Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:09 (1024248): wrapper (7.7.26015): starting
00:01:09 (1024248): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:01:09] Arguments: --nthreads 9
[2025-10-11 00:01:09] Threads: 9
[2025-10-11 00:01:09] Checking for CVMFS
[2025-10-11 00:01:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:01:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:01:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:01:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:01:11] 2.13.2.0 129118 107206 559972 151571 0 200 22439453 39288832 17946 16776704 0 120740129 99.554 150384507 32511 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:01:11] CVMFS is ok
[2025-10-11 00:01:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:01:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:01:11] Further information can be found at the LHC@home message board.
[2025-10-11 00:01:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:01:11] Checking for apptainer binary...
[2025-10-11 00:01:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:01:11] Running /usr/bin/apptainer --version
[2025-10-11 00:01:11] apptainer version 1.4.3-1.el9
[2025-10-11 00:01:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:01:13] c-211-26.aglt2.org
[2025-10-11 00:01:13] apptainer works
[2025-10-11 00:01:13] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:01:13] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:01:13] Starting ATLAS job with PandaID=6837786099
[2025-10-11 00:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 22:58:30]  *** The last 200 lines of the pilot log: ***
[2025-10-11 22:58:30] 2025-10-12 02:57:37,051 | INFO     | sum of square deviations: 751080176624.4685
[2025-10-11 22:58:30] 2025-10-12 02:57:37,164 | INFO     | sum of deviations: 2359732321881.344
[2025-10-11 22:58:30] 2025-10-12 02:57:37,165 | INFO     | mean x: 1760196535.8220403
[2025-10-11 22:58:30] 2025-10-12 02:57:37,165 | INFO     | mean y: 2527310.4951600893
[2025-10-11 22:58:30] 2025-10-12 02:57:37,165 | INFO     | -- intersect: -5527631503.055302
[2025-10-11 22:58:30] 2025-10-12 02:57:37,165 | INFO     | intersect: -5527631503.055302
[2025-10-11 22:58:30] 2025-10-12 02:57:37,168 | INFO     | chi2: 8.142143066699623
[2025-10-11 22:58:30] 2025-10-12 02:57:37,169 | INFO     | current chi2=8.142143066699623 (change=8.786734838335976 %)
[2025-10-11 22:58:30] 2025-10-12 02:57:37,169 | INFO     | right removable region: 1342
[2025-10-11 22:58:30] 2025-10-12 02:57:37,171 | INFO     | sum of square deviations: 751079584557.8225
[2025-10-11 22:58:30] 2025-10-12 02:57:37,273 | INFO     | sum of deviations: 1831043815174.6096
[2025-10-11 22:58:30] 2025-10-12 02:57:37,273 | INFO     | mean x: 1760196840.822785
[2025-10-11 22:58:30] 2025-10-12 02:57:37,273 | INFO     | mean y: 2533866.078183172
[2025-10-11 22:58:30] 2025-10-12 02:57:37,273 | INFO     | -- intersect: -4288619302.1654973
[2025-10-11 22:58:30] 2025-10-12 02:57:37,274 | INFO     | intersect: -4288619302.1654973
[2025-10-11 22:58:30] 2025-10-12 02:57:37,275 | INFO     | chi2: 5.136054548148358
[2025-10-11 22:58:30] 2025-10-12 02:57:37,276 | INFO     | current chi2=5.136054548148358 (change=42.462776501553016 %)
[2025-10-11 22:58:30] 2025-10-12 02:57:37,277 | INFO     | sum of square deviations: 742721221051.9249
