Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:20:37 (857769): wrapper (7.7.26015): starting
23:20:37 (857769): wrapper: running run_atlas (--nthreads 4)
[2025-10-11 23:20:37] Arguments: --nthreads 4
[2025-10-11 23:20:37] Threads: 4
[2025-10-11 23:20:37] Checking for CVMFS
[2025-10-11 23:20:37] No cvmfs_config command found, will try listing directly
[2025-10-11 23:20:37] CVMFS is ok
[2025-10-11 23:20:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 23:20:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 23:20:37] Further information can be found at the LHC@home message board.
[2025-10-11 23:20:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 23:20:37] Checking for apptainer binary...
[2025-10-11 23:20:37] which: no apptainer in ((null))
[2025-10-11 23:20:37] apptainer is not installed, using version from CVMFS
[2025-10-11 23:20:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 23:20:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2025-10-11 23:20:37] apptainer works
[2025-10-11 23:20:37] Set ATHENA_PROC_NUMBER=4
[2025-10-11 23:20:37] Set ATHENA_CORE_NUMBER=4
[2025-10-11 23:20:37] Starting ATLAS job with PandaID=6837705179
[2025-10-11 23:20:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 05:11:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 05:11:08] 2025-10-12 00:40:08,282 | INFO     | monitor loop #874: job 0:6837705179 is in state 'finished'
[2025-10-12 05:11:08] 2025-10-12 00:40:08,283 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 05:11:08] 2025-10-12 00:40:09,897 | INFO     | time since job start (11962s) is within the limit (172800.0s)
[2025-10-12 05:11:08] 2025-10-12 00:40:10,439 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 05:11:08] 2025-10-12 00:40:10,447 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2624.0407749999995
[2025-10-12 05:11:08] 2025-10-12 00:40:10,454 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6837705179/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 05:11:08] 2025-10-12 00:40:10,455 | INFO     | extracted standard info from prmon json
[2025-10-12 05:11:08] 2025-10-12 00:40:10,455 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 05:11:08] 2025-10-12 00:40:10,456 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 05:11:08] 2025-10-12 00:40:10,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 05:11:08] 2025-10-12 00:40:10,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 05:11:08] 2025-10-12 00:40:10,460 | INFO     | fitting pss+swap vs Time
[2025-10-12 05:11:08] 2025-10-12 00:40:10,461 | INFO     | sum of square deviations: 2334722845.0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,462 | INFO     | sum of deviations: -43615166926.5
[2025-10-12 05:11:08] 2025-10-12 00:40:10,462 | INFO     | mean x: 1760223618.5
[2025-10-12 05:11:08] 2025-10-12 00:40:10,462 | INFO     | mean y: 2408751.0969387754
[2025-10-12 05:11:08] 2025-10-12 00:40:10,463 | INFO     | -- intersect: 32885304086.301216
[2025-10-12 05:11:08] 2025-10-12 00:40:10,463 | INFO     | intersect: 32885304086.301216
[2025-10-12 05:11:08] 2025-10-12 00:40:10,463 | INFO     | chi2: 1.7044353548806672
[2025-10-12 05:11:08] 2025-10-12 00:40:10,464 | INFO     | sum of square deviations: 2160561440.0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,465 | INFO     | sum of deviations: -42399882989.00001
