can be found at the LHC@home message board.
[2025-10-10 23:45:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 23:45:27] Checking for apptainer binary...
[2025-10-10 23:45:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 23:45:27] Running /usr/bin/apptainer --version
[2025-10-10 23:45:27] apptainer version 1.3.2-1.el7
[2025-10-10 23:45:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 23:45:28] c-115-13.aglt2.org
[2025-10-10 23:45:28] apptainer works
[2025-10-10 23:45:28] Set ATHENA_PROC_NUMBER=8
[2025-10-10 23:45:28] Set ATHENA_CORE_NUMBER=8
[2025-10-10 23:45:28] Starting ATLAS job with PandaID=6837828430
[2025-10-10 23:45:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 01:40:20]  *** The last 200 lines of the pilot log: ***
[2025-10-11 01:40:20] 2025-10-11 05:39:47,905 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 01:40:20] 2025-10-11 05:39:47,906 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 01:40:20] 2025-10-11 05:39:47,906 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 01:40:20] 2025-10-11 05:39:47,909 | INFO     | fitting pss+swap vs Time
[2025-10-11 01:40:20] 2025-10-11 05:39:47,909 | INFO     | sum of square deviations: 435610028.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,910 | INFO     | sum of deviations: 4137552164.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,910 | INFO     | mean x: 1760157761.5
[2025-10-11 01:40:20] 2025-10-11 05:39:47,910 | INFO     | mean y: 2516243.1428571427
[2025-10-11 01:40:20] 2025-10-11 05:39:47,910 | INFO     | -- intersect: -16715979858.778198
[2025-10-11 01:40:20] 2025-10-11 05:39:47,910 | INFO     | intersect: -16715979858.778198
[2025-10-11 01:40:20] 2025-10-11 05:39:47,911 | INFO     | chi2: 1.5528790717484313
[2025-10-11 01:40:20] 2025-10-11 05:39:47,911 | INFO     | sum of square deviations: 379832238.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,911 | INFO     | sum of deviations: 4152505704.0000024
[2025-10-11 01:40:20] 2025-10-11 05:39:47,912 | INFO     | mean x: 1760157609.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,912 | INFO     | mean y: 2516284.9439252336
[2025-10-11 01:40:20] 2025-10-11 05:39:47,912 | INFO     | -- intersect: -19240359332.453003
[2025-10-11 01:40:20] 2025-10-11 05:39:47,912 | INFO     | intersect: -19240359332.453003
[2025-10-11 01:40:20] 2025-10-11 05:39:47,912 | INFO     | chi2: 1.5553246310686744
[2025-10-11 01:40:20] 2025-10-11 05:39:47,912 | INFO     | current chi2=1.5553246310686744 (change=-0.1574854967611557 %)
[2025-10-11 01:40:20] 2025-10-11 05:39:47,912 | INFO     | right removable region: 106
[2025-10-11 01:40:20] 2025-10-11 05:39:47,913 | INFO     | sum of square deviations: 379832238.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,913 | INFO     | sum of deviations: -11913901459.999998
[2025-10-11 01:40:20] 2025-10-11 05:39:47,913 | INFO     | mean x: 1760157914.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,913 | INFO     | mean y: 2559195.8971962617
[2025-10-11 01:40:20] 2025-10-11 05:39:47,913 | INFO     | -- intersect: 55212059189.51057
[2025-10-11 01:40:20] 2025-10-11 05:39:47,913 | INFO     | intersect: 55212059189.51057
[2025-10-11 01:40:20] 2025-10-11 05:39:47,914 | INFO     | chi2: 0.13578315201139074
[2025-10-11 01:40:20] 2025-10-11 05:39:47,914 | INFO     | current chi2=0.13578315201139074 (change=91.25603825296528 %)
