Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:01:58 (2405643): wrapper (7.7.26015): starting
20:01:58 (2405643): wrapper: running run_atlas (--nthreads 12)
[2025-10-10 20:01:58] Arguments: --nthreads 12
[2025-10-10 20:01:58] Threads: 12
[2025-10-10 20:01:58] Checking for CVMFS
[2025-10-10 20:01:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 20:01:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 20:01:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 20:02:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 20:02:00] 2.11.5.0 2495 29121 234032 151569 0 418 41314906 45568000 18522 130560 0 223537478 99.825 114173208 21395 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-10 20:02:00] CVMFS is ok
[2025-10-10 20:02:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 20:02:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 20:02:00] Further information can be found at the LHC@home message board.
[2025-10-10 20:02:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 20:02:00] Checking for apptainer binary...
[2025-10-10 20:02:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 20:02:00] Running /usr/bin/apptainer --version
[2025-10-10 20:02:00] apptainer version 1.4.1-1.el9
[2025-10-10 20:02:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 20:02:00] wns0052.triumf.lcg
[2025-10-10 20:02:00] apptainer works
[2025-10-10 20:02:01] Set ATHENA_PROC_NUMBER=12
[2025-10-10 20:02:01] Set ATHENA_CORE_NUMBER=12
[2025-10-10 20:02:01] Starting ATLAS job with PandaID=6837785332
[2025-10-10 20:02:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 20:08:53]  *** The last 200 lines of the pilot log: ***
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | WARNING  | wrong length of table data, x=[1760151882.0], y=[1770.0] (must be same and length>=4)
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | could have reported an average CPU frequency of 2091 MHz (4 samples)
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | ..............................
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . Timing measurements:
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . get job = 0 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . initial setup = 4 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . payload setup = 29 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . stage-in = 0 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . payload execution = 74 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . stage-out = 1 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . log creation = 0 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | ..............................
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837785332/pilotlog.txt
[2025-10-10 20:08:53] 2025-10-11 03:07:56,898 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-10 20:08:53] - Log from pilotlog.txt -
[2025-10-10 20:08:53] 2025-10-11 03:07:56,778 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837785332/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | INFO     | extracted standard info from prmon json
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | WARNING  | wrong length of table data, x=[1760151882.0], y=[1770.0] (must be same and length>=4)
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | could have reported an average CPU frequency of 2091 MHz (4 samples)
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | ..............................
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . Timing measurements:
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . get job = 0 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . initial setup = 4 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . payload setup = 29 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . stage-in = 0 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . payload execution = 74 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . stage-out = 1 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . log creation = 0 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | ..............................
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837785332/pilotlog.txt
[2025-10-10 20:08:53] 2025-10-11 03:07:56,898 | WARNING  | 
[2025-10-10 20:08:53] [begin log extracts]
[2025-10-10 20:08:53] - Log from pilotlog.txt -
[2025-10-10 20:08:53] 2025-10-11 03:07:56,778 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6837785332/memory_monitor_summary.json (trf name=prmon)
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | INFO     | extracted standard info from prmon json
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | INFO     | extracted standard memory fields from prmon json
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-10 20:08:53] 2025-10-11 03:07:56,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | WARNING  | wrong length of table data, x=[1760151882.0], y=[1770.0] (must be same and length>=4)
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | could have reported an average CPU frequency of 2091 MHz (4 samples)
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | ..............................
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . Timing measurements:
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . get job = 0 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . initial setup = 4 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,780 | INFO     | . payload setup = 29 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . stage-in = 0 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . payload execution = 74 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . stage-out = 1 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | . log creation = 0 s
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | ..............................