[2025-10-12 05:11:08] 2025-10-12 00:40:10,465 | INFO     | mean x: 1760223466.0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,465 | INFO     | mean y: 2409820.6387434555
[2025-10-12 05:11:08] 2025-10-12 00:40:10,465 | INFO     | -- intersect: 34545870428.21676
[2025-10-12 05:11:08] 2025-10-12 00:40:10,465 | INFO     | intersect: 34545870428.21676
[2025-10-12 05:11:08] 2025-10-12 00:40:10,466 | INFO     | chi2: 1.6952844734521386
[2025-10-12 05:11:08] 2025-10-12 00:40:10,466 | INFO     | current chi2=1.6952844734521386 (change=0.5368863889337289 %)
[2025-10-12 05:11:08] 2025-10-12 00:40:10,466 | INFO     | right removable region: 190
[2025-10-12 05:11:08] 2025-10-12 00:40:10,467 | INFO     | sum of square deviations: 2160561440.0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,468 | INFO     | sum of deviations: -65756897303.0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,468 | INFO     | mean x: 1760223771.0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,468 | INFO     | mean y: 2427820.376963351
[2025-10-12 05:11:08] 2025-10-12 00:40:10,468 | INFO     | -- intersect: 53575009278.623474
[2025-10-12 05:11:08] 2025-10-12 00:40:10,468 | INFO     | intersect: 53575009278.623474
[2025-10-12 05:11:08] 2025-10-12 00:40:10,469 | INFO     | chi2: 0.40490364780489
[2025-10-12 05:11:08] 2025-10-12 00:40:10,469 | INFO     | current chi2=0.40490364780489 (change=76.24411822686942 %)
[2025-10-12 05:11:08] 2025-10-12 00:40:10,469 | INFO     | sum of square deviations: 1995283922.5
[2025-10-12 05:11:08] 2025-10-12 00:40:10,471 | INFO     | sum of deviations: -60121903505.5
[2025-10-12 05:11:08] 2025-10-12 00:40:10,471 | INFO     | mean x: 1760223923.5
[2025-10-12 05:11:08] 2025-10-12 00:40:10,471 | INFO     | mean y: 2422597.059139785
[2025-10-12 05:11:08] 2025-10-12 00:40:10,471 | INFO     | -- intersect: 53041497228.674446
[2025-10-12 05:11:08] 2025-10-12 00:40:10,471 | INFO     | intersect: 53041497228.674446
[2025-10-12 05:11:08] 2025-10-12 00:40:10,472 | INFO     | chi2: 0.4012611514767925
[2025-10-12 05:11:08] 2025-10-12 00:40:10,472 | INFO     | current chi2=0.4012611514767925 (change=0.8995958292410212 %)
[2025-10-12 05:11:08] 2025-10-12 00:40:10,472 | INFO     | left removable region: 20
[2025-10-12 05:11:08] 2025-10-12 00:40:10,472 | INFO     | sum of square deviations: 1523386702.5
[2025-10-12 05:11:08] 2025-10-12 00:40:10,473 | INFO     | sum of deviations: -41546542490.5
[2025-10-12 05:11:08] 2025-10-12 00:40:10,474 | INFO     | mean x: 1760224045.5
[2025-10-12 05:11:08] 2025-10-12 00:40:10,474 | INFO     | mean y: 2406612.123529412
[2025-10-12 05:11:08] 2025-10-12 00:40:10,474 | INFO     | -- intersect: 48008092219.82336
[2025-10-12 05:11:08] 2025-10-12 00:40:10,474 | INFO     | intersect: 48008092219.82336
[2025-10-12 05:11:08] 2025-10-12 00:40:10,474 | INFO     | chi2: 0.35277920858537926
[2025-10-12 05:11:08] 2025-10-12 00:40:10,475 | INFO     | -- intersect: 48008092219.82336
[2025-10-12 05:11:08] 2025-10-12 00:40:10,475 | INFO     | current memory leak: -27.27 B/s (using 170 data points, chi2=0.35)
[2025-10-12 05:11:08] 2025-10-12 00:40:10,475 | INFO     | could have reported an average CPU frequency of 2594 MHz (10 samples)
[2025-10-12 05:11:08] 2025-10-12 00:40:10,475 | INFO     | ..............................
