Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:36:40 (3223642): wrapper (7.7.26015): starting
22:36:40 (3223642): wrapper: running run_atlas (--nthreads 8)
[2025-10-10 22:36:40] Arguments: --nthreads 8
[2025-10-10 22:36:40] Threads: 8
[2025-10-10 22:36:40] Checking for CVMFS
[2025-10-10 22:36:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-10 22:36:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-10 22:36:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-10 22:36:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-10 22:36:42] 2.13.2.0 970182 136058 256416 151569 0 107 23712989 32935936 26861 16776704 0 89806752 99.642 86299064 30619 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-10 22:36:42] CVMFS is ok
[2025-10-10 22:36:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 22:36:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 22:36:42] Further information can be found at the LHC@home message board.
[2025-10-10 22:36:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 22:36:42] Checking for apptainer binary...
[2025-10-10 22:36:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-10 22:36:42] Running /usr/bin/apptainer --version
[2025-10-10 22:36:42] apptainer version 1.4.3-1.el9
[2025-10-10 22:36:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 22:36:43] c-8-37.aglt2.org
[2025-10-10 22:36:43] apptainer works
[2025-10-10 22:36:43] Set ATHENA_PROC_NUMBER=8
[2025-10-10 22:36:43] Set ATHENA_CORE_NUMBER=8
[2025-10-10 22:36:43] Starting ATLAS job with PandaID=6837732295
[2025-10-10 22:36:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 10:04:11]  *** The last 200 lines of the pilot log: ***
[2025-10-11 10:04:11] 2025-10-11 10:21:37,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-11 10:04:11] 2025-10-11 10:21:37,188 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-11 10:04:11] 2025-10-11 10:21:37,196 | INFO     | fitting pss+swap vs Time
[2025-10-11 10:04:11] 2025-10-11 10:21:37,198 | INFO     | sum of square deviations: 29019131545.1476
[2025-10-11 10:04:11] 2025-10-11 10:21:37,203 | INFO     | sum of deviations: 83739212585.54852
[2025-10-11 10:04:11] 2025-10-11 10:21:37,204 | INFO     | mean x: 1760164194.9361234
[2025-10-11 10:04:11] 2025-10-11 10:21:37,204 | INFO     | mean y: 2097003.7775330397
[2025-10-11 10:04:11] 2025-10-11 10:21:37,204 | INFO     | -- intersect: -5077130245.870238
[2025-10-11 10:04:11] 2025-10-11 10:21:37,204 | INFO     | intersect: -5077130245.870238
[2025-10-11 10:04:11] 2025-10-11 10:21:37,205 | INFO     | chi2: 3.3685881095845187
[2025-10-11 10:04:11] 2025-10-11 10:21:37,206 | INFO     | sum of square deviations: 28070850691.897587
[2025-10-11 10:04:11] 2025-10-11 10:21:37,212 | INFO     | sum of deviations: 82220846409.66817
[2025-10-11 10:04:11] 2025-10-11 10:21:37,212 | INFO     | mean x: 1760164042.4276168
[2025-10-11 10:04:11] 2025-10-11 10:21:37,212 | INFO     | mean y: 2096757.5590200445
[2025-10-11 10:04:11] 2025-10-11 10:21:37,213 | INFO     | -- intersect: -5153506789.220365
[2025-10-11 10:04:11] 2025-10-11 10:21:37,213 | INFO     | intersect: -5153506789.220365
[2025-10-11 10:04:11] 2025-10-11 10:21:37,213 | INFO     | chi2: 3.36798631566293
[2025-10-11 10:04:11] 2025-10-11 10:21:37,214 | INFO     | current chi2=3.36798631566293 (change=0.017864871038292953 %)
[2025-10-11 10:04:11] 2025-10-11 10:21:37,214 | INFO     | right removable region: 448
