Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:39:22 (1565641): wrapper (7.7.26015): starting
05:39:22 (1565641): wrapper: running run_atlas (--nthreads 3)
[2025-10-11 05:39:22] Arguments: --nthreads 3
[2025-10-11 05:39:22] Threads: 3
[2025-10-11 05:39:22] Checking for CVMFS
[2025-10-11 05:39:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 05:39:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 05:39:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 05:39:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 05:39:22] 2.9.2.0 842304 2365 79892 151571 0 57 2271154 36864000 0 130560 0 1903511 99.991 80068 1008 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 05:39:22] CVMFS is ok
[2025-10-11 05:39:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 05:39:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 05:39:22] Further information can be found at the LHC@home message board.
[2025-10-11 05:39:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 05:39:22] Checking for apptainer binary...
[2025-10-11 05:39:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 05:39:22] Running /usr/bin/apptainer --version
[2025-10-11 05:39:22] apptainer version 1.4.1-1.1
[2025-10-11 05:39:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 05:39:22] thA330a
[2025-10-11 05:39:22] apptainer works
[2025-10-11 05:39:22] Set ATHENA_PROC_NUMBER=3
[2025-10-11 05:39:22] Set ATHENA_CORE_NUMBER=3
[2025-10-11 05:39:22] Starting ATLAS job with PandaID=6837630810
[2025-10-11 05:39:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 06:59:40]  *** The last 200 lines of the pilot log: ***
[2025-10-11 06:59:40] 2025-10-11 04:58:35,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-11 06:59:40] 2025-10-11 04:58:35,153 | INFO     | current server update state: UPDATING_FINAL
[2025-10-11 06:59:40] 2025-10-11 04:58:35,153 | INFO     | update_server=False
[2025-10-11 06:59:40] 2025-10-11 04:58:35,153 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-11 06:59:40] 2025-10-11 04:58:35,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-11 06:59:40] 2025-10-11 04:58:35,153 | INFO     | aborting loop
[2025-10-11 06:59:40] 2025-10-11 04:58:35,194 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 06:59:40] 2025-10-11 04:58:35,196 | INFO     | all payload control threads have been joined
[2025-10-11 06:59:40] 2025-10-11 04:58:35,610 | INFO     | all data control threads have been joined
[2025-10-11 06:59:40] 2025-10-11 04:58:36,101 | INFO     | all job control threads have been joined
[2025-10-11 06:59:40] 2025-10-11 04:58:36,154 | INFO     | [job] job monitor thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:36,158 | INFO     | [job] retrieve thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:36,181 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:36,202 | INFO     | [payload] control thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:36,314 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:36,616 | INFO     | [data] control thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:37,066 | INFO     | [data] copytool_in thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:37,107 | INFO     | [job] control thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:37,186 | INFO     | [payload] failed_post thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:37,199 | INFO     | [data] copytool_out thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:37,517 | INFO     | [job] validate thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:37,586 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:37,611 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:37,648 | INFO     | [payload] validate_post thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:37,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-11 06:59:40] 2025-10-11 04:58:38,109 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-11 06:59:40] 2025-10-11 04:58:39,115 | INFO     | [job] queue monitor thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:58:41,940 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 06:59:40] 2025-10-11 04:59:04,717 | INFO     | PID=1569353 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 06:59:40] 2025-10-11 04:59:04,718 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 06:59:40] 2025-10-11 04:59:04,718 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 06:59:40] 2025-10-11 04:59:04,718 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 06:59:40] 2025-10-11 04:59:33,608 | INFO     | [monitor] cgroup control has ended
[2025-10-11 06:59:40] 2025-10-11 04:59:35,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140449574147904)>', '<ExcThread(monitor, started 140449222211328)>']
[2025-10-11 06:59:40] 2025-10-11 04:59:35,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 06:59:40] 2025-10-11 04:59:35,875 | INFO     | [monitor] control thread has ended
[2025-10-11 06:59:40] 2025-10-11 04:59:40,635 | INFO     | all workflow threads have been joined
[2025-10-11 06:59:40] 2025-10-11 04:59:40,636 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 06:59:40] 2025-10-11 04:59:40,636 | INFO     | traces error code: 0