[2025-10-12 05:11:08] 2025-10-12 00:40:10,476 | INFO     | . Timing measurements:
[2025-10-12 05:11:08] 2025-10-12 00:40:10,476 | INFO     | . get job = 0 s
[2025-10-12 05:11:08] 2025-10-12 00:40:10,476 | INFO     | . initial setup = 1 s
[2025-10-12 05:11:08] 2025-10-12 00:40:10,476 | INFO     | . payload setup = 5 s
[2025-10-12 05:11:08] 2025-10-12 00:40:10,476 | INFO     | . stage-in = 0 s
[2025-10-12 05:11:08] 2025-10-12 00:40:10,476 | INFO     | . payload execution = 11929 s
[2025-10-12 05:11:08] 2025-10-12 00:40:10,476 | INFO     | . stage-out = 1 s
[2025-10-12 05:11:08] 2025-10-12 00:40:10,477 | INFO     | . log creation = 0 s
[2025-10-12 05:11:08] 2025-10-12 00:40:10,477 | INFO     | ..............................
[2025-10-12 05:11:08] 2025-10-12 00:40:10,591 | INFO     | 
[2025-10-12 05:11:08] 2025-10-12 00:40:10,591 | INFO     | job summary report
[2025-10-12 05:11:08] 2025-10-12 00:40:10,591 | INFO     | --------------------------------------------------
[2025-10-12 05:11:08] 2025-10-12 00:40:10,591 | INFO     | PanDA job id: 6837705179
[2025-10-12 05:11:08] 2025-10-12 00:40:10,591 | INFO     | task id: 46676269
[2025-10-12 05:11:08] 2025-10-12 00:40:10,591 | INFO     | errors: (none)
[2025-10-12 05:11:08] 2025-10-12 00:40:10,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 05:11:08] 2025-10-12 00:40:10,592 | INFO     | pilot state: finished 
[2025-10-12 05:11:08] 2025-10-12 00:40:10,592 | INFO     | transexitcode: 0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,592 | INFO     | exeerrorcode: 0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,592 | INFO     | exeerrordiag: 
[2025-10-12 05:11:08] 2025-10-12 00:40:10,592 | INFO     | exitcode: 0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,592 | INFO     | exitmsg: OK
[2025-10-12 05:11:08] 2025-10-12 00:40:10,592 | INFO     | cpuconsumptiontime: 45716 s
[2025-10-12 05:11:08] 2025-10-12 00:40:10,592 | INFO     | nevents: 400
[2025-10-12 05:11:08] 2025-10-12 00:40:10,592 | INFO     | neventsw: 0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,592 | INFO     | pid: 868207
[2025-10-12 05:11:08] 2025-10-12 00:40:10,593 | INFO     | pgrp: 868207
[2025-10-12 05:11:08] 2025-10-12 00:40:10,593 | INFO     | corecount: 4
[2025-10-12 05:11:08] 2025-10-12 00:40:10,593 | INFO     | event service: False
[2025-10-12 05:11:08] 2025-10-12 00:40:10,593 | INFO     | sizes: {0: 2348640, 1: 2348895, 5: 2349157, 12: 2349213, 11938: 2378800, 11940: 2387820, 11943: 2388004, 11948: 2388198}
[2025-10-12 05:11:08] 2025-10-12 00:40:10,593 | INFO     | --------------------------------------------------
[2025-10-12 05:11:08] 2025-10-12 00:40:10,593 | INFO     | 
[2025-10-12 05:11:08] 2025-10-12 00:40:10,593 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-10-12 05:11:08] 2025-10-12 00:40:10,612 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,612 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,612 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,612 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,614 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 05:11:08] 2025-10-12 00:40:10,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,614 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 05:11:08] 2025-10-12 00:40:10,614 | INFO     | job 6837705179 has completed (purged errors)
[2025-10-12 05:11:08] 2025-10-12 00:40:10,614 | INFO     | overall cleanup function is called
[2025-10-12 05:11:08] 2025-10-12 00:40:11,622 | INFO     | --- collectZombieJob: --- 10, [868207]
[2025-10-12 05:11:08] 2025-10-12 00:40:11,623 | INFO     | zombie collector waiting for pid 868207
[2025-10-12 05:11:08] 2025-10-12 00:40:11,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 05:11:08] 2025-10-12 00:40:11,623 | INFO     | collected zombie processes
[2025-10-12 05:11:08] 2025-10-12 00:40:11,623 | INFO     | will attempt to kill all subprocesses of pid=868207
[2025-10-12 05:11:08] 2025-10-12 00:40:11,917 | INFO     | process IDs to be killed: [868207] (in reverse order)
[2025-10-12 05:11:08] 2025-10-12 00:40:11,994 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 05:11:08] 2025-10-12 00:40:11,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 05:11:08] 2025-10-12 00:40:12,003 | INFO     | did not find any defunct processes belonging to 868207
[2025-10-12 05:11:08] 2025-10-12 00:40:12,010 | INFO     | did not find any defunct processes belonging to 868207
[2025-10-12 05:11:08] 2025-10-12 00:40:12,010 | INFO     | ready for new job
[2025-10-12 05:11:08] 2025-10-12 00:40:12,010 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 05:11:08] 2025-10-12 00:40:12,012 | INFO     | ***************************************
[2025-10-12 05:11:08] 2025-10-12 00:40:12,013 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 05:11:08] 2025-10-12 00:40:12,013 | INFO     | ***************************************
[2025-10-12 05:11:08] 2025-10-12 00:40:12,013 | INFO     | 
[2025-10-12 05:11:08] 2025-10-12 00:40:12,015 | INFO     | architecture information:
[2025-10-12 05:11:08] 2025-10-12 00:40:12,016 | INFO     | executing command: cat /etc/os-release
[2025-10-12 05:11:08] 2025-10-12 00:40:12,028 | INFO     | cat /etc/os-release:
[2025-10-12 05:11:08] NAME="CentOS Linux"
[2025-10-12 05:11:08] VERSION="7 (Core)"
[2025-10-12 05:11:08] ID="centos"
[2025-10-12 05:11:08] ID_LIKE="rhel fedora"
[2025-10-12 05:11:08] VERSION_ID="7"
[2025-10-12 05:11:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 05:11:08] ANSI_COLOR="0;31"
[2025-10-12 05:11:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 05:11:08] HOME_URL="https://www.centos.org/"
[2025-10-12 05:11:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 05:11:08] 
[2025-10-12 05:11:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 05:11:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 05:11:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 05:11:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 05:11:08] 
[2025-10-12 05:11:08] 2025-10-12 00:40:12,028 | INFO     | ***************************************
[2025-10-12 05:11:08] 2025-10-12 00:40:12,531 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-10-12 05:11:08] 2025-10-12 00:40:12,546 | INFO     | sufficient remaining disk space (1680266493952 B)
[2025-10-12 05:11:08] 2025-10-12 00:40:12,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 05:11:08] 2025-10-12 00:40:12,547 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 05:11:08] 2025-10-12 00:40:12,547 | INFO     | update_server=False
[2025-10-12 05:11:08] 2025-10-12 00:40:12,547 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 05:11:08] 2025-10-12 00:40:12,547 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:11:08] 2025-10-12 00:40:12,547 | INFO     | aborting loop
[2025-10-12 05:11:08] 2025-10-12 00:40:12,548 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 05:11:08] 2025-10-12 00:40:12,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 05:11:08] 2025-10-12 00:40:13,274 | INFO     | all data control threads have been joined
[2025-10-12 05:11:08] 2025-10-12 00:40:13,552 | INFO     | [job] retrieve thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:13,553 | INFO     | [job] job monitor thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:13,553 | INFO     | [job] queue monitor thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:13,683 | INFO     | all payload control threads have been joined