[2025-10-11 01:40:20] 2025-10-11 05:39:47,914 | INFO     | sum of square deviations: 329031285.5
[2025-10-11 01:40:20] 2025-10-11 05:39:47,914 | INFO     | sum of deviations: -13262981120.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,915 | INFO     | mean x: 1760158066.5
[2025-10-11 01:40:20] 2025-10-11 05:39:47,915 | INFO     | mean y: 2563143.9411764704
[2025-10-11 01:40:20] 2025-10-11 05:39:47,915 | INFO     | -- intersect: 70953090443.28276
[2025-10-11 01:40:20] 2025-10-11 05:39:47,915 | INFO     | intersect: 70953090443.28276
[2025-10-11 01:40:20] 2025-10-11 05:39:47,915 | INFO     | chi2: 0.09870704531964113
[2025-10-11 01:40:20] 2025-10-11 05:39:47,915 | INFO     | current chi2=0.09870704531964113 (change=27.305380779965493 %)
[2025-10-11 01:40:20] 2025-10-11 05:39:47,915 | INFO     | sum of square deviations: 282974608.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,916 | INFO     | sum of deviations: -10410048696.000002
[2025-10-11 01:40:20] 2025-10-11 05:39:47,916 | INFO     | mean x: 1760158219.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,916 | INFO     | mean y: 2553676.1134020616
[2025-10-11 01:40:20] 2025-10-11 05:39:47,916 | INFO     | -- intersect: 64755122473.574684
[2025-10-11 01:40:20] 2025-10-11 05:39:47,916 | INFO     | intersect: 64755122473.574684
[2025-10-11 01:40:20] 2025-10-11 05:39:47,917 | INFO     | chi2: 0.09512908643666808
[2025-10-11 01:40:20] 2025-10-11 05:39:47,917 | INFO     | current chi2=0.09512908643666808 (change=3.6248262435438243 %)
[2025-10-11 01:40:20] 2025-10-11 05:39:47,917 | INFO     | left removable region: 30
[2025-10-11 01:40:20] 2025-10-11 05:39:47,917 | INFO     | sum of square deviations: 136095575.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,917 | INFO     | sum of deviations: -285632744.0
[2025-10-11 01:40:20] 2025-10-11 05:39:47,917 | INFO     | mean x: 1760158493.5
[2025-10-11 01:40:20] 2025-10-11 05:39:47,917 | INFO     | mean y: 2511242.8947368423
[2025-10-11 01:40:20] 2025-10-11 05:39:47,918 | INFO     | -- intersect: 3696671764.817004
[2025-10-11 01:40:20] 2025-10-11 05:39:47,918 | INFO     | intersect: 3696671764.817004
[2025-10-11 01:40:20] 2025-10-11 05:39:47,918 | INFO     | chi2: 0.013552321098806054
[2025-10-11 01:40:20] 2025-10-11 05:39:47,918 | INFO     | -- intersect: 3696671764.817004
[2025-10-11 01:40:20] 2025-10-11 05:39:47,918 | INFO     | current memory leak: -2.10 B/s (using 76 data points, chi2=0.01)
[2025-10-11 01:40:20] 2025-10-11 05:39:47,918 | INFO     | could have reported an average CPU frequency of 2107 MHz (7 samples)
[2025-10-11 01:40:20] 2025-10-11 05:39:47,919 | INFO     | ..............................
[2025-10-11 01:40:20] 2025-10-11 05:39:47,919 | INFO     | . Timing measurements:
[2025-10-11 01:40:20] 2025-10-11 05:39:47,919 | INFO     | . get job = 0 s
[2025-10-11 01:40:20] 2025-10-11 05:39:47,919 | INFO     | . initial setup = 1 s
[2025-10-11 01:40:20] 2025-10-11 05:39:47,919 | INFO     | . payload setup = 8 s
[2025-10-11 01:40:20] 2025-10-11 05:39:47,919 | INFO     | . stage-in = 0 s
[2025-10-11 01:40:20] 2025-10-11 05:39:47,919 | INFO     | . payload execution = 6805 s
[2025-10-11 01:40:20] 2025-10-11 05:39:47,919 | INFO     | . stage-out = 0 s
[2025-10-11 01:40:20] 2025-10-11 05:39:47,920 | INFO     | . log creation = 0 s
[2025-10-11 01:40:20] 2025-10-11 05:39:47,920 | INFO     | ..............................
