Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:50 (1303572): wrapper (7.7.26015): starting
00:01:50 (1303572): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:01:50] Arguments: --nthreads 9
[2025-10-11 00:01:50] Threads: 9
[2025-10-11 00:01:50] Checking for CVMFS
[2025-10-11 00:01:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:01:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:01:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:01:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:01:53] 2.13.2.0 2356181 127316 259852 151571 1 398 30685302 32935936 26169 16776704 0 117669934 99.722 89475389 30424 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:01:53] CVMFS is ok
[2025-10-11 00:01:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:01:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:01:53] Further information can be found at the LHC@home message board.
[2025-10-11 00:01:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:01:53] Checking for apptainer binary...
[2025-10-11 00:01:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:01:53] Running /usr/bin/apptainer --version
[2025-10-11 00:01:53] apptainer version 1.4.3-1.el9
[2025-10-11 00:01:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:01:54] c-6-2.aglt2.org
[2025-10-11 00:01:54] apptainer works
[2025-10-11 00:01:54] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:01:54] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:01:54] Starting ATLAS job with PandaID=6837785888
[2025-10-11 00:01:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 13:36:36]  *** The last 200 lines of the pilot log: ***
[2025-10-11 13:36:36] 2025-10-11 17:36:01,915 | INFO     | time since job start (48791s) is within the limit (172800.0s)
[2025-10-11 13:36:36] 2025-10-11 17:36:02,552 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 13:36:36] 2025-10-11 17:36:02,589 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.035175000002
[2025-10-11 13:36:36] 2025-10-11 17:36:02,643 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837785888/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 13:36:36] 2025-10-11 17:36:02,644 | INFO     | extracted standard info from prmon json
[2025-10-11 13:36:36] 2025-10-11 17:36:02,644 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 13:36:36] 2025-10-11 17:36:02,644 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 13:36:36] 2025-10-11 17:36:02,644 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 13:36:36] 2025-10-11 17:36:02,656 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 13:36:36] 2025-10-11 17:36:02,702 | INFO     | fitting pss+swap vs Time
[2025-10-11 13:36:36] 2025-10-11 17:36:02,704 | INFO     | sum of square deviations: 157560258344.49142
[2025-10-11 13:36:36] 2025-10-11 17:36:02,722 | INFO     | sum of deviations: 652615419494.5621
[2025-10-11 13:36:36] 2025-10-11 17:36:02,722 | INFO     | mean x: 1760179772.7719297
[2025-10-11 13:36:36] 2025-10-11 17:36:02,722 | INFO     | mean y: 2322867.1679197997
[2025-10-11 13:36:36] 2025-10-11 17:36:02,722 | INFO     | -- intersect: -7288351017.624915
[2025-10-11 13:36:36] 2025-10-11 17:36:02,722 | INFO     | intersect: -7288351017.624915
[2025-10-11 13:36:36] 2025-10-11 17:36:02,723 | INFO     | chi2: 4.42199963733102
[2025-10-11 13:36:36] 2025-10-11 17:36:02,725 | INFO     | sum of square deviations: 154617057474.96597
[2025-10-11 13:36:36] 2025-10-11 17:36:02,817 | INFO     | sum of deviations: 701328474373.8555
[2025-10-11 13:36:36] 2025-10-11 17:36:02,817 | INFO     | mean x: 1760179620.2774274
[2025-10-11 13:36:36] 2025-10-11 17:36:02,817 | INFO     | mean y: 2325379.2824716265
[2025-10-11 13:36:36] 2025-10-11 17:36:02,817 | INFO     | -- intersect: -7981684327.492554