[2025-10-11 10:04:11] 2025-10-11 10:21:37,214 | INFO     | sum of square deviations: 28070618267.64366
[2025-10-11 10:04:11] 2025-10-11 10:21:37,221 | INFO     | sum of deviations: -8145741147.612507
[2025-10-11 10:04:11] 2025-10-11 10:21:37,221 | INFO     | mean x: 1760164347.4632516
[2025-10-11 10:04:11] 2025-10-11 10:21:37,221 | INFO     | mean y: 2111751.2962138085
[2025-10-11 10:04:11] 2025-10-11 10:21:37,221 | INFO     | -- intersect: 512889355.6576688
[2025-10-11 10:04:11] 2025-10-11 10:21:37,222 | INFO     | intersect: 512889355.6576688
[2025-10-11 10:04:11] 2025-10-11 10:21:37,222 | INFO     | chi2: 1.0548853533563003
[2025-10-11 10:04:11] 2025-10-11 10:21:37,222 | INFO     | current chi2=1.0548853533563003 (change=68.6846441583382 %)
[2025-10-11 10:04:11] 2025-10-11 10:21:37,223 | INFO     | sum of square deviations: 27143125942.817337
[2025-10-11 10:04:11] 2025-10-11 10:21:37,229 | INFO     | sum of deviations: -39893716129.60138
[2025-10-11 10:04:11] 2025-10-11 10:21:37,230 | INFO     | mean x: 1760164499.9797297
[2025-10-11 10:04:11] 2025-10-11 10:21:37,230 | INFO     | mean y: 2116968.488738739
[2025-10-11 10:04:11] 2025-10-11 10:21:37,230 | INFO     | -- intersect: 2589125666.43772
[2025-10-11 10:04:11] 2025-10-11 10:21:37,230 | INFO     | intersect: 2589125666.43772
[2025-10-11 10:04:11] 2025-10-11 10:21:37,231 | INFO     | chi2: 0.7842574989792949
[2025-10-11 10:04:11] 2025-10-11 10:21:37,231 | INFO     | current chi2=0.7842574989792949 (change=25.65471721793805 %)
[2025-10-11 10:04:11] 2025-10-11 10:21:37,232 | INFO     | sum of square deviations: 26236203661.74479
[2025-10-11 10:04:11] 2025-10-11 10:21:37,238 | INFO     | sum of deviations: -36789060033.91801
[2025-10-11 10:04:11] 2025-10-11 10:21:37,239 | INFO     | mean x: 1760164652.5034168
[2025-10-11 10:04:11] 2025-10-11 10:21:37,239 | INFO     | mean y: 2116435.945330296
[2025-10-11 10:04:11] 2025-10-11 10:21:37,239 | INFO     | -- intersect: 2470263272.4843416
[2025-10-11 10:04:11] 2025-10-11 10:21:37,239 | INFO     | intersect: 2470263272.4843416
[2025-10-11 10:04:11] 2025-10-11 10:21:37,240 | INFO     | chi2: 0.7541132776291913
[2025-10-11 10:04:11] 2025-10-11 10:21:37,240 | INFO     | current chi2=0.7541132776291913 (change=3.843663769786837 %)
[2025-10-11 10:04:11] 2025-10-11 10:21:37,240 | INFO     | left removable region: 30
[2025-10-11 10:04:11] 2025-10-11 10:21:37,241 | INFO     | sum of square deviations: 22648312544.0
[2025-10-11 10:04:11] 2025-10-11 10:21:37,254 | INFO     | sum of deviations: 25508515481.999996
[2025-10-11 10:04:11] 2025-10-11 10:21:37,254 | INFO     | mean x: 1760164927.0
[2025-10-11 10:04:11] 2025-10-11 10:21:37,262 | INFO     | mean y: 2105115.2440191386
[2025-10-11 10:04:11] 2025-10-11 10:21:37,262 | INFO     | -- intersect: -1980346963.8689394
[2025-10-11 10:04:11] 2025-10-11 10:21:37,263 | INFO     | intersect: -1980346963.8689394
[2025-10-11 10:04:11] 2025-10-11 10:21:37,263 | INFO     | chi2: 0.4279246702235488
[2025-10-11 10:04:11] 2025-10-11 10:21:37,264 | INFO     | -- intersect: -1980346963.8689394
[2025-10-11 10:04:11] 2025-10-11 10:21:37,264 | INFO     | current memory leak: 1.13 B/s (using 418 data points, chi2=0.43)
[2025-10-11 10:04:11] 2025-10-11 10:21:37,264 | INFO     | could have reported an average CPU frequency of 2601 MHz (18 samples)
[2025-10-11 10:04:11] 2025-10-11 10:21:37,265 | INFO     | ..............................
[2025-10-11 10:04:11] 2025-10-11 10:21:37,265 | INFO     | . Timing measurements:
[2025-10-11 10:04:11] 2025-10-11 10:21:37,265 | INFO     | . get job = 0 s
[2025-10-11 10:04:11] 2025-10-11 10:21:37,265 | INFO     | . initial setup = 4 s
[2025-10-11 10:04:11] 2025-10-11 10:21:37,265 | INFO     | . payload setup = 33 s
[2025-10-11 10:04:11] 2025-10-11 10:21:37,265 | INFO     | . stage-in = 0 s
[2025-10-11 10:04:11] 2025-10-11 10:21:37,265 | INFO     | . payload execution = 27713 s
[2025-10-11 10:04:11] 2025-10-11 10:21:37,265 | INFO     | . stage-out = 4 s
[2025-10-11 10:04:11] 2025-10-11 10:21:37,265 | INFO     | . log creation = 0 s
[2025-10-11 10:04:11] 2025-10-11 10:21:37,265 | INFO     | ..............................
[2025-10-11 10:04:11] 2025-10-11 10:21:37,510 | INFO     | 
[2025-10-11 10:04:11] 2025-10-11 10:21:37,510 | INFO     | job summary report
[2025-10-11 10:04:11] 2025-10-11 10:21:37,510 | INFO     | --------------------------------------------------
[2025-10-11 10:04:11] 2025-10-11 10:21:37,510 | INFO     | PanDA job id: 6837732295
[2025-10-11 10:04:11] 2025-10-11 10:21:37,510 | INFO     | task id: 46676269
[2025-10-11 10:04:11] 2025-10-11 10:21:37,510 | INFO     | errors: (none)
[2025-10-11 10:04:11] 2025-10-11 10:21:37,511 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-11 10:04:11] 2025-10-11 10:21:37,511 | INFO     | pilot state: finished 
[2025-10-11 10:04:11] 2025-10-11 10:21:37,511 | INFO     | transexitcode: 0
[2025-10-11 10:04:11] 2025-10-11 10:21:37,511 | INFO     | exeerrorcode: 0
[2025-10-11 10:04:11] 2025-10-11 10:21:37,511 | INFO     | exeerrordiag: 
[2025-10-11 10:04:11] 2025-10-11 10:21:37,511 | INFO     | exitcode: 0
[2025-10-11 10:04:11] 2025-10-11 10:21:37,511 | INFO     | exitmsg: OK
[2025-10-11 10:04:11] 2025-10-11 10:21:37,511 | INFO     | cpuconsumptiontime: 49056 s
[2025-10-11 10:04:11] 2025-10-11 10:21:37,511 | INFO     | nevents: 400
[2025-10-11 10:04:11] 2025-10-11 10:21:37,511 | INFO     | neventsw: 0
[2025-10-11 10:04:11] 2025-10-11 10:21:37,512 | INFO     | pid: 3244628
[2025-10-11 10:04:11] 2025-10-11 10:21:37,512 | INFO     | pgrp: 3244628
[2025-10-11 10:04:11] 2025-10-11 10:21:37,512 | INFO     | corecount: 8
[2025-10-11 10:04:11] 2025-10-11 10:21:37,512 | INFO     | event service: False
[2025-10-11 10:04:11] 2025-10-11 10:21:37,512 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348742, 3: 2348941, 14: 2348941, 26: 2348969, 31: 2349387, 37: 2349415, 27751: 2385657, 27756: 2394655, 27757: 2394711, 27775: 
[2025-10-11 10:04:11] 2025-10-11 10:21:37,512 | INFO     | --------------------------------------------------
[2025-10-11 10:04:11] 2025-10-11 10:21:37,512 | INFO     | 
[2025-10-11 10:04:11] 2025-10-11 10:21:37,512 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-11 10:04:11] 2025-10-11 10:21:37,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,536 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,537 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-11 10:04:11] 2025-10-11 10:21:37,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,537 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-11 10:04:11] 2025-10-11 10:21:37,537 | INFO     | job 6837732295 has completed (purged errors)
[2025-10-11 10:04:11] 2025-10-11 10:21:37,538 | INFO     | overall cleanup function is called
[2025-10-11 10:04:11] 2025-10-11 10:21:38,553 | INFO     | --- collectZombieJob: --- 10, [3244628]
[2025-10-11 10:04:11] 2025-10-11 10:21:38,553 | INFO     | zombie collector waiting for pid 3244628
[2025-10-11 10:04:11] 2025-10-11 10:21:38,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-11 10:04:11] 2025-10-11 10:21:38,553 | INFO     | collected zombie processes
[2025-10-11 10:04:11] 2025-10-11 10:21:38,553 | INFO     | will attempt to kill all subprocesses of pid=3244628
[2025-10-11 10:04:11] 2025-10-11 10:21:39,520 | INFO     | process IDs to be killed: [3244628] (in reverse order)
[2025-10-11 10:04:11] 2025-10-11 10:21:40,303 | WARNING  | found no corresponding commands to process id(s)
[2025-10-11 10:04:11] 2025-10-11 10:21:40,303 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-11 10:04:11] 2025-10-11 10:21:40,320 | INFO     | did not find any defunct processes belonging to 3244628
[2025-10-11 10:04:11] 2025-10-11 10:21:40,417 | INFO     | did not find any defunct processes belonging to 3244628
[2025-10-11 10:04:11] 2025-10-11 10:21:40,417 | INFO     | ready for new job
[2025-10-11 10:04:11] 2025-10-11 10:21:40,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-11 10:04:11] 2025-10-11 10:21:40,420 | INFO     | ***************************************
[2025-10-11 10:04:11] 2025-10-11 10:21:40,420 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-11 10:04:11] 2025-10-11 10:21:40,421 | INFO     | ***************************************
[2025-10-11 10:04:11] 2025-10-11 10:21:40,421 | INFO     | 
[2025-10-11 10:04:11] 2025-10-11 10:21:40,446 | INFO     | architecture information:
[2025-10-11 10:04:11] 2025-10-11 10:21:40,470 | INFO     | executing command: cat /etc/os-release
[2025-10-11 10:04:11] 2025-10-11 10:21:40,550 | INFO     | cat /etc/os-release:
[2025-10-11 10:04:11] NAME="CentOS Linux"
[2025-10-11 10:04:11] VERSION="7 (Core)"
[2025-10-11 10:04:11] ID="centos"
[2025-10-11 10:04:11] ID_LIKE="rhel fedora"
[2025-10-11 10:04:11] VERSION_ID="7"
[2025-10-11 10:04:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-11 10:04:11] ANSI_COLOR="0;31"
[2025-10-11 10:04:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-11 10:04:11] HOME_URL="https://www.centos.org/"
[2025-10-11 10:04:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-11 10:04:11] 
[2025-10-11 10:04:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-11 10:04:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-11 10:04:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-11 10:04:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-11 10:04:11] 
[2025-10-11 10:04:11] 2025-10-11 10:21:40,550 | INFO     | ***************************************
[2025-10-11 10:04:11] 2025-10-11 10:21:41,054 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-11 10:04:11] 2025-10-11 10:21:41,204 | INFO     | sufficient remaining disk space (74713137152 B)
[2025-10-11 10:04:11] 2025-10-11 10:21:41,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 10:04:11] 2025-10-11 10:21:41,205 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 10:04:11] 2025-10-11 10:21:41,205 | INFO     | update_server=False
[2025-10-11 10:04:11] 2025-10-11 10:21:41,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 10:04:11] 2025-10-11 10:21:41,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 10:04:11] 2025-10-11 10:21:41,222 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:04:11] 2025-10-11 10:21:41,222 | INFO     | aborting loop
[2025-10-11 10:04:11] 2025-10-11 10:21:41,822 | INFO     | all payload control threads have been joined
[2025-10-11 10:04:11] 2025-10-11 10:21:41,945 | INFO     | all data control threads have been joined
[2025-10-11 10:04:11] 2025-10-11 10:21:42,213 | INFO     | [job] retrieve thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:42,227 | INFO     | [job] job monitor thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:42,289 | INFO     | [job] validate thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:42,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 10:04:11] 2025-10-11 10:21:42,534 | INFO     | all job control threads have been joined
[2025-10-11 10:04:11] 2025-10-11 10:21:42,592 | INFO     | [payload] failed_post thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:42,668 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:42,771 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:42,808 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:42,828 | INFO     | [payload] control thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:42,951 | INFO     | [data] control thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:43,214 | INFO     | [data] copytool_out thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:43,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 10:04:11] 2025-10-11 10:21:43,465 | INFO     | [payload] validate_post thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:43,534 | INFO     | [job] queue monitor thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:43,541 | INFO     | [job] control thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:43,632 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:43,643 | INFO     | [data] copytool_in thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:21:47,272 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 10:04:11] 2025-10-11 10:22:09,728 | INFO     | PID=3229280 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 10:04:11] 2025-10-11 10:22:09,729 | INFO     | .. there are 39 such processes running
[2025-10-11 10:04:11] 2025-10-11 10:22:09,729 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 10:04:11] 2025-10-11 10:22:09,729 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 10:04:11] 2025-10-11 10:22:09,729 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 10:04:11] 2025-10-11 10:22:38,064 [wrapper] supervise_pilot (15 min periods counter: 32)
[2025-10-11 10:04:11] 2025-10-11 10:22:39,973 | INFO     | [monitor] cgroup control has ended
[2025-10-11 10:04:11] 2025-10-11 10:22:40,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400162137920)>', '<ExcThread(monitor, started 140399385503488)>']
[2025-10-11 10:04:11] 2025-10-11 10:22:41,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 10:04:11] 2025-10-11 10:22:41,949 | INFO     | [monitor] control thread has ended
[2025-10-11 10:04:11] 2025-10-11 10:22:46,007 | INFO     | all workflow threads have been joined
[2025-10-11 10:04:11] 2025-10-11 10:22:46,007 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 10:04:11] 2025-10-11 10:22:46,007 | INFO     | traces error code: 0
[2025-10-11 10:04:11] 2025-10-11 10:22:46,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 10:04:11] 2025-10-11 10:22:46,408 [wrapper] ==== pilot stdout END ====
[2025-10-11 10:04:11] 2025-10-11 10:22:46,411 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 10:04:11] 2025-10-11 10:22:46,414 [wrapper] pilotpid: 3229280
[2025-10-11 10:04:11] 2025-10-11 10:22:46,416 [wrapper] Pilot exit status: 0
[2025-10-11 10:04:11] 2025-10-11 10:22:46,432 [wrapper] pandaids: 6837732295
[2025-10-11 10:04:11] 2025-10-11 10:22:46,526 [wrapper] cleanup supervisor_pilot  737825 3229281
[2025-10-11 10:04:11] 2025-10-11 10:22:46,529 [wrapper] Test setup, not cleaning
[2025-10-11 10:04:11] 2025-10-11 10:22:46,532 [wrapper] apfmon messages muted
[2025-10-11 10:04:11] 2025-10-11 10:22:46,534 [wrapper] ==== wrapper stdout END ====
[2025-10-11 10:04:11] 2025-10-11 10:22:46,538 [wrapper] ==== wrapper stderr END ====
[2025-10-11 10:04:11]  *** Error codes and diagnostics ***
[2025-10-11 10:04:11]     "exeErrorCode": 0,
[2025-10-11 10:04:11]     "exeErrorDiag": "",
[2025-10-11 10:04:11]     "pilotErrorCode": 0,
[2025-10-11 10:04:11]     "pilotErrorDiag": "",
[2025-10-11 10:04:11]  *** Listing of results directory ***
[2025-10-11 10:04:11] total 411356
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 16:24 pilot3.tar.gz
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 16:30 queuedata.json
[2025-10-11 10:04:11] -rwx------. 1 boincer umatlas     36292 Oct 10 16:31 runpilot2-wrapper.sh
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas       100 Oct 10 22:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 10:04:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 10 22:36 run_atlas
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas       105 Oct 10 22:36 job.xml
[2025-10-11 10:04:11] -rw-r--r--. 2 boincer umatlas 220106452 Oct 10 22:36 EVNT.46676267._001803.pool.root.1
[2025-10-11 10:04:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 22:36 start_atlas.sh
[2025-10-11 10:04:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 10 22:36 shared
[2025-10-11 10:04:11] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 22:36 input.tar.gz
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas         0 Oct 10 22:36 boinc_lockfile
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas      2550 Oct 10 22:36 pandaJob.out
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas    975509 Oct 10 22:37 agis_schedconf.cvmfs.json
[2025-10-11 10:04:11] drwx------. 5 boincer umatlas      4096 Oct 10 22:37 pilot3
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas 190013093 Oct 11 06:20 HITS.46676269._044547.pool.root.1
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas       530 Oct 11 06:20 boinc_task_state.xml
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas      1043 Oct 11 06:21 memory_monitor_summary.json
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas   1560580 Oct 11 06:21 agis_ddmendpoints.agis.ALL.json
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas    587026 Oct 11 06:21 log.46676269._044547.job.log.tgz.1
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas        95 Oct 11 06:21 pilot_heartbeat.json
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas      7822 Oct 11 06:21 heartbeat.json
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas      4824 Oct 11 06:22 pilotlog.txt
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas   3017608 Oct 11 06:22 log.46676269._044547.job.log.1
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas       357 Oct 11 06:22 output.list
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas       620 Oct 11 06:22 runtime_log
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas   3624960 Oct 11 06:22 result.tar.gz
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas      8694 Oct 11 06:22 runtime_log.err
[2025-10-11 10:04:11] -rw-------. 1 boincer umatlas       657 Oct 11 06:22 KnPMDmswYR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsLeNDmyet04n.diag
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas      6659 Oct 11 10:04 init_data.xml
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 11 10:04 boinc_mmap_file
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas        27 Oct 11 10:04 wrapper_checkpoint.txt
[2025-10-11 10:04:11] -rw-r--r--. 1 boincer umatlas     21014 Oct 11 10:04 stderr.txt
[2025-10-11 10:04:12] HITS file was successfully produced:
[2025-10-11 10:04:12] -rw-------. 1 boincer umatlas 190013093 Oct 11 06:20 shared/HITS.pool.root.1
[2025-10-11 10:04:12]  *** Contents of shared directory: ***
[2025-10-11 10:04:12] total 404628
[2025-10-11 10:04:12] -rw-r--r--. 2 boincer umatlas 220106452 Oct 10 22:36 ATLAS.root_0
[2025-10-11 10:04:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 10 22:36 start_atlas.sh
[2025-10-11 10:04:12] -rw-r--r--. 2 boincer umatlas    569683 Oct 10 22:36 input.tar.gz
[2025-10-11 10:04:12] -rw-------. 1 boincer umatlas 190013093 Oct 11 06:20 HITS.pool.root.1
[2025-10-11 10:04:12] -rw-------. 1 boincer umatlas   3624960 Oct 11 06:22 result.tar.gz
10:04:13 (3223642): run_atlas exited; CPU time 50054.257197
10:04:13 (3223642): called boinc_finish(0)

</stderr_txt>
]]>

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