[2025-10-11 01:40:20] 2025-10-11 05:39:48,003 | INFO     | 
[2025-10-11 01:40:20] 2025-10-11 05:39:48,003 | INFO     | job summary report
[2025-10-11 01:40:20] 2025-10-11 05:39:48,004 | INFO     | --------------------------------------------------
[2025-10-11 01:40:20] 2025-10-11 05:39:48,004 | INFO     | PanDA job id: 6837828430
[2025-10-11 01:40:20] 2025-10-11 05:39:48,004 | INFO     | task id: 46676269
[2025-10-11 01:40:20] 2025-10-11 05:39:48,004 | INFO     | errors: (none)
[2025-10-11 01:40:20] 2025-10-11 05:39:48,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 01:40:20] 2025-10-11 05:39:48,004 | INFO     | pilot state: finished 
[2025-10-11 01:40:20] 2025-10-11 05:39:48,005 | INFO     | transexitcode: 0
[2025-10-11 01:40:20] 2025-10-11 05:39:48,005 | INFO     | exeerrorcode: 0
[2025-10-11 01:40:20] 2025-10-11 05:39:48,005 | INFO     | exeerrordiag: 
[2025-10-11 01:40:20] 2025-10-11 05:39:48,005 | INFO     | exitcode: 0
[2025-10-11 01:40:20] 2025-10-11 05:39:48,005 | INFO     | exitmsg: OK
[2025-10-11 01:40:20] 2025-10-11 05:39:48,005 | INFO     | cpuconsumptiontime: 49382 s
[2025-10-11 01:40:20] 2025-10-11 05:39:48,006 | INFO     | nevents: 400
[2025-10-11 01:40:20] 2025-10-11 05:39:48,006 | INFO     | neventsw: 0
[2025-10-11 01:40:20] 2025-10-11 05:39:48,006 | INFO     | pid: 9627
[2025-10-11 01:40:20] 2025-10-11 05:39:48,006 | INFO     | pgrp: 9627
[2025-10-11 01:40:20] 2025-10-11 05:39:48,006 | INFO     | corecount: 8
[2025-10-11 01:40:20] 2025-10-11 05:39:48,006 | INFO     | event service: False
[2025-10-11 01:40:20] 2025-10-11 05:39:48,007 | INFO     | sizes: {0: 2348685, 1: 2348884, 7: 2349146, 12: 2349174, 6817: 2376265, 6819: 2385447, 6826: 2385585}
[2025-10-11 01:40:20] 2025-10-11 05:39:48,007 | INFO     | --------------------------------------------------
[2025-10-11 01:40:20] 2025-10-11 05:39:48,007 | INFO     | 
[2025-10-11 01:40:20] 2025-10-11 05:39:48,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 01:40:20] 2025-10-11 05:39:48,038 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,039 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,039 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,039 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,040 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,040 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,041 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,042 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 01:40:20] 2025-10-11 05:39:48,042 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,042 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 01:40:20] 2025-10-11 05:39:48,042 | INFO     | job 6837828430 has completed (purged errors)
[2025-10-11 01:40:20] 2025-10-11 05:39:48,042 | INFO     | overall cleanup function is called
[2025-10-11 01:40:20] 2025-10-11 05:39:49,051 | INFO     | --- collectZombieJob: --- 10, [9627]
[2025-10-11 01:40:20] 2025-10-11 05:39:49,051 | INFO     | zombie collector waiting for pid 9627
[2025-10-11 01:40:20] 2025-10-11 05:39:49,051 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 01:40:20] 2025-10-11 05:39:49,051 | INFO     | collected zombie processes
[2025-10-11 01:40:20] 2025-10-11 05:39:49,052 | INFO     | will attempt to kill all subprocesses of pid=9627
[2025-10-11 01:40:20] 2025-10-11 05:39:49,135 | INFO     | process IDs to be killed: [9627] (in reverse order)
[2025-10-11 01:40:20] 2025-10-11 05:39:49,192 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 01:40:20] 2025-10-11 05:39:49,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 01:40:20] 2025-10-11 05:39:49,197 | INFO     | did not find any defunct processes belonging to 9627
[2025-10-11 01:40:20] 2025-10-11 05:39:49,200 | INFO     | did not find any defunct processes belonging to 9627
[2025-10-11 01:40:20] 2025-10-11 05:39:49,200 | INFO     | ready for new job
[2025-10-11 01:40:20] 2025-10-11 05:39:49,200 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 01:40:20] 2025-10-11 05:39:49,201 | INFO     | ***************************************
[2025-10-11 01:40:20] 2025-10-11 05:39:49,202 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 01:40:20] 2025-10-11 05:39:49,202 | INFO     | ***************************************
[2025-10-11 01:40:20] 2025-10-11 05:39:49,202 | INFO     | 
[2025-10-11 01:40:20] 2025-10-11 05:39:49,202 | INFO     | architecture information:
[2025-10-11 01:40:20] 2025-10-11 05:39:49,203 | INFO     | executing command: cat /etc/os-release
[2025-10-11 01:40:20] 2025-10-11 05:39:49,220 | INFO     | cat /etc/os-release:
[2025-10-11 01:40:20] NAME="CentOS Linux"
[2025-10-11 01:40:20] VERSION="7 (Core)"
[2025-10-11 01:40:20] ID="centos"
[2025-10-11 01:40:20] ID_LIKE="rhel fedora"
[2025-10-11 01:40:20] VERSION_ID="7"
[2025-10-11 01:40:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 01:40:20] ANSI_COLOR="0;31"
