Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:06:03 (2917742): wrapper (7.7.26015): starting
06:06:03 (2917742): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 06:06:03] Arguments: --nthreads 4
[2025-10-12 06:06:03] Threads: 4
[2025-10-12 06:06:03] Checking for CVMFS
[2025-10-12 06:06:03] No cvmfs_config command found, will try listing directly
[2025-10-12 06:06:03] CVMFS is ok
[2025-10-12 06:06:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:06:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:06:03] Further information can be found at the LHC@home message board.
[2025-10-12 06:06:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:06:03] Checking for apptainer binary...
[2025-10-12 06:06:03] which: no apptainer in ((null))
[2025-10-12 06:06:03] apptainer is not installed, using version from CVMFS
[2025-10-12 06:06:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:06:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2025-10-12 06:06:03] apptainer works
[2025-10-12 06:06:03] Set ATHENA_PROC_NUMBER=4
[2025-10-12 06:06:03] Set ATHENA_CORE_NUMBER=4
[2025-10-12 06:06:03] Starting ATLAS job with PandaID=6837786196
[2025-10-12 06:06:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 09:12:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 09:12:53] 2025-10-12 07:01:55,325 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 09:12:53] 2025-10-12 07:01:55,329 | INFO     | fitting pss+swap vs Time
[2025-10-12 09:12:53] 2025-10-12 07:01:55,329 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,330 | INFO     | sum of deviations: 18311878164.0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,330 | INFO     | mean x: 1760247246.0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,330 | INFO     | mean y: 2296200.7919075144
[2025-10-12 09:12:53] 2025-10-12 07:01:55,330 | INFO     | -- intersect: -20074959094.78415
[2025-10-12 09:12:53] 2025-10-12 07:01:55,330 | INFO     | intersect: -20074959094.78415
[2025-10-12 09:12:53] 2025-10-12 07:01:55,331 | INFO     | chi2: 2.0503998208507177
[2025-10-12 09:12:53] 2025-10-12 07:01:55,331 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,332 | INFO     | sum of deviations: 27310138803.5
[2025-10-12 09:12:53] 2025-10-12 07:01:55,332 | INFO     | mean x: 1760247093.5
[2025-10-12 09:12:53] 2025-10-12 07:01:55,332 | INFO     | mean y: 2306087.6726190476
[2025-10-12 09:12:53] 2025-10-12 07:01:55,332 | INFO     | -- intersect: -32694600146.86648
[2025-10-12 09:12:53] 2025-10-12 07:01:55,332 | INFO     | intersect: -32694600146.86648
[2025-10-12 09:12:53] 2025-10-12 07:01:55,333 | INFO     | chi2: 1.385285600510092
[2025-10-12 09:12:53] 2025-10-12 07:01:55,333 | INFO     | current chi2=1.385285600510092 (change=32.43826953050882 %)
[2025-10-12 09:12:53] 2025-10-12 07:01:55,333 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,334 | INFO     | sum of deviations: 26425055491.0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,334 | INFO     | mean x: 1760246941.0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,334 | INFO     | mean y: 2305027.963190184
[2025-10-12 09:12:53] 2025-10-12 07:01:55,334 | INFO     | -- intersect: -34636636705.7817
[2025-10-12 09:12:53] 2025-10-12 07:01:55,334 | INFO     | intersect: -34636636705.7817
[2025-10-12 09:12:53] 2025-10-12 07:01:55,335 | INFO     | chi2: 1.3858061286074772
[2025-10-12 09:12:53] 2025-10-12 07:01:55,335 | INFO     | current chi2=1.3858061286074772 (change=-0.03757550769267806 %)