[2025-10-11 22:58:30] 2025-10-12 02:57:37,452 | INFO     | sum of deviations: 1490577182472.986
[2025-10-11 22:58:30] 2025-10-12 02:57:37,452 | INFO     | mean x: 1760196993.3258595
[2025-10-11 22:58:30] 2025-10-12 02:57:37,452 | INFO     | mean y: 2540077.298206278
[2025-10-11 22:58:30] 2025-10-12 02:57:37,452 | INFO     | -- intersect: -3530022882.452816
[2025-10-11 22:58:30] 2025-10-12 02:57:37,453 | INFO     | intersect: -3530022882.452816
[2025-10-11 22:58:30] 2025-10-12 02:57:37,456 | INFO     | chi2: 3.0117417385373018
[2025-10-11 22:58:30] 2025-10-12 02:57:37,456 | INFO     | current chi2=3.0117417385373018 (change=41.360791434290945 %)
[2025-10-11 22:58:30] 2025-10-12 02:57:37,458 | INFO     | sum of square deviations: 734425336004.9696
[2025-10-11 22:58:30] 2025-10-12 02:57:37,580 | INFO     | sum of deviations: 1279362568650.7705
[2025-10-11 22:58:30] 2025-10-12 02:57:37,580 | INFO     | mean x: 1760197145.8267066
[2025-10-11 22:58:30] 2025-10-12 02:57:37,581 | INFO     | mean y: 2543958.3323330833
[2025-10-11 22:58:30] 2025-10-12 02:57:37,581 | INFO     | -- intersect: -3063704210.700567
[2025-10-11 22:58:30] 2025-10-12 02:57:37,585 | INFO     | intersect: -3063704210.700567
[2025-10-11 22:58:30] 2025-10-12 02:57:37,592 | INFO     | chi2: 2.2017910763936546
[2025-10-11 22:58:30] 2025-10-12 02:57:37,592 | INFO     | current chi2=2.2017910763936546 (change=26.893098162427837 %)
[2025-10-11 22:58:30] 2025-10-12 02:57:37,597 | INFO     | sum of square deviations: 726191533552.1667
[2025-10-11 22:58:30] 2025-10-12 02:57:37,680 | INFO     | sum of deviations: 1112906365483.4355
[2025-10-11 22:58:30] 2025-10-12 02:57:37,680 | INFO     | mean x: 1760197298.3268073
[2025-10-11 22:58:30] 2025-10-12 02:57:37,681 | INFO     | mean y: 2547041.3192771086
[2025-10-11 22:58:30] 2025-10-12 02:57:37,681 | INFO     | -- intersect: -2694998561.0544076
[2025-10-11 22:58:30] 2025-10-12 02:57:37,681 | INFO     | intersect: -2694998561.0544076
[2025-10-11 22:58:30] 2025-10-12 02:57:37,683 | INFO     | chi2: 1.734743436611907
[2025-10-11 22:58:30] 2025-10-12 02:57:37,683 | INFO     | current chi2=1.734743436611907 (change=21.2121688015346 %)
[2025-10-11 22:58:30] 2025-10-12 02:57:37,683 | INFO     | left removable region: 40
[2025-10-11 22:58:30] 2025-10-12 02:57:37,685 | INFO     | sum of square deviations: 684366952924.273
[2025-10-11 22:58:30] 2025-10-12 02:57:37,730 | INFO     | sum of deviations: 794353583842.7343
[2025-10-11 22:58:30] 2025-10-12 02:57:37,731 | INFO     | mean x: 1760197725.3264208
[2025-10-11 22:58:30] 2025-10-12 02:57:37,731 | INFO     | mean y: 2556298.8594470047
[2025-10-11 22:58:30] 2025-10-12 02:57:37,731 | INFO     | -- intersect: -2040527992.996457
[2025-10-11 22:58:30] 2025-10-12 02:57:37,731 | INFO     | intersect: -2040527992.996457
[2025-10-11 22:58:30] 2025-10-12 02:57:37,733 | INFO     | chi2: 0.2201753555359901
[2025-10-11 22:58:30] 2025-10-12 02:57:37,733 | INFO     | -- intersect: -2040527992.996457
[2025-10-11 22:58:30] 2025-10-12 02:57:37,733 | INFO     | current memory leak: 1.16 B/s (using 1302 data points, chi2=0.22)
[2025-10-11 22:58:30] 2025-10-12 02:57:37,735 | INFO     | could have reported an average CPU frequency of 2899 MHz (48 samples)
[2025-10-11 22:58:30] 2025-10-12 02:57:37,735 | INFO     | ..............................