[2025-10-11 01:40:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 01:40:20] HOME_URL="https://www.centos.org/"
[2025-10-11 01:40:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 01:40:20] 
[2025-10-11 01:40:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 01:40:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 01:40:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 01:40:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 01:40:20] 
[2025-10-11 01:40:20] 2025-10-11 05:39:49,220 | INFO     | ***************************************
[2025-10-11 01:40:20] 2025-10-11 05:39:49,723 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 01:40:20] 2025-10-11 05:39:49,744 | INFO     | sufficient remaining disk space (18596495360 B)
[2025-10-11 01:40:20] 2025-10-11 05:39:49,745 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 01:40:20] 2025-10-11 05:39:49,745 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 01:40:20] 2025-10-11 05:39:49,745 | INFO     | update_server=False
[2025-10-11 01:40:20] 2025-10-11 05:39:49,745 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 01:40:20] 2025-10-11 05:39:49,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 01:40:20] 2025-10-11 05:39:49,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 01:40:20] 2025-10-11 05:39:49,746 | INFO     | aborting loop
[2025-10-11 01:40:20] 2025-10-11 05:39:49,861 | INFO     | all job control threads have been joined
[2025-10-11 01:40:20] 2025-10-11 05:39:50,064 | INFO     | all payload control threads have been joined
[2025-10-11 01:40:20] 2025-10-11 05:39:50,539 | INFO     | all data control threads have been joined
[2025-10-11 01:40:20] 2025-10-11 05:39:50,748 | INFO     | [job] queue monitor thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:50,751 | INFO     | [job] retrieve thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:50,752 | INFO     | [job] job monitor thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:50,866 | INFO     | [job] control thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:50,875 | INFO     | [payload] failed_post thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:51,069 | INFO     | [payload] control thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:51,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 01:40:20] 2025-10-11 05:39:51,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 01:40:20] 2025-10-11 05:39:51,436 | INFO     | [payload] validate_post thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:51,544 | INFO     | [data] control thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:51,732 | INFO     | [job] validate thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:52,134 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:52,175 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:52,182 | INFO     | [data] copytool_in thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:52,188 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:53,093 | INFO     | [data] copytool_out thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:55,178 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:39:55,402 | INFO     | [monitor] cgroup control has ended
[2025-10-11 01:40:20] 2025-10-11 05:40:00,635 | INFO     | job.realtimelogging is not enabled
[2025-10-11 01:40:20] 2025-10-11 05:40:01,638 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 01:40:20] 2025-10-11 05:40:03,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236152846144)>', '<ExcThread(monitor, started 140235413370624)>']
[2025-10-11 01:40:20] 2025-10-11 05:40:08,048 | INFO     | all workflow threads have been joined
[2025-10-11 01:40:20] 2025-10-11 05:40:08,048 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 01:40:20] 2025-10-11 05:40:08,049 | INFO     | traces error code: 0
[2025-10-11 01:40:20] 2025-10-11 05:40:08,049 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 01:40:20] 2025-10-11 05:40:19,843 | INFO     | PID=3161 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-11 01:40:20] 2025-10-11 05:40:19,843 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 01:40:20] 2025-10-11 05:40:19,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 01:40:20] 2025-10-11 05:40:19,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 01:40:20] 2025-10-11 05:40:19,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 01:40:20] 2025-10-11 05:40:19,844 | INFO     | [monitor] control thread has ended
[2025-10-11 01:40:20] 2025-10-11 05:40:19,935 [wrapper] ==== pilot stdout END ====
[2025-10-11 01:40:20] 2025-10-11 05:40:19,939 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 01:40:20] 2025-10-11 05:40:19,943 [wrapper] pilotpid: 3161
[2025-10-11 01:40:20] 2025-10-11 05:40:19,947 [wrapper] Pilot exit status: 0
[2025-10-11 01:40:20] 2025-10-11 05:40:19,965 [wrapper] pandaids: 6837828430 6837828430
