Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:02 (917138): wrapper (7.7.26015): starting
00:02:02 (917138): wrapper: running run_atlas (--nthreads 12)
[2025-10-11 00:02:02] Arguments: --nthreads 12
[2025-10-11 00:02:02] Threads: 12
[2025-10-11 00:02:02] Checking for CVMFS
[2025-10-11 00:02:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:02:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:02:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:02:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:02:05] 2.13.2.0 128758 114030 239016 151571 1 64 32832261 39288832 7930 16776704 0 69957163 99.711 55400736 33402 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-11 00:02:05] CVMFS is ok
[2025-10-11 00:02:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:02:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:02:05] Further information can be found at the LHC@home message board.
[2025-10-11 00:02:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:02:05] Checking for apptainer binary...
[2025-10-11 00:02:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:02:05] Running /usr/bin/apptainer --version
[2025-10-11 00:02:05] apptainer version 1.4.3-1.el9
[2025-10-11 00:02:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:02:06] c-210-27.aglt2.org
[2025-10-11 00:02:06] apptainer works
[2025-10-11 00:02:06] Set ATHENA_PROC_NUMBER=12
[2025-10-11 00:02:06] Set ATHENA_CORE_NUMBER=12
[2025-10-11 00:02:06] Starting ATLAS job with PandaID=6837875519
[2025-10-11 00:02:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 02:23:39]  *** The last 200 lines of the pilot log: ***
[2025-10-11 02:23:39] 2025-10-11 06:22:37,973 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 02:23:39] 2025-10-11 06:22:37,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 02:23:39] 2025-10-11 06:22:37,976 | INFO     | fitting pss+swap vs Time
[2025-10-11 02:23:39] 2025-10-11 06:22:37,977 | INFO     | sum of square deviations: 762999576.6370363
[2025-10-11 02:23:39] 2025-10-11 06:22:37,977 | INFO     | sum of deviations: 45059155915.99257
[2025-10-11 02:23:39] 2025-10-11 06:22:37,978 | INFO     | mean x: 1760159635.0518517
[2025-10-11 02:23:39] 2025-10-11 06:22:37,978 | INFO     | mean y: 2603868.4296296295
[2025-10-11 02:23:39] 2025-10-11 06:22:37,978 | INFO     | -- intersect: -103944121478.92513
[2025-10-11 02:23:39] 2025-10-11 06:22:37,978 | INFO     | intersect: -103944121478.92513
[2025-10-11 02:23:39] 2025-10-11 06:22:37,978 | INFO     | chi2: 4.515859568943828
[2025-10-11 02:23:39] 2025-10-11 06:22:37,979 | INFO     | sum of square deviations: 681376233.3923067
[2025-10-11 02:23:39] 2025-10-11 06:22:37,979 | INFO     | sum of deviations: 53368908879.28463
[2025-10-11 02:23:39] 2025-10-11 06:22:37,979 | INFO     | mean x: 1760159482.5923078
[2025-10-11 02:23:39] 2025-10-11 06:22:37,980 | INFO     | mean y: 2618845.684615385
[2025-10-11 02:23:39] 2025-10-11 06:22:37,980 | INFO     | -- intersect: -137862170731.43054
[2025-10-11 02:23:39] 2025-10-11 06:22:37,980 | INFO     | intersect: -137862170731.43054
[2025-10-11 02:23:39] 2025-10-11 06:22:37,980 | INFO     | chi2: 3.7278730536951032
[2025-10-11 02:23:39] 2025-10-11 06:22:37,980 | INFO     | current chi2=3.7278730536951032 (change=17.449313983716713 %)
[2025-10-11 02:23:39] 2025-10-11 06:22:37,980 | INFO     | right removable region: 129