[2025-10-11 13:36:36] 2025-10-11 17:36:02,817 | INFO     | intersect: -7981684327.492554
[2025-10-11 13:36:36] 2025-10-11 17:36:02,819 | INFO     | chi2: 3.7308042086563
[2025-10-11 13:36:36] 2025-10-11 17:36:02,819 | INFO     | current chi2=3.7308042086563 (change=15.630834133037252 %)
[2025-10-11 13:36:36] 2025-10-11 17:36:02,819 | INFO     | right removable region: 792
[2025-10-11 13:36:36] 2025-10-11 17:36:02,820 | INFO     | sum of square deviations: 154616535433.851
[2025-10-11 13:36:36] 2025-10-11 17:36:02,964 | INFO     | sum of deviations: 478568147601.4287
[2025-10-11 13:36:36] 2025-10-11 17:36:02,971 | INFO     | mean x: 1760179925.2799497
[2025-10-11 13:36:36] 2025-10-11 17:36:02,971 | INFO     | mean y: 2331872.7187894075
[2025-10-11 13:36:36] 2025-10-11 17:36:02,971 | INFO     | -- intersect: -5445766184.340786
[2025-10-11 13:36:36] 2025-10-11 17:36:02,971 | INFO     | intersect: -5445766184.340786
[2025-10-11 13:36:36] 2025-10-11 17:36:02,972 | INFO     | chi2: 2.2834609357041384
[2025-10-11 13:36:36] 2025-10-11 17:36:02,973 | INFO     | current chi2=2.2834609357041384 (change=48.361349548134214 %)
[2025-10-11 13:36:36] 2025-10-11 17:36:02,974 | INFO     | sum of square deviations: 151709696935.6078
[2025-10-11 13:36:36] 2025-10-11 17:36:03,025 | INFO     | sum of deviations: 393925486301.4276
[2025-10-11 13:36:36] 2025-10-11 17:36:03,025 | INFO     | mean x: 1760180077.7880712
[2025-10-11 13:36:36] 2025-10-11 17:36:03,025 | INFO     | mean y: 2336313.5774111673
[2025-10-11 13:36:36] 2025-10-11 17:36:03,026 | INFO     | -- intersect: -4568101879.408047
[2025-10-11 13:36:36] 2025-10-11 17:36:03,026 | INFO     | intersect: -4568101879.408047
[2025-10-11 13:36:36] 2025-10-11 17:36:03,027 | INFO     | chi2: 1.8828105189034334
[2025-10-11 13:36:36] 2025-10-11 17:36:03,027 | INFO     | current chi2=1.8828105189034334 (change=17.545753051262892 %)
[2025-10-11 13:36:36] 2025-10-11 17:36:03,027 | INFO     | left removable region: 20
[2025-10-11 13:36:36] 2025-10-11 17:36:03,038 | INFO     | sum of square deviations: 142653616907.00717
[2025-10-11 13:36:36] 2025-10-11 17:36:03,081 | INFO     | sum of deviations: 289352995966.4943
[2025-10-11 13:36:36] 2025-10-11 17:36:03,082 | INFO     | mean x: 1760180199.8095856
[2025-10-11 13:36:36] 2025-10-11 17:36:03,082 | INFO     | mean y: 2347362.6360103628
[2025-10-11 13:36:36] 2025-10-11 17:36:03,082 | INFO     | -- intersect: -3567933050.1474714
[2025-10-11 13:36:36] 2025-10-11 17:36:03,082 | INFO     | intersect: -3567933050.1474714
[2025-10-11 13:36:36] 2025-10-11 17:36:03,083 | INFO     | chi2: 0.4879570181420537
[2025-10-11 13:36:36] 2025-10-11 17:36:03,084 | INFO     | -- intersect: -3567933050.1474714
[2025-10-11 13:36:36] 2025-10-11 17:36:03,084 | INFO     | current memory leak: 2.03 B/s (using 772 data points, chi2=0.49)
[2025-10-11 13:36:36] 2025-10-11 17:36:03,085 | INFO     | could have reported an average CPU frequency of 2600 MHz (30 samples)
[2025-10-11 13:36:36] 2025-10-11 17:36:03,085 | INFO     | ..............................
[2025-10-11 13:36:36] 2025-10-11 17:36:03,085 | INFO     | . Timing measurements:
[2025-10-11 13:36:36] 2025-10-11 17:36:03,085 | INFO     | . get job = 0 s
[2025-10-11 13:36:36] 2025-10-11 17:36:03,085 | INFO     | . initial setup = 7 s
[2025-10-11 13:36:36] 2025-10-11 17:36:03,086 | INFO     | . payload setup = 21 s
[2025-10-11 13:36:36] 2025-10-11 17:36:03,086 | INFO     | . stage-in = 0 s
[2025-10-11 13:36:36] 2025-10-11 17:36:03,086 | INFO     | . payload execution = 48685 s
[2025-10-11 13:36:36] 2025-10-11 17:36:03,086 | INFO     | . stage-out = 5 s
[2025-10-11 13:36:36] 2025-10-11 17:36:03,086 | INFO     | . log creation = 0 s
[2025-10-11 13:36:36] 2025-10-11 17:36:03,086 | INFO     | ..............................
[2025-10-11 13:36:36] 2025-10-11 17:36:03,274 | INFO     | 
[2025-10-11 13:36:36] 2025-10-11 17:36:03,274 | INFO     | job summary report
[2025-10-11 13:36:36] 2025-10-11 17:36:03,274 | INFO     | --------------------------------------------------
[2025-10-11 13:36:36] 2025-10-11 17:36:03,275 | INFO     | PanDA job id: 6837785888
[2025-10-11 13:36:36] 2025-10-11 17:36:03,275 | INFO     | task id: 46676269
[2025-10-11 13:36:36] 2025-10-11 17:36:03,275 | INFO     | errors: (none)
[2025-10-11 13:36:36] 2025-10-11 17:36:03,275 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 13:36:36] 2025-10-11 17:36:03,275 | INFO     | pilot state: finished 
[2025-10-11 13:36:36] 2025-10-11 17:36:03,275 | INFO     | transexitcode: 0
[2025-10-11 13:36:36] 2025-10-11 17:36:03,275 | INFO     | exeerrorcode: 0
[2025-10-11 13:36:36] 2025-10-11 17:36:03,275 | INFO     | exeerrordiag: 
[2025-10-11 13:36:36] 2025-10-11 17:36:03,275 | INFO     | exitcode: 0
[2025-10-11 13:36:36] 2025-10-11 17:36:03,275 | INFO     | exitmsg: OK
[2025-10-11 13:36:36] 2025-10-11 17:36:03,276 | INFO     | cpuconsumptiontime: 53055 s
[2025-10-11 13:36:36] 2025-10-11 17:36:03,276 | INFO     | nevents: 400
[2025-10-11 13:36:36] 2025-10-11 17:36:03,276 | INFO     | neventsw: 0
[2025-10-11 13:36:36] 2025-10-11 17:36:03,276 | INFO     | pid: 1338999
[2025-10-11 13:36:36] 2025-10-11 17:36:03,276 | INFO     | pgrp: 1338999
[2025-10-11 13:36:36] 2025-10-11 17:36:03,276 | INFO     | corecount: 9
[2025-10-11 13:36:36] 2025-10-11 17:36:03,276 | INFO     | event service: False
[2025-10-11 13:36:36] 2025-10-11 17:36:03,276 | INFO     | sizes: {0: 2348629, 1: 2348713, 2: 2348912, 3: 2348912, 14: 2348940, 22: 2349230, 25: 2349386, 48711: 2395382, 48712: 2395381, 48717: 2404435, 48718: 2404491, 4874
[2025-10-11 13:36:36] 2025-10-11 17:36:03,276 | INFO     | --------------------------------------------------
[2025-10-11 13:36:36] 2025-10-11 17:36:03,277 | INFO     | 
[2025-10-11 13:36:36] 2025-10-11 17:36:03,277 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 13:36:36] 2025-10-11 17:36:03,302 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,302 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,302 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,302 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 13:36:36] 2025-10-11 17:36:03,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 13:36:36] 2025-10-11 17:36:03,304 | INFO     | job 6837785888 has completed (purged errors)
[2025-10-11 13:36:36] 2025-10-11 17:36:03,305 | INFO     | overall cleanup function is called
[2025-10-11 13:36:36] 2025-10-11 17:36:04,324 | INFO     | --- collectZombieJob: --- 10, [1338999]
[2025-10-11 13:36:36] 2025-10-11 17:36:04,325 | INFO     | zombie collector waiting for pid 1338999
[2025-10-11 13:36:36] 2025-10-11 17:36:04,325 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 13:36:36] 2025-10-11 17:36:04,325 | INFO     | collected zombie processes
[2025-10-11 13:36:36] 2025-10-11 17:36:04,325 | INFO     | will attempt to kill all subprocesses of pid=1338999
[2025-10-11 13:36:36] 2025-10-11 17:36:05,610 | INFO     | process IDs to be killed: [1338999] (in reverse order)
[2025-10-11 13:36:36] 2025-10-11 17:36:05,996 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 13:36:36] 2025-10-11 17:36:05,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 13:36:36] 2025-10-11 17:36:06,019 | INFO     | did not find any defunct processes belonging to 1338999
[2025-10-11 13:36:36] 2025-10-11 17:36:06,036 | INFO     | did not find any defunct processes belonging to 1338999
[2025-10-11 13:36:36] 2025-10-11 17:36:06,036 | INFO     | ready for new job
[2025-10-11 13:36:36] 2025-10-11 17:36:06,036 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 13:36:36] 2025-10-11 17:36:06,064 | INFO     | ***************************************
[2025-10-11 13:36:36] 2025-10-11 17:36:06,064 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 13:36:36] 2025-10-11 17:36:06,064 | INFO     | ***************************************
[2025-10-11 13:36:36] 2025-10-11 17:36:06,064 | INFO     | 
[2025-10-11 13:36:36] 2025-10-11 17:36:06,080 | INFO     | architecture information:
[2025-10-11 13:36:36] 2025-10-11 17:36:06,101 | INFO     | executing command: cat /etc/os-release
[2025-10-11 13:36:36] 2025-10-11 17:36:06,187 | INFO     | cat /etc/os-release:
[2025-10-11 13:36:36] NAME="CentOS Linux"
[2025-10-11 13:36:36] VERSION="7 (Core)"
[2025-10-11 13:36:36] ID="centos"
[2025-10-11 13:36:36] ID_LIKE="rhel fedora"
[2025-10-11 13:36:36] VERSION_ID="7"
[2025-10-11 13:36:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 13:36:36] ANSI_COLOR="0;31"
[2025-10-11 13:36:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 13:36:36] HOME_URL="https://www.centos.org/"
[2025-10-11 13:36:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 13:36:36] 
[2025-10-11 13:36:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 13:36:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 13:36:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 13:36:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 13:36:36] 
[2025-10-11 13:36:36] 2025-10-11 17:36:06,187 | INFO     | ***************************************
[2025-10-11 13:36:36] 2025-10-11 17:36:06,691 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 13:36:36] 2025-10-11 17:36:06,753 | INFO     | sufficient remaining disk space (75654758400 B)
[2025-10-11 13:36:36] 2025-10-11 17:36:06,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 13:36:36] 2025-10-11 17:36:06,754 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 13:36:36] 2025-10-11 17:36:06,754 | INFO     | update_server=False
[2025-10-11 13:36:36] 2025-10-11 17:36:06,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 13:36:36] 2025-10-11 17:36:06,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 13:36:36] 2025-10-11 17:36:07,008 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-11 13:36:36] 2025-10-11 17:36:07,009 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-11 13:36:36] 2025-10-11 17:36:07,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:36:36] 2025-10-11 17:36:07,009 | INFO     | will abort loop
[2025-10-11 13:36:36] 2025-10-11 17:36:07,247 | INFO     | all payload control threads have been joined
[2025-10-11 13:36:36] 2025-10-11 17:36:07,760 | INFO     | [job] retrieve thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:07,793 | INFO     | all data control threads have been joined
[2025-10-11 13:36:36] 2025-10-11 17:36:07,909 | INFO     | all job control threads have been joined
[2025-10-11 13:36:36] 2025-10-11 17:36:07,949 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:07,962 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:08,016 | INFO     | [job] job monitor thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:08,177 | INFO     | [payload] validate_post thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:08,244 | INFO     | [job] validate thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:08,253 | INFO     | [payload] control thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:08,293 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 13:36:36] 2025-10-11 17:36:08,747 | INFO     | [payload] failed_post thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:08,765 | INFO     | [data] copytool_out thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:08,772 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:08,799 | INFO     | [data] control thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:08,860 | INFO     | [data] copytool_in thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:08,914 | INFO     | [job] control thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:09,077 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:09,299 | INFO     | [job] queue monitor thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:09,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 13:36:36] 2025-10-11 17:36:13,506 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 13:36:36] 2025-10-11 17:36:17,764 | INFO     | [monitor] cgroup control has ended
[2025-10-11 13:36:36] 2025-10-11 17:36:18,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139737104967488)>', '<ExcThread(monitor, started 139736467359488)>']
[2025-10-11 13:36:36] 2025-10-11 17:36:23,371 | INFO     | all workflow threads have been joined
[2025-10-11 13:36:36] 2025-10-11 17:36:23,394 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 13:36:36] 2025-10-11 17:36:23,395 | INFO     | traces error code: 0
[2025-10-11 13:36:36] 2025-10-11 17:36:23,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 13:36:36] 2025-10-11 17:36:35,883 | INFO     | PID=1313547 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 13:36:36] 2025-10-11 17:36:35,884 | INFO     | .. there are 40 such processes running
[2025-10-11 13:36:36] 2025-10-11 17:36:35,884 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 13:36:36] 2025-10-11 17:36:35,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 13:36:36] 2025-10-11 17:36:35,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 13:36:36] 2025-10-11 17:36:35,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 13:36:36] 2025-10-11 17:36:35,885 | INFO     | [monitor] control thread has ended
[2025-10-11 13:36:36] 2025-10-11 17:36:36,042 [wrapper] ==== pilot stdout END ====
[2025-10-11 13:36:36] 2025-10-11 17:36:36,044 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 13:36:36] 2025-10-11 17:36:36,047 [wrapper] pilotpid: 1313547
