Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:48:31 (1732126): wrapper (7.7.26015): starting
23:48:31 (1732126): wrapper: running run_atlas (--nthreads 11)
[2025-10-10 23:48:31] Arguments: --nthreads 11
[2025-10-10 23:48:31] Threads: 11
[2025-10-10 23:48:31] Checking for CVMFS
[2025-10-10 23:48:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 23:48:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 23:48:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 23:48:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 23:48:32] 2.13.2.0 3608313 127284 273428 151571 1 453 30256128 32935937 20385 16776704 0 176229165 99.614 192076502 29410 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 23:48:32] CVMFS is ok
[2025-10-10 23:48:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 23:48:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 23:48:32] Further information can be found at the LHC@home message board.
[2025-10-10 23:48:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 23:48:32] Checking for apptainer binary...
[2025-10-10 23:48:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 23:48:32] Running /usr/bin/apptainer --version
[2025-10-10 23:48:32] apptainer version 1.4.3-1.el9
[2025-10-10 23:48:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 23:48:32] c6-6-39-3.aglt2.org
[2025-10-10 23:48:32] apptainer works
[2025-10-10 23:48:32] Set ATHENA_PROC_NUMBER=11
[2025-10-10 23:48:32] Set ATHENA_CORE_NUMBER=11
[2025-10-10 23:48:32] Starting ATLAS job with PandaID=6837785813
[2025-10-10 23:48:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
03:09:55 (2761597): wrapper (7.7.26015): starting
03:09:55 (2761597): wrapper: running run_atlas (--nthreads 8)
[2025-10-11 03:09:55] Arguments: --nthreads 8
[2025-10-11 03:09:55] Threads: 8
[2025-10-11 03:09:55] This job has been restarted, cleaning up previous attempt
[2025-10-11 03:09:55] Checking for CVMFS
[2025-10-11 03:09:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 03:09:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 03:09:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 03:09:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 03:09:57] 2.13.2.0 3608313 127486 290564 151575 3 652 22785834 32935936 25324 16776704 0 176954767 99.614 192898195 29393 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 03:09:57] CVMFS is ok
[2025-10-11 03:09:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 03:09:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 03:09:58] Further information can be found at the LHC@home message board.
[2025-10-11 03:09:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 03:09:58] Checking for apptainer binary...
[2025-10-11 03:09:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 03:09:58] Running /usr/bin/apptainer --version
[2025-10-11 03:09:58] apptainer version 1.4.3-1.el9
[2025-10-11 03:09:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 03:09:58] c6-6-39-3.aglt2.org
[2025-10-11 03:09:58] apptainer works
[2025-10-11 03:09:59] Set ATHENA_PROC_NUMBER=8
