Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:05 (927309): wrapper (7.7.26015): starting
00:04:05 (927309): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 00:04:05] Arguments: --nthreads 12
[2025-10-11 00:04:05] Threads: 12
[2025-10-11 00:04:05] Checking for CVMFS
[2025-10-11 00:04:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:04:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:04:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:04:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:04:10] 2.13.2.0 7655 55344 386924 151571 2 445 32667322 32935936 34702 16776704 10 86548597 99.525 110356661 8831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:04:10] CVMFS is ok
[2025-10-11 00:04:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:04:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:04:10] Further information can be found at the LHC@home message board.
[2025-10-11 00:04:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:04:10] Checking for apptainer binary...
[2025-10-11 00:04:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:04:10] Running /usr/bin/apptainer --version
[2025-10-11 00:04:11] apptainer version 1.4.3-1.el9
[2025-10-11 00:04:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:04:13] c6-12-25-4.aglt2.org
[2025-10-11 00:04:13] apptainer works
[2025-10-11 00:04:13] Set ATHENA_PROC_NUMBER=12
[2025-10-11 00:04:13] Set ATHENA_CORE_NUMBER=12
[2025-10-11 00:04:13] Starting ATLAS job with PandaID=6837828540
[2025-10-11 00:04:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:51:22]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:51:22] 2025-10-11 15:50:09,017 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 999.999375
[2025-10-11 11:51:22] 2025-10-11 15:50:09,174 | INFO     | monitor loop #1190: job 0:6837828540 is in state 'finished'
[2025-10-11 11:51:22] 2025-10-11 15:50:09,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 11:51:22] 2025-10-11 15:50:09,354 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6837828540/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 11:51:22] 2025-10-11 15:50:09,356 | INFO     | extracted standard info from prmon json
[2025-10-11 11:51:22] 2025-10-11 15:50:09,357 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 11:51:22] 2025-10-11 15:50:09,357 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 11:51:22] 2025-10-11 15:50:09,382 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:51:22] 2025-10-11 15:50:09,383 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:51:22] 2025-10-11 15:50:09,611 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:51:22] 2025-10-11 15:50:09,615 | INFO     | sum of square deviations: 100115622555.09583
[2025-10-11 11:51:22] 2025-10-11 15:50:09,697 | INFO     | time since job start (42204s) is within the limit (172800.0s)
[2025-10-11 11:51:22] 2025-10-11 15:50:09,854 | INFO     | sum of deviations: 901704784182.9514
[2025-10-11 11:51:22] 2025-10-11 15:50:09,855 | INFO     | mean x: 1760176794.084548
[2025-10-11 11:51:22] 2025-10-11 15:50:09,855 | INFO     | mean y: 2447494.7594752186
[2025-10-11 11:51:22] 2025-10-11 15:50:09,855 | INFO     | -- intersect: -15850820913.579071
[2025-10-11 11:51:22] 2025-10-11 15:50:09,856 | INFO     | intersect: -15850820913.579071
[2025-10-11 11:51:22] 2025-10-11 15:50:09,887 | INFO     | chi2: 17.353300012820593
[2025-10-11 11:51:22] 2025-10-11 15:50:09,922 | INFO     | sum of square deviations: 97943346224.31705
[2025-10-11 11:51:22] 2025-10-11 15:50:10,147 | INFO     | sum of deviations: 1116826052519.1267
[2025-10-11 11:51:22] 2025-10-11 15:50:10,173 | INFO     | mean x: 1760176641.6079295
[2025-10-11 11:51:22] 2025-10-11 15:50:10,174 | INFO     | mean y: 2462594.8281938327
[2025-10-11 11:51:22] 2025-10-11 15:50:10,174 | INFO     | -- intersect: -20068437636.425007