[2025-10-11 22:58:30] 2025-10-12 02:57:37,735 | INFO     | . Timing measurements:
[2025-10-11 22:58:30] 2025-10-12 02:57:37,735 | INFO     | . get job = 1 s
[2025-10-11 22:58:30] 2025-10-12 02:57:37,735 | INFO     | . initial setup = 7 s
[2025-10-11 22:58:30] 2025-10-12 02:57:37,735 | INFO     | . payload setup = 64 s
[2025-10-11 22:58:30] 2025-10-12 02:57:37,736 | INFO     | . stage-in = 0 s
[2025-10-11 22:58:30] 2025-10-12 02:57:37,736 | INFO     | . payload execution = 82272 s
[2025-10-11 22:58:30] 2025-10-12 02:57:37,736 | INFO     | . stage-out = 6 s
[2025-10-11 22:58:30] 2025-10-12 02:57:37,736 | INFO     | . log creation = 1 s
[2025-10-11 22:58:30] 2025-10-12 02:57:37,736 | INFO     | ..............................
[2025-10-11 22:58:30] 2025-10-12 02:57:37,874 | INFO     | 
[2025-10-11 22:58:30] 2025-10-12 02:57:37,874 | INFO     | job summary report
[2025-10-11 22:58:30] 2025-10-12 02:57:37,874 | INFO     | --------------------------------------------------
[2025-10-11 22:58:30] 2025-10-12 02:57:37,874 | INFO     | PanDA job id: 6837786099
[2025-10-11 22:58:30] 2025-10-12 02:57:37,874 | INFO     | task id: 46676269
[2025-10-11 22:58:30] 2025-10-12 02:57:37,875 | INFO     | errors: (none)
[2025-10-11 22:58:30] 2025-10-12 02:57:37,875 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 22:58:30] 2025-10-12 02:57:37,875 | INFO     | pilot state: finished 
[2025-10-11 22:58:30] 2025-10-12 02:57:37,875 | INFO     | transexitcode: 0
[2025-10-11 22:58:30] 2025-10-12 02:57:37,875 | INFO     | exeerrorcode: 0
[2025-10-11 22:58:30] 2025-10-12 02:57:37,875 | INFO     | exeerrordiag: 
[2025-10-11 22:58:30] 2025-10-12 02:57:37,876 | INFO     | exitcode: 0
[2025-10-11 22:58:30] 2025-10-12 02:57:37,876 | INFO     | exitmsg: OK
[2025-10-11 22:58:30] 2025-10-12 02:57:37,876 | INFO     | cpuconsumptiontime: 84160 s
[2025-10-11 22:58:30] 2025-10-12 02:57:37,876 | INFO     | nevents: 400
[2025-10-11 22:58:30] 2025-10-12 02:57:37,876 | INFO     | neventsw: 0
[2025-10-11 22:58:30] 2025-10-12 02:57:37,876 | INFO     | pid: 1060508
[2025-10-11 22:58:30] 2025-10-12 02:57:37,876 | INFO     | pgrp: 1060508
[2025-10-11 22:58:30] 2025-10-12 02:57:37,876 | INFO     | corecount: 9
[2025-10-11 22:58:30] 2025-10-12 02:57:37,877 | INFO     | event service: False
[2025-10-11 22:58:30] 2025-10-12 02:57:37,877 | INFO     | sizes: {0: 2348028, 2: 2348629, 3: 2348741, 4: 2348940, 15: 2348940, 26: 2348968, 39: 2349124, 51: 2323469, 52: 2349442, 62: 2349470, 82338: 2409543, 82339: 240982
[2025-10-11 22:58:30] 2025-10-12 02:57:37,877 | INFO     | --------------------------------------------------
[2025-10-11 22:58:30] 2025-10-12 02:57:37,877 | INFO     | 
[2025-10-11 22:58:30] 2025-10-12 02:57:37,877 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 22:58:30] 2025-10-12 02:57:37,953 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,954 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,954 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,954 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,955 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,959 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,961 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 22:58:30] 2025-10-12 02:57:37,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,961 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 22:58:30] 2025-10-12 02:57:37,961 | INFO     | job 6837786099 has completed (purged errors)
[2025-10-11 22:58:30] 2025-10-12 02:57:37,962 | INFO     | overall cleanup function is called
[2025-10-11 22:58:30] 2025-10-12 02:57:38,986 | INFO     | --- collectZombieJob: --- 10, [1060508]
[2025-10-11 22:58:30] 2025-10-12 02:57:38,986 | INFO     | zombie collector waiting for pid 1060508
[2025-10-11 22:58:30] 2025-10-12 02:57:38,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 22:58:30] 2025-10-12 02:57:38,987 | INFO     | collected zombie processes
