Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:38:43 (1922025): wrapper (7.7.26015): starting
14:38:43 (1922025): wrapper: running run_atlas (--nthreads 2)
[2025-10-11 14:38:43] Arguments: --nthreads 2
[2025-10-11 14:38:43] Threads: 2
[2025-10-11 14:38:43] Checking for CVMFS
[2025-10-11 14:38:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:38:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:38:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:38:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:38:44] 2.9.2.0 1264658 2863 59972 151584 0 57 27124181 36864000 0 130560 0 1732548 99.988 98449 932 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 14:38:44] CVMFS is ok
[2025-10-11 14:38:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:38:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:38:44] Further information can be found at the LHC@home message board.
[2025-10-11 14:38:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:38:44] Checking for apptainer binary...
[2025-10-11 14:38:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:38:44] Running /usr/bin/apptainer --version
[2025-10-11 14:38:44] apptainer version 1.4.1-1.1
[2025-10-11 14:38:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:38:44] magicA252b
[2025-10-11 14:38:44] apptainer works
[2025-10-11 14:38:44] Set ATHENA_PROC_NUMBER=2
[2025-10-11 14:38:44] Set ATHENA_CORE_NUMBER=2
[2025-10-11 14:38:44] Starting ATLAS job with PandaID=6837786051
[2025-10-11 14:38:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 16:40:13]  *** The last 200 lines of the pilot log: ***
[2025-10-11 16:40:13] 2025-10-11 14:39:34,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 16:40:13] 2025-10-11 14:39:34,075 | INFO     | did not find any defunct processes belonging to 1932141
[2025-10-11 16:40:13] 2025-10-11 14:39:34,076 | INFO     | did not find any defunct processes belonging to 1932141
[2025-10-11 16:40:13] 2025-10-11 14:39:34,076 | INFO     | ready for new job
[2025-10-11 16:40:13] 2025-10-11 14:39:34,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 16:40:13] 2025-10-11 14:39:34,076 | INFO     | ***************************************
[2025-10-11 16:40:13] 2025-10-11 14:39:34,076 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 16:40:13] 2025-10-11 14:39:34,076 | INFO     | ***************************************
[2025-10-11 16:40:13] 2025-10-11 14:39:34,076 | INFO     | 
[2025-10-11 16:40:13] 2025-10-11 14:39:34,076 | INFO     | architecture information:
[2025-10-11 16:40:13] 2025-10-11 14:39:34,077 | INFO     | executing command: cat /etc/os-release
[2025-10-11 16:40:13] 2025-10-11 14:39:34,085 | INFO     | cat /etc/os-release:
[2025-10-11 16:40:13] NAME="CentOS Linux"
[2025-10-11 16:40:13] VERSION="7 (Core)"
[2025-10-11 16:40:13] ID="centos"
[2025-10-11 16:40:13] ID_LIKE="rhel fedora"
[2025-10-11 16:40:13] VERSION_ID="7"
[2025-10-11 16:40:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 16:40:13] ANSI_COLOR="0;31"
[2025-10-11 16:40:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 16:40:13] HOME_URL="https://www.centos.org/"
[2025-10-11 16:40:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 16:40:13] 
[2025-10-11 16:40:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 16:40:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 16:40:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 16:40:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 16:40:13] 
[2025-10-11 16:40:13] 2025-10-11 14:39:34,085 | INFO     | ***************************************
[2025-10-11 16:40:13] 2025-10-11 14:39:34,588 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | INFO     | sufficient remaining disk space (333410467840 B)
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | INFO     | update_server=False
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | INFO     | aborting loop
