Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:18:18 (2790407): wrapper (7.7.26015): starting
10:18:18 (2790407): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 10:18:18] Arguments: --nthreads 4
[2025-10-12 10:18:18] Threads: 4
[2025-10-12 10:18:18] Checking for CVMFS
[2025-10-12 10:18:18] No cvmfs_config command found, will try listing directly
[2025-10-12 10:18:18] CVMFS is ok
[2025-10-12 10:18:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:18:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:18:18] Further information can be found at the LHC@home message board.
[2025-10-12 10:18:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:18:18] Checking for apptainer binary...
[2025-10-12 10:18:18] which: no apptainer in ((null))
[2025-10-12 10:18:18] apptainer is not installed, using version from CVMFS
[2025-10-12 10:18:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:18:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-10-12 10:18:18] apptainer works
[2025-10-12 10:18:18] Set ATHENA_PROC_NUMBER=4
[2025-10-12 10:18:18] Set ATHENA_CORE_NUMBER=4
[2025-10-12 10:18:18] Starting ATLAS job with PandaID=6837785311
[2025-10-12 10:18:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:17:45]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:17:45] 2025-10-12 11:13:43,661 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 13:17:45] 2025-10-12 11:13:43,670 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2889.04509375
[2025-10-12 13:17:45] 2025-10-12 11:13:43,682 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6837785311/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:17:45] 2025-10-12 11:13:43,683 | INFO     | extracted standard info from prmon json
[2025-10-12 13:17:45] 2025-10-12 11:13:43,683 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:17:45] 2025-10-12 11:13:43,683 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:17:45] 2025-10-12 11:13:43,684 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:17:45] 2025-10-12 11:13:43,684 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:17:45] 2025-10-12 11:13:43,687 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:17:45] 2025-10-12 11:13:43,688 | INFO     | sum of square deviations: 1577789583.0
[2025-10-12 13:17:45] 2025-10-12 11:13:43,689 | INFO     | sum of deviations: 16178215406.000002
[2025-10-12 13:17:45] 2025-10-12 11:13:43,689 | INFO     | mean x: 1760262350.5
[2025-10-12 13:17:45] 2025-10-12 11:13:43,689 | INFO     | mean y: 2326177.6860465114
[2025-10-12 13:17:45] 2025-10-12 11:13:43,689 | INFO     | -- intersect: -18046914218.053642
[2025-10-12 13:17:45] 2025-10-12 11:13:43,689 | INFO     | intersect: -18046914218.053642
[2025-10-12 13:17:45] 2025-10-12 11:13:43,689 | INFO     | chi2: 1.3538945063753463
[2025-10-12 13:17:45] 2025-10-12 11:13:43,690 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 13:17:45] 2025-10-12 11:13:43,690 | INFO     | sum of deviations: 15706301655.0
[2025-10-12 13:17:45] 2025-10-12 11:13:43,691 | INFO     | mean x: 1760262198.0
[2025-10-12 13:17:45] 2025-10-12 11:13:43,691 | INFO     | mean y: 2325639.6886227545
[2025-10-12 13:17:45] 2025-10-12 11:13:43,691 | INFO     | -- intersect: -19141954110.147797
[2025-10-12 13:17:45] 2025-10-12 11:13:43,691 | INFO     | intersect: -19141954110.147797
[2025-10-12 13:17:45] 2025-10-12 11:13:43,691 | INFO     | chi2: 1.3550115258465552
[2025-10-12 13:17:45] 2025-10-12 11:13:43,691 | INFO     | current chi2=1.3550115258465552 (change=-0.0825041734011753 %)
[2025-10-12 13:17:45] 2025-10-12 11:13:43,691 | INFO     | right removable region: 166
[2025-10-12 13:17:45] 2025-10-12 11:13:43,692 | INFO     | sum of square deviations: 1444149868.0
[2025-10-12 13:17:45] 2025-10-12 11:13:43,692 | INFO     | sum of deviations: -6063732571.999999
[2025-10-12 13:17:45] 2025-10-12 11:13:43,693 | INFO     | mean x: 1760262503.0
[2025-10-12 13:17:45] 2025-10-12 11:13:43,693 | INFO     | mean y: 2351187.233532934
[2025-10-12 13:17:45] 2025-10-12 11:13:43,693 | INFO     | -- intersect: 7393385394.433519
[2025-10-12 13:17:45] 2025-10-12 11:13:43,693 | INFO     | intersect: 7393385394.433519
[2025-10-12 13:17:45] 2025-10-12 11:13:43,693 | INFO     | chi2: 0.009450816976247181
[2025-10-12 13:17:45] 2025-10-12 11:13:43,693 | INFO     | current chi2=0.009450816976247181 (change=99.30195322222342 %)
[2025-10-12 13:17:45] 2025-10-12 11:13:43,693 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 13:17:45] 2025-10-12 11:13:43,694 | INFO     | sum of deviations: -5970950748.5
[2025-10-12 13:17:45] 2025-10-12 11:13:43,694 | INFO     | mean x: 1760262655.5
[2025-10-12 13:17:45] 2025-10-12 11:13:43,694 | INFO     | mean y: 2351068.0679012346
[2025-10-12 13:17:45] 2025-10-12 11:13:43,695 | INFO     | -- intersect: 7975209364.550928
[2025-10-12 13:17:45] 2025-10-12 11:13:43,695 | INFO     | intersect: 7975209364.550928
[2025-10-12 13:17:45] 2025-10-12 11:13:43,695 | INFO     | chi2: 0.009003234513416713
[2025-10-12 13:17:45] 2025-10-12 11:13:43,695 | INFO     | current chi2=0.009003234513416713 (change=4.735912926420874 %)
[2025-10-12 13:17:45] 2025-10-12 11:13:43,695 | INFO     | left removable region: 20
[2025-10-12 13:17:45] 2025-10-12 11:13:43,695 | INFO     | sum of square deviations: 964976232.5
[2025-10-12 13:17:45] 2025-10-12 11:13:43,696 | INFO     | sum of deviations: -4617818400.999997
[2025-10-12 13:17:45] 2025-10-12 11:13:43,696 | INFO     | mean x: 1760262777.5
[2025-10-12 13:17:45] 2025-10-12 11:13:43,696 | INFO     | mean y: 2349671.7534246575
[2025-10-12 13:17:45] 2025-10-12 11:13:43,696 | INFO     | -- intersect: 8425949726.10488
[2025-10-12 13:17:45] 2025-10-12 11:13:43,696 | INFO     | intersect: 8425949726.10488
[2025-10-12 13:17:45] 2025-10-12 11:13:43,697 | INFO     | chi2: 0.008606186352200361
[2025-10-12 13:17:45] 2025-10-12 11:13:43,697 | INFO     | -- intersect: 8425949726.10488
[2025-10-12 13:17:45] 2025-10-12 11:13:43,697 | INFO     | current memory leak: -4.79 B/s (using 146 data points, chi2=0.01)
[2025-10-12 13:17:45] 2025-10-12 11:13:43,697 | INFO     | could have reported an average CPU frequency of 2707 MHz (9 samples)
[2025-10-12 13:17:45] 2025-10-12 11:13:43,698 | INFO     | ..............................
[2025-10-12 13:17:45] 2025-10-12 11:13:43,698 | INFO     | . Timing measurements:
[2025-10-12 13:17:45] 2025-10-12 11:13:43,698 | INFO     | . get job = 0 s
[2025-10-12 13:17:45] 2025-10-12 11:13:43,698 | INFO     | . initial setup = 1 s
[2025-10-12 13:17:45] 2025-10-12 11:13:43,698 | INFO     | . payload setup = 5 s
[2025-10-12 13:17:45] 2025-10-12 11:13:43,698 | INFO     | . stage-in = 0 s
[2025-10-12 13:17:45] 2025-10-12 11:13:43,698 | INFO     | . payload execution = 10483 s
[2025-10-12 13:17:45] 2025-10-12 11:13:43,698 | INFO     | . stage-out = 0 s
[2025-10-12 13:17:45] 2025-10-12 11:13:43,698 | INFO     | . log creation = 0 s
[2025-10-12 13:17:45] 2025-10-12 11:13:43,698 | INFO     | ..............................
[2025-10-12 13:17:45] 2025-10-12 11:13:44,178 | INFO     | 
[2025-10-12 13:17:45] 2025-10-12 11:13:44,179 | INFO     | job summary report
[2025-10-12 13:17:45] 2025-10-12 11:13:44,179 | INFO     | --------------------------------------------------
[2025-10-12 13:17:45] 2025-10-12 11:13:44,179 | INFO     | PanDA job id: 6837785311
[2025-10-12 13:17:45] 2025-10-12 11:13:44,179 | INFO     | task id: 46676269
[2025-10-12 13:17:45] 2025-10-12 11:13:44,179 | INFO     | errors: (none)
[2025-10-12 13:17:45] 2025-10-12 11:13:44,179 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:17:45] 2025-10-12 11:13:44,179 | INFO     | pilot state: finished 
[2025-10-12 13:17:45] 2025-10-12 11:13:44,179 | INFO     | transexitcode: 0
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | exeerrorcode: 0
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | exeerrordiag: 
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | exitcode: 0
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | exitmsg: OK
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | cpuconsumptiontime: 40504 s
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | nevents: 400
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | neventsw: 0
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | pid: 2849191
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | pgrp: 2849191
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | corecount: 4
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | event service: False
[2025-10-12 13:17:45] 2025-10-12 11:13:44,180 | INFO     | sizes: {0: 2348703, 1: 2348845, 5: 2349107, 11: 2349163, 10492: 2377997, 10493: 2387017, 10495: 2387201, 10499: 2387459}
[2025-10-12 13:17:45] 2025-10-12 11:13:44,181 | INFO     | --------------------------------------------------
[2025-10-12 13:17:45] 2025-10-12 11:13:44,181 | INFO     | 
[2025-10-12 13:17:45] 2025-10-12 11:13:44,181 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2025-10-12 13:17:45] 2025-10-12 11:13:44,201 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,202 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,202 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,202 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,202 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,202 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:17:45] 2025-10-12 11:13:44,203 | INFO     | job 6837785311 has completed (purged errors)
[2025-10-12 13:17:45] 2025-10-12 11:13:44,204 | INFO     | overall cleanup function is called
[2025-10-12 13:17:45] 2025-10-12 11:13:44,238 | INFO     | PID=2803262 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-12 13:17:45] 2025-10-12 11:13:44,238 | INFO     | .. there are 4 such processes running
[2025-10-12 13:17:45] 2025-10-12 11:13:45,212 | INFO     | --- collectZombieJob: --- 10, [2849191]
[2025-10-12 13:17:45] 2025-10-12 11:13:45,213 | INFO     | zombie collector waiting for pid 2849191
[2025-10-12 13:17:45] 2025-10-12 11:13:45,213 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:17:45] 2025-10-12 11:13:45,213 | INFO     | collected zombie processes
[2025-10-12 13:17:45] 2025-10-12 11:13:45,213 | INFO     | will attempt to kill all subprocesses of pid=2849191
[2025-10-12 13:17:45] 2025-10-12 11:13:45,553 | INFO     | process IDs to be killed: [2849191] (in reverse order)
[2025-10-12 13:17:45] 2025-10-12 11:13:45,655 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:17:45] 2025-10-12 11:13:45,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:17:45] 2025-10-12 11:13:45,666 | INFO     | did not find any defunct processes belonging to 2849191
[2025-10-12 13:17:45] 2025-10-12 11:13:45,677 | INFO     | did not find any defunct processes belonging to 2849191
[2025-10-12 13:17:45] 2025-10-12 11:13:45,678 | INFO     | ready for new job
[2025-10-12 13:17:45] 2025-10-12 11:13:45,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:17:45] 2025-10-12 11:13:45,680 | INFO     | ***************************************
[2025-10-12 13:17:45] 2025-10-12 11:13:45,680 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:17:45] 2025-10-12 11:13:45,680 | INFO     | ***************************************
[2025-10-12 13:17:45] 2025-10-12 11:13:45,680 | INFO     | 
[2025-10-12 13:17:45] 2025-10-12 11:13:45,684 | INFO     | architecture information:
[2025-10-12 13:17:45] 2025-10-12 11:13:45,684 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:17:45] 2025-10-12 11:13:45,699 | INFO     | cat /etc/os-release:
[2025-10-12 13:17:45] NAME="CentOS Linux"
[2025-10-12 13:17:45] VERSION="7 (Core)"
[2025-10-12 13:17:45] ID="centos"
[2025-10-12 13:17:45] ID_LIKE="rhel fedora"
[2025-10-12 13:17:45] VERSION_ID="7"
[2025-10-12 13:17:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:17:45] ANSI_COLOR="0;31"
[2025-10-12 13:17:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:17:45] HOME_URL="https://www.centos.org/"
[2025-10-12 13:17:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:17:45] 
[2025-10-12 13:17:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:17:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:17:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:17:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:17:45] 
[2025-10-12 13:17:45] 2025-10-12 11:13:45,699 | INFO     | ***************************************
[2025-10-12 13:17:45] 2025-10-12 11:13:46,202 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2025-10-12 13:17:45] 2025-10-12 11:13:46,218 | INFO     | sufficient remaining disk space (693131804672 B)
[2025-10-12 13:17:45] 2025-10-12 11:13:46,219 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:17:45] 2025-10-12 11:13:46,219 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:17:45] 2025-10-12 11:13:46,219 | INFO     | update_server=False
[2025-10-12 13:17:45] 2025-10-12 11:13:46,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:17:45] 2025-10-12 11:13:46,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:17:45] 2025-10-12 11:13:46,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:17:45] 2025-10-12 11:13:46,220 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:17:45] 2025-10-12 11:13:46,221 | INFO     | aborting loop
[2025-10-12 13:17:45] 2025-10-12 11:13:46,905 | INFO     | all payload control threads have been joined
[2025-10-12 13:17:45] 2025-10-12 11:13:47,111 | INFO     | all data control threads have been joined
[2025-10-12 13:17:45] 2025-10-12 11:13:47,225 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:47,226 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:47,277 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:47,381 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:47,480 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:47,503 | INFO     | all job control threads have been joined
[2025-10-12 13:17:45] 2025-10-12 11:13:47,679 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:47,910 | INFO     | [payload] control thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:48,116 | INFO     | [data] control thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:48,226 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:48,488 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:48,508 | INFO     | [job] control thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:48,570 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:48,583 | INFO     | [job] validate thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:48,805 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:17:45] 2025-10-12 11:13:49,810 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:50,227 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:13:57,131 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:17:45] 2025-10-12 11:13:58,136 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:17:45] 2025-10-12 11:14:16,734 | INFO     | PID=2803262 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:17:45] 2025-10-12 11:14:16,734 | INFO     | .. there are 4 such processes running
[2025-10-12 13:17:45] 2025-10-12 11:14:16,734 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:17:45] 2025-10-12 11:14:16,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:17:45] 2025-10-12 11:14:16,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:17:45] 2025-10-12 11:14:45,171 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:17:45] 2025-10-12 11:14:46,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22420101584704)>', '<ExcThread(monitor, started 22419660072704)>']
[2025-10-12 13:17:45] 2025-10-12 11:14:47,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:17:45] 2025-10-12 11:14:47,845 | INFO     | [monitor] control thread has ended
[2025-10-12 13:17:45] 2025-10-12 11:14:51,909 | INFO     | all workflow threads have been joined
[2025-10-12 13:17:45] 2025-10-12 11:14:51,910 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:17:45] 2025-10-12 11:14:51,910 | INFO     | traces error code: 0
[2025-10-12 13:17:45] 2025-10-12 11:14:51,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:17:45] 2025-10-12 11:14:52,066 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:17:45] 2025-10-12 11:14:52,068 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:17:45] 2025-10-12 11:14:52,071 [wrapper] pilotpid: 2803262
[2025-10-12 13:17:45] 2025-10-12 11:14:52,073 [wrapper] Pilot exit status: 0
[2025-10-12 13:17:45] 2025-10-12 11:14:52,081 [wrapper] pandaids: 6837785311
[2025-10-12 13:17:45] 2025-10-12 11:14:52,150 [wrapper] cleanup supervisor_pilot 3037523 2803263
[2025-10-12 13:17:45] 2025-10-12 11:14:52,152 [wrapper] Test setup, not cleaning
[2025-10-12 13:17:45] 2025-10-12 11:14:52,155 [wrapper] apfmon messages muted
[2025-10-12 13:17:45] 2025-10-12 11:14:52,157 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:17:45] 2025-10-12 11:14:52,160 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:17:45]  *** Error codes and diagnostics ***
[2025-10-12 13:17:45]     "exeErrorCode": 0,
[2025-10-12 13:17:45]     "exeErrorDiag": "",
[2025-10-12 13:17:45]     "pilotErrorCode": 0,
[2025-10-12 13:17:45]     "pilotErrorDiag": "",
[2025-10-12 13:17:45]  *** Listing of results directory ***
[2025-10-12 13:17:45] total 410956
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc    557409 Oct 10 22:48 pilot3.tar.gz
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc      5112 Oct 10 22:50 queuedata.json
[2025-10-12 13:17:45] -rwx------ 1 boinc boinc     36292 Oct 10 22:51 runpilot2-wrapper.sh
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc       100 Oct 12 10:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:17:45] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 10:18 run_atlas
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc       105 Oct 12 10:18 job.xml
[2025-10-12 13:17:45] -rw-r--r-- 2 boinc boinc 219340001 Oct 12 10:18 EVNT.46676267._001826.pool.root.1
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc      6635 Oct 12 10:18 init_data.xml
[2025-10-12 13:17:45] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:18 start_atlas.sh
[2025-10-12 13:17:45] drwxrwx--x 2 boinc boinc      4096 Oct 12 10:18 shared
[2025-10-12 13:17:45] -rw-r--r-- 2 boinc boinc    569682 Oct 12 10:18 input.tar.gz
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc         0 Oct 12 10:18 boinc_lockfile
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc      2549 Oct 12 10:18 pandaJob.out
[2025-10-12 13:17:45] -rw------- 1 boinc boinc    975520 Oct 12 10:18 agis_schedconf.cvmfs.json
[2025-10-12 13:17:45] -rw------- 1 boinc boinc   1560580 Oct 12 10:18 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:17:45] drwx------ 5 boinc boinc      4096 Oct 12 10:18 pilot3
[2025-10-12 13:17:45] -rw------- 1 boinc boinc 193889747 Oct 12 13:13 HITS.46676269._045142.pool.root.1
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc       528 Oct 12 13:13 boinc_task_state.xml
[2025-10-12 13:17:45] -rw------- 1 boinc boinc        95 Oct 12 13:13 pilot_heartbeat.json
[2025-10-12 13:17:45] -rw------- 1 boinc boinc      1038 Oct 12 13:13 memory_monitor_summary.json
[2025-10-12 13:17:45] -rw------- 1 boinc boinc    343689 Oct 12 13:13 log.46676269._045142.job.log.tgz.1
[2025-10-12 13:17:45] -rw------- 1 boinc boinc      7831 Oct 12 13:13 heartbeat.json
[2025-10-12 13:17:45] -rw------- 1 boinc boinc      4905 Oct 12 13:14 pilotlog.txt
[2025-10-12 13:17:45] -rw------- 1 boinc boinc   1498008 Oct 12 13:14 log.46676269._045142.job.log.1
[2025-10-12 13:17:45] -rw------- 1 boinc boinc       357 Oct 12 13:14 output.list
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:14 runtime_log
[2025-10-12 13:17:45] -rw------- 1 boinc boinc   1863680 Oct 12 13:14 result.tar.gz
[2025-10-12 13:17:45] -rw------- 1 boinc boinc       665 Oct 12 13:14 we1KDmnGZR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3QeNDmJYMfKn.diag
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc      9070 Oct 12 13:14 runtime_log.err
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc        26 Oct 12 13:17 wrapper_checkpoint.txt
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:17 boinc_mmap_file
[2025-10-12 13:17:45] -rw-r--r-- 1 boinc boinc     20962 Oct 12 13:17 stderr.txt
[2025-10-12 13:17:45] HITS file was successfully produced:
[2025-10-12 13:17:45] -rw------- 1 boinc boinc 193889747 Oct 12 13:13 shared/HITS.pool.root.1
[2025-10-12 13:17:45]  *** Contents of shared directory: ***
[2025-10-12 13:17:45] total 405952
[2025-10-12 13:17:45] -rw-r--r-- 2 boinc boinc 219340001 Oct 12 10:18 ATLAS.root_0
[2025-10-12 13:17:45] -rw-r--r-- 2 boinc boinc     15120 Oct 12 10:18 start_atlas.sh
[2025-10-12 13:17:45] -rw-r--r-- 2 boinc boinc    569682 Oct 12 10:18 input.tar.gz
[2025-10-12 13:17:45] -rw------- 1 boinc boinc 193889747 Oct 12 13:13 HITS.pool.root.1
[2025-10-12 13:17:45] -rw------- 1 boinc boinc   1863680 Oct 12 13:14 result.tar.gz
13:17:47 (2790407): run_atlas exited; CPU time 40866.138145
13:17:47 (2790407): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN