Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:58 (1014468): wrapper (7.7.26015): starting
19:12:58 (1014468): wrapper: running run_atlas (--nthreads 6)
[2025-10-11 19:12:58] Arguments: --nthreads 6
[2025-10-11 19:12:58] Threads: 6
[2025-10-11 19:12:58] Checking for CVMFS
[2025-10-11 19:12:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 19:12:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 19:12:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 19:12:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 19:12:59] 2.11.5.0 3385007 2834 91592 151580 1 57 13244126 20971520 929 130560 0 5656227 99.996 93534 13 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-11 19:12:59] CVMFS is ok
[2025-10-11 19:12:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 19:12:59] Checking for apptainer binary...
[2025-10-11 19:12:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 19:12:59] Running /usr/bin/apptainer --version
[2025-10-11 19:12:59] apptainer version 1.3.6-1.el9
[2025-10-11 19:12:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 19:12:59] testio006
[2025-10-11 19:12:59] apptainer works
[2025-10-11 19:12:59] Set ATHENA_PROC_NUMBER=6
[2025-10-11 19:12:59] Set ATHENA_CORE_NUMBER=6
[2025-10-11 19:12:59] Starting ATLAS job with PandaID=6837667902
[2025-10-11 19:12:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 20:28:36]  *** The last 200 lines of the pilot log: ***
[2025-10-11 20:28:36] 2025-10-11 11:27:39,468 | INFO     | time since job start (4470s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:27:41,474 | INFO     | time since job start (4472s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:27:41,737 | INFO     | monitor loop #352: job 0:6837667902 is in state 'finished'
[2025-10-11 20:28:36] 2025-10-11 11:27:41,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:28:36] 2025-10-11 11:27:43,480 | INFO     | time since job start (4474s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:27:44,240 | INFO     | monitor loop #353: job 0:6837667902 is in state 'finished'
[2025-10-11 20:28:36] 2025-10-11 11:27:44,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:28:36] 2025-10-11 11:27:45,482 | INFO     | time since job start (4476s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:27:46,743 | INFO     | monitor loop #354: job 0:6837667902 is in state 'finished'
[2025-10-11 20:28:36] 2025-10-11 11:27:46,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:28:36] 2025-10-11 11:27:47,487 | INFO     | time since job start (4478s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:27:49,246 | INFO     | monitor loop #355: job 0:6837667902 is in state 'finished'
[2025-10-11 20:28:36] 2025-10-11 11:27:49,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:28:36] 2025-10-11 11:27:49,493 | INFO     | time since job start (4480s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:27:51,498 | INFO     | time since job start (4482s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:27:51,749 | INFO     | monitor loop #356: job 0:6837667902 is in state 'finished'
[2025-10-11 20:28:36] 2025-10-11 11:27:51,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:28:36] 2025-10-11 11:27:53,504 | INFO     | time since job start (4484s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:27:54,252 | INFO     | monitor loop #357: job 0:6837667902 is in state 'finished'
[2025-10-11 20:28:36] 2025-10-11 11:27:54,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:28:36] 2025-10-11 11:27:55,509 | INFO     | time since job start (4486s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:27:56,755 | INFO     | monitor loop #358: job 0:6837667902 is in state 'finished'
[2025-10-11 20:28:36] 2025-10-11 11:27:56,755 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:28:36] 2025-10-11 11:27:57,514 | INFO     | time since job start (4488s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:27:57,515 | INFO     | 4492s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-11 20:28:36] 2025-10-11 11:27:59,258 | INFO     | monitor loop #359: job 0:6837667902 is in state 'finished'
[2025-10-11 20:28:36] 2025-10-11 11:27:59,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:28:36] 2025-10-11 11:27:59,520 | INFO     | time since job start (4490s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:28:00,615 | INFO     | PID=1018267 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:28:36] 2025-10-11 11:28:00,615 | INFO     | .. there are 2 such processes running
[2025-10-11 20:28:36] 2025-10-11 11:28:01,615 | INFO     | time since job start (4492s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:28:01,761 | INFO     | monitor loop #360: job 0:6837667902 is in state 'finished'
[2025-10-11 20:28:36] 2025-10-11 11:28:01,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 20:28:36] 2025-10-11 11:28:03,620 | INFO     | time since job start (4494s) is within the limit (172800.0s)
[2025-10-11 20:28:36] 2025-10-11 11:28:04,173 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 20:28:36] 2025-10-11 11:28:04,174 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4007.3540624999996
[2025-10-11 20:28:36] 2025-10-11 11:28:04,176 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6837667902/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 20:28:36] 2025-10-11 11:28:04,177 | INFO     | extracted standard info from prmon json
[2025-10-11 20:28:36] 2025-10-11 11:28:04,177 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 20:28:36] 2025-10-11 11:28:04,177 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 20:28:36] 2025-10-11 11:28:04,177 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 20:28:36] 2025-10-11 11:28:04,177 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 20:28:36] 2025-10-11 11:28:04,178 | INFO     | fitting pss+swap vs Time
[2025-10-11 20:28:36] 2025-10-11 11:28:04,178 | INFO     | sum of square deviations: 89127252.5
[2025-10-11 20:28:36] 2025-10-11 11:28:04,178 | INFO     | sum of deviations: -2897902020.5
[2025-10-11 20:28:36] 2025-10-11 11:28:04,178 | INFO     | mean x: 1760179898.5
[2025-10-11 20:28:36] 2025-10-11 11:28:04,178 | INFO     | mean y: 2550970.6515151514
[2025-10-11 20:28:36] 2025-10-11 11:28:04,178 | INFO     | -- intersect: 57233406194.272766
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | intersect: 57233406194.272766
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | chi2: 0.052204749954682876
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | -- intersect: 57233406194.272766
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | current memory leak: -32.51 B/s (using 66 data points, chi2=0.05)
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | could have reported an average CPU frequency of 3996 MHz (6 samples)
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | ..............................
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | . Timing measurements:
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | . get job = 0 s
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | . initial setup = 5 s
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | . payload setup = 3 s
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | . stage-in = 0 s
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | . payload execution = 4396 s
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | . stage-out = 0 s
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | . log creation = 0 s
[2025-10-11 20:28:36] 2025-10-11 11:28:04,179 | INFO     | ..............................
[2025-10-11 20:28:36] 2025-10-11 11:28:04,231 | INFO     | 
[2025-10-11 20:28:36] 2025-10-11 11:28:04,231 | INFO     | job summary report
[2025-10-11 20:28:36] 2025-10-11 11:28:04,231 | INFO     | --------------------------------------------------
[2025-10-11 20:28:36] 2025-10-11 11:28:04,231 | INFO     | PanDA job id: 6837667902
[2025-10-11 20:28:36] 2025-10-11 11:28:04,231 | INFO     | task id: 46676269
[2025-10-11 20:28:36] 2025-10-11 11:28:04,231 | INFO     | errors: (none)
[2025-10-11 20:28:36] 2025-10-11 11:28:04,231 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 20:28:36] 2025-10-11 11:28:04,231 | INFO     | pilot state: finished 
[2025-10-11 20:28:36] 2025-10-11 11:28:04,231 | INFO     | transexitcode: 0
[2025-10-11 20:28:36] 2025-10-11 11:28:04,231 | INFO     | exeerrorcode: 0
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | exeerrordiag: 
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | exitcode: 0
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | exitmsg: OK
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | cpuconsumptiontime: 24087 s
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | nevents: 400
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | neventsw: 0
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | pid: 1025046
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | pgrp: 1025046
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | corecount: 6
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | event service: False
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 4403: 2375288, 4404: 2384286, 4405: 2384342, 4480: 2384664}
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | --------------------------------------------------
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | 
[2025-10-11 20:28:36] 2025-10-11 11:28:04,232 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,246 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,247 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 20:28:36] 2025-10-11 11:28:04,247 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,247 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 20:28:36] 2025-10-11 11:28:04,247 | INFO     | job 6837667902 has completed (purged errors)
[2025-10-11 20:28:36] 2025-10-11 11:28:04,247 | INFO     | overall cleanup function is called
[2025-10-11 20:28:36] 2025-10-11 11:28:05,253 | INFO     | --- collectZombieJob: --- 10, [1025046]
[2025-10-11 20:28:36] 2025-10-11 11:28:05,254 | INFO     | zombie collector waiting for pid 1025046
[2025-10-11 20:28:36] 2025-10-11 11:28:05,254 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 20:28:36] 2025-10-11 11:28:05,254 | INFO     | collected zombie processes
[2025-10-11 20:28:36] 2025-10-11 11:28:05,254 | INFO     | will attempt to kill all subprocesses of pid=1025046
[2025-10-11 20:28:36] 2025-10-11 11:28:05,318 | INFO     | process IDs to be killed: [1025046] (in reverse order)
[2025-10-11 20:28:36] 2025-10-11 11:28:05,355 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 20:28:36] 2025-10-11 11:28:05,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 20:28:36] 2025-10-11 11:28:05,357 | INFO     | did not find any defunct processes belonging to 1025046
[2025-10-11 20:28:36] 2025-10-11 11:28:05,359 | INFO     | did not find any defunct processes belonging to 1025046
[2025-10-11 20:28:36] 2025-10-11 11:28:05,360 | INFO     | ready for new job
[2025-10-11 20:28:36] 2025-10-11 11:28:05,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 20:28:36] 2025-10-11 11:28:05,360 | INFO     | ***************************************
[2025-10-11 20:28:36] 2025-10-11 11:28:05,360 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 20:28:36] 2025-10-11 11:28:05,360 | INFO     | ***************************************
[2025-10-11 20:28:36] 2025-10-11 11:28:05,361 | INFO     | 
[2025-10-11 20:28:36] 2025-10-11 11:28:05,361 | INFO     | architecture information:
[2025-10-11 20:28:36] 2025-10-11 11:28:05,361 | INFO     | executing command: cat /etc/os-release
[2025-10-11 20:28:36] 2025-10-11 11:28:05,370 | INFO     | cat /etc/os-release:
[2025-10-11 20:28:36] NAME="CentOS Linux"
[2025-10-11 20:28:36] VERSION="7 (Core)"
[2025-10-11 20:28:36] ID="centos"
[2025-10-11 20:28:36] ID_LIKE="rhel fedora"
[2025-10-11 20:28:36] VERSION_ID="7"
[2025-10-11 20:28:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 20:28:36] ANSI_COLOR="0;31"
[2025-10-11 20:28:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 20:28:36] HOME_URL="https://www.centos.org/"
[2025-10-11 20:28:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 20:28:36] 
[2025-10-11 20:28:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 20:28:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 20:28:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 20:28:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 20:28:36] 
[2025-10-11 20:28:36] 2025-10-11 11:28:05,370 | INFO     | ***************************************
[2025-10-11 20:28:36] 2025-10-11 11:28:05,873 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-11 20:28:36] 2025-10-11 11:28:05,884 | INFO     | sufficient remaining disk space (83744522240 B)
[2025-10-11 20:28:36] 2025-10-11 11:28:05,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 20:28:36] 2025-10-11 11:28:05,884 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 20:28:36] 2025-10-11 11:28:05,884 | INFO     | update_server=False