[2025-10-11 02:23:39] 2025-10-11 06:22:37,981 | INFO     | sum of square deviations: 681289613.3923067
[2025-10-11 02:23:39] 2025-10-11 06:22:37,981 | INFO     | sum of deviations: 5890779787.246153
[2025-10-11 02:23:39] 2025-10-11 06:22:37,981 | INFO     | mean x: 1760159787.5923078
[2025-10-11 02:23:39] 2025-10-11 06:22:37,982 | INFO     | mean y: 2676666.6461538463
[2025-10-11 02:23:39] 2025-10-11 06:22:37,982 | INFO     | -- intersect: -15216568563.651575
[2025-10-11 02:23:39] 2025-10-11 06:22:37,982 | INFO     | intersect: -15216568563.651575
[2025-10-11 02:23:39] 2025-10-11 06:22:37,982 | INFO     | chi2: 1.5214434291319072
[2025-10-11 02:23:39] 2025-10-11 06:22:37,982 | INFO     | current chi2=1.5214434291319072 (change=66.30888525420325 %)
[2025-10-11 02:23:39] 2025-10-11 06:22:37,983 | INFO     | sum of square deviations: 605634205.952
[2025-10-11 02:23:39] 2025-10-11 06:22:37,983 | INFO     | sum of deviations: -8821113921.343998
[2025-10-11 02:23:39] 2025-10-11 06:22:37,984 | INFO     | mean x: 1760159940.128
[2025-10-11 02:23:39] 2025-10-11 06:22:37,984 | INFO     | mean y: 2706141.584
[2025-10-11 02:23:39] 2025-10-11 06:22:37,984 | INFO     | -- intersect: 25639585959.57382
[2025-10-11 02:23:39] 2025-10-11 06:22:37,984 | INFO     | intersect: 25639585959.57382
[2025-10-11 02:23:39] 2025-10-11 06:22:37,984 | INFO     | chi2: 1.0757448543050452
[2025-10-11 02:23:39] 2025-10-11 06:22:37,984 | INFO     | current chi2=1.0757448543050452 (change=29.294455928681167 %)
[2025-10-11 02:23:39] 2025-10-11 06:22:37,985 | INFO     | sum of square deviations: 535785234.3250002
[2025-10-11 02:23:39] 2025-10-11 06:22:37,985 | INFO     | sum of deviations: -17804522598.450005
[2025-10-11 02:23:39] 2025-10-11 06:22:37,985 | INFO     | mean x: 1760160092.675
[2025-10-11 02:23:39] 2025-10-11 06:22:37,986 | INFO     | mean y: 2725747.1166666667
[2025-10-11 02:23:39] 2025-10-11 06:22:37,986 | INFO     | -- intersect: 58494091576.56799
[2025-10-11 02:23:39] 2025-10-11 06:22:37,986 | INFO     | intersect: 58494091576.56799
[2025-10-11 02:23:39] 2025-10-11 06:22:37,986 | INFO     | chi2: 0.8791123292451597
[2025-10-11 02:23:39] 2025-10-11 06:22:37,986 | INFO     | current chi2=0.8791123292451597 (change=18.27873257055126 %)
[2025-10-11 02:23:39] 2025-10-11 06:22:37,986 | INFO     | left removable region: 30
[2025-10-11 02:23:39] 2025-10-11 06:22:37,987 | INFO     | sum of square deviations: 300818881.6565657
[2025-10-11 02:23:39] 2025-10-11 06:22:37,987 | INFO     | sum of deviations: -8502826304.373741
[2025-10-11 02:23:39] 2025-10-11 06:22:37,987 | INFO     | mean x: 1760160367.3232324
[2025-10-11 02:23:39] 2025-10-11 06:22:37,987 | INFO     | mean y: 2749268.292929293
[2025-10-11 02:23:39] 2025-10-11 06:22:37,987 | INFO     | -- intersect: 49754738866.73398
[2025-10-11 02:23:39] 2025-10-11 06:22:37,988 | INFO     | intersect: 49754738866.73398
[2025-10-11 02:23:39] 2025-10-11 06:22:37,988 | INFO     | chi2: 0.017820232275860194
[2025-10-11 02:23:39] 2025-10-11 06:22:37,988 | INFO     | -- intersect: 49754738866.73398
[2025-10-11 02:23:39] 2025-10-11 06:22:37,988 | INFO     | current memory leak: -28.27 B/s (using 99 data points, chi2=0.02)
[2025-10-11 02:23:39] 2025-10-11 06:22:37,989 | INFO     | could have reported an average CPU frequency of 2600 MHz (8 samples)
[2025-10-11 02:23:39] 2025-10-11 06:22:37,989 | INFO     | ..............................
