Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:31:12 (2715704): wrapper (7.7.26015): starting
09:31:12 (2715704): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 09:31:12] Arguments: --nthreads 4
[2025-10-12 09:31:12] Threads: 4
[2025-10-12 09:31:12] Checking for CVMFS
[2025-10-12 09:31:12] No cvmfs_config command found, will try listing directly
[2025-10-12 09:31:12] CVMFS is ok
[2025-10-12 09:31:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:31:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:31:12] Further information can be found at the LHC@home message board.
[2025-10-12 09:31:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:31:12] Checking for apptainer binary...
[2025-10-12 09:31:12] which: no apptainer in ((null))
[2025-10-12 09:31:12] apptainer is not installed, using version from CVMFS
[2025-10-12 09:31:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:31:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-10-12 09:31:12] apptainer works
[2025-10-12 09:31:12] Set ATHENA_PROC_NUMBER=4
[2025-10-12 09:31:12] Set ATHENA_CORE_NUMBER=4
[2025-10-12 09:31:12] Starting ATLAS job with PandaID=6837785859
[2025-10-12 09:31:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:20:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:20:22] 2025-10-12 10:51:11,022 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:20:22] 2025-10-12 10:51:11,022 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:20:22] 2025-10-12 10:51:11,022 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:20:22] 2025-10-12 10:51:11,026 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:20:22] 2025-10-12 10:51:11,027 | INFO     | sum of square deviations: 2370641658.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,028 | INFO     | sum of deviations: -20076557412.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,028 | INFO     | mean x: 1760260283.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,028 | INFO     | mean y: 2355148.345177665
[2025-10-12 14:20:22] 2025-10-12 10:51:11,029 | INFO     | -- intersect: 14909697433.69401
[2025-10-12 14:20:22] 2025-10-12 10:51:11,029 | INFO     | intersect: 14909697433.69401
[2025-10-12 14:20:22] 2025-10-12 10:51:11,029 | INFO     | chi2: 2.0960050759176116
[2025-10-12 14:20:22] 2025-10-12 10:51:11,030 | INFO     | sum of square deviations: 2194675568.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,031 | INFO     | sum of deviations: -8193109652.999994
[2025-10-12 14:20:22] 2025-10-12 10:51:11,031 | INFO     | mean x: 1760260130.5
[2025-10-12 14:20:22] 2025-10-12 10:51:11,031 | INFO     | mean y: 2365246.3645833335
[2025-10-12 14:20:22] 2025-10-12 10:51:11,031 | INFO     | -- intersect: 6573725714.068381
[2025-10-12 14:20:22] 2025-10-12 10:51:11,031 | INFO     | intersect: 6573725714.068381
[2025-10-12 14:20:22] 2025-10-12 10:51:11,032 | INFO     | chi2: 1.4397380985245871
[2025-10-12 14:20:22] 2025-10-12 10:51:11,032 | INFO     | current chi2=1.4397380985245871 (change=31.310371569864493 %)
[2025-10-12 14:20:22] 2025-10-12 10:51:11,032 | INFO     | sum of square deviations: 2027639878.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,034 | INFO     | sum of deviations: -7709920418.000003
[2025-10-12 14:20:22] 2025-10-12 10:51:11,034 | INFO     | mean x: 1760259978.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,034 | INFO     | mean y: 2365687.5935828877
[2025-10-12 14:20:22] 2025-10-12 10:51:11,034 | INFO     | -- intersect: 6695597800.761973
[2025-10-12 14:20:22] 2025-10-12 10:51:11,034 | INFO     | intersect: 6695597800.761973
[2025-10-12 14:20:22] 2025-10-12 10:51:11,034 | INFO     | chi2: 1.439412560378232
