Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:50 (2116534): wrapper (7.7.26015): starting
00:01:50 (2116534): wrapper: running run_atlas (--nthreads 9)
[2025-10-11 00:01:50] Arguments: --nthreads 9
[2025-10-11 00:01:50] Threads: 9
[2025-10-11 00:01:50] Checking for CVMFS
[2025-10-11 00:01:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 00:01:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 00:01:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 00:01:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 00:01:52] 2.13.2.0 1756961 92481 286376 151571 3 319 25417180 32935937 22190 16776704 0 97069721 99.687 80331368 29863 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-11 00:01:52] CVMFS is ok
[2025-10-11 00:01:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 00:01:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 00:01:52] Further information can be found at the LHC@home message board.
[2025-10-11 00:01:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 00:01:52] Checking for apptainer binary...
[2025-10-11 00:01:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 00:01:52] Running /usr/bin/apptainer --version
[2025-10-11 00:01:52] apptainer version 1.4.3-1.el9
[2025-10-11 00:01:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 00:01:54] c-5-5.aglt2.org
[2025-10-11 00:01:54] apptainer works
[2025-10-11 00:01:54] Set ATHENA_PROC_NUMBER=9
[2025-10-11 00:01:54] Set ATHENA_CORE_NUMBER=9
[2025-10-11 00:01:54] Starting ATLAS job with PandaID=6837785176
[2025-10-11 00:01:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 08:07:38]  *** The last 200 lines of the pilot log: ***
[2025-10-11 08:07:39] 2025-10-11 12:06:37,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-11 08:07:39] 2025-10-11 12:06:39,206 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-11 08:07:39] 2025-10-11 12:06:39,332 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1554750000005
[2025-10-11 08:07:39] 2025-10-11 12:06:39,343 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6837785176/memory_monitor_summary.json (trf name=prmon)
[2025-10-11 08:07:39] 2025-10-11 12:06:39,343 | INFO     | extracted standard info from prmon json
[2025-10-11 08:07:39] 2025-10-11 12:06:39,344 | INFO     | extracted standard memory fields from prmon json
[2025-10-11 08:07:39] 2025-10-11 12:06:39,344 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-11 08:07:39] 2025-10-11 12:06:39,344 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 08:07:39] 2025-10-11 12:06:39,344 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 08:07:39] 2025-10-11 12:06:39,353 | INFO     | fitting pss+swap vs Time
[2025-10-11 08:07:39] 2025-10-11 12:06:39,354 | INFO     | sum of square deviations: 32815272686.51586
[2025-10-11 08:07:39] 2025-10-11 12:06:39,359 | INFO     | sum of deviations: 73102859655.58337
[2025-10-11 08:07:39] 2025-10-11 12:06:39,359 | INFO     | mean x: 1760169898.3424947
[2025-10-11 08:07:39] 2025-10-11 12:06:39,360 | INFO     | mean y: 2095017.4038054969
[2025-10-11 08:07:39] 2025-10-11 12:06:39,360 | INFO     | -- intersect: -3919050306.5351634
[2025-10-11 08:07:39] 2025-10-11 12:06:39,360 | INFO     | intersect: -3919050306.5351634
[2025-10-11 08:07:39] 2025-10-11 12:06:39,360 | INFO     | chi2: 6.166627404045931
[2025-10-11 08:07:39] 2025-10-11 12:06:39,361 | INFO     | sum of square deviations: 31785665580.92312