[2025-10-12 09:12:53] 2025-10-12 07:01:55,335 | INFO     | right removable region: 162
[2025-10-12 09:12:53] 2025-10-12 07:01:55,335 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,336 | INFO     | sum of deviations: -4605893114.499999
[2025-10-12 09:12:53] 2025-10-12 07:01:55,336 | INFO     | mean x: 1760247398.5
[2025-10-12 09:12:53] 2025-10-12 07:01:55,336 | INFO     | mean y: 2321679.9226190476
[2025-10-12 09:12:53] 2025-10-12 07:01:55,336 | INFO     | -- intersect: 5516701612.923167
[2025-10-12 09:12:53] 2025-10-12 07:01:55,336 | INFO     | intersect: 5516701612.923167
[2025-10-12 09:12:53] 2025-10-12 07:01:55,337 | INFO     | chi2: 0.6878460821807552
[2025-10-12 09:12:53] 2025-10-12 07:01:55,337 | INFO     | current chi2=0.6878460821807552 (change=66.45307538627439 %)
[2025-10-12 09:12:53] 2025-10-12 07:01:55,337 | INFO     | sum of square deviations: 1342841922.0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,338 | INFO     | sum of deviations: -5073689945.000001
[2025-10-12 09:12:53] 2025-10-12 07:01:55,338 | INFO     | mean x: 1760247551.0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,338 | INFO     | mean y: 2322228.1349693253
[2025-10-12 09:12:53] 2025-10-12 07:01:55,338 | INFO     | -- intersect: 6653105283.014586
[2025-10-12 09:12:53] 2025-10-12 07:01:55,338 | INFO     | intersect: 6653105283.014586
[2025-10-12 09:12:53] 2025-10-12 07:01:55,338 | INFO     | chi2: 0.6851743862986481
[2025-10-12 09:12:53] 2025-10-12 07:01:55,339 | INFO     | current chi2=0.6851743862986481 (change=0.38841478512702327 %)
[2025-10-12 09:12:53] 2025-10-12 07:01:55,339 | INFO     | left removable region: 20
[2025-10-12 09:12:53] 2025-10-12 07:01:55,339 | INFO     | sum of square deviations: 887813855.5
[2025-10-12 09:12:53] 2025-10-12 07:01:55,340 | INFO     | sum of deviations: 2242967743.0000005
[2025-10-12 09:12:53] 2025-10-12 07:01:55,340 | INFO     | mean x: 1760247520.5
[2025-10-12 09:12:53] 2025-10-12 07:01:55,340 | INFO     | mean y: 2335719.1971830986
[2025-10-12 09:12:53] 2025-10-12 07:01:55,340 | INFO     | -- intersect: -4444743343.286802
[2025-10-12 09:12:53] 2025-10-12 07:01:55,340 | INFO     | intersect: -4444743343.286802
[2025-10-12 09:12:53] 2025-10-12 07:01:55,340 | INFO     | chi2: 0.0007649894331783871
[2025-10-12 09:12:53] 2025-10-12 07:01:55,340 | INFO     | -- intersect: -4444743343.286802
[2025-10-12 09:12:53] 2025-10-12 07:01:55,340 | INFO     | current memory leak: 2.53 B/s (using 142 data points, chi2=0.00)
[2025-10-12 09:12:53] 2025-10-12 07:01:55,341 | INFO     | could have reported an average CPU frequency of 2674 MHz (9 samples)
[2025-10-12 09:12:53] 2025-10-12 07:01:55,341 | INFO     | ..............................
[2025-10-12 09:12:53] 2025-10-12 07:01:55,341 | INFO     | . Timing measurements:
[2025-10-12 09:12:53] 2025-10-12 07:01:55,341 | INFO     | . get job = 0 s
[2025-10-12 09:12:53] 2025-10-12 07:01:55,341 | INFO     | . initial setup = 1 s
[2025-10-12 09:12:53] 2025-10-12 07:01:55,341 | INFO     | . payload setup = 5 s
[2025-10-12 09:12:53] 2025-10-12 07:01:55,341 | INFO     | . stage-in = 0 s
[2025-10-12 09:12:53] 2025-10-12 07:01:55,342 | INFO     | . payload execution = 10505 s
[2025-10-12 09:12:53] 2025-10-12 07:01:55,342 | INFO     | . stage-out = 0 s
[2025-10-12 09:12:53] 2025-10-12 07:01:55,342 | INFO     | . log creation = 0 s
[2025-10-12 09:12:53] 2025-10-12 07:01:55,342 | INFO     | ..............................
