Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:40:18 (1788074): wrapper (7.7.26015): starting
05:40:18 (1788074): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 05:40:18] Arguments: --nthreads 3
[2025-10-13 05:40:18] Threads: 3
[2025-10-13 05:40:18] Checking for CVMFS
[2025-10-13 05:40:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:40:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:40:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:40:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:40:19] 2.9.2.0 1687637 330 61096 151647 2 57 21166871 36864001 0 130560 0 262616 99.987 13424 443 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 05:40:19] CVMFS is ok
[2025-10-13 05:40:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:40:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:40:19] Further information can be found at the LHC@home message board.
[2025-10-13 05:40:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:40:19] Checking for apptainer binary...
[2025-10-13 05:40:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:40:19] Running /usr/bin/apptainer --version
[2025-10-13 05:40:19] apptainer version 1.4.1-1.1
[2025-10-13 05:40:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:40:19] atlasA215a
[2025-10-13 05:40:19] apptainer works
[2025-10-13 05:40:19] Set ATHENA_PROC_NUMBER=3
[2025-10-13 05:40:19] Set ATHENA_CORE_NUMBER=3
[2025-10-13 05:40:19] Starting ATLAS job with PandaID=6827325860
[2025-10-13 05:40:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:55:36]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:55:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 06:55:36]  replicas=None
[2025-10-13 06:55:36]  scope=mc23_13p6TeV
[2025-10-13 06:55:36]  status=None
[2025-10-13 06:55:36]  status_code=0
[2025-10-13 06:55:36]  storage_token=
[2025-10-13 06:55:36]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6827325860/log.46376905._028805.job.log.tgz.1
[2025-10-13 06:55:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/92/log.46376905._028805.job.log.tgz.1
[2025-10-13 06:55:36]  workdir=None
[2025-10-13 06:55:36] ]
[2025-10-13 06:55:36] 2025-10-13 04:54:37,088 | INFO     | transferring file log.46376905._028805.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6827325860/log.46376905._028805.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 06:55:36] 2025-10-13 04:54:37,088 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6827325860/log.46376905._028805.job.log.tgz.1 /local/data/boinc/slots/0/log.46376905._0288
[2025-10-13 06:55:36] 2025-10-13 04:54:37,101 | INFO     | adding to output.list: log.46376905._028805.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/92/log.46376905._028805.job.log.tg
[2025-10-13 06:55:36] 2025-10-13 04:54:37,102 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:55:36] 2025-10-13 04:54:37,102 | INFO     | summary of transferred files:
[2025-10-13 06:55:36] 2025-10-13 04:54:37,102 | INFO     |  -- lfn=log.46376905._028805.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:55:36] 2025-10-13 04:54:37,102 | INFO     | stage-out finished correctly
[2025-10-13 06:55:36] 2025-10-13 04:54:37,131 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:55:36] 2025-10-13 04:54:37,158 | INFO     | job 6827325860 has state=finished
[2025-10-13 06:55:36] 2025-10-13 04:54:37,158 | INFO     | preparing for final server update for job 6827325860 in state='finished'
[2025-10-13 06:55:36] 2025-10-13 04:54:37,159 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:55:36] 2025-10-13 04:54:37,159 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:55:36] 2025-10-13 04:54:37,159 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:55:36] 2025-10-13 04:54:37,159 | INFO     | job 6827325860 has finished - writing final server update
[2025-10-13 06:55:36] 2025-10-13 04:54:37,159 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:55:36] 2025-10-13 04:54:37,160 | INFO     | executing command: lscpu
[2025-10-13 06:55:36] 2025-10-13 04:54:37,173 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:55:36] 2025-10-13 04:54:37,380 | WARNING  | process 1798232 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 06:55:36] 2025-10-13 04:54:37,380 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6827325860/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:55:36] 2025-10-13 04:54:37,423 | INFO     | number of running child processes to parent process 1798232: 1
[2025-10-13 06:55:36] 2025-10-13 04:54:37,423 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:55:36] 2025-10-13 04:54:39,064 | INFO     | time since job start (4454s) is within the limit (172800.0s)
[2025-10-13 06:55:36] 2025-10-13 04:54:39,926 | INFO     | monitor loop #343: job 0:6827325860 is in state 'finished'
[2025-10-13 06:55:36] 2025-10-13 04:54:39,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:55:36] 2025-10-13 04:54:41,069 | INFO     | time since job start (4456s) is within the limit (172800.0s)
[2025-10-13 06:55:36] 2025-10-13 04:54:42,201 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 06:55:36] 2025-10-13 04:54:42,203 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3676.544916666667