[2025-10-12 05:11:08] 2025-10-12 00:40:13,937 | INFO     | [data] copytool_in thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:14,168 | INFO     | [job] validate thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:14,171 | INFO     | all job control threads have been joined
[2025-10-12 05:11:08] 2025-10-12 00:40:14,280 | INFO     | [data] control thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:14,351 | INFO     | [payload] validate_post thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:14,461 | INFO     | [payload] failed_post thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:14,514 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:14,523 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:14,623 | INFO     | [data] copytool_out thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:14,682 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:14,689 | INFO     | [payload] control thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:14,956 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:15,176 | INFO     | [job] control thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:15,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 05:11:08] 2025-10-12 00:40:19,797 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 05:11:08] 2025-10-12 00:40:43,369 | INFO     | PID=861450 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 05:11:08] 2025-10-12 00:40:43,369 | INFO     | .. there are 2 such processes running
[2025-10-12 05:11:08] 2025-10-12 00:40:43,369 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 05:11:08] 2025-10-12 00:40:43,369 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 05:11:08] 2025-10-12 00:40:43,369 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 05:11:08] 2025-10-12 00:41:05,945 | INFO     | [monitor] cgroup control has ended
[2025-10-12 05:11:08] 2025-10-12 00:41:06,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22610574776128)>', '<ExcThread(monitor, started 22610335201024)>']
[2025-10-12 05:11:08] 2025-10-12 00:41:06,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 05:11:08] 2025-10-12 00:41:06,462 | INFO     | [monitor] control thread has ended
[2025-10-12 05:11:08] 2025-10-12 00:41:11,307 | INFO     | all workflow threads have been joined
[2025-10-12 05:11:08] 2025-10-12 00:41:11,308 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 05:11:08] 2025-10-12 00:41:11,308 | INFO     | traces error code: 0
[2025-10-12 05:11:08] 2025-10-12 00:41:11,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 05:11:08] 2025-10-12 00:41:11,419 [wrapper] ==== pilot stdout END ====
[2025-10-12 05:11:08] 2025-10-12 00:41:11,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 05:11:08] 2025-10-12 00:41:11,424 [wrapper] pilotpid: 861450
[2025-10-12 05:11:08] 2025-10-12 00:41:11,426 [wrapper] Pilot exit status: 0
[2025-10-12 05:11:08] 2025-10-12 00:41:11,434 [wrapper] pandaids: 6837705179
[2025-10-12 05:11:08] 2025-10-12 00:41:11,488 [wrapper] cleanup supervisor_pilot 1033365 861451
[2025-10-12 05:11:08] 2025-10-12 00:41:11,490 [wrapper] Test setup, not cleaning
[2025-10-12 05:11:08] 2025-10-12 00:41:11,493 [wrapper] apfmon messages muted
[2025-10-12 05:11:08] 2025-10-12 00:41:11,495 [wrapper] ==== wrapper stdout END ====
[2025-10-12 05:11:08] 2025-10-12 00:41:11,498 [wrapper] ==== wrapper stderr END ====
[2025-10-12 05:11:08]  *** Error codes and diagnostics ***
[2025-10-12 05:11:08]     "exeErrorCode": 0,
[2025-10-12 05:11:08]     "exeErrorDiag": "",
[2025-10-12 05:11:08]     "pilotErrorCode": 0,
[2025-10-12 05:11:08]     "pilotErrorDiag": "",
[2025-10-12 05:11:08]  *** Listing of results directory ***
[2025-10-12 05:11:08] total 415220
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc      5112 Oct 10 19:16 queuedata.json