[2025-10-11 02:23:39] 2025-10-11 06:22:37,989 | INFO     | . Timing measurements:
[2025-10-11 02:23:39] 2025-10-11 06:22:37,989 | INFO     | . get job = 0 s
[2025-10-11 02:23:39] 2025-10-11 06:22:37,989 | INFO     | . initial setup = 5 s
[2025-10-11 02:23:39] 2025-10-11 06:22:37,989 | INFO     | . payload setup = 45 s
[2025-10-11 02:23:39] 2025-10-11 06:22:37,989 | INFO     | . stage-in = 0 s
[2025-10-11 02:23:39] 2025-10-11 06:22:37,990 | INFO     | . payload execution = 8226 s
[2025-10-11 02:23:39] 2025-10-11 06:22:37,990 | INFO     | . stage-out = 1 s
[2025-10-11 02:23:39] 2025-10-11 06:22:37,990 | INFO     | . log creation = 0 s
[2025-10-11 02:23:39] 2025-10-11 06:22:37,990 | INFO     | ..............................
[2025-10-11 02:23:39] 2025-10-11 06:22:38,184 | INFO     | 
[2025-10-11 02:23:39] 2025-10-11 06:22:38,184 | INFO     | job summary report
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | --------------------------------------------------
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | PanDA job id: 6837875519
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | task id: 46676269
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | errors: (none)
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | pilot state: finished 
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | transexitcode: 0
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | exeerrorcode: 0
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | exeerrordiag: 
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | exitcode: 0
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | exitmsg: OK
[2025-10-11 02:23:39] 2025-10-11 06:22:38,185 | INFO     | cpuconsumptiontime: 50943 s
[2025-10-11 02:23:39] 2025-10-11 06:22:38,186 | INFO     | nevents: 400
[2025-10-11 02:23:39] 2025-10-11 06:22:38,186 | INFO     | neventsw: 0
[2025-10-11 02:23:39] 2025-10-11 06:22:38,186 | INFO     | pid: 928372
[2025-10-11 02:23:39] 2025-10-11 06:22:38,186 | INFO     | pgrp: 928372
[2025-10-11 02:23:39] 2025-10-11 06:22:38,186 | INFO     | corecount: 12
[2025-10-11 02:23:39] 2025-10-11 06:22:38,186 | INFO     | event service: False
[2025-10-11 02:23:39] 2025-10-11 06:22:38,186 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 28: 2349203, 34: 2349231, 8276: 2377236, 8279: 2386290, 8291: 2386428}
[2025-10-11 02:23:39] 2025-10-11 06:22:38,186 | INFO     | --------------------------------------------------
[2025-10-11 02:23:39] 2025-10-11 06:22:38,186 | INFO     | 
[2025-10-11 02:23:39] 2025-10-11 06:22:38,186 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 02:23:39] 2025-10-11 06:22:38,218 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,219 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,220 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,222 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 02:23:39] 2025-10-11 06:22:38,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,222 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 02:23:39] 2025-10-11 06:22:38,222 | INFO     | job 6837875519 has completed (purged errors)
[2025-10-11 02:23:39] 2025-10-11 06:22:38,222 | INFO     | overall cleanup function is called
[2025-10-11 02:23:39] 2025-10-11 06:22:39,230 | INFO     | --- collectZombieJob: --- 10, [928372]
[2025-10-11 02:23:39] 2025-10-11 06:22:39,230 | INFO     | zombie collector waiting for pid 928372
[2025-10-11 02:23:39] 2025-10-11 06:22:39,231 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 02:23:39] 2025-10-11 06:22:39,231 | INFO     | collected zombie processes
[2025-10-11 02:23:39] 2025-10-11 06:22:39,231 | INFO     | will attempt to kill all subprocesses of pid=928372
[2025-10-11 02:23:39] 2025-10-11 06:22:39,519 | INFO     | process IDs to be killed: [928372] (in reverse order)
[2025-10-11 02:23:39] 2025-10-11 06:22:39,748 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 02:23:39] 2025-10-11 06:22:39,749 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 02:23:39] 2025-10-11 06:22:39,760 | INFO     | did not find any defunct processes belonging to 928372
[2025-10-11 02:23:39] 2025-10-11 06:22:39,773 | INFO     | did not find any defunct processes belonging to 928372
[2025-10-11 02:23:39] 2025-10-11 06:22:39,774 | INFO     | ready for new job
[2025-10-11 02:23:39] 2025-10-11 06:22:39,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 02:23:39] 2025-10-11 06:22:39,775 | INFO     | ***************************************
[2025-10-11 02:23:39] 2025-10-11 06:22:39,776 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 02:23:39] 2025-10-11 06:22:39,776 | INFO     | ***************************************
[2025-10-11 02:23:39] 2025-10-11 06:22:39,776 | INFO     | 
[2025-10-11 02:23:39] 2025-10-11 06:22:39,778 | INFO     | architecture information:
[2025-10-11 02:23:39] 2025-10-11 06:22:39,778 | INFO     | executing command: cat /etc/os-release
[2025-10-11 02:23:39] 2025-10-11 06:22:39,799 | INFO     | cat /etc/os-release:
[2025-10-11 02:23:39] NAME="CentOS Linux"
[2025-10-11 02:23:39] VERSION="7 (Core)"
[2025-10-11 02:23:39] ID="centos"
[2025-10-11 02:23:39] ID_LIKE="rhel fedora"
[2025-10-11 02:23:39] VERSION_ID="7"
[2025-10-11 02:23:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 02:23:39] ANSI_COLOR="0;31"
[2025-10-11 02:23:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 02:23:39] HOME_URL="https://www.centos.org/"
[2025-10-11 02:23:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 02:23:39] 
[2025-10-11 02:23:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 02:23:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 02:23:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 02:23:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 02:23:39] 
[2025-10-11 02:23:39] 2025-10-11 06:22:39,799 | INFO     | ***************************************
[2025-10-11 02:23:39] 2025-10-11 06:22:40,302 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 02:23:39] 2025-10-11 06:22:40,326 | INFO     | sufficient remaining disk space (52552531968 B)
[2025-10-11 02:23:39] 2025-10-11 06:22:40,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 02:23:39] 2025-10-11 06:22:40,326 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 02:23:39] 2025-10-11 06:22:40,326 | INFO     | update_server=False
[2025-10-11 02:23:39] 2025-10-11 06:22:40,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 02:23:39] 2025-10-11 06:22:40,327 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:23:39] 2025-10-11 06:22:40,327 | INFO     | aborting loop
[2025-10-11 02:23:39] 2025-10-11 06:22:41,332 | INFO     | [job] retrieve thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:41,338 | INFO     | [job] job monitor thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:41,349 | INFO     | all payload control threads have been joined
[2025-10-11 02:23:39] 2025-10-11 06:22:41,399 | INFO     | all job control threads have been joined
[2025-10-11 02:23:39] 2025-10-11 06:22:41,402 | INFO     | all data control threads have been joined
[2025-10-11 02:23:39] 2025-10-11 06:22:41,409 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:41,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 02:23:39] 2025-10-11 06:22:41,679 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 02:23:39] 2025-10-11 06:22:41,847 | INFO     | [payload] failed_post thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:41,924 | INFO     | [payload] validate_post thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:42,021 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:42,072 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:42,150 | INFO     | [job] validate thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:42,211 | INFO     | [data] copytool_in thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:42,354 | INFO     | [payload] control thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:42,405 | INFO     | [job] control thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:42,409 | INFO     | [data] control thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:43,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 02:23:39] 2025-10-11 06:22:43,685 | INFO     | [data] copytool_out thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:44,204 | INFO     | [job] queue monitor thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:45,461 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:22:50,619 | INFO     | job.realtimelogging is not enabled
[2025-10-11 02:23:39] 2025-10-11 06:22:51,625 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 02:23:39] 2025-10-11 06:23:10,648 | INFO     | PID=921203 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-11 02:23:39] 2025-10-11 06:23:10,648 | INFO     | .. there are 7 such processes running
[2025-10-11 02:23:39] 2025-10-11 06:23:10,649 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 02:23:39] 2025-10-11 06:23:10,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 02:23:39] 2025-10-11 06:23:10,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 02:23:39] 2025-10-11 06:23:33,198 | INFO     | [monitor] cgroup control has ended
[2025-10-11 02:23:39] 2025-10-11 06:23:33,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140678542001984)>', '<ExcThread(monitor, started 140677828572928)>']
[2025-10-11 02:23:39] 2025-10-11 06:23:33,803 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 02:23:39] 2025-10-11 06:23:33,803 | INFO     | [monitor] control thread has ended
[2025-10-11 02:23:39] 2025-10-11 06:23:38,582 | INFO     | all workflow threads have been joined
[2025-10-11 02:23:39] 2025-10-11 06:23:38,582 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 02:23:39] 2025-10-11 06:23:38,583 | INFO     | traces error code: 0
[2025-10-11 02:23:39] 2025-10-11 06:23:38,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 02:23:39] 2025-10-11 06:23:39,062 [wrapper] ==== pilot stdout END ====
