Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
03:30:46 (4070052): wrapper (7.7.26015): starting
03:30:46 (4070052): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 03:30:46] Arguments: --nthreads 12
[2025-10-11 03:30:46] Threads: 12
[2025-10-11 03:30:46] Checking for CVMFS
[2025-10-11 03:30:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 03:30:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 03:30:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 03:30:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 03:30:47] 2.11.0.0 3299214 1084 84508 151571 3 188 5026605 6144001 13830 130560 0 21351257 100.000 43148 211 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 03:30:47] CVMFS is ok
[2025-10-11 03:30:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 03:30:47] Checking for apptainer binary...
[2025-10-11 03:30:47] apptainer is not installed, using version from CVMFS
[2025-10-11 03:30:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 03:30:47] radiat0r
[2025-10-11 03:30:47] apptainer works
[2025-10-11 03:30:47] Set ATHENA_PROC_NUMBER=12
[2025-10-11 03:30:47] Set ATHENA_CORE_NUMBER=12
[2025-10-11 03:30:47] Starting ATLAS job with PandaID=6837730789
[2025-10-11 03:30:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 04:23:12]  *** The last 200 lines of the pilot log: ***
[2025-10-11 04:23:12] 2025-10-11 04:22:19,126 | INFO     |  -- lfn=log.46676269._044035.job.log.tgz.1, status_code=0, status=transferred
[2025-10-11 04:23:12] 2025-10-11 04:22:19,126 | INFO     | stage-out finished correctly
[2025-10-11 04:23:12] 2025-10-11 04:22:19,224 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-11 04:23:12] 2025-10-11 04:22:19,495 | INFO     | job 6837730789 has state=finished
[2025-10-11 04:23:12] 2025-10-11 04:22:19,495 | INFO     | preparing for final server update for job 6837730789 in state='finished'
[2025-10-11 04:23:12] 2025-10-11 04:22:19,496 | INFO     | this job has now completed (state=finished)
[2025-10-11 04:23:12] 2025-10-11 04:22:19,496 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-11 04:23:12] 2025-10-11 04:22:19,497 | INFO     | log transfer has been attempted: DONE
[2025-10-11 04:23:12] 2025-10-11 04:22:19,497 | INFO     | job 6837730789 has finished - writing final server update
[2025-10-11 04:23:12] 2025-10-11 04:22:19,497 | INFO     | total number of processed events: 400 (read)
[2025-10-11 04:23:12] 2025-10-11 04:22:19,498 | INFO     | executing command: lscpu
[2025-10-11 04:23:12] 2025-10-11 04:22:19,690 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-11 04:23:12] 2025-10-11 04:22:20,343 | INFO     | time since job start (3079s) is within the limit (172800.0s)
[2025-10-11 04:23:12] 2025-10-11 04:22:20,678 | WARNING  | process 4100316 can no longer be monitored (due to stat problems) - aborting
[2025-10-11 04:23:12] 2025-10-11 04:22:20,678 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6837730789/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 04:23:12] 2025-10-11 04:22:20,679 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6837730789/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 04:23:12] 2025-10-11 04:22:20,680 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-11 04:23:12] 2025-10-11 04:22:20,680 | WARNING  | maxPSS not found in memory monitor output
[2025-10-11 04:23:12] 2025-10-11 04:22:20,681 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4359047 B
[2025-10-11 04:23:12] 2025-10-11 04:22:20,681 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15934 B
[2025-10-11 04:23:12] 2025-10-11 04:22:20,681 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-10-11 04:23:12] 2025-10-11 04:22:22,375 | INFO     | PID=4078252 has CPU usage=20.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-11 04:23:12] 2025-10-11 04:22:22,376 | INFO     | .. there are 17 such processes running