[2025-10-11 08:07:39] 2025-10-11 12:06:39,367 | INFO     | sum of deviations: 136474563973.38466
[2025-10-11 08:07:39] 2025-10-11 12:06:39,367 | INFO     | mean x: 1760169745.8461537
[2025-10-11 08:07:39] 2025-10-11 12:06:39,367 | INFO     | mean y: 2104360.324786325
[2025-10-11 08:07:39] 2025-10-11 12:06:39,367 | INFO     | -- intersect: -7555339984.262719
[2025-10-11 08:07:39] 2025-10-11 12:06:39,367 | INFO     | intersect: -7555339984.262719
[2025-10-11 08:07:39] 2025-10-11 12:06:39,368 | INFO     | chi2: 4.625549451166871
[2025-10-11 08:07:39] 2025-10-11 12:06:39,368 | INFO     | current chi2=4.625549451166871 (change=24.990612402947466 %)
[2025-10-11 08:07:39] 2025-10-11 12:06:39,368 | INFO     | right removable region: 467
[2025-10-11 08:07:39] 2025-10-11 12:06:39,369 | INFO     | sum of square deviations: 31785566760.923103
[2025-10-11 08:07:39] 2025-10-11 12:06:39,374 | INFO     | sum of deviations: -42192265993.30769
[2025-10-11 08:07:39] 2025-10-11 12:06:39,375 | INFO     | mean x: 1760170050.8461537
[2025-10-11 08:07:39] 2025-10-11 12:06:39,375 | INFO     | mean y: 2112072.94017094
[2025-10-11 08:07:39] 2025-10-11 12:06:39,375 | INFO     | -- intersect: 2338567594.949496
[2025-10-11 08:07:39] 2025-10-11 12:06:39,375 | INFO     | intersect: 2338567594.949496
[2025-10-11 08:07:39] 2025-10-11 12:06:39,376 | INFO     | chi2: 3.0364503492705186
[2025-10-11 08:07:39] 2025-10-11 12:06:39,376 | INFO     | current chi2=3.0364503492705186 (change=50.75995109939186 %)
[2025-10-11 08:07:39] 2025-10-11 12:06:39,377 | INFO     | sum of square deviations: 30777628685.317505
[2025-10-11 08:07:39] 2025-10-11 12:06:39,382 | INFO     | sum of deviations: -95683204384.50758
[2025-10-11 08:07:39] 2025-10-11 12:06:39,382 | INFO     | mean x: 1760170203.349892
[2025-10-11 08:07:39] 2025-10-11 12:06:39,382 | INFO     | mean y: 2120160.848812095
[2025-10-11 08:07:39] 2025-10-11 12:06:39,382 | INFO     | -- intersect: 5474235216.905496
[2025-10-11 08:07:39] 2025-10-11 12:06:39,383 | INFO     | intersect: 5474235216.905496
[2025-10-11 08:07:39] 2025-10-11 12:06:39,383 | INFO     | chi2: 2.361290505476774
[2025-10-11 08:07:39] 2025-10-11 12:06:39,383 | INFO     | current chi2=2.361290505476774 (change=22.235168243602136 %)
[2025-10-11 08:07:39] 2025-10-11 12:06:39,383 | INFO     | left removable region: 20
[2025-10-11 08:07:39] 2025-10-11 12:06:39,384 | INFO     | sum of square deviations: 27695944307.011047
[2025-10-11 08:07:39] 2025-10-11 12:06:39,389 | INFO     | sum of deviations: -65315175076.062614
[2025-10-11 08:07:39] 2025-10-11 12:06:39,389 | INFO     | mean x: 1760170325.360179
[2025-10-11 08:07:39] 2025-10-11 12:06:39,389 | INFO     | mean y: 2136246.782997763
[2025-10-11 08:07:39] 2025-10-11 12:06:39,389 | INFO     | -- intersect: 4153135096.657466
[2025-10-11 08:07:39] 2025-10-11 12:06:39,389 | INFO     | intersect: 4153135096.657466
[2025-10-11 08:07:39] 2025-10-11 12:06:39,390 | INFO     | chi2: 0.45175090085114394
[2025-10-11 08:07:39] 2025-10-11 12:06:39,390 | INFO     | -- intersect: 4153135096.657466
[2025-10-11 08:07:39] 2025-10-11 12:06:39,390 | INFO     | current memory leak: -2.36 B/s (using 447 data points, chi2=0.45)
[2025-10-11 08:07:39] 2025-10-11 12:06:39,391 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2025-10-11 08:07:39] 2025-10-11 12:06:39,391 | INFO     | ..............................