[2025-10-11 13:36:36] 2025-10-11 17:36:36,049 [wrapper] Pilot exit status: 0
[2025-10-11 13:36:36] 2025-10-11 17:36:36,161 [wrapper] pandaids: 6837785888
[2025-10-11 13:36:36] 2025-10-11 17:36:36,298 [wrapper] cleanup supervisor_pilot 3669675 1313548
[2025-10-11 13:36:36] 2025-10-11 17:36:36,303 [wrapper] Test setup, not cleaning
[2025-10-11 13:36:36] 2025-10-11 17:36:36,305 [wrapper] apfmon messages muted
[2025-10-11 13:36:36] 2025-10-11 17:36:36,312 [wrapper] ==== wrapper stdout END ====
[2025-10-11 13:36:36] 2025-10-11 17:36:36,314 [wrapper] ==== wrapper stderr END ====
[2025-10-11 13:36:36]  *** Error codes and diagnostics ***
[2025-10-11 13:36:36]     "exeErrorCode": 0,
[2025-10-11 13:36:36]     "exeErrorDiag": "",
[2025-10-11 13:36:36]     "pilotErrorCode": 0,
[2025-10-11 13:36:36]     "pilotErrorDiag": "",
[2025-10-11 13:36:36]  *** Listing of results directory ***
[2025-10-11 13:36:36] total 423208
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 17:22 pilot3.tar.gz
[2025-10-11 13:36:36] -rwx------. 1 boincer umatlas     36292 Oct 10 17:27 runpilot2-wrapper.sh
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 17:27 queuedata.json
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 13:36:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:01 run_atlas
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:01 job.xml
[2025-10-11 13:36:36] -rw-r--r--. 2 boincer umatlas 222431762 Oct 11 00:01 EVNT.46676267._001838.pool.root.1
[2025-10-11 13:36:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:01 start_atlas.sh
[2025-10-11 13:36:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:01 shared
[2025-10-11 13:36:36] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 00:01 input.tar.gz
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:01 boinc_lockfile
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 00:01 pandaJob.out
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas    975509 Oct 11 00:02 agis_schedconf.cvmfs.json
[2025-10-11 13:36:36] drwx------. 5 boincer umatlas      4096 Oct 11 00:02 pilot3
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas      6657 Oct 11 13:28 init_data.xml
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas 193182855 Oct 11 13:34 HITS.46676269._045445.pool.root.1
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas       531 Oct 11 13:34 boinc_task_state.xml
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas      1041 Oct 11 13:35 memory_monitor_summary.json
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas   1560580 Oct 11 13:35 agis_ddmendpoints.agis.ALL.json
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas    911219 Oct 11 13:35 log.46676269._045445.job.log.tgz.1
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas        95 Oct 11 13:36 pilot_heartbeat.json
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas      7821 Oct 11 13:36 heartbeat.json
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 13:36 boinc_mmap_file
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas        28 Oct 11 13:36 wrapper_checkpoint.txt
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas       823 Oct 11 13:36 pilotlog.txt
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas   6017334 Oct 11 13:36 log.46676269._045445.job.log.1
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas       357 Oct 11 13:36 output.list
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas       620 Oct 11 13:36 runtime_log
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas   6942720 Oct 11 13:36 result.tar.gz
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas      8689 Oct 11 13:36 runtime_log.err
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas       656 Oct 11 13:36 eFFNDmipZR8n9Rq4apOajLDm4fhM0noT9bVof3QYDm9bQMDmwFof8m.diag
[2025-10-11 13:36:36] -rw-r--r--. 1 boincer umatlas     21222 Oct 11 13:36 stderr.txt
[2025-10-11 13:36:36] HITS file was successfully produced:
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas 193182855 Oct 11 13:34 shared/HITS.pool.root.1
[2025-10-11 13:36:36]  *** Contents of shared directory: ***
[2025-10-11 13:36:36] total 413236
[2025-10-11 13:36:36] -rw-r--r--. 2 boincer umatlas 222431762 Oct 11 00:01 ATLAS.root_0
[2025-10-11 13:36:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:01 start_atlas.sh
[2025-10-11 13:36:36] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 00:01 input.tar.gz
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas 193182855 Oct 11 13:34 HITS.pool.root.1
[2025-10-11 13:36:36] -rw-------. 1 boincer umatlas   6942720 Oct 11 13:36 result.tar.gz
13:36:37 (1303572): run_atlas exited; CPU time 55254.259648
13:36:37 (1303572): called boinc_finish(0)

</stderr_txt>
]]>

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