[2025-10-11 01:40:20] 2025-10-11 05:40:20,007 [wrapper] cleanup supervisor_pilot 11491 3162
[2025-10-11 01:40:20] 2025-10-11 05:40:20,012 [wrapper] Test setup, not cleaning
[2025-10-11 01:40:20] 2025-10-11 05:40:20,017 [wrapper] apfmon messages muted
[2025-10-11 01:40:20] 2025-10-11 05:40:20,022 [wrapper] ==== wrapper stdout END ====
[2025-10-11 01:40:20] 2025-10-11 05:40:20,026 [wrapper] ==== wrapper stderr END ====
[2025-10-11 01:40:20]  *** Error codes and diagnostics ***
[2025-10-11 01:40:20]     "exeErrorCode": 0,
[2025-10-11 01:40:20]     "exeErrorDiag": "",
[2025-10-11 01:40:20]     "pilotErrorCode": 0,
[2025-10-11 01:40:20]     "pilotErrorDiag": "",
[2025-10-11 01:40:20]  *** Listing of results directory ***
[2025-10-11 01:40:20] total 621768
[2025-10-11 01:40:20] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas      5112 Oct 10 17:48 queuedata.json
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas    557409 Oct 10 17:48 pilot3.tar.gz
[2025-10-11 01:40:20] -rwx------ 1 boincer umatlas     36292 Oct 10 17:51 runpilot2-wrapper.sh
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas       100 Oct 10 23:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 01:40:20] -rwxr-xr-x 1 boincer umatlas      7986 Oct 10 23:29 run_atlas
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas       105 Oct 10 23:29 job.xml
[2025-10-11 01:40:20] -rw-r--r-- 3 boincer umatlas 219687117 Oct 10 23:29 EVNT.46676267._001855.pool.root.1
[2025-10-11 01:40:20] -rw-r--r-- 3 boincer umatlas 219687117 Oct 10 23:29 ATLAS.root_0
[2025-10-11 01:40:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 23:29 start_atlas.sh
[2025-10-11 01:40:20] drwxrwx--x 2 boincer umatlas      4096 Oct 10 23:29 shared
[2025-10-11 01:40:20] -rw-r--r-- 2 boincer umatlas    569679 Oct 10 23:29 input.tar.gz
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas         0 Oct 10 23:29 boinc_lockfile
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas   1560580 Oct 10 23:29 agis_ddmendpoints.agis.ALL.json
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas      2549 Oct 10 23:45 pandaJob.out
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas    975509 Oct 10 23:45 agis_schedconf.cvmfs.json
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas      5910 Oct 11 01:38 init_data.xml
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas 190773133 Oct 11 01:39 HITS.46676269._045891.pool.root.1
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas       529 Oct 11 01:39 boinc_task_state.xml
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas      1047 Oct 11 01:39 memory_monitor_summary.json
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas    355383 Oct 11 01:39 log.46676269._045891.job.log.tgz.1
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas      7847 Oct 11 01:39 heartbeat.json
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas      8192 Oct 11 01:40 boinc_mmap_file
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas        27 Oct 11 01:40 wrapper_checkpoint.txt
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas       744 Oct 11 01:40 pilotlog.txt
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas        96 Oct 11 01:40 pilot_heartbeat.json
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas    965032 Oct 11 01:40 log.46676269._045891.job.log.1
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas       357 Oct 11 01:40 output.list
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas       620 Oct 11 01:40 runtime_log
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas   1341440 Oct 11 01:40 result.tar.gz
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas       783 Oct 11 01:40 yzTMDmfCaR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtXeNDmP7GYen.diag
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas      8788 Oct 11 01:40 runtime_log.err
[2025-10-11 01:40:20] -rw-r--r-- 1 boincer umatlas     22992 Oct 11 01:40 stderr.txt
[2025-10-11 01:40:20] HITS file was successfully produced:
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas 190773133 Oct 11 01:39 shared/HITS.pool.root.1
[2025-10-11 01:40:20]  *** Contents of shared directory: ***
[2025-10-11 01:40:20] total 402736
[2025-10-11 01:40:20] -rw-r--r-- 3 boincer umatlas 219687117 Oct 10 23:29 ATLAS.root_0
[2025-10-11 01:40:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 10 23:29 start_atlas.sh
[2025-10-11 01:40:20] -rw-r--r-- 2 boincer umatlas    569679 Oct 10 23:29 input.tar.gz
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas 190773133 Oct 11 01:39 HITS.pool.root.1
[2025-10-11 01:40:20] -rw------- 1 boincer umatlas   1341440 Oct 11 01:40 result.tar.gz
01:40:21 (31668): run_atlas exited; CPU time 49355.417131
01:40:21 (31668): called boinc_finish(0)

</stderr_txt>
]]>

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