[2025-10-11 06:59:40] 2025-10-11 04:59:40,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 06:59:40] 2025-10-11 04:59:40,686 [wrapper] ==== pilot stdout END ====
[2025-10-11 06:59:40] 2025-10-11 04:59:40,689 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 06:59:40] 2025-10-11 04:59:40,691 [wrapper] pilotpid: 1569353
[2025-10-11 06:59:40] 2025-10-11 04:59:40,693 [wrapper] Pilot exit status: 0
[2025-10-11 06:59:40] 2025-10-11 04:59:40,700 [wrapper] pandaids: 6837630810
[2025-10-11 06:59:40] 2025-10-11 04:59:40,718 [wrapper] cleanup supervisor_pilot 1587930 1569354
[2025-10-11 06:59:40] 2025-10-11 04:59:40,720 [wrapper] Test setup, not cleaning
[2025-10-11 06:59:40] 2025-10-11 04:59:40,722 [wrapper] apfmon messages muted
[2025-10-11 06:59:40] 2025-10-11 04:59:40,725 [wrapper] ==== wrapper stdout END ====
[2025-10-11 06:59:40] 2025-10-11 04:59:40,727 [wrapper] ==== wrapper stderr END ====
[2025-10-11 06:59:40]  *** Error codes and diagnostics ***
[2025-10-11 06:59:40]     "exeErrorCode": 0,
[2025-10-11 06:59:40]     "exeErrorDiag": "",
[2025-10-11 06:59:40]     "pilotErrorCode": 0,
[2025-10-11 06:59:40]     "pilotErrorDiag": "",
[2025-10-11 06:59:40]  *** Listing of results directory ***
[2025-10-11 06:59:40] total 402016
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc    557409 Oct 10 15:43 pilot3.tar.gz
[2025-10-11 06:59:40] -rwx------ 1 boinc boinc     36292 Oct 10 15:48 runpilot2-wrapper.sh
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc      5112 Oct 10 15:48 queuedata.json
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc       100 Oct 11 05:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 06:59:40] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 05:39 run_atlas
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc       105 Oct 11 05:39 job.xml
[2025-10-11 06:59:40] -rw-r--r-- 2 boinc boinc 221172488 Oct 11 05:39 EVNT.46676267._001599.pool.root.1
[2025-10-11 06:59:40] -rw-r--r-- 2 boinc boinc    569679 Oct 11 05:39 input.tar.gz
[2025-10-11 06:59:40] -rw-r--r-- 2 boinc boinc     15120 Oct 11 05:39 start_atlas.sh
[2025-10-11 06:59:40] drwxrwx--x 2 boinc boinc      4096 Oct 11 05:39 shared
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc         0 Oct 11 05:39 boinc_setup_complete
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc      6439 Oct 11 05:39 init_data.xml
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc         0 Oct 11 05:39 boinc_lockfile
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc      2550 Oct 11 05:39 pandaJob.out
[2025-10-11 06:59:40] -rw------- 1 boinc boinc    975509 Oct 11 05:39 agis_schedconf.cvmfs.json
[2025-10-11 06:59:40] -rw------- 1 boinc boinc   1560580 Oct 11 05:39 agis_ddmendpoints.agis.ALL.json
[2025-10-11 06:59:40] drwx------ 5 boinc boinc      4096 Oct 11 05:39 pilot3
[2025-10-11 06:59:40] -rw------- 1 boinc boinc 184696771 Oct 11 06:58 HITS.46676269._039407.pool.root.1
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc       529 Oct 11 06:58 boinc_task_state.xml
[2025-10-11 06:59:40] -rw------- 1 boinc boinc      1033 Oct 11 06:58 memory_monitor_summary.json
[2025-10-11 06:59:40] -rw------- 1 boinc boinc    250270 Oct 11 06:58 log.46676269._039407.job.log.tgz.1
[2025-10-11 06:59:40] -rw------- 1 boinc boinc      7766 Oct 11 06:58 heartbeat.json
[2025-10-11 06:59:40] -rw------- 1 boinc boinc        95 Oct 11 06:59 pilot_heartbeat.json
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc        27 Oct 11 06:59 wrapper_checkpoint.txt
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc      8192 Oct 11 06:59 boinc_mmap_file
[2025-10-11 06:59:40] -rw------- 1 boinc boinc      4752 Oct 11 06:59 pilotlog.txt
[2025-10-11 06:59:40] -rw------- 1 boinc boinc    699595 Oct 11 06:59 log.46676269._039407.job.log.1
[2025-10-11 06:59:40] -rw------- 1 boinc boinc       357 Oct 11 06:59 output.list
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc       620 Oct 11 06:59 runtime_log
[2025-10-11 06:59:40] -rw------- 1 boinc boinc    972800 Oct 11 06:59 result.tar.gz
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc      8782 Oct 11 06:59 runtime_log.err
[2025-10-11 06:59:40] -rw------- 1 boinc boinc       659 Oct 11 06:59 56tNDmueSR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmL2PMDmyGEvjm.diag
[2025-10-11 06:59:40] -rw-r--r-- 1 boinc boinc      7642 Oct 11 06:59 stderr.txt
[2025-10-11 06:59:40] HITS file was successfully produced:
[2025-10-11 06:59:40] -rw------- 1 boinc boinc 184696771 Oct 11 06:58 shared/HITS.pool.root.1
[2025-10-11 06:59:40]  *** Contents of shared directory: ***
[2025-10-11 06:59:40] total 397896
[2025-10-11 06:59:40] -rw-r--r-- 2 boinc boinc 221172488 Oct 11 05:39 ATLAS.root_0
[2025-10-11 06:59:40] -rw-r--r-- 2 boinc boinc    569679 Oct 11 05:39 input.tar.gz
[2025-10-11 06:59:40] -rw-r--r-- 2 boinc boinc     15120 Oct 11 05:39 start_atlas.sh
[2025-10-11 06:59:40] -rw------- 1 boinc boinc 184696771 Oct 11 06:58 HITS.pool.root.1
[2025-10-11 06:59:40] -rw------- 1 boinc boinc    972800 Oct 11 06:59 result.tar.gz
06:59:42 (1565641): run_atlas exited; CPU time 13480.738009
06:59:42 (1565641): called boinc_finish(0)

</stderr_txt>
]]>

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