[2025-10-12 14:20:22] 2025-10-12 10:51:11,035 | INFO     | current chi2=1.439412560378232 (change=0.02261092810482468 %)
[2025-10-12 14:20:22] 2025-10-12 10:51:11,035 | INFO     | right removable region: 186
[2025-10-12 14:20:22] 2025-10-12 10:51:11,035 | INFO     | sum of square deviations: 2194675568.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,036 | INFO     | sum of deviations: -44357814903.499985
[2025-10-12 14:20:22] 2025-10-12 10:51:11,037 | INFO     | mean x: 1760260435.5
[2025-10-12 14:20:22] 2025-10-12 10:51:11,037 | INFO     | mean y: 2375898.2135416665
[2025-10-12 14:20:22] 2025-10-12 10:51:11,037 | INFO     | -- intersect: 35579983686.0555
[2025-10-12 14:20:22] 2025-10-12 10:51:11,037 | INFO     | intersect: 35579983686.0555
[2025-10-12 14:20:22] 2025-10-12 10:51:11,037 | INFO     | chi2: 0.7795178122509814
[2025-10-12 14:20:22] 2025-10-12 10:51:11,038 | INFO     | current chi2=0.7795178122509814 (change=62.80935474787837 %)
[2025-10-12 14:20:22] 2025-10-12 10:51:11,038 | INFO     | sum of square deviations: 2027639878.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,039 | INFO     | sum of deviations: -41937209152.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,039 | INFO     | mean x: 1760260588.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,039 | INFO     | mean y: 2373670.1550802137
[2025-10-12 14:20:22] 2025-10-12 10:51:11,040 | INFO     | -- intersect: 36409438475.86044
[2025-10-12 14:20:22] 2025-10-12 10:51:11,040 | INFO     | intersect: 36409438475.86044
[2025-10-12 14:20:22] 2025-10-12 10:51:11,040 | INFO     | chi2: 0.7770800466311414
[2025-10-12 14:20:22] 2025-10-12 10:51:11,040 | INFO     | current chi2=0.7770800466311414 (change=0.31272737858299327 %)
[2025-10-12 14:20:22] 2025-10-12 10:51:11,040 | INFO     | left removable region: 20
[2025-10-12 14:20:22] 2025-10-12 10:51:11,041 | INFO     | sum of square deviations: 1418361477.5
[2025-10-12 14:20:22] 2025-10-12 10:51:11,042 | INFO     | sum of deviations: -21499405958.0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,042 | INFO     | mean x: 1760260557.5
[2025-10-12 14:20:22] 2025-10-12 10:51:11,042 | INFO     | mean y: 2377721.3975903615
[2025-10-12 14:20:22] 2025-10-12 10:51:11,042 | INFO     | -- intersect: 26684261654.295013
[2025-10-12 14:20:22] 2025-10-12 10:51:11,042 | INFO     | intersect: 26684261654.295013
[2025-10-12 14:20:22] 2025-10-12 10:51:11,043 | INFO     | chi2: 0.09253859906033825
[2025-10-12 14:20:22] 2025-10-12 10:51:11,043 | INFO     | -- intersect: 26684261654.295013
[2025-10-12 14:20:22] 2025-10-12 10:51:11,043 | INFO     | current memory leak: -15.16 B/s (using 166 data points, chi2=0.09)
[2025-10-12 14:20:22] 2025-10-12 10:51:11,043 | INFO     | could have reported an average CPU frequency of 2602 MHz (10 samples)
[2025-10-12 14:20:22] 2025-10-12 10:51:11,044 | INFO     | ..............................
[2025-10-12 14:20:22] 2025-10-12 10:51:11,044 | INFO     | . Timing measurements:
[2025-10-12 14:20:22] 2025-10-12 10:51:11,044 | INFO     | . get job = 0 s
[2025-10-12 14:20:22] 2025-10-12 10:51:11,044 | INFO     | . initial setup = 1 s
[2025-10-12 14:20:22] 2025-10-12 10:51:11,044 | INFO     | . payload setup = 4 s
[2025-10-12 14:20:22] 2025-10-12 10:51:11,044 | INFO     | . stage-in = 0 s
[2025-10-12 14:20:22] 2025-10-12 10:51:11,044 | INFO     | . payload execution = 11961 s
[2025-10-12 14:20:22] 2025-10-12 10:51:11,044 | INFO     | . stage-out = 1 s
[2025-10-12 14:20:22] 2025-10-12 10:51:11,044 | INFO     | . log creation = 0 s
[2025-10-12 14:20:22] 2025-10-12 10:51:11,045 | INFO     | ..............................