[2025-10-12 09:12:53] 2025-10-12 07:01:55,438 | INFO     | 
[2025-10-12 09:12:53] 2025-10-12 07:01:55,438 | INFO     | job summary report
[2025-10-12 09:12:53] 2025-10-12 07:01:55,438 | INFO     | --------------------------------------------------
[2025-10-12 09:12:53] 2025-10-12 07:01:55,439 | INFO     | PanDA job id: 6837786196
[2025-10-12 09:12:53] 2025-10-12 07:01:55,439 | INFO     | task id: 46676269
[2025-10-12 09:12:53] 2025-10-12 07:01:55,439 | INFO     | errors: (none)
[2025-10-12 09:12:53] 2025-10-12 07:01:55,439 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 09:12:53] 2025-10-12 07:01:55,439 | INFO     | pilot state: finished 
[2025-10-12 09:12:53] 2025-10-12 07:01:55,439 | INFO     | transexitcode: 0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,439 | INFO     | exeerrorcode: 0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,439 | INFO     | exeerrordiag: 
[2025-10-12 09:12:53] 2025-10-12 07:01:55,439 | INFO     | exitcode: 0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,439 | INFO     | exitmsg: OK
[2025-10-12 09:12:53] 2025-10-12 07:01:55,440 | INFO     | cpuconsumptiontime: 40399 s
[2025-10-12 09:12:53] 2025-10-12 07:01:55,440 | INFO     | nevents: 400
[2025-10-12 09:12:53] 2025-10-12 07:01:55,440 | INFO     | neventsw: 0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,440 | INFO     | pid: 2937737
[2025-10-12 09:12:53] 2025-10-12 07:01:55,440 | INFO     | pgrp: 2937737
[2025-10-12 09:12:53] 2025-10-12 07:01:55,440 | INFO     | corecount: 4
[2025-10-12 09:12:53] 2025-10-12 07:01:55,440 | INFO     | event service: False
[2025-10-12 09:12:53] 2025-10-12 07:01:55,440 | INFO     | sizes: {0: 2348641, 1: 2348896, 5: 2349158, 12: 2349214, 10515: 2378048, 10516: 2387068, 10519: 2387252, 10526: 2387510}
[2025-10-12 09:12:53] 2025-10-12 07:01:55,440 | INFO     | --------------------------------------------------
[2025-10-12 09:12:53] 2025-10-12 07:01:55,440 | INFO     | 
[2025-10-12 09:12:53] 2025-10-12 07:01:55,441 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2025-10-12 09:12:53] 2025-10-12 07:01:55,494 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,495 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,495 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,495 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,496 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 09:12:53] 2025-10-12 07:01:55,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,496 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 09:12:53] 2025-10-12 07:01:55,496 | INFO     | job 6837786196 has completed (purged errors)
[2025-10-12 09:12:53] 2025-10-12 07:01:55,497 | INFO     | overall cleanup function is called
[2025-10-12 09:12:53] 2025-10-12 07:01:55,927 | INFO     | PID=2923251 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 09:12:53] 2025-10-12 07:01:55,927 | INFO     | .. there are 5 such processes running
[2025-10-12 09:12:53] 2025-10-12 07:01:56,505 | INFO     | --- collectZombieJob: --- 10, [2937737]
[2025-10-12 09:12:53] 2025-10-12 07:01:56,506 | INFO     | zombie collector waiting for pid 2937737
[2025-10-12 09:12:53] 2025-10-12 07:01:56,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 09:12:53] 2025-10-12 07:01:56,506 | INFO     | collected zombie processes
[2025-10-12 09:12:53] 2025-10-12 07:01:56,506 | INFO     | will attempt to kill all subprocesses of pid=2937737
[2025-10-12 09:12:53] 2025-10-12 07:01:56,869 | INFO     | process IDs to be killed: [2937737] (in reverse order)
[2025-10-12 09:12:53] 2025-10-12 07:01:56,979 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 09:12:53] 2025-10-12 07:01:56,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 09:12:53] 2025-10-12 07:01:56,992 | INFO     | did not find any defunct processes belonging to 2937737
[2025-10-12 09:12:53] 2025-10-12 07:01:57,004 | INFO     | did not find any defunct processes belonging to 2937737
[2025-10-12 09:12:53] 2025-10-12 07:01:57,004 | INFO     | ready for new job
[2025-10-12 09:12:53] 2025-10-12 07:01:57,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 09:12:53] 2025-10-12 07:01:57,007 | INFO     | ***************************************
[2025-10-12 09:12:53] 2025-10-12 07:01:57,007 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 09:12:53] 2025-10-12 07:01:57,007 | INFO     | ***************************************
[2025-10-12 09:12:53] 2025-10-12 07:01:57,007 | INFO     | 
[2025-10-12 09:12:53] 2025-10-12 07:01:57,011 | INFO     | architecture information:
[2025-10-12 09:12:53] 2025-10-12 07:01:57,011 | INFO     | executing command: cat /etc/os-release
[2025-10-12 09:12:53] 2025-10-12 07:01:57,028 | INFO     | cat /etc/os-release:
[2025-10-12 09:12:53] NAME="CentOS Linux"
[2025-10-12 09:12:53] VERSION="7 (Core)"
[2025-10-12 09:12:53] ID="centos"
[2025-10-12 09:12:53] ID_LIKE="rhel fedora"
[2025-10-12 09:12:53] VERSION_ID="7"
[2025-10-12 09:12:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 09:12:53] ANSI_COLOR="0;31"
[2025-10-12 09:12:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 09:12:53] HOME_URL="https://www.centos.org/"
[2025-10-12 09:12:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 09:12:53] 
[2025-10-12 09:12:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 09:12:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 09:12:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 09:12:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 09:12:53] 
[2025-10-12 09:12:53] 2025-10-12 07:01:57,028 | INFO     | ***************************************
[2025-10-12 09:12:53] 2025-10-12 07:01:57,531 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2025-10-12 09:12:53] 2025-10-12 07:01:57,548 | INFO     | sufficient remaining disk space (691652263936 B)
[2025-10-12 09:12:53] 2025-10-12 07:01:57,549 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 09:12:53] 2025-10-12 07:01:57,549 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 09:12:53] 2025-10-12 07:01:57,549 | INFO     | update_server=False
[2025-10-12 09:12:53] 2025-10-12 07:01:57,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 09:12:53] 2025-10-12 07:01:57,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 09:12:53] 2025-10-12 07:01:57,702 | INFO     | all payload control threads have been joined
[2025-10-12 09:12:53] 2025-10-12 07:01:57,820 | INFO     | all data control threads have been joined
[2025-10-12 09:12:53] 2025-10-12 07:01:58,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:12:53] 2025-10-12 07:01:58,042 | INFO     | aborting loop
[2025-10-12 09:12:53] 2025-10-12 07:01:58,555 | INFO     | [job] retrieve thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:58,661 | INFO     | [payload] failed_post thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:58,706 | INFO     | [payload] control thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:58,822 | INFO     | [data] control thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:58,831 | INFO     | all job control threads have been joined
[2025-10-12 09:12:53] 2025-10-12 07:01:59,041 | INFO     | [payload] validate_post thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:59,046 | INFO     | [job] job monitor thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:59,182 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:59,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 09:12:53] 2025-10-12 07:01:59,542 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:59,554 | INFO     | [data] copytool_out thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:59,688 | INFO     | [job] validate thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:59,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:59,834 | INFO     | [job] control thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:01:59,925 | INFO     | [data] copytool_in thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:02:00,051 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:02:00,448 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 09:12:53] 2025-10-12 07:02:01,453 | INFO     | [job] queue monitor thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:02:03,547 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 09:12:53] 2025-10-12 07:02:28,421 | INFO     | PID=2923251 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 09:12:53] 2025-10-12 07:02:28,421 | INFO     | .. there are 5 such processes running
[2025-10-12 09:12:53] 2025-10-12 07:02:28,422 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 09:12:53] 2025-10-12 07:02:28,422 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 09:12:53] 2025-10-12 07:02:28,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 09:12:53] 2025-10-12 07:02:30,771 | INFO     | [monitor] cgroup control has ended
[2025-10-12 09:12:53] 2025-10-12 07:02:31,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22841890244416)>', '<ExcThread(monitor, started 22841653167872)>']
[2025-10-12 09:12:53] 2025-10-12 07:02:31,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 09:12:53] 2025-10-12 07:02:31,438 | INFO     | [monitor] control thread has ended
[2025-10-12 09:12:53] 2025-10-12 07:02:36,336 | INFO     | all workflow threads have been joined
[2025-10-12 09:12:53] 2025-10-12 07:02:36,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 09:12:53] 2025-10-12 07:02:36,337 | INFO     | traces error code: 0
[2025-10-12 09:12:53] 2025-10-12 07:02:36,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 09:12:53] 2025-10-12 07:02:36,483 [wrapper] ==== pilot stdout END ====
[2025-10-12 09:12:53] 2025-10-12 07:02:36,486 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 09:12:53] 2025-10-12 07:02:36,489 [wrapper] pilotpid: 2923251
[2025-10-12 09:12:53] 2025-10-12 07:02:36,491 [wrapper] Pilot exit status: 0
[2025-10-12 09:12:53] 2025-10-12 07:02:36,502 [wrapper] pandaids: 6837786196
[2025-10-12 09:12:53] 2025-10-12 07:02:36,574 [wrapper] cleanup supervisor_pilot 3162248 2923252
[2025-10-12 09:12:53] 2025-10-12 07:02:36,577 [wrapper] Test setup, not cleaning
[2025-10-12 09:12:53] 2025-10-12 07:02:36,580 [wrapper] apfmon messages muted
[2025-10-12 09:12:53] 2025-10-12 07:02:36,583 [wrapper] ==== wrapper stdout END ====
[2025-10-12 09:12:53] 2025-10-12 07:02:36,585 [wrapper] ==== wrapper stderr END ====
[2025-10-12 09:12:53]  *** Error codes and diagnostics ***
[2025-10-12 09:12:53]     "exeErrorCode": 0,
[2025-10-12 09:12:53]     "exeErrorDiag": "",
[2025-10-12 09:12:53]     "pilotErrorCode": 0,
[2025-10-12 09:12:53]     "pilotErrorDiag": "",
[2025-10-12 09:12:53]  *** Listing of results directory ***
[2025-10-12 09:12:53] total 412372
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc    557409 Oct 10 23:35 pilot3.tar.gz
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc      5112 Oct 10 23:41 queuedata.json
[2025-10-12 09:12:53] -rwx------ 1 boinc boinc     36292 Oct 10 23:42 runpilot2-wrapper.sh