[2025-10-13 06:55:36] 2025-10-13 04:54:42,204 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6827325860/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:55:36] 2025-10-13 04:54:42,204 | INFO     | extracted standard info from prmon json
[2025-10-13 06:55:36] 2025-10-13 04:54:42,204 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:55:36] 2025-10-13 04:54:42,204 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:55:36] 2025-10-13 04:54:42,204 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:55:36] 2025-10-13 04:54:42,204 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:55:36] 2025-10-13 04:54:42,205 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:55:36] 2025-10-13 04:54:42,205 | INFO     | sum of square deviations: 89127252.5
[2025-10-13 06:55:36] 2025-10-13 04:54:42,205 | INFO     | sum of deviations: -8511234626.5
[2025-10-13 06:55:36] 2025-10-13 04:54:42,205 | INFO     | mean x: 1760329133.5
[2025-10-13 06:55:36] 2025-10-13 04:54:42,205 | INFO     | mean y: 2452681.0454545454
[2025-10-13 06:55:36] 2025-10-13 04:54:42,205 | INFO     | -- intersect: 168105629373.06723
[2025-10-13 06:55:36] 2025-10-13 04:54:42,205 | INFO     | intersect: 168105629373.06723
[2025-10-13 06:55:36] 2025-10-13 04:54:42,205 | INFO     | chi2: 0.055171779188949756
[2025-10-13 06:55:36] 2025-10-13 04:54:42,205 | INFO     | -- intersect: 168105629373.06723
[2025-10-13 06:55:36] 2025-10-13 04:54:42,205 | INFO     | current memory leak: -95.50 B/s (using 66 data points, chi2=0.06)
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | could have reported an average CPU frequency of 3813 MHz (6 samples)
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | ..............................
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | . Timing measurements:
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | . get job = 0 s
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | . initial setup = 1 s
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | . payload setup = 3 s
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | . stage-in = 0 s
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | . payload execution = 4431 s
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | . stage-out = 0 s
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | . log creation = 0 s
[2025-10-13 06:55:36] 2025-10-13 04:54:42,206 | INFO     | ..............................
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | 
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | job summary report
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | --------------------------------------------------
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | PanDA job id: 6827325860
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | task id: 46376905
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | errors: (none)
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | pilot state: finished 
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | transexitcode: 0
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | exeerrorcode: 0
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | exeerrordiag: 
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | exitcode: 0
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | exitmsg: OK
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | cpuconsumptiontime: 12602 s
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | nevents: 400
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | neventsw: 0
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | pid: 1798232
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | pgrp: 1798232
[2025-10-13 06:55:36] 2025-10-13 04:54:42,313 | INFO     | corecount: 3
[2025-10-13 06:55:36] 2025-10-13 04:54:42,314 | INFO     | event service: False
[2025-10-13 06:55:36] 2025-10-13 04:54:42,314 | INFO     | sizes: {0: 2348817, 2: 2349079, 10: 2349107, 4438: 2384373, 4443: 2384511}
[2025-10-13 06:55:36] 2025-10-13 04:54:42,314 | INFO     | --------------------------------------------------
[2025-10-13 06:55:36] 2025-10-13 04:54:42,314 | INFO     | 
[2025-10-13 06:55:36] 2025-10-13 04:54:42,314 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 06:55:36] 2025-10-13 04:54:42,328 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,328 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,328 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,328 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | job 6827325860 has completed (purged errors)
[2025-10-13 06:55:36] 2025-10-13 04:54:42,329 | INFO     | overall cleanup function is called
[2025-10-13 06:55:36] 2025-10-13 04:54:43,335 | INFO     | --- collectZombieJob: --- 10, [1798232]
[2025-10-13 06:55:36] 2025-10-13 04:54:43,335 | INFO     | zombie collector waiting for pid 1798232
[2025-10-13 06:55:36] 2025-10-13 04:54:43,335 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:55:36] 2025-10-13 04:54:43,335 | INFO     | collected zombie processes
[2025-10-13 06:55:36] 2025-10-13 04:54:43,335 | INFO     | will attempt to kill all subprocesses of pid=1798232
[2025-10-13 06:55:36] 2025-10-13 04:54:43,383 | INFO     | process IDs to be killed: [1798232] (in reverse order)
[2025-10-13 06:55:36] 2025-10-13 04:54:43,410 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:55:36] 2025-10-13 04:54:43,410 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:55:36] 2025-10-13 04:54:43,412 | INFO     | did not find any defunct processes belonging to 1798232
[2025-10-13 06:55:36] 2025-10-13 04:54:43,413 | INFO     | did not find any defunct processes belonging to 1798232
[2025-10-13 06:55:36] 2025-10-13 04:54:43,413 | INFO     | ready for new job
[2025-10-13 06:55:36] 2025-10-13 04:54:43,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:55:36] 2025-10-13 04:54:43,414 | INFO     | ***************************************
[2025-10-13 06:55:36] 2025-10-13 04:54:43,414 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 06:55:36] 2025-10-13 04:54:43,414 | INFO     | ***************************************
[2025-10-13 06:55:36] 2025-10-13 04:54:43,414 | INFO     | 
[2025-10-13 06:55:36] 2025-10-13 04:54:43,414 | INFO     | architecture information:
[2025-10-13 06:55:36] 2025-10-13 04:54:43,414 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:55:36] 2025-10-13 04:54:43,424 | INFO     | cat /etc/os-release:
[2025-10-13 06:55:36] NAME="CentOS Linux"
[2025-10-13 06:55:36] VERSION="7 (Core)"
[2025-10-13 06:55:36] ID="centos"
[2025-10-13 06:55:36] ID_LIKE="rhel fedora"
[2025-10-13 06:55:36] VERSION_ID="7"
[2025-10-13 06:55:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:55:36] ANSI_COLOR="0;31"
[2025-10-13 06:55:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:55:36] HOME_URL="https://www.centos.org/"
[2025-10-13 06:55:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:55:36] 
[2025-10-13 06:55:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:55:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:55:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:55:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:55:36] 
[2025-10-13 06:55:36] 2025-10-13 04:54:43,424 | INFO     | ***************************************
[2025-10-13 06:55:36] 2025-10-13 04:54:43,927 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 06:55:36] 2025-10-13 04:54:43,940 | INFO     | sufficient remaining disk space (383090950144 B)
[2025-10-13 06:55:36] 2025-10-13 04:54:43,941 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:55:36] 2025-10-13 04:54:43,941 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:55:36] 2025-10-13 04:54:43,941 | INFO     | update_server=False
[2025-10-13 06:55:36] 2025-10-13 04:54:43,941 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:55:36] 2025-10-13 04:54:43,941 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:55:36] 2025-10-13 04:54:43,941 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:55:36] 2025-10-13 04:54:43,941 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:55:36] 2025-10-13 04:54:43,941 | INFO     | aborting loop
[2025-10-13 06:55:36] 2025-10-13 04:54:44,233 | INFO     | all data control threads have been joined
[2025-10-13 06:55:36] 2025-10-13 04:54:44,610 | INFO     | all job control threads have been joined
[2025-10-13 06:55:36] 2025-10-13 04:54:44,859 | INFO     | all payload control threads have been joined
[2025-10-13 06:55:36] 2025-10-13 04:54:44,943 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:44,943 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:44,947 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:45,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:55:36] 2025-10-13 04:54:45,239 | INFO     | [data] control thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:45,292 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:45,295 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:45,616 | INFO     | [job] control thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:45,844 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:45,845 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:45,845 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:45,855 | INFO     | [job] validate thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:45,863 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:45,865 | INFO     | [payload] control thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:47,144 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:47,948 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:54:54,346 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:55:36] 2025-10-13 04:54:55,351 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:55:36] 2025-10-13 04:55:14,205 | INFO     | PID=1791793 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:55:36] 2025-10-13 04:55:14,205 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:55:36] 2025-10-13 04:55:14,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:55:36] 2025-10-13 04:55:14,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:55:36] 2025-10-13 04:55:24,039 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-13 06:55:36] 2025-10-13 04:55:30,821 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:55:36] 2025-10-13 04:55:31,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140541719140160)>', '<ExcThread(monitor, started 140540741916416)>']
[2025-10-13 06:55:36] 2025-10-13 04:55:32,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:55:36] 2025-10-13 04:55:32,293 | INFO     | [monitor] control thread has ended
[2025-10-13 06:55:36] 2025-10-13 04:55:36,696 | INFO     | all workflow threads have been joined