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-10 20:08:53] 2025-10-11 03:07:56,802 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6837785332/pilotlog.txt
[2025-10-10 20:08:53] [end log extracts]
[2025-10-10 20:08:53] 2025-10-11 03:07:56,898 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-10 20:08:53] 2025-10-11 03:07:56,899 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-10 20:08:53] 2025-10-11 03:07:57,190 | INFO     | 
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | job summary report
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | --------------------------------------------------
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | PanDA job id: 6837785332
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | task id: 46676269
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-10 20:05:19,174 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | pilot state: failed 
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | transexitcode: 65
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | exeerrorcode: 65
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | exitcode: 65
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | cpuconsumptiontime: 23 s
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | nevents: 0
[2025-10-10 20:08:53] 2025-10-11 03:07:57,191 | INFO     | neventsw: 0
[2025-10-10 20:08:53] 2025-10-11 03:07:57,192 | INFO     | pid: 2428817
[2025-10-10 20:08:53] 2025-10-11 03:07:57,192 | INFO     | pgrp: 2428817
[2025-10-10 20:08:53] 2025-10-11 03:07:57,192 | INFO     | corecount: 12
[2025-10-10 20:08:53] 2025-10-11 03:07:57,192 | INFO     | event service: False
[2025-10-10 20:08:53] 2025-10-11 03:07:57,192 | INFO     | sizes: {0: 2348570, 1: 2348711, 2: 2348853, 3: 2348853, 14: 2348881, 25: 2349327, 36: 2349327, 108: 2372558, 110: 2376850, 114: 2376878, 255: 2377044}
[2025-10-10 20:08:53] 2025-10-11 03:07:57,192 | INFO     | --------------------------------------------------
[2025-10-10 20:08:53] 2025-10-11 03:07:57,192 | INFO     | 
[2025-10-10 20:08:53] 2025-10-11 03:07:57,192 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-10 20:08:53] 2025-10-11 03:07:57,223 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,223 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,223 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,224 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 20:08:53] 2025-10-11 03:07:57,225 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,225 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 20:08:53] 2025-10-11 03:07:57,225 | INFO     | job 6837785332 has completed (purged errors)
[2025-10-10 20:08:53] 2025-10-11 03:07:57,225 | INFO     | overall cleanup function is called
[2025-10-10 20:08:53] 2025-10-11 03:07:58,232 | INFO     | --- collectZombieJob: --- 10, [2428817]
[2025-10-10 20:08:53] 2025-10-11 03:07:58,232 | INFO     | zombie collector waiting for pid 2428817
[2025-10-10 20:08:53] 2025-10-11 03:07:58,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 20:08:53] 2025-10-11 03:07:58,232 | INFO     | collected zombie processes
[2025-10-10 20:08:53] 2025-10-11 03:07:58,232 | INFO     | will attempt to kill all subprocesses of pid=2428817
[2025-10-10 20:08:53] 2025-10-11 03:07:58,678 | INFO     | process IDs to be killed: [2428817] (in reverse order)
[2025-10-10 20:08:53] 2025-10-11 03:07:58,814 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 20:08:53] 2025-10-11 03:07:58,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 20:08:53] 2025-10-11 03:07:58,827 | INFO     | did not find any defunct processes belonging to 2428817
[2025-10-10 20:08:53] 2025-10-11 03:07:58,839 | INFO     | did not find any defunct processes belonging to 2428817
[2025-10-10 20:08:53] 2025-10-11 03:07:58,839 | INFO     | ready for new job
[2025-10-10 20:08:53] 2025-10-11 03:07:58,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 20:08:53] 2025-10-11 03:07:58,840 | INFO     | ***************************************
[2025-10-10 20:08:53] 2025-10-11 03:07:58,841 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-10 20:08:53] 2025-10-11 03:07:58,841 | INFO     | ***************************************
[2025-10-10 20:08:53] 2025-10-11 03:07:58,841 | INFO     | 
[2025-10-10 20:08:53] 2025-10-11 03:07:58,843 | INFO     | architecture information:
[2025-10-10 20:08:53] 2025-10-11 03:07:58,843 | INFO     | executing command: cat /etc/os-release
[2025-10-10 20:08:53] 2025-10-11 03:07:58,858 | INFO     | cat /etc/os-release:
[2025-10-10 20:08:53] NAME="CentOS Linux"
[2025-10-10 20:08:53] VERSION="7 (Core)"
[2025-10-10 20:08:53] ID="centos"
[2025-10-10 20:08:53] ID_LIKE="rhel fedora"