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc       100 Oct 12 06:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 09:12:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 06:05 run_atlas
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc       105 Oct 12 06:05 job.xml
[2025-10-12 09:12:53] -rw-r--r-- 2 boinc boinc 220814848 Oct 12 06:06 EVNT.46676267._001847.pool.root.1
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc      6634 Oct 12 06:06 init_data.xml
[2025-10-12 09:12:53] -rw-r--r-- 2 boinc boinc     15120 Oct 12 06:06 start_atlas.sh
[2025-10-12 09:12:53] drwxrwx--x 2 boinc boinc      4096 Oct 12 06:06 shared
[2025-10-12 09:12:53] -rw-r--r-- 2 boinc boinc    569686 Oct 12 06:06 input.tar.gz
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc         0 Oct 12 06:06 boinc_lockfile
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc      2550 Oct 12 06:06 pandaJob.out
[2025-10-12 09:12:53] -rw------- 1 boinc boinc    975512 Oct 12 06:06 agis_schedconf.cvmfs.json
[2025-10-12 09:12:53] -rw------- 1 boinc boinc   1560580 Oct 12 06:06 agis_ddmendpoints.agis.ALL.json
[2025-10-12 09:12:53] drwx------ 5 boinc boinc      4096 Oct 12 06:06 pilot3
[2025-10-12 09:12:53] -rw------- 1 boinc boinc 193818279 Oct 12 09:01 HITS.46676269._045684.pool.root.1
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc       527 Oct 12 09:01 boinc_task_state.xml
[2025-10-12 09:12:53] -rw------- 1 boinc boinc      1033 Oct 12 09:01 memory_monitor_summary.json
[2025-10-12 09:12:53] -rw------- 1 boinc boinc    363596 Oct 12 09:01 log.46676269._045684.job.log.tgz.1
[2025-10-12 09:12:53] -rw------- 1 boinc boinc      7830 Oct 12 09:01 heartbeat.json
[2025-10-12 09:12:53] -rw------- 1 boinc boinc        95 Oct 12 09:02 pilot_heartbeat.json
[2025-10-12 09:12:53] -rw------- 1 boinc boinc      4833 Oct 12 09:02 pilotlog.txt
[2025-10-12 09:12:53] -rw------- 1 boinc boinc   1505286 Oct 12 09:02 log.46676269._045684.job.log.1
[2025-10-12 09:12:53] -rw------- 1 boinc boinc       357 Oct 12 09:02 output.list
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc       620 Oct 12 09:02 runtime_log
[2025-10-12 09:12:53] -rw------- 1 boinc boinc   1884160 Oct 12 09:02 result.tar.gz
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc      9070 Oct 12 09:02 runtime_log.err
[2025-10-12 09:12:53] -rw------- 1 boinc boinc       666 Oct 12 09:02 m76NDmg3ZR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTdQMDmGkJ3Yn.diag
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc        27 Oct 12 09:12 wrapper_checkpoint.txt
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc      8192 Oct 12 09:12 boinc_mmap_file
[2025-10-12 09:12:53] -rw-r--r-- 1 boinc boinc     20793 Oct 12 09:12 stderr.txt
[2025-10-12 09:12:53] HITS file was successfully produced:
[2025-10-12 09:12:53] -rw------- 1 boinc boinc 193818279 Oct 12 09:01 shared/HITS.pool.root.1
[2025-10-12 09:12:53]  *** Contents of shared directory: ***
[2025-10-12 09:12:53] total 407340
[2025-10-12 09:12:53] -rw-r--r-- 2 boinc boinc 220814848 Oct 12 06:06 ATLAS.root_0
[2025-10-12 09:12:53] -rw-r--r-- 2 boinc boinc     15120 Oct 12 06:06 start_atlas.sh
[2025-10-12 09:12:53] -rw-r--r-- 2 boinc boinc    569686 Oct 12 06:06 input.tar.gz
[2025-10-12 09:12:53] -rw------- 1 boinc boinc 193818279 Oct 12 09:01 HITS.pool.root.1
[2025-10-12 09:12:53] -rw------- 1 boinc boinc   1884160 Oct 12 09:02 result.tar.gz
09:12:55 (2917742): run_atlas exited; CPU time 40798.648135
09:12:55 (2917742): called boinc_finish(0)

</stderr_txt>
]]>

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