[2025-10-11 20:28:36] 2025-10-11 11:28:05,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 20:28:36] 2025-10-11 11:28:05,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:28:36] 2025-10-11 11:28:05,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 20:28:36] 2025-10-11 11:28:05,885 | INFO     | aborting loop
[2025-10-11 20:28:36] 2025-10-11 11:28:06,088 | INFO     | all job control threads have been joined
[2025-10-11 20:28:36] 2025-10-11 11:28:06,180 | INFO     | all payload control threads have been joined
[2025-10-11 20:28:36] 2025-10-11 11:28:06,306 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 20:28:36] 2025-10-11 11:28:06,699 | INFO     | all data control threads have been joined
[2025-10-11 20:28:36] 2025-10-11 11:28:06,889 | INFO     | [job] retrieve thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:06,890 | INFO     | [job] queue monitor thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:06,891 | INFO     | [job] job monitor thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:07,093 | INFO     | [job] control thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:07,186 | INFO     | [payload] control thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:07,201 | INFO     | [payload] validate_post thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:07,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 20:28:36] 2025-10-11 11:28:07,663 | INFO     | [job] validate thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:07,678 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:07,704 | INFO     | [data] control thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:07,898 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:08,013 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:08,015 | INFO     | [data] copytool_in thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:08,200 | INFO     | [payload] failed_post thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:08,311 | INFO     | [data] copytool_out thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:11,216 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:14,257 [wrapper] supervise_pilot (15 min periods counter: 6)
[2025-10-11 20:28:36] 2025-10-11 11:28:15,694 | INFO     | [monitor] cgroup control has ended
[2025-10-11 20:28:36] 2025-10-11 11:28:16,729 | INFO     | job.realtimelogging is not enabled
[2025-10-11 20:28:36] 2025-10-11 11:28:17,734 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 20:28:36] 2025-10-11 11:28:19,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139793108797248)>', '<ExcThread(monitor, started 139792251610880)>']
[2025-10-11 20:28:36] 2025-10-11 11:28:24,130 | INFO     | all workflow threads have been joined
[2025-10-11 20:28:36] 2025-10-11 11:28:24,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 20:28:36] 2025-10-11 11:28:24,130 | INFO     | traces error code: 0
[2025-10-11 20:28:36] 2025-10-11 11:28:24,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 20:28:36] 2025-10-11 11:28:36,786 | INFO     | PID=1018267 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 20:28:36] 2025-10-11 11:28:36,786 | INFO     | .. there are 2 such processes running
[2025-10-11 20:28:36] 2025-10-11 11:28:36,786 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 20:28:36] 2025-10-11 11:28:36,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 20:28:36] 2025-10-11 11:28:36,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 20:28:36] 2025-10-11 11:28:36,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 20:28:36] 2025-10-11 11:28:36,787 | INFO     | [monitor] control thread has ended
[2025-10-11 20:28:36] 2025-10-11 11:28:36,859 [wrapper] ==== pilot stdout END ====
[2025-10-11 20:28:36] 2025-10-11 11:28:36,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 20:28:36] 2025-10-11 11:28:36,863 [wrapper] pilotpid: 1018267
[2025-10-11 20:28:36] 2025-10-11 11:28:36,864 [wrapper] Pilot exit status: 0
[2025-10-11 20:28:36] 2025-10-11 11:28:36,871 [wrapper] pandaids: 6837667902
[2025-10-11 20:28:36] 2025-10-11 11:28:36,896 [wrapper] cleanup supervisor_pilot 1064124 1018268
[2025-10-11 20:28:36] 2025-10-11 11:28:36,898 [wrapper] Test setup, not cleaning
[2025-10-11 20:28:36] 2025-10-11 11:28:36,899 [wrapper] apfmon messages muted
[2025-10-11 20:28:36] 2025-10-11 11:28:36,901 [wrapper] ==== wrapper stdout END ====
[2025-10-11 20:28:36] 2025-10-11 11:28:36,903 [wrapper] ==== wrapper stderr END ====