[2025-10-13 06:55:36] 2025-10-13 04:55:36,697 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:55:36] 2025-10-13 04:55:36,697 | INFO     | traces error code: 0
[2025-10-13 06:55:36] 2025-10-13 04:55:36,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:55:36] 2025-10-13 04:55:36,748 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:55:36] 2025-10-13 04:55:36,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:55:36] 2025-10-13 04:55:36,753 [wrapper] pilotpid: 1791793
[2025-10-13 06:55:36] 2025-10-13 04:55:36,755 [wrapper] Pilot exit status: 0
[2025-10-13 06:55:36] 2025-10-13 04:55:36,763 [wrapper] pandaids: 6827325860
[2025-10-13 06:55:36] 2025-10-13 04:55:36,782 [wrapper] cleanup supervisor_pilot 1813101 1791794
[2025-10-13 06:55:36] 2025-10-13 04:55:36,785 [wrapper] Test setup, not cleaning
[2025-10-13 06:55:36] 2025-10-13 04:55:36,787 [wrapper] apfmon messages muted
[2025-10-13 06:55:36] 2025-10-13 04:55:36,790 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:55:36] 2025-10-13 04:55:36,793 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:55:36]  *** Error codes and diagnostics ***
[2025-10-13 06:55:36]     "exeErrorCode": 0,
[2025-10-13 06:55:36]     "exeErrorDiag": "",
[2025-10-13 06:55:36]     "pilotErrorCode": 0,
[2025-10-13 06:55:36]     "pilotErrorDiag": "",
[2025-10-13 06:55:36]  *** Listing of results directory ***
[2025-10-13 06:55:36] total 388216
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc    552446 Oct  2 21:29 pilot3.tar.gz
[2025-10-13 06:55:36] -rwx------ 1 boinc boinc     36292 Oct  2 21:38 runpilot2-wrapper.sh
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc      5112 Oct  2 21:38 queuedata.json
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:55:36] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:40 run_atlas
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:40 job.xml
[2025-10-13 06:55:36] -rw-r--r-- 2 boinc boinc 213953329 Oct 13 05:40 EVNT.46376901._000919.pool.root.1
[2025-10-13 06:55:36] -rw-r--r-- 2 boinc boinc    565603 Oct 13 05:40 input.tar.gz
[2025-10-13 06:55:36] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:40 start_atlas.sh
[2025-10-13 06:55:36] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:40 shared
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:40 boinc_setup_complete
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc      6446 Oct 13 05:40 init_data.xml
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:40 boinc_lockfile
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc      2518 Oct 13 05:40 pandaJob.out
[2025-10-13 06:55:36] -rw------- 1 boinc boinc    974373 Oct 13 05:40 agis_schedconf.cvmfs.json
[2025-10-13 06:55:36] -rw------- 1 boinc boinc   1560580 Oct 13 05:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:55:36] drwx------ 4 boinc boinc      4096 Oct 13 05:40 pilot3
[2025-10-13 06:55:36] -rw------- 1 boinc boinc 177902877 Oct 13 06:54 HITS.46376905._028805.pool.root.1
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc       529 Oct 13 06:54 boinc_task_state.xml
[2025-10-13 06:55:36] -rw------- 1 boinc boinc      1016 Oct 13 06:54 memory_monitor_summary.json
[2025-10-13 06:55:36] -rw------- 1 boinc boinc    235353 Oct 13 06:54 log.46376905._028805.job.log.tgz.1
[2025-10-13 06:55:36] -rw------- 1 boinc boinc      7759 Oct 13 06:54 heartbeat.json
[2025-10-13 06:55:36] -rw------- 1 boinc boinc        95 Oct 13 06:55 pilot_heartbeat.json
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc      8192 Oct 13 06:55 boinc_mmap_file
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc        27 Oct 13 06:55 wrapper_checkpoint.txt
[2025-10-13 06:55:36] -rw------- 1 boinc boinc      4824 Oct 13 06:55 pilotlog.txt
[2025-10-13 06:55:36] -rw------- 1 boinc boinc    657694 Oct 13 06:55 log.46376905._028805.job.log.1
[2025-10-13 06:55:36] -rw------- 1 boinc boinc       357 Oct 13 06:55 output.list
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc       620 Oct 13 06:55 runtime_log
[2025-10-13 06:55:36] -rw------- 1 boinc boinc    911360 Oct 13 06:55 result.tar.gz
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc      8797 Oct 13 06:55 runtime_log.err
[2025-10-13 06:55:36] -rw------- 1 boinc boinc       662 Oct 13 06:55 UhQKDmFJeO8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbSFNDmGDWkyn.diag
[2025-10-13 06:55:36] -rw-r--r-- 1 boinc boinc     21816 Oct 13 06:55 stderr.txt
[2025-10-13 06:55:36] HITS file was successfully produced:
[2025-10-13 06:55:36] -rw------- 1 boinc boinc 177902877 Oct 13 06:54 shared/HITS.pool.root.1
[2025-10-13 06:55:36]  *** Contents of shared directory: ***
[2025-10-13 06:55:36] total 384148
[2025-10-13 06:55:36] -rw-r--r-- 2 boinc boinc 213953329 Oct 13 05:40 ATLAS.root_0
[2025-10-13 06:55:36] -rw-r--r-- 2 boinc boinc    565603 Oct 13 05:40 input.tar.gz
[2025-10-13 06:55:36] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:40 start_atlas.sh
[2025-10-13 06:55:36] -rw------- 1 boinc boinc 177902877 Oct 13 06:54 HITS.pool.root.1
[2025-10-13 06:55:36] -rw------- 1 boinc boinc    911360 Oct 13 06:55 result.tar.gz
06:55:38 (1788074): run_atlas exited; CPU time 12620.645132
06:55:38 (1788074): called boinc_finish(0)

</stderr_txt>
]]>

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