[2025-10-11 16:40:13] 2025-10-11 14:39:34,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 16:40:13] 2025-10-11 14:39:34,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 16:40:13] 2025-10-11 14:39:35,151 | INFO     | all payload control threads have been joined
[2025-10-11 16:40:13] 2025-10-11 14:39:35,268 | INFO     | all data control threads have been joined
[2025-10-11 16:40:13] 2025-10-11 14:39:35,605 | INFO     | [job] retrieve thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:35,606 | INFO     | [job] queue monitor thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:35,607 | INFO     | [job] job monitor thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:35,608 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:35,759 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:35,832 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:36,027 | INFO     | [data] copytool_in thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:36,157 | INFO     | [payload] control thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:36,191 | INFO     | all job control threads have been joined
[2025-10-11 16:40:13] 2025-10-11 14:39:36,274 | INFO     | [data] control thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:36,543 | INFO     | [payload] validate_post thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:36,606 | INFO     | [data] copytool_out thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:36,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 16:40:13] 2025-10-11 14:39:36,917 | INFO     | [job] validate thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:37,010 | INFO     | [payload] failed_post thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:37,197 | INFO     | [job] control thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:40,638 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:39:45,572 | INFO     | job.realtimelogging is not enabled
[2025-10-11 16:40:13] 2025-10-11 14:39:46,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 16:40:13] 2025-10-11 14:40:06,212 | INFO     | [monitor] cgroup control has ended
[2025-10-11 16:40:13] 2025-10-11 14:40:08,289 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126948181824)>', '<ExcThread(monitor, started 140126294357760)>']
[2025-10-11 16:40:13] 2025-10-11 14:40:08,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 16:40:13] 2025-10-11 14:40:08,769 | INFO     | [monitor] control thread has ended
[2025-10-11 16:40:13] 2025-10-11 14:40:13,315 | INFO     | all workflow threads have been joined
[2025-10-11 16:40:13] 2025-10-11 14:40:13,316 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 16:40:13] 2025-10-11 14:40:13,316 | INFO     | traces error code: 0
[2025-10-11 16:40:13] 2025-10-11 14:40:13,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 16:40:13] 2025-10-11 14:40:13,392 [wrapper] ==== pilot stdout END ====
[2025-10-11 16:40:13] 2025-10-11 14:40:13,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 16:40:13] 2025-10-11 14:40:13,396 [wrapper] pilotpid: 1925729
[2025-10-11 16:40:13] 2025-10-11 14:40:13,399 [wrapper] Pilot exit status: 0
[2025-10-11 16:40:13] 2025-10-11 14:40:13,404 [wrapper] pandaids: 6837786051
[2025-10-11 16:40:13] 2025-10-11 14:40:13,416 [wrapper] cleanup supervisor_pilot 1946533 1925730
[2025-10-11 16:40:13] 2025-10-11 14:40:13,418 [wrapper] Test setup, not cleaning
[2025-10-11 16:40:13] 2025-10-11 14:40:13,421 [wrapper] apfmon messages muted
[2025-10-11 16:40:13] 2025-10-11 14:40:13,423 [wrapper] ==== wrapper stdout END ====
[2025-10-11 16:40:13] 2025-10-11 14:40:13,425 [wrapper] ==== wrapper stderr END ====
[2025-10-11 16:40:13]  *** Error codes and diagnostics ***
[2025-10-11 16:40:13]     "exeErrorCode": 0,
[2025-10-11 16:40:13]     "exeErrorDiag": "",
[2025-10-11 16:40:13]     "pilotErrorCode": 0,
[2025-10-11 16:40:13]     "pilotErrorDiag": "",
[2025-10-11 16:40:13]  *** Listing of results directory ***
[2025-10-11 16:40:13] total 406368