[2025-10-11 04:23:12] 2025-10-11 04:22:23,376 | INFO     | time since job start (3082s) is within the limit (172800.0s)
[2025-10-11 04:23:12] 2025-10-11 04:22:25,379 | INFO     | time since job start (3084s) is within the limit (172800.0s)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,383 | INFO     | time since job start (3086s) is within the limit (172800.0s)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,502 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 04:23:12] 2025-10-11 04:22:27,527 | INFO     | sufficient remaining disk space (1725094166528 B)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,528 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,529 | INFO     | size of work directory /var/lib/boinc/slots/24/PanDA_Pilot-6837730789: 4646839 B (within 2537553920 B limit)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,529 | INFO     | pfn file=/var/lib/boinc/slots/24/PanDA_Pilot-6837730789/HITS.46676269._044035.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,530 | INFO     | total size of present files: 0 B (workdir size: 4646839 B)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,530 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/24/PanDA_Pilot-6837730789/HITS.46676269._044035.pool.root.1 since it does not exist
[2025-10-11 04:23:12] 2025-10-11 04:22:27,622 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2322.88607421875
[2025-10-11 04:23:12] 2025-10-11 04:22:27,687 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-6837730789/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,688 | INFO     | extracted standard info from prmon json
[2025-10-11 04:23:12] 2025-10-11 04:22:27,688 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 04:23:12] 2025-10-11 04:22:27,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 04:23:12] 2025-10-11 04:22:27,689 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 04:23:12] 2025-10-11 04:22:27,689 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 04:23:12] 2025-10-11 04:22:27,691 | INFO     | fitting pss+swap vs Time
[2025-10-11 04:23:12] 2025-10-11 04:22:27,691 | INFO     | sum of square deviations: 24640462.0
[2025-10-11 04:23:12] 2025-10-11 04:22:27,691 | INFO     | sum of deviations: 868439981.0
[2025-10-11 04:23:12] 2025-10-11 04:22:27,692 | INFO     | mean x: 1760155081.0
[2025-10-11 04:23:12] 2025-10-11 04:22:27,692 | INFO     | mean y: 2661443.5581395347
[2025-10-11 04:23:12] 2025-10-11 04:22:27,692 | INFO     | -- intersect: -62033068450.65787
[2025-10-11 04:23:12] 2025-10-11 04:22:27,692 | INFO     | intersect: -62033068450.65787
[2025-10-11 04:23:12] 2025-10-11 04:22:27,692 | INFO     | chi2: 0.035740933682935766
[2025-10-11 04:23:12] 2025-10-11 04:22:27,692 | INFO     | -- intersect: -62033068450.65787
[2025-10-11 04:23:12] 2025-10-11 04:22:27,693 | INFO     | current memory leak: 35.24 B/s (using 43 data points, chi2=0.04)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,693 | INFO     | could have reported an average CPU frequency of 2332 MHz (5 samples)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,693 | INFO     | ..............................
[2025-10-11 04:23:12] 2025-10-11 04:22:27,694 | INFO     | . Timing measurements:
[2025-10-11 04:23:12] 2025-10-11 04:22:27,694 | INFO     | . get job = 0 s
[2025-10-11 04:23:12] 2025-10-11 04:22:27,694 | INFO     | . initial setup = 1 s
[2025-10-11 04:23:12] 2025-10-11 04:22:27,694 | INFO     | . payload setup = 8 s
[2025-10-11 04:23:12] 2025-10-11 04:22:27,694 | INFO     | . stage-in = 0 s
[2025-10-11 04:23:12] 2025-10-11 04:22:27,694 | INFO     | . payload execution = 3046 s
[2025-10-11 04:23:12] 2025-10-11 04:22:27,695 | INFO     | . stage-out = 0 s
[2025-10-11 04:23:12] 2025-10-11 04:22:27,695 | INFO     | . log creation = 0 s
[2025-10-11 04:23:12] 2025-10-11 04:22:27,695 | INFO     | ..............................
[2025-10-11 04:23:12] 2025-10-11 04:22:27,796 | INFO     | 
[2025-10-11 04:23:12] 2025-10-11 04:22:27,796 | INFO     | job summary report
[2025-10-11 04:23:12] 2025-10-11 04:22:27,797 | INFO     | --------------------------------------------------
[2025-10-11 04:23:12] 2025-10-11 04:22:27,797 | INFO     | PanDA job id: 6837730789
[2025-10-11 04:23:12] 2025-10-11 04:22:27,797 | INFO     | task id: 46676269
[2025-10-11 04:23:12] 2025-10-11 04:22:27,797 | INFO     | errors: (none)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 04:23:12] 2025-10-11 04:22:27,797 | INFO     | pilot state: finished 
[2025-10-11 04:23:12] 2025-10-11 04:22:27,797 | INFO     | transexitcode: 0
[2025-10-11 04:23:12] 2025-10-11 04:22:27,797 | INFO     | exeerrorcode: 0
[2025-10-11 04:23:12] 2025-10-11 04:22:27,798 | INFO     | exeerrordiag: 
[2025-10-11 04:23:12] 2025-10-11 04:22:27,798 | INFO     | exitcode: 0
[2025-10-11 04:23:12] 2025-10-11 04:22:27,798 | INFO     | exitmsg: OK
[2025-10-11 04:23:12] 2025-10-11 04:22:27,798 | INFO     | cpuconsumptiontime: 32233 s
[2025-10-11 04:23:12] 2025-10-11 04:22:27,798 | INFO     | nevents: 400
[2025-10-11 04:23:12] 2025-10-11 04:22:27,798 | INFO     | neventsw: 0
[2025-10-11 04:23:12] 2025-10-11 04:22:27,798 | INFO     | pid: 4100316
[2025-10-11 04:23:12] 2025-10-11 04:22:27,798 | INFO     | pgrp: 4100316
[2025-10-11 04:23:12] 2025-10-11 04:22:27,799 | INFO     | corecount: 12
[2025-10-11 04:23:12] 2025-10-11 04:22:27,799 | INFO     | event service: False
[2025-10-11 04:23:12] 2025-10-11 04:22:27,799 | INFO     | sizes: {0: 2348686, 1: 2348885, 7: 2349147, 12: 2349175, 3058: 2374739, 3059: 2374738, 3060: 2383978, 3068: 2384272}
[2025-10-11 04:23:12] 2025-10-11 04:22:27,799 | INFO     | --------------------------------------------------
[2025-10-11 04:23:12] 2025-10-11 04:22:27,799 | INFO     | 
[2025-10-11 04:23:12] 2025-10-11 04:22:27,799 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2025-10-11 04:23:12] 2025-10-11 04:22:27,823 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,823 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,823 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,824 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,824 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,824 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,824 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,825 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,825 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,825 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,825 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,825 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,825 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,825 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,825 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 04:23:12] 2025-10-11 04:22:27,826 | INFO     | job 6837730789 has completed (purged errors)
[2025-10-11 04:23:12] 2025-10-11 04:22:27,826 | INFO     | overall cleanup function is called
[2025-10-11 04:23:12] 2025-10-11 04:22:28,534 | INFO     | number of running child processes to parent process 4100316: 1
[2025-10-11 04:23:12] 2025-10-11 04:22:28,534 | INFO     | maximum number of monitored processes: 6
[2025-10-11 04:23:12] 2025-10-11 04:22:28,534 | INFO     | aborting job monitoring since job object (job id=6837730789) has expired
[2025-10-11 04:23:12] 2025-10-11 04:22:28,834 | INFO     | --- collectZombieJob: --- 10, [4100316]
[2025-10-11 04:23:12] 2025-10-11 04:22:28,835 | INFO     | zombie collector waiting for pid 4100316
[2025-10-11 04:23:12] 2025-10-11 04:22:28,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 04:23:12] 2025-10-11 04:22:28,835 | INFO     | collected zombie processes