[2025-10-12 14:20:22] 2025-10-12 10:51:11,445 | INFO     | 
[2025-10-12 14:20:22] 2025-10-12 10:51:11,445 | INFO     | job summary report
[2025-10-12 14:20:22] 2025-10-12 10:51:11,445 | INFO     | --------------------------------------------------
[2025-10-12 14:20:22] 2025-10-12 10:51:11,445 | INFO     | PanDA job id: 6837785859
[2025-10-12 14:20:22] 2025-10-12 10:51:11,445 | INFO     | task id: 46676269
[2025-10-12 14:20:22] 2025-10-12 10:51:11,445 | INFO     | errors: (none)
[2025-10-12 14:20:22] 2025-10-12 10:51:11,446 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:20:22] 2025-10-12 10:51:11,446 | INFO     | pilot state: finished 
[2025-10-12 14:20:22] 2025-10-12 10:51:11,446 | INFO     | transexitcode: 0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,446 | INFO     | exeerrorcode: 0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,446 | INFO     | exeerrordiag: 
[2025-10-12 14:20:22] 2025-10-12 10:51:11,446 | INFO     | exitcode: 0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,446 | INFO     | exitmsg: OK
[2025-10-12 14:20:22] 2025-10-12 10:51:11,446 | INFO     | cpuconsumptiontime: 46275 s
[2025-10-12 14:20:22] 2025-10-12 10:51:11,447 | INFO     | nevents: 400
[2025-10-12 14:20:22] 2025-10-12 10:51:11,447 | INFO     | neventsw: 0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,447 | INFO     | pid: 2737325
[2025-10-12 14:20:22] 2025-10-12 10:51:11,447 | INFO     | pgrp: 2737325
[2025-10-12 14:20:22] 2025-10-12 10:51:11,447 | INFO     | corecount: 4
[2025-10-12 14:20:22] 2025-10-12 10:51:11,447 | INFO     | event service: False
[2025-10-12 14:20:22] 2025-10-12 10:51:11,447 | INFO     | sizes: {0: 2348868, 4: 2349130, 11: 2349158, 11970: 2378774, 11971: 2387850, 11975: 2387988}
[2025-10-12 14:20:22] 2025-10-12 10:51:11,447 | INFO     | --------------------------------------------------
[2025-10-12 14:20:22] 2025-10-12 10:51:11,448 | INFO     | 
[2025-10-12 14:20:22] 2025-10-12 10:51:11,448 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-12 14:20:22] 2025-10-12 10:51:11,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,468 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:20:22] 2025-10-12 10:51:11,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,468 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:20:22] 2025-10-12 10:51:11,468 | INFO     | job 6837785859 has completed (purged errors)
[2025-10-12 14:20:22] 2025-10-12 10:51:11,468 | INFO     | overall cleanup function is called
[2025-10-12 14:20:22] 2025-10-12 10:51:12,476 | INFO     | --- collectZombieJob: --- 10, [2737325]
[2025-10-12 14:20:22] 2025-10-12 10:51:12,476 | INFO     | zombie collector waiting for pid 2737325
[2025-10-12 14:20:22] 2025-10-12 10:51:12,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:20:22] 2025-10-12 10:51:12,477 | INFO     | collected zombie processes
[2025-10-12 14:20:22] 2025-10-12 10:51:12,477 | INFO     | will attempt to kill all subprocesses of pid=2737325
[2025-10-12 14:20:22] 2025-10-12 10:51:12,782 | INFO     | process IDs to be killed: [2737325] (in reverse order)
[2025-10-12 14:20:22] 2025-10-12 10:51:12,856 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:20:22] 2025-10-12 10:51:12,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:20:22] 2025-10-12 10:51:12,865 | INFO     | did not find any defunct processes belonging to 2737325
[2025-10-12 14:20:22] 2025-10-12 10:51:12,872 | INFO     | did not find any defunct processes belonging to 2737325
[2025-10-12 14:20:22] 2025-10-12 10:51:12,873 | INFO     | ready for new job
[2025-10-12 14:20:22] 2025-10-12 10:51:12,873 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:20:22] 2025-10-12 10:51:12,875 | INFO     | ***************************************
[2025-10-12 14:20:22] 2025-10-12 10:51:12,875 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:20:22] 2025-10-12 10:51:12,875 | INFO     | ***************************************
[2025-10-12 14:20:22] 2025-10-12 10:51:12,876 | INFO     | 
[2025-10-12 14:20:22] 2025-10-12 10:51:12,878 | INFO     | architecture information:
[2025-10-12 14:20:22] 2025-10-12 10:51:12,879 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:20:22] 2025-10-12 10:51:12,892 | INFO     | cat /etc/os-release:
[2025-10-12 14:20:22] NAME="CentOS Linux"
[2025-10-12 14:20:22] VERSION="7 (Core)"
[2025-10-12 14:20:22] ID="centos"
[2025-10-12 14:20:22] ID_LIKE="rhel fedora"
[2025-10-12 14:20:22] VERSION_ID="7"
[2025-10-12 14:20:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:20:22] ANSI_COLOR="0;31"