[2025-10-10 20:08:53] VERSION_ID="7"
[2025-10-10 20:08:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 20:08:53] ANSI_COLOR="0;31"
[2025-10-10 20:08:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 20:08:53] HOME_URL="https://www.centos.org/"
[2025-10-10 20:08:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 20:08:53] 
[2025-10-10 20:08:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 20:08:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 20:08:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 20:08:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 20:08:53] 
[2025-10-10 20:08:53] 2025-10-11 03:07:58,859 | INFO     | ***************************************
[2025-10-10 20:08:53] 2025-10-11 03:07:59,363 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-10 20:08:53] 2025-10-11 03:07:59,486 | INFO     | sufficient remaining disk space (1986189590528 B)
[2025-10-10 20:08:53] 2025-10-11 03:07:59,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 20:08:53] 2025-10-11 03:07:59,486 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 20:08:53] 2025-10-11 03:07:59,487 | INFO     | update_server=False
[2025-10-10 20:08:53] 2025-10-11 03:07:59,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 20:08:53] 2025-10-11 03:07:59,698 | INFO     | all payload control threads have been joined
[2025-10-10 20:08:53] 2025-10-11 03:08:00,105 | INFO     | all job control threads have been joined
[2025-10-10 20:08:53] 2025-10-11 03:08:00,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 20:08:53] 2025-10-11 03:08:00,261 | INFO     | aborting loop
[2025-10-10 20:08:53] 2025-10-11 03:08:00,492 | INFO     | [job] retrieve thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:00,499 | INFO     | all data control threads have been joined
[2025-10-10 20:08:53] 2025-10-11 03:08:00,704 | INFO     | [payload] control thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:00,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 20:08:53] 2025-10-11 03:08:00,910 | INFO     | [payload] validate_post thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:00,940 | INFO     | [payload] failed_post thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:01,063 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:01,111 | INFO     | [job] control thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:01,221 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:01,265 | INFO     | [job] job monitor thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:01,429 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:01,506 | INFO     | [data] control thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:01,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 20:08:53] 2025-10-11 03:08:01,710 | INFO     | [job] validate thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:01,790 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:01,807 | INFO     | [data] copytool_in thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:02,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 20:08:53] 2025-10-11 03:08:02,901 | INFO     | [data] copytool_out thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:03,211 | INFO     | [job] queue monitor thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:05,595 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 20:08:53] 2025-10-11 03:08:29,002 | INFO     | PID=2412157 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 20:08:53] 2025-10-11 03:08:29,002 | INFO     | .. there are 42 such processes running
[2025-10-10 20:08:53] 2025-10-11 03:08:29,002 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 20:08:53] 2025-10-11 03:08:29,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 20:08:53] 2025-10-11 03:08:29,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 20:08:53] 2025-10-11 03:08:45,664 | INFO     | [monitor] cgroup control has ended
[2025-10-10 20:08:53] 2025-10-11 03:08:46,236 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600451757888)>', '<ExcThread(monitor, started 140599613175552)>']
[2025-10-10 20:08:53] 2025-10-11 03:08:47,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 20:08:53] 2025-10-11 03:08:47,123 | INFO     | [monitor] control thread has ended
[2025-10-10 20:08:53] 2025-10-11 03:08:51,262 | INFO     | all workflow threads have been joined
[2025-10-10 20:08:53] 2025-10-11 03:08:51,263 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 20:08:53] 2025-10-11 03:08:51,263 | INFO     | traces error code: 0
[2025-10-10 20:08:53] 2025-10-11 03:08:51,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 20:08:53] 2025-10-11 03:08:52,287 [wrapper] ==== pilot stdout END ====