[2025-10-11 08:07:39] 2025-10-11 12:06:39,391 | INFO     | . Timing measurements:
[2025-10-11 08:07:39] 2025-10-11 12:06:39,392 | INFO     | . get job = 0 s
[2025-10-11 08:07:39] 2025-10-11 12:06:39,392 | INFO     | . initial setup = 6 s
[2025-10-11 08:07:39] 2025-10-11 12:06:39,392 | INFO     | . payload setup = 38 s
[2025-10-11 08:07:39] 2025-10-11 12:06:39,392 | INFO     | . stage-in = 0 s
[2025-10-11 08:07:39] 2025-10-11 12:06:39,392 | INFO     | . payload execution = 28858 s
[2025-10-11 08:07:39] 2025-10-11 12:06:39,392 | INFO     | . stage-out = 10 s
[2025-10-11 08:07:39] 2025-10-11 12:06:39,392 | INFO     | . log creation = 2 s
[2025-10-11 08:07:39] 2025-10-11 12:06:39,392 | INFO     | ..............................
[2025-10-11 08:07:39] 2025-10-11 12:06:39,533 | INFO     | PID=2123258 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:07:39] 2025-10-11 12:06:39,534 | INFO     | .. there are 40 such processes running
[2025-10-11 08:07:39] 2025-10-11 12:06:40,152 | INFO     | 
[2025-10-11 08:07:39] 2025-10-11 12:06:40,153 | INFO     | job summary report
[2025-10-11 08:07:39] 2025-10-11 12:06:40,153 | INFO     | --------------------------------------------------
[2025-10-11 08:07:39] 2025-10-11 12:06:40,153 | INFO     | PanDA job id: 6837785176
[2025-10-11 08:07:39] 2025-10-11 12:06:40,153 | INFO     | task id: 46676269
[2025-10-11 08:07:39] 2025-10-11 12:06:40,153 | INFO     | errors: (none)
[2025-10-11 08:07:39] 2025-10-11 12:06:40,153 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 08:07:39] 2025-10-11 12:06:40,153 | INFO     | pilot state: finished 
[2025-10-11 08:07:39] 2025-10-11 12:06:40,153 | INFO     | transexitcode: 0
[2025-10-11 08:07:39] 2025-10-11 12:06:40,153 | INFO     | exeerrorcode: 0
[2025-10-11 08:07:39] 2025-10-11 12:06:40,154 | INFO     | exeerrordiag: 
[2025-10-11 08:07:39] 2025-10-11 12:06:40,154 | INFO     | exitcode: 0
[2025-10-11 08:07:39] 2025-10-11 12:06:40,154 | INFO     | exitmsg: OK
[2025-10-11 08:07:39] 2025-10-11 12:06:40,154 | INFO     | cpuconsumptiontime: 46963 s
[2025-10-11 08:07:39] 2025-10-11 12:06:40,154 | INFO     | nevents: 400
[2025-10-11 08:07:39] 2025-10-11 12:06:40,154 | INFO     | neventsw: 0
[2025-10-11 08:07:39] 2025-10-11 12:06:40,154 | INFO     | pid: 2140113
[2025-10-11 08:07:39] 2025-10-11 12:06:40,154 | INFO     | pgrp: 2140113
[2025-10-11 08:07:39] 2025-10-11 12:06:40,154 | INFO     | corecount: 9
[2025-10-11 08:07:39] 2025-10-11 12:06:40,154 | INFO     | event service: False
[2025-10-11 08:07:39] 2025-10-11 12:06:40,155 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2349175, 34: 2349203, 28902: 2386861, 28904: 2386988, 28915: 2396042, 28919: 2396098, 28968: 2396292}
[2025-10-11 08:07:39] 2025-10-11 12:06:40,155 | INFO     | --------------------------------------------------
[2025-10-11 08:07:39] 2025-10-11 12:06:40,155 | INFO     | 
[2025-10-11 08:07:39] 2025-10-11 12:06:40,155 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-11 08:07:39] 2025-10-11 12:06:40,375 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,376 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,376 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,377 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,377 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,377 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 08:07:39] 2025-10-11 12:06:40,377 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,377 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 08:07:39] 2025-10-11 12:06:40,377 | INFO     | job 6837785176 has completed (purged errors)
[2025-10-11 08:07:39] 2025-10-11 12:06:40,377 | INFO     | overall cleanup function is called
[2025-10-11 08:07:39] 2025-10-11 12:06:41,440 | INFO     | --- collectZombieJob: --- 10, [2140113]
[2025-10-11 08:07:39] 2025-10-11 12:06:41,440 | INFO     | zombie collector waiting for pid 2140113
[2025-10-11 08:07:39] 2025-10-11 12:06:41,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 08:07:39] 2025-10-11 12:06:41,441 | INFO     | collected zombie processes
[2025-10-11 08:07:39] 2025-10-11 12:06:41,441 | INFO     | will attempt to kill all subprocesses of pid=2140113
[2025-10-11 08:07:39] 2025-10-11 12:06:44,698 | INFO     | process IDs to be killed: [2140113] (in reverse order)
[2025-10-11 08:07:39] 2025-10-11 12:06:46,058 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 08:07:39] 2025-10-11 12:06:46,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 08:07:39] 2025-10-11 12:06:46,246 | INFO     | did not find any defunct processes belonging to 2140113
[2025-10-11 08:07:39] 2025-10-11 12:06:46,434 | INFO     | did not find any defunct processes belonging to 2140113
[2025-10-11 08:07:39] 2025-10-11 12:06:46,435 | INFO     | ready for new job
[2025-10-11 08:07:39] 2025-10-11 12:06:46,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 08:07:39] 2025-10-11 12:06:46,469 | INFO     | ***************************************
[2025-10-11 08:07:39] 2025-10-11 12:06:46,469 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 08:07:39] 2025-10-11 12:06:46,470 | INFO     | ***************************************
[2025-10-11 08:07:39] 2025-10-11 12:06:46,470 | INFO     | 
[2025-10-11 08:07:39] 2025-10-11 12:06:46,491 | INFO     | architecture information:
[2025-10-11 08:07:39] 2025-10-11 12:06:46,516 | INFO     | executing command: cat /etc/os-release
[2025-10-11 08:07:39] 2025-10-11 12:06:46,672 | INFO     | cat /etc/os-release:
[2025-10-11 08:07:39] NAME="CentOS Linux"
[2025-10-11 08:07:39] VERSION="7 (Core)"
[2025-10-11 08:07:39] ID="centos"
[2025-10-11 08:07:39] ID_LIKE="rhel fedora"
[2025-10-11 08:07:39] VERSION_ID="7"
[2025-10-11 08:07:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 08:07:39] ANSI_COLOR="0;31"
[2025-10-11 08:07:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 08:07:39] HOME_URL="https://www.centos.org/"
[2025-10-11 08:07:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 08:07:39] 
[2025-10-11 08:07:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 08:07:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 08:07:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 08:07:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 08:07:39] 
[2025-10-11 08:07:39] 2025-10-11 12:06:46,673 | INFO     | ***************************************
[2025-10-11 08:07:39] 2025-10-11 12:06:47,176 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-11 08:07:39] 2025-10-11 12:06:47,324 | INFO     | sufficient remaining disk space (75671535616 B)
[2025-10-11 08:07:39] 2025-10-11 12:06:47,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 08:07:39] 2025-10-11 12:06:47,324 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 08:07:39] 2025-10-11 12:06:47,324 | INFO     | update_server=False
[2025-10-11 08:07:39] 2025-10-11 12:06:47,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 08:07:39] 2025-10-11 12:06:47,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:07:39] 2025-10-11 12:06:47,346 | INFO     | aborting loop
[2025-10-11 08:07:39] 2025-10-11 12:06:47,352 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 08:07:39] 2025-10-11 12:06:47,376 | INFO     | all job control threads have been joined
[2025-10-11 08:07:39] 2025-10-11 12:06:47,504 | INFO     | all payload control threads have been joined
[2025-10-11 08:07:39] 2025-10-11 12:06:47,809 | INFO     | all data control threads have been joined
[2025-10-11 08:07:39] 2025-10-11 12:06:48,330 | INFO     | [job] retrieve thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:48,351 | INFO     | [job] job monitor thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:48,362 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:48,382 | INFO     | [job] control thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:48,512 | INFO     | [payload] control thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:48,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 08:07:39] 2025-10-11 12:06:48,667 | INFO     | [payload] validate_post thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:48,810 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:48,815 | INFO     | [data] control thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:49,176 | INFO     | [payload] failed_post thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:49,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 08:07:39] 2025-10-11 12:06:49,336 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:49,342 | INFO     | [job] validate thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:49,671 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:49,713 | INFO     | [data] copytool_in thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:50,263 | INFO     | [job] queue monitor thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:50,533 | INFO     | [monitor] cgroup control has ended
[2025-10-11 08:07:39] 2025-10-11 12:06:50,628 | INFO     | [data] copytool_out thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:51,369 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 08:07:39] 2025-10-11 12:06:52,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727703349056)>', '<ExcThread(monitor, started 139727214728960)>']
[2025-10-11 08:07:39] 2025-10-11 12:06:57,634 | INFO     | all workflow threads have been joined
[2025-10-11 08:07:39] 2025-10-11 12:06:57,634 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 08:07:39] 2025-10-11 12:06:57,635 | INFO     | traces error code: 0
[2025-10-11 08:07:39] 2025-10-11 12:06:57,635 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 08:07:39] 2025-10-11 12:07:16,085 | INFO     | PID=2123258 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 08:07:39] 2025-10-11 12:07:16,086 | INFO     | .. there are 40 such processes running
[2025-10-11 08:07:39] 2025-10-11 12:07:16,086 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 08:07:39] 2025-10-11 12:07:16,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 08:07:39] 2025-10-11 12:07:16,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 08:07:39] 2025-10-11 12:07:16,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 08:07:39] 2025-10-11 12:07:16,087 | INFO     | [monitor] control thread has ended
[2025-10-11 08:07:39] 2025-10-11 12:07:16,892 [wrapper] ==== pilot stdout END ====
[2025-10-11 08:07:39] 2025-10-11 12:07:16,954 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 08:07:39] 2025-10-11 12:07:16,993 [wrapper] pilotpid: 2123258
[2025-10-11 08:07:39] 2025-10-11 12:07:17,079 [wrapper] Pilot exit status: 0
[2025-10-11 08:07:39] 2025-10-11 12:07:17,212 [wrapper] pandaids: 6837785176
[2025-10-11 08:07:39] 2025-10-11 12:07:17,961 [wrapper] cleanup supervisor_pilot 3796211 2123259
[2025-10-11 08:07:39] 2025-10-11 12:07:18,005 [wrapper] Test setup, not cleaning
[2025-10-11 08:07:39] 2025-10-11 12:07:18,064 [wrapper] apfmon messages muted
[2025-10-11 08:07:39] 2025-10-11 12:07:18,104 [wrapper] ==== wrapper stdout END ====
[2025-10-11 08:07:39] 2025-10-11 12:07:18,129 [wrapper] ==== wrapper stderr END ====
[2025-10-11 08:07:39]  *** Error codes and diagnostics ***
[2025-10-11 08:07:39]     "exeErrorCode": 0,
[2025-10-11 08:07:39]     "exeErrorDiag": "",
[2025-10-11 08:07:39]     "pilotErrorCode": 0,
[2025-10-11 08:07:39]     "pilotErrorDiag": "",
[2025-10-11 08:07:39]  *** Listing of results directory ***
[2025-10-11 08:07:39] total 409828
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 16:46 pilot3.tar.gz
[2025-10-11 08:07:39] -rwx------. 1 boincer umatlas     36292 Oct 10 16:48 runpilot2-wrapper.sh
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 16:48 queuedata.json
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas       100 Oct 11 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 08:07:39] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 11 00:01 run_atlas
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas       105 Oct 11 00:01 job.xml
[2025-10-11 08:07:39] -rw-r--r--. 2 boincer umatlas 222171360 Oct 11 00:01 EVNT.46676267._001820.pool.root.1
[2025-10-11 08:07:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:01 start_atlas.sh
[2025-10-11 08:07:39] drwxrwx--x. 2 boincer umatlas      4096 Oct 11 00:01 shared
[2025-10-11 08:07:39] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 00:01 input.tar.gz
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas         0 Oct 11 00:01 boinc_lockfile
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas      2550 Oct 11 00:01 pandaJob.out
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas    975509 Oct 11 00:02 agis_schedconf.cvmfs.json
[2025-10-11 08:07:39] drwx------. 5 boincer umatlas      4096 Oct 11 00:02 pilot3
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas      6659 Oct 11 08:00 init_data.xml
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas 185290126 Oct 11 08:03 HITS.46676269._045007.pool.root.1
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas       531 Oct 11 08:03 boinc_task_state.xml
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas      1042 Oct 11 08:05 memory_monitor_summary.json
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas   1560580 Oct 11 08:05 agis_ddmendpoints.agis.ALL.json
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas    665265 Oct 11 08:05 log.46676269._045007.job.log.tgz.1
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas        95 Oct 11 08:06 pilot_heartbeat.json
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas      7826 Oct 11 08:06 heartbeat.json
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas       823 Oct 11 08:07 pilotlog.txt
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas   3487168 Oct 11 08:07 log.46676269._045007.job.log.1
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas       357 Oct 11 08:07 output.list
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas       620 Oct 11 08:07 runtime_log
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas   4167680 Oct 11 08:07 result.tar.gz
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas       655 Oct 11 08:07 WhWKDmTDZR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJQeNDmP3rHqn.diag
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas      8689 Oct 11 08:07 runtime_log.err
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 08:07 boinc_mmap_file
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas        28 Oct 11 08:07 wrapper_checkpoint.txt
[2025-10-11 08:07:39] -rw-r--r--. 1 boincer umatlas     21313 Oct 11 08:07 stderr.txt
[2025-10-11 08:07:39] HITS file was successfully produced:
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas 185290126 Oct 11 08:03 shared/HITS.pool.root.1
[2025-10-11 08:07:39]  *** Contents of shared directory: ***
[2025-10-11 08:07:39] total 402568
[2025-10-11 08:07:39] -rw-r--r--. 2 boincer umatlas 222171360 Oct 11 00:01 ATLAS.root_0
[2025-10-11 08:07:39] -rw-r--r--. 2 boincer umatlas     15120 Oct 11 00:01 start_atlas.sh
[2025-10-11 08:07:39] -rw-r--r--. 2 boincer umatlas    569679 Oct 11 00:01 input.tar.gz
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas 185290126 Oct 11 08:03 HITS.pool.root.1
[2025-10-11 08:07:39] -rw-------. 1 boincer umatlas   4167680 Oct 11 08:07 result.tar.gz
08:07:41 (2116534): run_atlas exited; CPU time 48199.756789
08:07:41 (2116534): called boinc_finish(0)

</stderr_txt>
]]>

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