[2025-10-12 05:11:08] -rwx------ 1 boinc boinc     36292 Oct 10 19:17 runpilot2-wrapper.sh
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc    557409 Oct 10 19:17 pilot3.tar.gz
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc       100 Oct 11 23:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 05:11:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 23:20 run_atlas
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc       105 Oct 11 23:20 job.xml
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc      6421 Oct 11 23:20 init_data.xml
[2025-10-12 05:11:08] -rw-r--r-- 2 boinc boinc 219538414 Oct 11 23:20 EVNT.46676267._001714.pool.root.1
[2025-10-12 05:11:08] -rw-r--r-- 2 boinc boinc     15120 Oct 11 23:20 start_atlas.sh
[2025-10-12 05:11:08] drwxrwx--x 2 boinc boinc      4096 Oct 11 23:20 shared
[2025-10-12 05:11:08] -rw-r--r-- 2 boinc boinc    569679 Oct 11 23:20 input.tar.gz
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc         0 Oct 11 23:20 boinc_lockfile
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc      2549 Oct 11 23:20 pandaJob.out
[2025-10-12 05:11:08] -rw------- 1 boinc boinc    975528 Oct 11 23:20 agis_schedconf.cvmfs.json
[2025-10-12 05:11:08] drwx------ 5 boinc boinc      4096 Oct 11 23:20 pilot3
[2025-10-12 05:11:08] -rw------- 1 boinc boinc 197581515 Oct 12 02:39 HITS.46676269._042326.pool.root.1
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc       528 Oct 12 02:39 boinc_task_state.xml
[2025-10-12 05:11:08] -rw------- 1 boinc boinc      1032 Oct 12 02:39 memory_monitor_summary.json
[2025-10-12 05:11:08] -rw------- 1 boinc boinc        95 Oct 12 02:39 pilot_heartbeat.json
[2025-10-12 05:11:08] -rw------- 1 boinc boinc   1560580 Oct 12 02:40 agis_ddmendpoints.agis.ALL.json
[2025-10-12 05:11:08] -rw------- 1 boinc boinc    379338 Oct 12 02:40 log.46676269._042326.job.log.tgz.1
[2025-10-12 05:11:08] -rw------- 1 boinc boinc      7834 Oct 12 02:40 heartbeat.json
[2025-10-12 05:11:08] -rw------- 1 boinc boinc      4833 Oct 12 02:41 pilotlog.txt
[2025-10-12 05:11:08] -rw------- 1 boinc boinc   1703285 Oct 12 02:41 log.46676269._042326.job.log.1
[2025-10-12 05:11:08] -rw------- 1 boinc boinc       357 Oct 12 02:41 output.list
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc       620 Oct 12 02:41 runtime_log
[2025-10-12 05:11:08] -rw------- 1 boinc boinc   2099200 Oct 12 02:41 result.tar.gz
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc      9070 Oct 12 02:41 runtime_log.err
[2025-10-12 05:11:08] -rw------- 1 boinc boinc       664 Oct 12 02:41 qWSNDmzuVR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgzdNDmWt3rTo.diag
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc        26 Oct 12 05:11 wrapper_checkpoint.txt
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc      8192 Oct 12 05:11 boinc_mmap_file
[2025-10-12 05:11:08] -rw-r--r-- 1 boinc boinc     20903 Oct 12 05:11 stderr.txt
[2025-10-12 05:11:08] HITS file was successfully produced:
[2025-10-12 05:11:08] -rw------- 1 boinc boinc 197581515 Oct 12 02:39 shared/HITS.pool.root.1
[2025-10-12 05:11:08]  *** Contents of shared directory: ***
[2025-10-12 05:11:08] total 409980
[2025-10-12 05:11:08] -rw-r--r-- 2 boinc boinc 219538414 Oct 11 23:20 ATLAS.root_0
[2025-10-12 05:11:08] -rw-r--r-- 2 boinc boinc     15120 Oct 11 23:20 start_atlas.sh
[2025-10-12 05:11:08] -rw-r--r-- 2 boinc boinc    569679 Oct 11 23:20 input.tar.gz
[2025-10-12 05:11:08] -rw------- 1 boinc boinc 197581515 Oct 12 02:39 HITS.pool.root.1
[2025-10-12 05:11:08] -rw------- 1 boinc boinc   2099200 Oct 12 02:41 result.tar.gz
05:11:10 (857769): run_atlas exited; CPU time 46165.859527
05:11:10 (857769): called boinc_finish(0)

</stderr_txt>
]]>

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