[2025-10-11 02:23:39] 2025-10-11 06:23:39,115 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 02:23:39] 2025-10-11 06:23:39,181 [wrapper] pilotpid: 921203
[2025-10-11 02:23:39] 2025-10-11 06:23:39,225 [wrapper] Pilot exit status: 0
[2025-10-11 02:23:39] 2025-10-11 06:23:39,353 [wrapper] pandaids: 6837875519
[2025-10-11 02:23:39] 2025-10-11 06:23:39,451 [wrapper] cleanup supervisor_pilot 1127876 921204
[2025-10-11 02:23:39] 2025-10-11 06:23:39,519 [wrapper] Test setup, not cleaning
[2025-10-11 02:23:39] 2025-10-11 06:23:39,593 [wrapper] apfmon messages muted
[2025-10-11 02:23:39] 2025-10-11 06:23:39,610 [wrapper] ==== wrapper stdout END ====
[2025-10-11 02:23:39] 2025-10-11 06:23:39,614 [wrapper] ==== wrapper stderr END ====
[2025-10-11 02:23:39]  *** Error codes and diagnostics ***
[2025-10-11 02:23:39]     "exeErrorCode": 0,
[2025-10-11 02:23:39]     "exeErrorDiag": "",
[2025-10-11 02:23:39]     "pilotErrorCode": 0,
[2025-10-11 02:23:39]     "pilotErrorDiag": "",
[2025-10-11 02:23:39]  *** Listing of results directory ***
[2025-10-11 02:23:39] total 418844
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 20:00 pilot3.tar.gz
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 20:11 queuedata.json
[2025-10-11 02:23:39] -rwx------. 1 boincer umatlas     36292 Oct 10 20:12 runpilot2-wrapper.sh
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 02:23:39] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:02 run_atlas
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:02 job.xml
[2025-10-11 02:23:39] -rw-r--r--. 2 boincer umatlas 223039858 Oct 11 00:02 EVNT.46676267._001917.pool.root.1
[2025-10-11 02:23:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 02:23:39] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:02 shared
[2025-10-11 02:23:39] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 00:02 input.tar.gz
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:02 boinc_lockfile
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:02 pandaJob.out
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas    975509 Oct 11 00:03 agis_schedconf.cvmfs.json
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas   1560580 Oct 11 00:03 agis_ddmendpoints.agis.ALL.json
[2025-10-11 02:23:39] drwx------. 5 boincer umatlas      4096 Oct 11 00:03 pilot3
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas 198752212 Oct 11 02:21 HITS.46676269._047473.pool.root.1
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas       529 Oct 11 02:21 boinc_task_state.xml
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas      1039 Oct 11 02:22 memory_monitor_summary.json
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas    441554 Oct 11 02:22 log.46676269._047473.job.log.tgz.1
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas      6659 Oct 11 02:22 init_data.xml
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas      7830 Oct 11 02:22 heartbeat.json
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas        95 Oct 11 02:23 pilot_heartbeat.json
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 02:23 boinc_mmap_file
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas        27 Oct 11 02:23 wrapper_checkpoint.txt
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas      4894 Oct 11 02:23 pilotlog.txt
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas   1159283 Oct 11 02:23 log.46676269._047473.job.log.1
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas       357 Oct 11 02:23 output.list
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas       620 Oct 11 02:23 runtime_log
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas   1617920 Oct 11 02:23 result.tar.gz
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas      8705 Oct 11 02:23 runtime_log.err
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas       653 Oct 11 02:23 moYLDmjOcR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9oeNDmg9JhIn.diag
[2025-10-11 02:23:39] -rw-r--r--. 1 boincer umatlas     20961 Oct 11 02:23 stderr.txt
[2025-10-11 02:23:39] HITS file was successfully produced:
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas 198752212 Oct 11 02:21 shared/HITS.pool.root.1
[2025-10-11 02:23:39]  *** Contents of shared directory: ***
[2025-10-11 02:23:39] total 414072
[2025-10-11 02:23:39] -rw-r--r--. 2 boincer umatlas 223039858 Oct 11 00:02 ATLAS.root_0
[2025-10-11 02:23:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:02 start_atlas.sh
[2025-10-11 02:23:39] -rw-r--r--. 2 boincer umatlas    569680 Oct 11 00:02 input.tar.gz
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas 198752212 Oct 11 02:21 HITS.pool.root.1
[2025-10-11 02:23:39] -rw-------. 1 boincer umatlas   1617920 Oct 11 02:23 result.tar.gz
02:23:41 (917138): run_atlas exited; CPU time 51086.021764
02:23:41 (917138): called boinc_finish(0)

</stderr_txt>
]]>

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