[2025-10-12 14:20:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:20:22] HOME_URL="https://www.centos.org/"
[2025-10-12 14:20:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:20:22] 
[2025-10-12 14:20:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:20:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:20:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:20:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:20:22] 
[2025-10-12 14:20:22] 2025-10-12 10:51:12,893 | INFO     | ***************************************
[2025-10-12 14:20:22] 2025-10-12 10:51:13,396 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-12 14:20:22] 2025-10-12 10:51:13,411 | INFO     | sufficient remaining disk space (1677671268352 B)
[2025-10-12 14:20:22] 2025-10-12 10:51:13,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:20:22] 2025-10-12 10:51:13,412 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:20:22] 2025-10-12 10:51:13,412 | INFO     | update_server=False
[2025-10-12 14:20:22] 2025-10-12 10:51:13,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:20:22] 2025-10-12 10:51:13,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:20:22] 2025-10-12 10:51:13,448 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:20:22] 2025-10-12 10:51:14,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:20:22] 2025-10-12 10:51:14,068 | INFO     | aborting loop
[2025-10-12 14:20:22] 2025-10-12 10:51:14,314 | INFO     | all data control threads have been joined
[2025-10-12 14:20:22] 2025-10-12 10:51:14,316 | INFO     | all payload control threads have been joined
[2025-10-12 14:20:22] 2025-10-12 10:51:14,417 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:14,534 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:14,551 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:14,596 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:14,718 | INFO     | all job control threads have been joined
[2025-10-12 14:20:22] 2025-10-12 10:51:14,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:15,074 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:15,164 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:15,320 | INFO     | [data] control thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:15,321 | INFO     | [payload] control thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:15,418 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:15,494 | INFO     | [job] validate thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:15,495 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:15,724 | INFO     | [job] control thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:15,909 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:16,159 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:20:22] 2025-10-12 10:51:17,164 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:17,454 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:20:22] 2025-10-12 10:51:39,767 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:20:22] 2025-10-12 10:51:40,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22735699134272)>', '<ExcThread(monitor, started 22735453374208)>']
[2025-10-12 14:20:22] 2025-10-12 10:51:43,272 | INFO     | PID=2722428 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:20:22] 2025-10-12 10:51:43,272 | INFO     | .. there are 2 such processes running
[2025-10-12 14:20:22] 2025-10-12 10:51:43,273 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:20:22] 2025-10-12 10:51:43,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:20:22] 2025-10-12 10:51:43,274 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:20:22] 2025-10-12 10:51:43,274 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:20:22] 2025-10-12 10:51:43,274 | INFO     | [monitor] control thread has ended
[2025-10-12 14:20:22] 2025-10-12 10:51:45,798 | INFO     | all workflow threads have been joined
[2025-10-12 14:20:22] 2025-10-12 10:51:45,798 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:20:22] 2025-10-12 10:51:45,798 | INFO     | traces error code: 0
[2025-10-12 14:20:22] 2025-10-12 10:51:45,799 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:20:22] 2025-10-12 10:51:45,905 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:20:22] 2025-10-12 10:51:45,908 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:20:22] 2025-10-12 10:51:45,910 [wrapper] pilotpid: 2722428
[2025-10-12 14:20:22] 2025-10-12 10:51:45,912 [wrapper] Pilot exit status: 0
[2025-10-12 14:20:22] 2025-10-12 10:51:45,920 [wrapper] pandaids: 6837785859
[2025-10-12 14:20:22] 2025-10-12 10:51:45,971 [wrapper] cleanup supervisor_pilot 2890357 2722429
[2025-10-12 14:20:22] 2025-10-12 10:51:45,973 [wrapper] Test setup, not cleaning
[2025-10-12 14:20:22] 2025-10-12 10:51:45,975 [wrapper] apfmon messages muted
[2025-10-12 14:20:22] 2025-10-12 10:51:45,978 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:20:22] 2025-10-12 10:51:45,980 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:20:22]  *** Error codes and diagnostics ***
[2025-10-12 14:20:22]     "exeErrorCode": 0,
[2025-10-12 14:20:22]     "exeErrorDiag": "",
[2025-10-12 14:20:22]     "pilotErrorCode": 0,
[2025-10-12 14:20:22]     "pilotErrorDiag": "",
[2025-10-12 14:20:22]  *** Listing of results directory ***
[2025-10-12 14:20:22] total 422668
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc    557409 Oct 10 23:22 pilot3.tar.gz
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc      5112 Oct 10 23:27 queuedata.json
[2025-10-12 14:20:22] -rwx------ 1 boinc boinc     36292 Oct 10 23:29 runpilot2-wrapper.sh
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc       100 Oct 12 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:20:22] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 09:31 run_atlas
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc       105 Oct 12 09:31 job.xml
[2025-10-12 14:20:22] -rw-r--r-- 2 boinc boinc 222417706 Oct 12 09:31 EVNT.46676267._001837.pool.root.1
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc      6421 Oct 12 09:31 init_data.xml
[2025-10-12 14:20:22] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:31 start_atlas.sh
[2025-10-12 14:20:22] drwxrwx--x 2 boinc boinc      4096 Oct 12 09:31 shared
[2025-10-12 14:20:22] -rw-r--r-- 2 boinc boinc    569684 Oct 12 09:31 input.tar.gz
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc         0 Oct 12 09:31 boinc_lockfile
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc      2550 Oct 12 09:31 pandaJob.out
[2025-10-12 14:20:22] -rw------- 1 boinc boinc    975520 Oct 12 09:31 agis_schedconf.cvmfs.json
[2025-10-12 14:20:22] drwx------ 5 boinc boinc      4096 Oct 12 09:31 pilot3
[2025-10-12 14:20:22] -rw------- 1 boinc boinc 202327186 Oct 12 12:50 HITS.46676269._045416.pool.root.1
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc       528 Oct 12 12:50 boinc_task_state.xml
[2025-10-12 14:20:22] -rw------- 1 boinc boinc      1038 Oct 12 12:51 memory_monitor_summary.json
[2025-10-12 14:20:22] -rw------- 1 boinc boinc   1560580 Oct 12 12:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:20:22] -rw------- 1 boinc boinc    363346 Oct 12 12:51 log.46676269._045416.job.log.tgz.1
[2025-10-12 14:20:22] -rw------- 1 boinc boinc      7840 Oct 12 12:51 heartbeat.json
[2025-10-12 14:20:22] -rw------- 1 boinc boinc        95 Oct 12 12:51 pilot_heartbeat.json
[2025-10-12 14:20:22] -rw------- 1 boinc boinc      4834 Oct 12 12:51 pilotlog.txt
[2025-10-12 14:20:22] -rw------- 1 boinc boinc   1712690 Oct 12 12:51 log.46676269._045416.job.log.1
[2025-10-12 14:20:22] -rw------- 1 boinc boinc       357 Oct 12 12:51 output.list
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc       620 Oct 12 12:51 runtime_log
[2025-10-12 14:20:22] -rw------- 1 boinc boinc   2099200 Oct 12 12:51 result.tar.gz
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc      9070 Oct 12 12:51 runtime_log.err
[2025-10-12 14:20:22] -rw------- 1 boinc boinc       664 Oct 12 12:51 lpEMDmrqZR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMcQMDmZe6jxn.diag
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:20 wrapper_checkpoint.txt
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:20 boinc_mmap_file
[2025-10-12 14:20:22] -rw-r--r-- 1 boinc boinc     20646 Oct 12 14:20 stderr.txt
[2025-10-12 14:20:22] HITS file was successfully produced:
[2025-10-12 14:20:22] -rw------- 1 boinc boinc 202327186 Oct 12 12:50 shared/HITS.pool.root.1
[2025-10-12 14:20:22]  *** Contents of shared directory: ***
[2025-10-12 14:20:22] total 417432
[2025-10-12 14:20:22] -rw-r--r-- 2 boinc boinc 222417706 Oct 12 09:31 ATLAS.root_0
[2025-10-12 14:20:22] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:31 start_atlas.sh
[2025-10-12 14:20:22] -rw-r--r-- 2 boinc boinc    569684 Oct 12 09:31 input.tar.gz
[2025-10-12 14:20:22] -rw------- 1 boinc boinc 202327186 Oct 12 12:50 HITS.pool.root.1
[2025-10-12 14:20:22] -rw------- 1 boinc boinc   2099200 Oct 12 12:51 result.tar.gz
14:20:24 (2715704): run_atlas exited; CPU time 46675.434194
14:20:24 (2715704): called boinc_finish(0)

</stderr_txt>
]]>

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