[2025-10-11 22:58:30] 2025-10-12 02:57:38,987 | INFO     | will attempt to kill all subprocesses of pid=1060508
[2025-10-11 22:58:30] 2025-10-12 02:57:40,026 | INFO     | process IDs to be killed: [1060508] (in reverse order)
[2025-10-11 22:58:30] 2025-10-12 02:57:40,342 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 22:58:30] 2025-10-12 02:57:40,342 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 22:58:30] 2025-10-12 02:57:40,383 | INFO     | did not find any defunct processes belonging to 1060508
[2025-10-11 22:58:30] 2025-10-12 02:57:40,419 | INFO     | did not find any defunct processes belonging to 1060508
[2025-10-11 22:58:30] 2025-10-12 02:57:40,419 | INFO     | ready for new job
[2025-10-11 22:58:30] 2025-10-12 02:57:40,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 22:58:30] 2025-10-12 02:57:40,434 | INFO     | ***************************************
[2025-10-11 22:58:30] 2025-10-12 02:57:40,435 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 22:58:30] 2025-10-12 02:57:40,435 | INFO     | ***************************************
[2025-10-11 22:58:30] 2025-10-12 02:57:40,435 | INFO     | 
[2025-10-11 22:58:30] 2025-10-12 02:57:40,437 | INFO     | architecture information:
[2025-10-11 22:58:30] 2025-10-12 02:57:40,441 | INFO     | executing command: cat /etc/os-release
[2025-10-11 22:58:30] 2025-10-12 02:57:40,602 | INFO     | cat /etc/os-release:
[2025-10-11 22:58:30] NAME="CentOS Linux"
[2025-10-11 22:58:30] VERSION="7 (Core)"
[2025-10-11 22:58:30] ID="centos"
[2025-10-11 22:58:30] ID_LIKE="rhel fedora"
[2025-10-11 22:58:30] VERSION_ID="7"
[2025-10-11 22:58:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 22:58:30] ANSI_COLOR="0;31"
[2025-10-11 22:58:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 22:58:30] HOME_URL="https://www.centos.org/"
[2025-10-11 22:58:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 22:58:30] 
[2025-10-11 22:58:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 22:58:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 22:58:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 22:58:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 22:58:30] 
[2025-10-11 22:58:30] 2025-10-12 02:57:40,603 | INFO     | ***************************************
[2025-10-11 22:58:30] 2025-10-12 02:57:41,114 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 22:58:30] 2025-10-12 02:57:41,222 | INFO     | sufficient remaining disk space (53350498304 B)
[2025-10-11 22:58:30] 2025-10-12 02:57:41,223 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 22:58:30] 2025-10-12 02:57:41,223 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 22:58:30] 2025-10-12 02:57:41,223 | INFO     | update_server=False
[2025-10-11 22:58:30] 2025-10-12 02:57:41,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 22:58:30] 2025-10-12 02:57:41,315 | INFO     | all payload control threads have been joined
[2025-10-11 22:58:30] 2025-10-12 02:57:41,404 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 22:58:30] 2025-10-12 02:57:41,531 | INFO     | all data control threads have been joined
[2025-10-11 22:58:30] 2025-10-12 02:57:41,680 | INFO     | all job control threads have been joined
[2025-10-11 22:58:30] 2025-10-12 02:57:41,700 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 22:58:30] 2025-10-12 02:57:41,700 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 22:58:30] 2025-10-12 02:57:41,700 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:58:30] 2025-10-12 02:57:41,701 | INFO     | will abort loop