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc    557409 Oct 10 23:22 pilot3.tar.gz
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc      5112 Oct 10 23:34 queuedata.json
[2025-10-11 16:40:13] -rwx------ 1 boinc boinc     36292 Oct 10 23:34 runpilot2-wrapper.sh
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc       100 Oct 11 14:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 16:40:13] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 14:38 run_atlas
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc       105 Oct 11 14:38 job.xml
[2025-10-11 16:40:13] -rw-r--r-- 2 boinc boinc 219591239 Oct 11 14:38 EVNT.46676267._001841.pool.root.1
[2025-10-11 16:40:13] -rw-r--r-- 2 boinc boinc    569683 Oct 11 14:38 input.tar.gz
[2025-10-11 16:40:13] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:38 start_atlas.sh
[2025-10-11 16:40:13] drwxrwx--x 2 boinc boinc      4096 Oct 11 14:38 shared
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:38 boinc_setup_complete
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc      6209 Oct 11 14:38 init_data.xml
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:38 boinc_lockfile
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc      2550 Oct 11 14:38 pandaJob.out
[2025-10-11 16:40:13] -rw------- 1 boinc boinc    975504 Oct 11 14:38 agis_schedconf.cvmfs.json
[2025-10-11 16:40:13] -rw------- 1 boinc boinc   1560580 Oct 11 14:38 agis_ddmendpoints.agis.ALL.json
[2025-10-11 16:40:13] drwx------ 5 boinc boinc      4096 Oct 11 14:38 pilot3
[2025-10-11 16:40:13] -rw------- 1 boinc boinc 189980704 Oct 11 16:39 HITS.46676269._045539.pool.root.1
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc       529 Oct 11 16:39 boinc_task_state.xml
[2025-10-11 16:40:13] -rw------- 1 boinc boinc      1020 Oct 11 16:39 memory_monitor_summary.json
[2025-10-11 16:40:13] -rw------- 1 boinc boinc    286679 Oct 11 16:39 log.46676269._045539.job.log.tgz.1
[2025-10-11 16:40:13] -rw------- 1 boinc boinc        95 Oct 11 16:39 pilot_heartbeat.json
[2025-10-11 16:40:13] -rw------- 1 boinc boinc      7762 Oct 11 16:39 heartbeat.json
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc        27 Oct 11 16:39 wrapper_checkpoint.txt
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc      8192 Oct 11 16:39 boinc_mmap_file
[2025-10-11 16:40:13] -rw------- 1 boinc boinc      4628 Oct 11 16:40 pilotlog.txt
[2025-10-11 16:40:13] -rw------- 1 boinc boinc   1040589 Oct 11 16:40 log.46676269._045539.job.log.1
[2025-10-11 16:40:13] -rw------- 1 boinc boinc       357 Oct 11 16:40 output.list
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc       620 Oct 11 16:40 runtime_log
[2025-10-11 16:40:13] -rw------- 1 boinc boinc   1341440 Oct 11 16:40 result.tar.gz
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc      8797 Oct 11 16:40 runtime_log.err
[2025-10-11 16:40:13] -rw------- 1 boinc boinc       663 Oct 11 16:40 ElqKDmvvZR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfVeNDmS5Qykm.diag
[2025-10-11 16:40:13] -rw-r--r-- 1 boinc boinc      9880 Oct 11 16:40 stderr.txt
[2025-10-11 16:40:13] HITS file was successfully produced:
[2025-10-11 16:40:13] -rw------- 1 boinc boinc 189980704 Oct 11 16:39 shared/HITS.pool.root.1
[2025-10-11 16:40:13]  *** Contents of shared directory: ***
[2025-10-11 16:40:13] total 401876
[2025-10-11 16:40:13] -rw-r--r-- 2 boinc boinc 219591239 Oct 11 14:38 ATLAS.root_0
[2025-10-11 16:40:13] -rw-r--r-- 2 boinc boinc    569683 Oct 11 14:38 input.tar.gz
[2025-10-11 16:40:13] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:38 start_atlas.sh
[2025-10-11 16:40:13] -rw------- 1 boinc boinc 189980704 Oct 11 16:39 HITS.pool.root.1
[2025-10-11 16:40:13] -rw------- 1 boinc boinc   1341440 Oct 11 16:40 result.tar.gz
16:40:15 (1922025): run_atlas exited; CPU time 14088.643773
16:40:15 (1922025): called boinc_finish(0)

</stderr_txt>
]]>

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