[2025-10-11 20:28:36]  *** Error codes and diagnostics ***
[2025-10-11 20:28:36]     "exeErrorCode": 0,
[2025-10-11 20:28:36]     "exeErrorDiag": "",
[2025-10-11 20:28:36]     "pilotErrorCode": 0,
[2025-10-11 20:28:36]     "pilotErrorDiag": "",
[2025-10-11 20:28:36]  *** Listing of results directory ***
[2025-10-11 20:28:36] total 408372
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc    557409 Oct 11 00:29 pilot3.tar.gz
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc      5112 Oct 11 00:42 queuedata.json
[2025-10-11 20:28:36] -rwx------. 1 boinc boinc     36292 Oct 11 00:42 runpilot2-wrapper.sh
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc       100 Oct 11 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 20:28:36] -rwxr-xr-x. 1 boinc boinc      7986 Oct 11 19:12 run_atlas
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc       105 Oct 11 19:12 job.xml
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc      9465 Oct 11 19:12 init_data.xml
[2025-10-11 20:28:36] -rw-r--r--. 2 boinc boinc 218981138 Oct 11 19:12 EVNT.46676267._001665.pool.root.1
[2025-10-11 20:28:36] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:12 start_atlas.sh
[2025-10-11 20:28:36] drwxrwx--x. 2 boinc boinc        68 Oct 11 19:12 shared
[2025-10-11 20:28:36] -rw-r--r--. 2 boinc boinc    569678 Oct 11 19:12 input.tar.gz
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc         0 Oct 11 19:12 boinc_lockfile
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc      2550 Oct 11 19:12 pandaJob.out
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc    975525 Oct 11 19:13 agis_schedconf.cvmfs.json
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc   1560580 Oct 11 19:13 agis_ddmendpoints.agis.ALL.json
[2025-10-11 20:28:36] drwx------. 5 boinc boinc      4096 Oct 11 19:13 pilot3
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc 193375499 Oct 11 20:26 HITS.46676269._041074.pool.root.1
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc       529 Oct 11 20:26 boinc_task_state.xml
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc      1019 Oct 11 20:26 memory_monitor_summary.json
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc    294414 Oct 11 20:26 log.46676269._041074.job.log.tgz.1
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc        95 Oct 11 20:27 pilot_heartbeat.json
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc      7754 Oct 11 20:28 heartbeat.json
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc      8192 Oct 11 20:28 boinc_mmap_file
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc        27 Oct 11 20:28 wrapper_checkpoint.txt
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc       822 Oct 11 20:28 pilotlog.txt
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc    668265 Oct 11 20:28 log.46676269._041074.job.log.1
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc       357 Oct 11 20:28 output.list
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc       620 Oct 11 20:28 runtime_log
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc    983040 Oct 11 20:28 result.tar.gz
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc       641 Oct 11 20:28 WLVLDmlRUR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLldNDmHqdW7n.diag
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc      8661 Oct 11 20:28 runtime_log.err
[2025-10-11 20:28:36] -rw-r--r--. 1 boinc boinc     21917 Oct 11 20:28 stderr.txt
[2025-10-11 20:28:36] HITS file was successfully produced:
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc 193375499 Oct 11 20:26 shared/HITS.pool.root.1
[2025-10-11 20:28:36]  *** Contents of shared directory: ***
[2025-10-11 20:28:36] total 404232
[2025-10-11 20:28:36] -rw-r--r--. 2 boinc boinc 218981138 Oct 11 19:12 ATLAS.root_0
[2025-10-11 20:28:36] -rw-r--r--. 2 boinc boinc     15120 Oct 11 19:12 start_atlas.sh
[2025-10-11 20:28:36] -rw-r--r--. 2 boinc boinc    569678 Oct 11 19:12 input.tar.gz
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc 193375499 Oct 11 20:26 HITS.pool.root.1
[2025-10-11 20:28:36] -rw-------. 1 boinc boinc    983040 Oct 11 20:28 result.tar.gz
20:28:38 (1014468): run_atlas exited; CPU time 24123.552361
20:28:38 (1014468): called boinc_finish(0)

</stderr_txt>
]]>

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