[2025-10-11 11:51:22] 2025-10-11 15:50:10,175 | INFO     | intersect: -20068437636.425007
[2025-10-11 11:51:22] 2025-10-11 15:50:10,202 | INFO     | chi2: 13.667658150920527
[2025-10-11 11:51:22] 2025-10-11 15:50:10,203 | INFO     | current chi2=13.667658150920527 (change=21.238852893554075 %)
[2025-10-11 11:51:22] 2025-10-11 15:50:10,203 | INFO     | right removable region: 680
[2025-10-11 11:51:22] 2025-10-11 15:50:10,237 | INFO     | sum of square deviations: 97942013010.31711
[2025-10-11 11:51:22] 2025-10-11 15:50:10,460 | INFO     | sum of deviations: 667000850443.2561
[2025-10-11 11:51:22] 2025-10-11 15:50:10,460 | INFO     | mean x: 1760176946.6079295
[2025-10-11 11:51:22] 2025-10-11 15:50:10,461 | INFO     | mean y: 2463959.323054332
[2025-10-11 11:51:22] 2025-10-11 15:50:10,461 | INFO     | -- intersect: -11984623953.54668
[2025-10-11 11:51:22] 2025-10-11 15:50:10,461 | INFO     | intersect: -11984623953.54668
[2025-10-11 11:51:22] 2025-10-11 15:50:10,502 | INFO     | chi2: 12.959504493313762
[2025-10-11 11:51:22] 2025-10-11 15:50:10,503 | INFO     | current chi2=12.959504493313762 (change=25.319653992385895 %)
[2025-10-11 11:51:22] 2025-10-11 15:50:10,527 | INFO     | sum of square deviations: 95800161931.8033
[2025-10-11 11:51:22] 2025-10-11 15:50:10,699 | INFO     | sum of deviations: 481251786792.5496
[2025-10-11 11:51:22] 2025-10-11 15:50:10,700 | INFO     | mean x: 1760177099.128698
[2025-10-11 11:51:22] 2025-10-11 15:50:10,700 | INFO     | mean y: 2477183.579881657
[2025-10-11 11:51:22] 2025-10-11 15:50:10,700 | INFO     | -- intersect: -8839766471.812105
[2025-10-11 11:51:22] 2025-10-11 15:50:10,700 | INFO     | intersect: -8839766471.812105
[2025-10-11 11:51:22] 2025-10-11 15:50:10,720 | INFO     | chi2: 10.351524653169689
[2025-10-11 11:51:22] 2025-10-11 15:50:10,721 | INFO     | current chi2=10.351524653169689 (change=20.124070650151918 %)
[2025-10-11 11:51:22] 2025-10-11 15:50:10,721 | INFO     | left removable region: 20
[2025-10-11 11:51:22] 2025-10-11 15:50:10,735 | INFO     | sum of square deviations: 89157733770.56224
[2025-10-11 11:51:22] 2025-10-11 15:50:10,873 | INFO     | sum of deviations: 491519954033.15283
[2025-10-11 11:51:22] 2025-10-11 15:50:10,874 | INFO     | mean x: 1760177221.2075758
[2025-10-11 11:51:22] 2025-10-11 15:50:10,874 | INFO     | mean y: 2514203.889393939
[2025-10-11 11:51:22] 2025-10-11 15:50:10,874 | INFO     | -- intersect: -9701211880.990147
[2025-10-11 11:51:22] 2025-10-11 15:50:10,875 | INFO     | intersect: -9701211880.990147
[2025-10-11 11:51:22] 2025-10-11 15:50:10,883 | INFO     | chi2: 3.482607057759581
[2025-10-11 11:51:22] 2025-10-11 15:50:10,884 | INFO     | -- intersect: -9701211880.990147
[2025-10-11 11:51:22] 2025-10-11 15:50:10,884 | INFO     | current memory leak: 5.51 B/s (using 660 data points, chi2=3.48)
[2025-10-11 11:51:22] 2025-10-11 15:50:10,886 | INFO     | could have reported an average CPU frequency of 999 MHz (26 samples)
[2025-10-11 11:51:22] 2025-10-11 15:50:10,925 | INFO     | ..............................
[2025-10-11 11:51:22] 2025-10-11 15:50:10,925 | INFO     | . Timing measurements:
[2025-10-11 11:51:22] 2025-10-11 15:50:10,926 | INFO     | . get job = 0 s
[2025-10-11 11:51:22] 2025-10-11 15:50:10,926 | INFO     | . initial setup = 16 s
[2025-10-11 11:51:22] 2025-10-11 15:50:10,926 | INFO     | . payload setup = 88 s
[2025-10-11 11:51:22] 2025-10-11 15:50:10,926 | INFO     | . stage-in = 2 s
[2025-10-11 11:51:22] 2025-10-11 15:50:10,926 | INFO     | . payload execution = 41873 s
[2025-10-11 11:51:22] 2025-10-11 15:50:10,927 | INFO     | . stage-out = 24 s
[2025-10-11 11:51:22] 2025-10-11 15:50:10,927 | INFO     | . log creation = 3 s
[2025-10-11 11:51:22] 2025-10-11 15:50:10,927 | INFO     | ..............................