[2025-10-11 03:09:59] Set ATHENA_CORE_NUMBER=8
[2025-10-11 03:09:59] Starting ATLAS job with PandaID=6837785813
[2025-10-11 03:09:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 11:10:53]  *** The last 200 lines of the pilot log: ***
[2025-10-11 11:10:53] 2025-10-11 15:09:53,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 11:10:53] 2025-10-11 15:09:53,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 11:10:53] 2025-10-11 15:09:53,919 | INFO     | fitting pss+swap vs Time
[2025-10-11 11:10:53] 2025-10-11 15:09:53,920 | INFO     | sum of square deviations: 31987192697.245228
[2025-10-11 11:10:53] 2025-10-11 15:09:53,928 | INFO     | sum of deviations: 103035207340.18762
[2025-10-11 11:10:53] 2025-10-11 15:09:53,929 | INFO     | mean x: 1760181031.6460555
[2025-10-11 11:10:53] 2025-10-11 15:09:53,929 | INFO     | mean y: 2197678.398720682
[2025-10-11 11:10:53] 2025-10-11 15:09:53,929 | INFO     | -- intersect: -5667590829.410396
[2025-10-11 11:10:53] 2025-10-11 15:09:53,929 | INFO     | intersect: -5667590829.410396
[2025-10-11 11:10:53] 2025-10-11 15:09:53,930 | INFO     | chi2: 2.5108357020765375
[2025-10-11 11:10:53] 2025-10-11 15:09:53,930 | INFO     | sum of square deviations: 30975061480.13583
[2025-10-11 11:10:53] 2025-10-11 15:09:53,935 | INFO     | sum of deviations: 107040911236.83192
[2025-10-11 11:10:53] 2025-10-11 15:09:53,935 | INFO     | mean x: 1760180879.1530173
[2025-10-11 11:10:53] 2025-10-11 15:09:53,935 | INFO     | mean y: 2198282.7629310344
[2025-10-11 11:10:53] 2025-10-11 15:09:53,935 | INFO     | -- intersect: -6080481016.098648
[2025-10-11 11:10:53] 2025-10-11 15:09:53,936 | INFO     | intersect: -6080481016.098648
[2025-10-11 11:10:53] 2025-10-11 15:09:53,936 | INFO     | chi2: 2.503606251094983
[2025-10-11 11:10:53] 2025-10-11 15:09:53,936 | INFO     | current chi2=2.503606251094983 (change=0.2879300694814678 %)
[2025-10-11 11:10:53] 2025-10-11 15:09:53,936 | INFO     | right removable region: 463
[2025-10-11 11:10:53] 2025-10-11 15:09:53,937 | INFO     | sum of square deviations: 30974876650.135807
[2025-10-11 11:10:53] 2025-10-11 15:09:53,941 | INFO     | sum of deviations: 7848100487.823275
[2025-10-11 11:10:53] 2025-10-11 15:09:53,942 | INFO     | mean x: 1760181184.1530173
[2025-10-11 11:10:53] 2025-10-11 15:09:53,942 | INFO     | mean y: 2211985.3405172415
[2025-10-11 11:10:53] 2025-10-11 15:09:53,942 | INFO     | -- intersect: -443764893.4713013
[2025-10-11 11:10:53] 2025-10-11 15:09:53,942 | INFO     | intersect: -443764893.4713013
[2025-10-11 11:10:53] 2025-10-11 15:09:53,943 | INFO     | chi2: 0.3448116978102749
[2025-10-11 11:10:53] 2025-10-11 15:09:53,943 | INFO     | current chi2=0.3448116978102749 (change=86.26705452988799 %)
[2025-10-11 11:10:53] 2025-10-11 15:09:53,943 | INFO     | sum of square deviations: 29984142402.980415
[2025-10-11 11:10:53] 2025-10-11 15:09:53,948 | INFO     | sum of deviations: -18643855450.849678
[2025-10-11 11:10:53] 2025-10-11 15:09:53,949 | INFO     | mean x: 1760181336.6601307
[2025-10-11 11:10:53] 2025-10-11 15:09:53,949 | INFO     | mean y: 2216065.8278867104
[2025-10-11 11:10:53] 2025-10-11 15:09:53,949 | INFO     | -- intersect: 1096680131.7640495
[2025-10-11 11:10:53] 2025-10-11 15:09:53,949 | INFO     | intersect: 1096680131.7640495
[2025-10-11 11:10:53] 2025-10-11 15:09:53,949 | INFO     | chi2: 0.1914534405043582
[2025-10-11 11:10:53] 2025-10-11 15:09:53,950 | INFO     | current chi2=0.1914534405043582 (change=44.475943907882936 %)
[2025-10-11 11:10:53] 2025-10-11 15:09:53,950 | INFO     | sum of square deviations: 29014813757.938377
[2025-10-11 11:10:53] 2025-10-11 15:09:53,954 | INFO     | sum of deviations: -27935002425.163036
[2025-10-11 11:10:53] 2025-10-11 15:09:53,955 | INFO     | mean x: 1760181489.1629956
[2025-10-11 11:10:53] 2025-10-11 15:09:53,955 | INFO     | mean y: 2217519.002202643
[2025-10-11 11:10:53] 2025-10-11 15:09:53,955 | INFO     | -- intersect: 1696892335.0706809
[2025-10-11 11:10:53] 2025-10-11 15:09:53,955 | INFO     | intersect: 1696892335.0706809
[2025-10-11 11:10:53] 2025-10-11 15:09:53,956 | INFO     | chi2: 0.1497414843447386
[2025-10-11 11:10:53] 2025-10-11 15:09:53,956 | INFO     | current chi2=0.1497414843447386 (change=21.786997428583724 %)
[2025-10-11 11:10:53] 2025-10-11 15:09:53,956 | INFO     | left removable region: 30
[2025-10-11 11:10:53] 2025-10-11 15:09:53,956 | INFO     | sum of square deviations: 25171722334.734398
[2025-10-11 11:10:53] 2025-10-11 15:09:53,961 | INFO     | sum of deviations: -17767065701.15242
[2025-10-11 11:10:53] 2025-10-11 15:09:53,961 | INFO     | mean x: 1760181763.6766744
[2025-10-11 11:10:53] 2025-10-11 15:09:53,961 | INFO     | mean y: 2217390.727482679
[2025-10-11 11:10:53] 2025-10-11 15:09:53,961 | INFO     | -- intersect: 1244614101.820228
[2025-10-11 11:10:53] 2025-10-11 15:09:53,961 | INFO     | intersect: 1244614101.820228
[2025-10-11 11:10:53] 2025-10-11 15:09:53,962 | INFO     | chi2: 0.13777055751321277
[2025-10-11 11:10:53] 2025-10-11 15:09:53,962 | INFO     | -- intersect: 1244614101.820228
[2025-10-11 11:10:53] 2025-10-11 15:09:53,962 | INFO     | current memory leak: -0.71 B/s (using 433 data points, chi2=0.14)
[2025-10-11 11:10:53] 2025-10-11 15:09:53,963 | INFO     | could have reported an average CPU frequency of 2934 MHz (19 samples)
[2025-10-11 11:10:53] 2025-10-11 15:09:53,963 | INFO     | ..............................
[2025-10-11 11:10:53] 2025-10-11 15:09:53,963 | INFO     | . Timing measurements:
[2025-10-11 11:10:53] 2025-10-11 15:09:53,963 | INFO     | . get job = 1 s
[2025-10-11 11:10:53] 2025-10-11 15:09:53,963 | INFO     | . initial setup = 5 s
[2025-10-11 11:10:53] 2025-10-11 15:09:53,964 | INFO     | . payload setup = 28 s
[2025-10-11 11:10:53] 2025-10-11 15:09:53,964 | INFO     | . stage-in = 0 s
[2025-10-11 11:10:53] 2025-10-11 15:09:53,964 | INFO     | . payload execution = 28629 s
[2025-10-11 11:10:53] 2025-10-11 15:09:53,964 | INFO     | . stage-out = 5 s
[2025-10-11 11:10:53] 2025-10-11 15:09:53,964 | INFO     | . log creation = 0 s
[2025-10-11 11:10:53] 2025-10-11 15:09:53,964 | INFO     | ..............................
[2025-10-11 11:10:53] 2025-10-11 15:09:54,656 | INFO     | 
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | job summary report
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | --------------------------------------------------
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | PanDA job id: 6837785813
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | task id: 46676269
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | errors: (none)
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | pilot state: finished 
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | transexitcode: 0
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | exeerrorcode: 0
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | exeerrordiag: 
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | exitcode: 0
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | exitmsg: OK
[2025-10-11 11:10:53] 2025-10-11 15:09:54,657 | INFO     | cpuconsumptiontime: 43138 s
[2025-10-11 11:10:53] 2025-10-11 15:09:54,658 | INFO     | nevents: 400
[2025-10-11 11:10:53] 2025-10-11 15:09:54,658 | INFO     | neventsw: 0
[2025-10-11 11:10:53] 2025-10-11 15:09:54,658 | INFO     | pid: 2801276
[2025-10-11 11:10:53] 2025-10-11 15:09:54,658 | INFO     | pgrp: 2801276
[2025-10-11 11:10:53] 2025-10-11 15:09:54,658 | INFO     | corecount: 8
[2025-10-11 11:10:53] 2025-10-11 15:09:54,658 | INFO     | event service: False
[2025-10-11 11:10:53] 2025-10-11 15:09:54,658 | INFO     | sizes: {0: 2348629, 1: 2348713, 2: 2348912, 13: 2348912, 21: 2349230, 24: 2349258, 28662: 2386163, 28669: 2395217, 28696: 2395355}
[2025-10-11 11:10:53] 2025-10-11 15:09:54,658 | INFO     | --------------------------------------------------
[2025-10-11 11:10:53] 2025-10-11 15:09:54,658 | INFO     | 
[2025-10-11 11:10:53] 2025-10-11 15:09:54,658 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,998 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 11:10:53] 2025-10-11 15:09:54,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,998 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 11:10:53] 2025-10-11 15:09:54,998 | INFO     | job 6837785813 has completed (purged errors)
[2025-10-11 11:10:53] 2025-10-11 15:09:54,998 | INFO     | overall cleanup function is called
[2025-10-11 11:10:53] 2025-10-11 15:09:56,007 | INFO     | --- collectZombieJob: --- 10, [2801276]
[2025-10-11 11:10:53] 2025-10-11 15:09:56,007 | INFO     | zombie collector waiting for pid 2801276
[2025-10-11 11:10:53] 2025-10-11 15:09:56,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 11:10:53] 2025-10-11 15:09:56,008 | INFO     | collected zombie processes
[2025-10-11 11:10:53] 2025-10-11 15:09:56,008 | INFO     | will attempt to kill all subprocesses of pid=2801276
[2025-10-11 11:10:53] 2025-10-11 15:09:56,628 | INFO     | process IDs to be killed: [2801276] (in reverse order)
[2025-10-11 11:10:53] 2025-10-11 15:09:56,884 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 11:10:53] 2025-10-11 15:09:56,885 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 11:10:53] 2025-10-11 15:09:56,930 | INFO     | did not find any defunct processes belonging to 2801276
[2025-10-11 11:10:53] 2025-10-11 15:09:56,972 | INFO     | did not find any defunct processes belonging to 2801276
[2025-10-11 11:10:53] 2025-10-11 15:09:56,972 | INFO     | ready for new job
[2025-10-11 11:10:53] 2025-10-11 15:09:56,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 11:10:53] 2025-10-11 15:09:56,975 | INFO     | ***************************************
[2025-10-11 11:10:53] 2025-10-11 15:09:56,975 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 11:10:53] 2025-10-11 15:09:56,975 | INFO     | ***************************************
[2025-10-11 11:10:53] 2025-10-11 15:09:56,975 | INFO     | 
[2025-10-11 11:10:53] 2025-10-11 15:09:56,995 | INFO     | architecture information:
[2025-10-11 11:10:53] 2025-10-11 15:09:57,005 | INFO     | executing command: cat /etc/os-release
[2025-10-11 11:10:53] 2025-10-11 15:09:57,070 | INFO     | cat /etc/os-release:
[2025-10-11 11:10:53] NAME="CentOS Linux"
[2025-10-11 11:10:53] VERSION="7 (Core)"
[2025-10-11 11:10:53] ID="centos"
[2025-10-11 11:10:53] ID_LIKE="rhel fedora"
[2025-10-11 11:10:53] VERSION_ID="7"
[2025-10-11 11:10:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 11:10:53] ANSI_COLOR="0;31"
[2025-10-11 11:10:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 11:10:53] HOME_URL="https://www.centos.org/"
[2025-10-11 11:10:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 11:10:53] 
[2025-10-11 11:10:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 11:10:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 11:10:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 11:10:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 11:10:53] 
[2025-10-11 11:10:53] 2025-10-11 15:09:57,070 | INFO     | ***************************************
[2025-10-11 11:10:53] 2025-10-11 15:09:57,574 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-11 11:10:53] 2025-10-11 15:09:57,705 | INFO     | sufficient remaining disk space (74405904384 B)
[2025-10-11 11:10:53] 2025-10-11 15:09:57,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 11:10:53] 2025-10-11 15:09:57,706 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 11:10:53] 2025-10-11 15:09:57,706 | INFO     | update_server=False
[2025-10-11 11:10:53] 2025-10-11 15:09:57,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 11:10:53] 2025-10-11 15:09:57,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 11:10:53] 2025-10-11 15:09:58,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:10:53] 2025-10-11 15:09:58,338 | INFO     | aborting loop
[2025-10-11 11:10:53] 2025-10-11 15:09:58,357 | INFO     | all job control threads have been joined
[2025-10-11 11:10:53] 2025-10-11 15:09:58,567 | INFO     | all data control threads have been joined
[2025-10-11 11:10:53] 2025-10-11 15:09:58,712 | INFO     | [job] retrieve thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:58,718 | INFO     | [payload] validate_post thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:58,746 | INFO     | all payload control threads have been joined
[2025-10-11 11:10:53] 2025-10-11 15:09:58,754 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:58,765 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:59,021 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:59,127 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:59,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 11:10:53] 2025-10-11 15:09:59,343 | INFO     | [job] job monitor thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:59,363 | INFO     | [job] control thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:59,593 | INFO     | [data] control thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:59,676 | INFO     | [job] validate thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:59,712 | INFO     | [data] copytool_out thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:59,750 | INFO     | [data] copytool_in thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:09:59,752 | INFO     | [payload] control thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:10:00,014 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 11:10:53] 2025-10-11 15:10:00,278 | INFO     | [job] queue monitor thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:10:00,305 | INFO     | [payload] failed_post thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:10:04,034 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 11:10:53] 2025-10-11 15:10:28,019 | INFO     | PID=2778390 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 11:10:53] 2025-10-11 15:10:28,020 | INFO     | .. there are 41 such processes running
[2025-10-11 11:10:53] 2025-10-11 15:10:28,020 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 11:10:53] 2025-10-11 15:10:28,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 11:10:53] 2025-10-11 15:10:28,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 11:10:53] 2025-10-11 15:10:46,436 | INFO     | [monitor] cgroup control has ended
[2025-10-11 11:10:53] 2025-10-11 15:10:47,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957750986560)>', '<ExcThread(monitor, started 139956676720384)>']
[2025-10-11 11:10:53] 2025-10-11 15:10:48,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 11:10:53] 2025-10-11 15:10:48,142 | INFO     | [monitor] control thread has ended
[2025-10-11 11:10:53] 2025-10-11 15:10:51,244 [wrapper] supervise_pilot (15 min periods counter: 33)
[2025-10-11 11:10:53] 2025-10-11 15:10:52,207 | INFO     | all workflow threads have been joined
[2025-10-11 11:10:53] 2025-10-11 15:10:52,208 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 11:10:53] 2025-10-11 15:10:52,210 | INFO     | traces error code: 0
[2025-10-11 11:10:53] 2025-10-11 15:10:52,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 11:10:53] 2025-10-11 15:10:52,874 [wrapper] ==== pilot stdout END ====
[2025-10-11 11:10:53] 2025-10-11 15:10:52,895 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 11:10:53] 2025-10-11 15:10:52,945 [wrapper] pilotpid: 2778390
[2025-10-11 11:10:53] 2025-10-11 15:10:52,969 [wrapper] Pilot exit status: 0
[2025-10-11 11:10:53] 2025-10-11 15:10:53,052 [wrapper] pandaids: 6837785813 6837785813
[2025-10-11 11:10:53] 2025-10-11 15:10:53,158 [wrapper] cleanup supervisor_pilot  683449 2778391
[2025-10-11 11:10:53] 2025-10-11 15:10:53,161 [wrapper] Test setup, not cleaning
[2025-10-11 11:10:53] 2025-10-11 15:10:53,164 [wrapper] apfmon messages muted
[2025-10-11 11:10:53] 2025-10-11 15:10:53,167 [wrapper] ==== wrapper stdout END ====
[2025-10-11 11:10:53] 2025-10-11 15:10:53,169 [wrapper] ==== wrapper stderr END ====
[2025-10-11 11:10:53]  *** Error codes and diagnostics ***
[2025-10-11 11:10:53]     "exeErrorCode": 0,
[2025-10-11 11:10:53]     "exeErrorDiag": "",
[2025-10-11 11:10:53]     "pilotErrorCode": 0,
[2025-10-11 11:10:53]     "pilotErrorDiag": "",
[2025-10-11 11:10:53]  *** Listing of results directory ***
[2025-10-11 11:10:53] total 628056
[2025-10-11 11:10:53] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 17:22 pilot3.tar.gz
[2025-10-11 11:10:53] -rwx------. 1 boincer umatlas     36292 Oct 10 17:24 runpilot2-wrapper.sh
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 17:24 queuedata.json
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas       100 Oct 10 23:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 11:10:53] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 23:48 run_atlas
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas       105 Oct 10 23:48 job.xml
[2025-10-11 11:10:53] -rw-r--r--. 3 boincer umatlas 220006254 Oct 10 23:48 EVNT.46676267._001835.pool.root.1
[2025-10-11 11:10:53] -rw-r--r--. 3 boincer umatlas 220006254 Oct 10 23:48 ATLAS.root_0
[2025-10-11 11:10:53] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 23:48 shared
[2025-10-11 11:10:53] -rw-r--r--. 2 boincer umatlas    569677 Oct 10 23:48 input.tar.gz
[2025-10-11 11:10:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 23:48 start_atlas.sh
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas         0 Oct 10 23:48 boinc_lockfile
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas      2549 Oct 11 03:09 pandaJob.out
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas    975525 Oct 11 03:10 agis_schedconf.cvmfs.json
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas 191366504 Oct 11 11:08 HITS.46676269._045370.pool.root.1
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas       531 Oct 11 11:08 boinc_task_state.xml
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas      1064 Oct 11 11:09 memory_monitor_summary.json
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas   1560580 Oct 11 11:09 agis_ddmendpoints.agis.ALL.json
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas    618430 Oct 11 11:09 log.46676269._045370.job.log.tgz.1
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas        97 Oct 11 11:09 pilot_heartbeat.json
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas      7849 Oct 11 11:09 heartbeat.json
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas      6843 Oct 11 11:09 init_data.xml
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 11:10 boinc_mmap_file
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas        28 Oct 11 11:10 wrapper_checkpoint.txt
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas      4824 Oct 11 11:10 pilotlog.txt
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas   3301564 Oct 11 11:10 log.46676269._045370.job.log.1
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas       357 Oct 11 11:10 output.list
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas       620 Oct 11 11:10 runtime_log
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas   3942400 Oct 11 11:10 result.tar.gz
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas      8794 Oct 11 11:10 runtime_log.err
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas       785 Oct 11 11:10 9HINDmimZR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyTeNDmxsCCem.diag
[2025-10-11 11:10:53] -rw-r--r--. 1 boincer umatlas     23184 Oct 11 11:10 stderr.txt
[2025-10-11 11:10:53] HITS file was successfully produced:
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas 191366504 Oct 11 11:08 shared/HITS.pool.root.1
[2025-10-11 11:10:53]  *** Contents of shared directory: ***
[2025-10-11 11:10:53] total 406168
[2025-10-11 11:10:53] -rw-r--r--. 3 boincer umatlas 220006254 Oct 10 23:48 ATLAS.root_0
[2025-10-11 11:10:53] -rw-r--r--. 2 boincer umatlas    569677 Oct 10 23:48 input.tar.gz
[2025-10-11 11:10:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 23:48 start_atlas.sh
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas 191366504 Oct 11 11:08 HITS.pool.root.1
[2025-10-11 11:10:53] -rw-------. 1 boincer umatlas   3942400 Oct 11 11:10 result.tar.gz
11:10:55 (2761597): run_atlas exited; CPU time 44191.327797
11:10:55 (2761597): called boinc_finish(0)

</stderr_txt>
]]>

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