[2025-10-11 04:23:12] 2025-10-11 04:22:28,835 | INFO     | will attempt to kill all subprocesses of pid=4100316
[2025-10-11 04:23:12] 2025-10-11 04:22:29,412 | INFO     | process IDs to be killed: [4100316] (in reverse order)
[2025-10-11 04:23:12] 2025-10-11 04:22:29,676 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 04:23:12] 2025-10-11 04:22:29,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 04:23:12] 2025-10-11 04:22:29,705 | INFO     | did not find any defunct processes belonging to 4100316
[2025-10-11 04:23:12] 2025-10-11 04:22:29,734 | INFO     | did not find any defunct processes belonging to 4100316
[2025-10-11 04:23:12] 2025-10-11 04:22:29,735 | INFO     | ready for new job
[2025-10-11 04:23:12] 2025-10-11 04:22:29,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 04:23:12] 2025-10-11 04:22:29,738 | INFO     | ***************************************
[2025-10-11 04:23:12] 2025-10-11 04:22:29,738 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 04:23:12] 2025-10-11 04:22:29,738 | INFO     | ***************************************
[2025-10-11 04:23:12] 2025-10-11 04:22:29,739 | INFO     | 
[2025-10-11 04:23:12] 2025-10-11 04:22:29,777 | INFO     | architecture information:
[2025-10-11 04:23:12] 2025-10-11 04:22:29,778 | INFO     | executing command: cat /etc/os-release
[2025-10-11 04:23:12] 2025-10-11 04:22:29,799 | INFO     | cat /etc/os-release:
[2025-10-11 04:23:12] NAME="CentOS Linux"
[2025-10-11 04:23:12] VERSION="7 (Core)"
[2025-10-11 04:23:12] ID="centos"
[2025-10-11 04:23:12] ID_LIKE="rhel fedora"
[2025-10-11 04:23:12] VERSION_ID="7"
[2025-10-11 04:23:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 04:23:12] ANSI_COLOR="0;31"
[2025-10-11 04:23:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 04:23:12] HOME_URL="https://www.centos.org/"
[2025-10-11 04:23:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 04:23:12] 
[2025-10-11 04:23:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 04:23:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 04:23:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 04:23:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 04:23:12] 
[2025-10-11 04:23:12] 2025-10-11 04:22:29,800 | INFO     | ***************************************
[2025-10-11 04:23:12] 2025-10-11 04:22:30,303 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2025-10-11 04:23:12] 2025-10-11 04:22:30,331 | INFO     | sufficient remaining disk space (1725097312256 B)
[2025-10-11 04:23:12] 2025-10-11 04:22:30,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 04:23:12] 2025-10-11 04:22:30,331 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 04:23:12] 2025-10-11 04:22:30,331 | INFO     | update_server=False
[2025-10-11 04:23:12] 2025-10-11 04:22:30,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 04:23:12] 2025-10-11 04:22:30,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 04:23:12] 2025-10-11 04:22:30,332 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 04:23:12] 2025-10-11 04:22:30,332 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 04:23:12] 2025-10-11 04:22:30,333 | INFO     | aborting loop
[2025-10-11 04:23:12] 2025-10-11 04:22:30,349 | INFO     | all data control threads have been joined
[2025-10-11 04:23:12] 2025-10-11 04:22:30,566 | INFO     | all payload control threads have been joined
[2025-10-11 04:23:12] 2025-10-11 04:22:31,174 | INFO     | all job control threads have been joined
[2025-10-11 04:23:12] 2025-10-11 04:22:31,335 | INFO     | [job] retrieve thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:31,335 | INFO     | [job] job monitor thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:31,350 | INFO     | [data] control thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:31,572 | INFO     | [payload] control thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:31,915 | INFO     | [job] validate thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:32,051 | INFO     | [payload] validate_post thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:32,126 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:32,178 | INFO     | [job] control thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:32,194 | INFO     | [data] copytool_in thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:32,338 | INFO     | [data] copytool_out thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:32,344 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:32,630 | INFO     | [payload] failed_post thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:32,648 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:32,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 04:23:12] 2025-10-11 04:22:33,808 | INFO     | [job] queue monitor thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:34,338 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:22:41,122 | INFO     | job.realtimelogging is not enabled
[2025-10-11 04:23:12] 2025-10-11 04:22:42,125 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 04:23:12] 2025-10-11 04:23:01,455 | INFO     | PID=4078252 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 04:23:12] 2025-10-11 04:23:01,455 | INFO     | .. there are 17 such processes running
[2025-10-11 04:23:12] 2025-10-11 04:23:01,456 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 04:23:12] 2025-10-11 04:23:01,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 04:23:12] 2025-10-11 04:23:01,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 04:23:12] 2025-10-11 04:23:06,126 | INFO     | [monitor] cgroup control has ended
[2025-10-11 04:23:12] 2025-10-11 04:23:07,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548161926976)>', '<ExcThread(monitor, started 140547427657472)>']
[2025-10-11 04:23:12] 2025-10-11 04:23:07,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 04:23:12] 2025-10-11 04:23:07,484 | INFO     | [monitor] control thread has ended
[2025-10-11 04:23:12] 2025-10-11 04:23:12,071 | INFO     | all workflow threads have been joined
[2025-10-11 04:23:12] 2025-10-11 04:23:12,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 04:23:12] 2025-10-11 04:23:12,071 | INFO     | traces error code: 0
[2025-10-11 04:23:12] 2025-10-11 04:23:12,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 04:23:12] 2025-10-11 04:23:12,228 [wrapper] ==== pilot stdout END ====
[2025-10-11 04:23:12] 2025-10-11 04:23:12,231 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 04:23:12] 2025-10-11 04:23:12,233 [wrapper] pilotpid: 4078252
[2025-10-11 04:23:12] 2025-10-11 04:23:12,236 [wrapper] Pilot exit status: 0
[2025-10-11 04:23:12] 2025-10-11 04:23:12,248 [wrapper] pandaids: 6837730789
[2025-10-11 04:23:12] 2025-10-11 04:23:12,382 [wrapper] cleanup supervisor_pilot  229201 4078253
[2025-10-11 04:23:12] 2025-10-11 04:23:12,385 [wrapper] Test setup, not cleaning
[2025-10-11 04:23:12] 2025-10-11 04:23:12,387 [wrapper] apfmon messages muted
[2025-10-11 04:23:12] 2025-10-11 04:23:12,390 [wrapper] ==== wrapper stdout END ====
[2025-10-11 04:23:12] 2025-10-11 04:23:12,393 [wrapper] ==== wrapper stderr END ====
[2025-10-11 04:23:12]  *** Error codes and diagnostics ***
[2025-10-11 04:23:12]     "exeErrorCode": 0,
[2025-10-11 04:23:12]     "exeErrorDiag": "",
[2025-10-11 04:23:12]     "pilotErrorCode": 0,
[2025-10-11 04:23:12]     "pilotErrorDiag": "",
[2025-10-11 04:23:12]  *** Listing of results directory ***
[2025-10-11 04:23:12] total 406560
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc    557409 Oct 10 19:27 pilot3.tar.gz
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc      5112 Oct 10 19:30 queuedata.json
[2025-10-11 04:23:12] -rwx------ 1 boinc boinc     36292 Oct 10 19:30 runpilot2-wrapper.sh
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc       100 Oct 11 03:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 04:23:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 03:30 run_atlas
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc       105 Oct 11 03:30 job.xml
[2025-10-11 04:23:12] -rw-r--r-- 2 boinc boinc     15120 Oct 11 03:30 start_atlas.sh
[2025-10-11 04:23:12] drwxrwx--x 2 boinc boinc      4096 Oct 11 03:30 shared
[2025-10-11 04:23:12] -rw-r--r-- 2 boinc boinc    569682 Oct 11 03:30 input.tar.gz
[2025-10-11 04:23:12] -rw-r--r-- 2 boinc boinc 217882414 Oct 11 03:30 EVNT.46676267._001782.pool.root.1
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc         0 Oct 11 03:30 boinc_setup_complete
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc      9396 Oct 11 03:30 init_data.xml
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc         0 Oct 11 03:30 boinc_lockfile
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc      2549 Oct 11 03:30 pandaJob.out
[2025-10-11 04:23:12] -rw------- 1 boinc boinc    975509 Oct 11 03:31 agis_schedconf.cvmfs.json
[2025-10-11 04:23:12] -rw------- 1 boinc boinc   1560580 Oct 11 03:31 agis_ddmendpoints.agis.ALL.json
[2025-10-11 04:23:12] drwx------ 5 boinc boinc      4096 Oct 11 03:31 pilot3
[2025-10-11 04:23:12] -rw------- 1 boinc boinc 192865286 Oct 11 04:21 HITS.46676269._044035.pool.root.1
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc       530 Oct 11 04:21 boinc_task_state.xml
[2025-10-11 04:23:12] -rw------- 1 boinc boinc      1025 Oct 11 04:22 memory_monitor_summary.json
[2025-10-11 04:23:12] -rw------- 1 boinc boinc    368020 Oct 11 04:22 log.46676269._044035.job.log.tgz.1
[2025-10-11 04:23:12] -rw------- 1 boinc boinc      7742 Oct 11 04:22 heartbeat.json
[2025-10-11 04:23:12] -rw------- 1 boinc boinc        95 Oct 11 04:23 pilot_heartbeat.json
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc        27 Oct 11 04:23 wrapper_checkpoint.txt
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc      8192 Oct 11 04:23 boinc_mmap_file
[2025-10-11 04:23:12] -rw------- 1 boinc boinc      4899 Oct 11 04:23 pilotlog.txt
[2025-10-11 04:23:12] -rw------- 1 boinc boinc    459735 Oct 11 04:23 log.46676269._044035.job.log.1
[2025-10-11 04:23:12] -rw------- 1 boinc boinc       357 Oct 11 04:23 output.list
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc       620 Oct 11 04:23 runtime_log
[2025-10-11 04:23:12] -rw------- 1 boinc boinc    849920 Oct 11 04:23 result.tar.gz
[2025-10-11 04:23:12] -rw------- 1 boinc boinc       644 Oct 11 04:23 T2nKDmK0XR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEGeNDmrG0eXm.diag
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc      8672 Oct 11 04:23 runtime_log.err
[2025-10-11 04:23:12] -rw-r--r-- 1 boinc boinc     22185 Oct 11 04:23 stderr.txt
[2025-10-11 04:23:12] HITS file was successfully produced:
[2025-10-11 04:23:12] -rw------- 1 boinc boinc 192865286 Oct 11 04:21 shared/HITS.pool.root.1
[2025-10-11 04:23:12]  *** Contents of shared directory: ***
[2025-10-11 04:23:12] total 402540
[2025-10-11 04:23:12] -rw-r--r-- 2 boinc boinc     15120 Oct 11 03:30 start_atlas.sh
[2025-10-11 04:23:12] -rw-r--r-- 2 boinc boinc    569682 Oct 11 03:30 input.tar.gz
[2025-10-11 04:23:12] -rw-r--r-- 2 boinc boinc 217882414 Oct 11 03:30 ATLAS.root_0
[2025-10-11 04:23:12] -rw------- 1 boinc boinc 192865286 Oct 11 04:21 HITS.pool.root.1
[2025-10-11 04:23:12] -rw------- 1 boinc boinc    849920 Oct 11 04:23 result.tar.gz
04:23:13 (4070052): run_atlas exited; CPU time 32413.020080
04:23:13 (4070052): called boinc_finish(0)

</stderr_txt>
]]>

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