[2025-10-11 22:58:30] 2025-10-12 02:57:42,229 | INFO     | [job] retrieve thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:42,321 | INFO     | [payload] control thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:42,380 | INFO     | [payload] failed_post thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:42,413 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:42,537 | INFO     | [data] control thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:42,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 22:58:30] 2025-10-12 02:57:42,687 | INFO     | [job] control thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:42,707 | INFO     | [job] job monitor thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:42,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 22:58:30] 2025-10-12 02:57:43,000 | INFO     | [payload] validate_post thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:43,031 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:43,430 | INFO     | [job] validate thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:43,439 | INFO     | [data] copytool_in thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:43,504 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:43,914 | INFO     | [job] queue monitor thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:44,555 | INFO     | [data] copytool_out thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:45,414 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:57:52,115 | INFO     | job.realtimelogging is not enabled
[2025-10-11 22:58:30] 2025-10-12 02:57:53,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 22:58:30] 2025-10-12 02:58:11,523 | INFO     | PID=1035304 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 22:58:30] 2025-10-12 02:58:11,561 | INFO     | .. there are 22 such processes running
[2025-10-11 22:58:30] 2025-10-12 02:58:11,561 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 22:58:30] 2025-10-12 02:58:11,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 22:58:30] 2025-10-12 02:58:11,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 22:58:30] 2025-10-12 02:58:21,504 | INFO     | [monitor] cgroup control has ended
[2025-10-11 22:58:30] 2025-10-12 02:58:23,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140226555283264)>', '<ExcThread(monitor, started 140226211063552)>']
[2025-10-11 22:58:30] 2025-10-12 02:58:23,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 22:58:30] 2025-10-12 02:58:23,668 | INFO     | [monitor] control thread has ended
[2025-10-11 22:58:30] 2025-10-12 02:58:28,415 | INFO     | all workflow threads have been joined
[2025-10-11 22:58:30] 2025-10-12 02:58:28,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 22:58:30] 2025-10-12 02:58:28,416 | INFO     | traces error code: 0
[2025-10-11 22:58:30] 2025-10-12 02:58:28,416 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 22:58:30] 2025-10-12 02:58:28,733 [wrapper] ==== pilot stdout END ====
[2025-10-11 22:58:30] 2025-10-12 02:58:28,757 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 22:58:30] 2025-10-12 02:58:28,784 [wrapper] pilotpid: 1035304
[2025-10-11 22:58:30] 2025-10-12 02:58:28,815 [wrapper] Pilot exit status: 0
[2025-10-11 22:58:30] 2025-10-12 02:58:28,933 [wrapper] pandaids: 6837786099
[2025-10-11 22:58:30] 2025-10-12 02:58:29,738 [wrapper] cleanup supervisor_pilot 1752218 1035305
[2025-10-11 22:58:30] 2025-10-12 02:58:29,751 [wrapper] Test setup, not cleaning
[2025-10-11 22:58:30] 2025-10-12 02:58:29,769 [wrapper] apfmon messages muted
[2025-10-11 22:58:30] 2025-10-12 02:58:29,798 [wrapper] ==== wrapper stdout END ====
[2025-10-11 22:58:30] 2025-10-12 02:58:29,814 [wrapper] ==== wrapper stderr END ====
[2025-10-11 22:58:30]  *** Error codes and diagnostics ***
[2025-10-11 22:58:30]     "exeErrorCode": 0,
[2025-10-11 22:58:30]     "exeErrorDiag": "",
[2025-10-11 22:58:30]     "pilotErrorCode": 0,
[2025-10-11 22:58:30]     "pilotErrorDiag": "",
[2025-10-11 22:58:30]  *** Listing of results directory ***
[2025-10-11 22:58:30] total 439356
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 17:34 queuedata.json
[2025-10-11 22:58:30] -rwx------. 1 boincer umatlas     36292 Oct 10 17:35 runpilot2-wrapper.sh
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 17:35 pilot3.tar.gz
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 22:58:30] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:01 run_atlas
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:01 job.xml
[2025-10-11 22:58:30] -rw-r--r--. 2 boincer umatlas 222840620 Oct 11 00:01 EVNT.46676267._001843.pool.root.1
[2025-10-11 22:58:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:01 start_atlas.sh
[2025-10-11 22:58:30] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:01 shared
[2025-10-11 22:58:30] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 00:01 input.tar.gz
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:01 boinc_lockfile
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 00:01 pandaJob.out
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas    975509 Oct 11 00:02 agis_schedconf.cvmfs.json
[2025-10-11 22:58:30] drwx------. 5 boincer umatlas      4096 Oct 11 00:02 pilot3
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas 201752666 Oct 11 22:55 HITS.46676269._045587.pool.root.1
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas       531 Oct 11 22:55 boinc_task_state.xml
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas      1047 Oct 11 22:56 memory_monitor_summary.json
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas   1560580 Oct 11 22:56 agis_ddmendpoints.agis.ALL.json
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas   1305967 Oct 11 22:56 log.46676269._045587.job.log.tgz.1
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas        95 Oct 11 22:57 pilot_heartbeat.json
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas      7827 Oct 11 22:57 heartbeat.json
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas      6523 Oct 11 22:58 init_data.xml
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 22:58 boinc_mmap_file
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas        28 Oct 11 22:58 wrapper_checkpoint.txt
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas      5082 Oct 11 22:58 pilotlog.txt
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas   9392025 Oct 11 22:58 log.46676269._045587.job.log.1
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas       357 Oct 11 22:58 output.list
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas       620 Oct 11 22:58 runtime_log
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas  10721280 Oct 11 22:58 result.tar.gz
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas      8704 Oct 11 22:58 runtime_log.err
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas       658 Oct 11 22:58 25HKDmgwZR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3VeNDmkrJlXo.diag
[2025-10-11 22:58:30] -rw-r--r--. 1 boincer umatlas     21088 Oct 11 22:58 stderr.txt
[2025-10-11 22:58:30] HITS file was successfully produced:
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas 201752666 Oct 11 22:55 shared/HITS.pool.root.1
[2025-10-11 22:58:30]  *** Contents of shared directory: ***
[2025-10-11 22:58:30] total 425704
[2025-10-11 22:58:30] -rw-r--r--. 2 boincer umatlas 222840620 Oct 11 00:01 ATLAS.root_0
[2025-10-11 22:58:30] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:01 start_atlas.sh
[2025-10-11 22:58:30] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 00:01 input.tar.gz
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas 201752666 Oct 11 22:55 HITS.pool.root.1
[2025-10-11 22:58:30] -rw-------. 1 boincer umatlas  10721280 Oct 11 22:58 result.tar.gz
22:58:31 (1024248): run_atlas exited; CPU time 88120.747577
22:58:31 (1024248): called boinc_finish(0)

</stderr_txt>
]]>

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