[2025-10-11 11:51:22] 2025-10-11 15:50:11,745 | INFO     | time since job start (42206s) is within the limit (172800.0s)
[2025-10-11 11:51:22] 2025-10-11 15:50:12,147 | INFO     | 
[2025-10-11 11:51:22] 2025-10-11 15:50:12,147 | INFO     | job summary report
[2025-10-11 11:51:22] 2025-10-11 15:50:12,147 | INFO     | --------------------------------------------------
[2025-10-11 11:51:22] 2025-10-11 15:50:12,148 | INFO     | PanDA job id: 6837828540
[2025-10-11 11:51:22] 2025-10-11 15:50:12,148 | INFO     | task id: 46676269
[2025-10-11 11:51:22] 2025-10-11 15:50:12,148 | INFO     | errors: (none)
[2025-10-11 11:51:22] 2025-10-11 15:50:12,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:51:22] 2025-10-11 15:50:12,148 | INFO     | pilot state: finished 
[2025-10-11 11:51:22] 2025-10-11 15:50:12,149 | INFO     | transexitcode: 0
[2025-10-11 11:51:22] 2025-10-11 15:50:12,149 | INFO     | exeerrorcode: 0
[2025-10-11 11:51:22] 2025-10-11 15:50:12,149 | INFO     | exeerrordiag: 
[2025-10-11 11:51:22] 2025-10-11 15:50:12,149 | INFO     | exitcode: 0
[2025-10-11 11:51:22] 2025-10-11 15:50:12,149 | INFO     | exitmsg: OK
[2025-10-11 11:51:22] 2025-10-11 15:50:12,150 | INFO     | cpuconsumptiontime: 121204 s
[2025-10-11 11:51:22] 2025-10-11 15:50:12,150 | INFO     | nevents: 400
[2025-10-11 11:51:22] 2025-10-11 15:50:12,150 | INFO     | neventsw: 0
[2025-10-11 11:51:22] 2025-10-11 15:50:12,150 | INFO     | pid: 969968
[2025-10-11 11:51:22] 2025-10-11 15:50:12,161 | INFO     | pgrp: 969968
[2025-10-11 11:51:22] 2025-10-11 15:50:12,161 | INFO     | corecount: 12
[2025-10-11 11:51:22] 2025-10-11 15:50:12,161 | INFO     | event service: False
[2025-10-11 11:51:22] 2025-10-11 15:50:12,161 | INFO     | sizes: {0: 2348029, 2: 2348630, 3: 2348714, 4: 2348770, 5: 2348770, 6: 2348969, 7: 2349125, 20: 2349153, 32: 2349181, 44: 2349209, 60: 2349237, 67: 2349807, 73: 23
[2025-10-11 11:51:22] 2025-10-11 15:50:12,162 | INFO     | --------------------------------------------------
[2025-10-11 11:51:22] 2025-10-11 15:50:12,162 | INFO     | 
[2025-10-11 11:51:22] 2025-10-11 15:50:12,162 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 11:51:22] 2025-10-11 15:50:12,437 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,438 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,438 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,439 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,445 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,445 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,445 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,445 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,446 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:51:22] 2025-10-11 15:50:12,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:51:22] 2025-10-11 15:50:12,447 | INFO     | job 6837828540 has completed (purged errors)
[2025-10-11 11:51:22] 2025-10-11 15:50:12,452 | INFO     | overall cleanup function is called
[2025-10-11 11:51:22] 2025-10-11 15:50:13,475 | INFO     | --- collectZombieJob: --- 10, [969968]
[2025-10-11 11:51:22] 2025-10-11 15:50:13,476 | INFO     | zombie collector waiting for pid 969968
[2025-10-11 11:51:22] 2025-10-11 15:50:13,476 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:51:22] 2025-10-11 15:50:13,477 | INFO     | collected zombie processes
[2025-10-11 11:51:22] 2025-10-11 15:50:13,477 | INFO     | will attempt to kill all subprocesses of pid=969968
[2025-10-11 11:51:22] 2025-10-11 15:50:22,300 | INFO     | process IDs to be killed: [969968] (in reverse order)
[2025-10-11 11:51:22] 2025-10-11 15:50:22,862 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:51:22] 2025-10-11 15:50:22,869 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:51:22] 2025-10-11 15:50:22,997 | INFO     | did not find any defunct processes belonging to 969968
[2025-10-11 11:51:22] 2025-10-11 15:50:23,071 | INFO     | did not find any defunct processes belonging to 969968
[2025-10-11 11:51:22] 2025-10-11 15:50:23,072 | INFO     | ready for new job
[2025-10-11 11:51:22] 2025-10-11 15:50:23,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:51:22] 2025-10-11 15:50:23,090 | INFO     | ***************************************
[2025-10-11 11:51:22] 2025-10-11 15:50:23,090 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:51:22] 2025-10-11 15:50:23,090 | INFO     | ***************************************
[2025-10-11 11:51:22] 2025-10-11 15:50:23,091 | INFO     | 
[2025-10-11 11:51:22] 2025-10-11 15:50:23,131 | INFO     | architecture information:
[2025-10-11 11:51:22] 2025-10-11 15:50:23,177 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:51:22] 2025-10-11 15:50:23,348 | INFO     | cat /etc/os-release:
[2025-10-11 11:51:22] NAME="CentOS Linux"
[2025-10-11 11:51:22] VERSION="7 (Core)"
[2025-10-11 11:51:22] ID="centos"
[2025-10-11 11:51:22] ID_LIKE="rhel fedora"
[2025-10-11 11:51:22] VERSION_ID="7"
[2025-10-11 11:51:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:51:22] ANSI_COLOR="0;31"
[2025-10-11 11:51:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:51:22] HOME_URL="https://www.centos.org/"
[2025-10-11 11:51:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:51:22] 
[2025-10-11 11:51:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:51:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:51:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:51:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:51:22] 
[2025-10-11 11:51:22] 2025-10-11 15:50:23,348 | INFO     | ***************************************
[2025-10-11 11:51:22] 2025-10-11 15:50:23,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 11:51:22] 2025-10-11 15:50:24,040 | INFO     | sufficient remaining disk space (92901736448 B)
[2025-10-11 11:51:22] 2025-10-11 15:50:24,041 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:51:22] 2025-10-11 15:50:24,042 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:51:22] 2025-10-11 15:50:24,042 | INFO     | update_server=False
[2025-10-11 11:51:22] 2025-10-11 15:50:24,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:51:22] 2025-10-11 15:50:24,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:51:22] 2025-10-11 15:50:24,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:51:22] 2025-10-11 15:50:24,045 | INFO     | aborting loop
[2025-10-11 11:51:22] 2025-10-11 15:50:24,343 | INFO     | all data control threads have been joined
[2025-10-11 11:51:22] 2025-10-11 15:50:24,354 | INFO     | all payload control threads have been joined
[2025-10-11 11:51:22] 2025-10-11 15:50:24,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:51:22] 2025-10-11 15:50:25,052 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:25,055 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:25,243 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:51:22] 2025-10-11 15:50:25,345 | INFO     | [job] validate thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:25,361 | INFO     | [payload] control thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:25,364 | INFO     | [data] control thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:25,501 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:25,549 | INFO     | all job control threads have been joined
[2025-10-11 11:51:22] 2025-10-11 15:50:26,115 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:26,137 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:26,145 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:26,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:26,250 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:26,347 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:26,352 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:26,556 | INFO     | [job] control thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:27,000 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:28,078 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:51:22] 2025-10-11 15:50:52,433 | INFO     | PID=939482 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 11:51:22] 2025-10-11 15:50:52,452 | INFO     | .. there are 39 such processes running
[2025-10-11 11:51:22] 2025-10-11 15:50:52,453 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:51:22] 2025-10-11 15:50:52,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:51:22] 2025-10-11 15:50:52,454 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:51:22] 2025-10-11 15:51:13,434 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:51:22] 2025-10-11 15:51:13,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139902726489920)>', '<ExcThread(monitor, started 139902066857728)>']
[2025-10-11 11:51:22] 2025-10-11 15:51:14,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:51:22] 2025-10-11 15:51:14,705 | INFO     | [monitor] control thread has ended
[2025-10-11 11:51:22] 2025-10-11 15:51:18,945 | INFO     | all workflow threads have been joined
[2025-10-11 11:51:22] 2025-10-11 15:51:18,945 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:51:22] 2025-10-11 15:51:18,946 | INFO     | traces error code: 0
[2025-10-11 11:51:22] 2025-10-11 15:51:18,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:51:22] 2025-10-11 15:51:21,528 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:51:22] 2025-10-11 15:51:21,555 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:51:22] 2025-10-11 15:51:21,561 [wrapper] pilotpid: 939482
[2025-10-11 11:51:22] 2025-10-11 15:51:21,567 [wrapper] Pilot exit status: 0
[2025-10-11 11:51:22] 2025-10-11 15:51:21,706 [wrapper] pandaids: 6837828540
[2025-10-11 11:51:22] 2025-10-11 15:51:21,940 [wrapper] cleanup supervisor_pilot 2664812 939483
[2025-10-11 11:51:22] 2025-10-11 15:51:21,947 [wrapper] Test setup, not cleaning
[2025-10-11 11:51:22] 2025-10-11 15:51:21,952 [wrapper] apfmon messages muted
[2025-10-11 11:51:22] 2025-10-11 15:51:21,958 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:51:22] 2025-10-11 15:51:21,963 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:51:22]  *** Error codes and diagnostics ***
[2025-10-11 11:51:22]     "exeErrorCode": 0,
[2025-10-11 11:51:22]     "exeErrorDiag": "",
[2025-10-11 11:51:22]     "pilotErrorCode": 0,
[2025-10-11 11:51:22]     "pilotErrorDiag": "",
[2025-10-11 11:51:22]  *** Listing of results directory ***
[2025-10-11 11:51:22] total 414508
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 17:48 queuedata.json
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 17:48 pilot3.tar.gz
[2025-10-11 11:51:22] -rwx------. 1 boincer umatlas     36292 Oct 10 17:56 runpilot2-wrapper.sh
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:51:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:04 run_atlas
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:04 job.xml
[2025-10-11 11:51:22] -rw-r--r--. 2 boincer umatlas 223337170 Oct 11 00:04 EVNT.46676267._001859.pool.root.1
[2025-10-11 11:51:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:04 start_atlas.sh
[2025-10-11 11:51:22] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:04 shared
[2025-10-11 11:51:22] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 00:04 input.tar.gz
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:04 boinc_lockfile
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:04 pandaJob.out
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas    975509 Oct 11 00:06 agis_schedconf.cvmfs.json
[2025-10-11 11:51:22] drwx------. 5 boincer umatlas      4096 Oct 11 00:06 pilot3
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas 189444123 Oct 11 11:40 HITS.46676269._046001.pool.root.1
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas       532 Oct 11 11:40 boinc_task_state.xml
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas      6859 Oct 11 11:47 init_data.xml
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas      1044 Oct 11 11:48 memory_monitor_summary.json
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas   1560580 Oct 11 11:48 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas    731297 Oct 11 11:48 log.46676269._046001.job.log.tgz.1
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas        96 Oct 11 11:49 pilot_heartbeat.json
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas      7842 Oct 11 11:50 heartbeat.json
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas      4823 Oct 11 11:51 pilotlog.txt
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 11:51 boinc_mmap_file
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas        29 Oct 11 11:51 wrapper_checkpoint.txt
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas   3152989 Oct 11 11:51 log.46676269._046001.job.log.1
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas       357 Oct 11 11:51 output.list
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas       620 Oct 11 11:51 runtime_log
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas   3901440 Oct 11 11:51 result.tar.gz
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas      8716 Oct 11 11:51 runtime_log.err
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas       663 Oct 11 11:51 kuNNDmjHaR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4YeNDmjdZOUn.diag
[2025-10-11 11:51:22] -rw-r--r--. 1 boincer umatlas     21269 Oct 11 11:51 stderr.txt
[2025-10-11 11:51:22] HITS file was successfully produced:
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas 189444123 Oct 11 11:40 shared/HITS.pool.root.1
[2025-10-11 11:51:22]  *** Contents of shared directory: ***
[2025-10-11 11:51:22] total 407508
[2025-10-11 11:51:22] -rw-r--r--. 2 boincer umatlas 223337170 Oct 11 00:04 ATLAS.root_0
[2025-10-11 11:51:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:04 start_atlas.sh
[2025-10-11 11:51:22] -rw-r--r--. 2 boincer umatlas    569683 Oct 11 00:04 input.tar.gz
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas 189444123 Oct 11 11:40 HITS.pool.root.1
[2025-10-11 11:51:22] -rw-------. 1 boincer umatlas   3901440 Oct 11 11:51 result.tar.gz
11:51:23 (927309): run_atlas exited; CPU time 123885.836905
11:51:23 (927309): called boinc_finish(0)

</stderr_txt>
]]>

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