[2025-10-10 20:08:53] 2025-10-11 03:08:52,315 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 20:08:53] 2025-10-11 03:08:52,337 [wrapper] pilotpid: 2412157
[2025-10-10 20:08:53] 2025-10-11 03:08:52,357 [wrapper] Pilot exit status: 0
[2025-10-10 20:08:53] 2025-10-11 03:08:52,482 [wrapper] pandaids: 6837785332
[2025-10-10 20:08:53] 2025-10-11 03:08:52,795 [wrapper] cleanup supervisor_pilot 2412170 2412158
[2025-10-10 20:08:53] 2025-10-11 03:08:52,799 [wrapper] Test setup, not cleaning
[2025-10-10 20:08:53] 2025-10-11 03:08:52,802 [wrapper] apfmon messages muted
[2025-10-10 20:08:53] 2025-10-11 03:08:52,804 [wrapper] ==== wrapper stdout END ====
[2025-10-10 20:08:53] 2025-10-11 03:08:52,806 [wrapper] ==== wrapper stderr END ====
[2025-10-10 20:08:53]  *** Error codes and diagnostics ***
[2025-10-10 20:08:53]     "exeErrorCode": 65,
[2025-10-10 20:08:53]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 20:08:53]     "pilotErrorCode": 1305,
[2025-10-10 20:08:53]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-10 20:08:53]  *** Listing of results directory ***
[2025-10-10 20:08:53] total 218656
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc    557409 Oct 10 13:48 pilot3.tar.gz
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc      5112 Oct 10 13:50 queuedata.json
[2025-10-10 20:08:53] -rwx------. 1 boinc boinc     36292 Oct 10 13:52 runpilot2-wrapper.sh
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc       100 Oct 10 20:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 20:08:53] -rwxr-xr-x. 1 boinc boinc      7986 Oct 10 20:01 run_atlas
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc       105 Oct 10 20:01 job.xml
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc      6589 Oct 10 20:01 init_data.xml
[2025-10-10 20:08:53] -rw-r--r--. 2 boinc boinc 219756653 Oct 10 20:01 EVNT.46676267._001827.pool.root.1
[2025-10-10 20:08:53] -rw-r--r--. 2 boinc boinc     15120 Oct 10 20:01 start_atlas.sh
[2025-10-10 20:08:53] drwxrwx--x. 2 boinc boinc      4096 Oct 10 20:01 shared
[2025-10-10 20:08:53] -rw-r--r--. 2 boinc boinc    569678 Oct 10 20:01 input.tar.gz
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc         0 Oct 10 20:01 boinc_lockfile
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc      2546 Oct 10 20:02 pandaJob.out
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc    975509 Oct 10 20:02 agis_schedconf.cvmfs.json
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc   1560580 Oct 10 20:02 agis_ddmendpoints.agis.ALL.json
[2025-10-10 20:08:53] drwx------. 5 boinc boinc      4096 Oct 10 20:02 pilot3
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc       963 Oct 10 20:05 memory_monitor_summary.json
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc     21524 Oct 10 20:05 log.46676269._045163.job.log.tgz.1
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc        95 Oct 10 20:07 pilot_heartbeat.json
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc      8394 Oct 10 20:07 heartbeat.json
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc      8192 Oct 10 20:08 boinc_mmap_file
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc        23 Oct 10 20:08 wrapper_checkpoint.txt
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc       524 Oct 10 20:08 boinc_task_state.xml
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc      4823 Oct 10 20:08 pilotlog.txt
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc     97667 Oct 10 20:08 log.46676269._045163.job.log.1
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc       188 Oct 10 20:08 output.list
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc       620 Oct 10 20:08 runtime_log
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc    143360 Oct 10 20:08 result.tar.gz
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc       644 Oct 10 20:08 TXaNDmNHZR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUaQMDmwSGiOm.diag
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc      8528 Oct 10 20:08 runtime_log.err
[2025-10-10 20:08:53] -rw-r--r--. 1 boinc boinc     21830 Oct 10 20:08 stderr.txt
[2025-10-10 20:08:53] No HITS result produced
[2025-10-10 20:08:53]  *** Contents of shared directory: ***
[2025-10-10 20:08:53] total 215328
[2025-10-10 20:08:53] -rw-r--r--. 2 boinc boinc 219756653 Oct 10 20:01 ATLAS.root_0
[2025-10-10 20:08:53] -rw-r--r--. 2 boinc boinc     15120 Oct 10 20:01 start_atlas.sh
[2025-10-10 20:08:53] -rw-r--r--. 2 boinc boinc    569678 Oct 10 20:01 input.tar.gz
[2025-10-10 20:08:53] -rw-------. 1 boinc boinc    143360 Oct 10 20:08 result.tar.gz
20:08:55 (2405643): run_atlas exited; CPU time 38.133147
20:08:55 (2405643): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN