Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:19:54 (2376423): wrapper (7.7.26015): starting
14:19:54 (2376423): wrapper: running run_atlas (--nthreads 3)
[2025-10-11 14:19:54] Arguments: --nthreads 3
[2025-10-11 14:19:54] Threads: 3
[2025-10-11 14:19:54] Checking for CVMFS
[2025-10-11 14:19:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-11 14:19:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-11 14:19:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-11 14:19:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-11 14:19:55] 2.9.2.0 1544458 2929 70184 151584 1 56 30517374 36864001 0 130560 0 2173064 99.990 98594 1118 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-11 14:19:55] CVMFS is ok
[2025-10-11 14:19:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-11 14:19:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-11 14:19:55] Further information can be found at the LHC@home message board.
[2025-10-11 14:19:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-11 14:19:55] Checking for apptainer binary...
[2025-10-11 14:19:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-11 14:19:55] Running /usr/bin/apptainer --version
[2025-10-11 14:19:55] apptainer version 1.4.1-1.1
[2025-10-11 14:19:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-11 14:19:55] atlasA223a
[2025-10-11 14:19:55] apptainer works
[2025-10-11 14:19:55] Set ATHENA_PROC_NUMBER=3
[2025-10-11 14:19:55] Set ATHENA_CORE_NUMBER=3
[2025-10-11 14:19:55] Starting ATLAS job with PandaID=6837732767
[2025-10-11 14:19:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-11 15:50:19]  *** The last 200 lines of the pilot log: ***
[2025-10-11 15:50:19] 2025-10-11 13:49:20,352 | INFO     | all data control threads have been joined
[2025-10-11 15:50:19] 2025-10-11 13:49:20,572 | INFO     | [job] retrieve thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:20,573 | INFO     | [job] queue monitor thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:20,574 | INFO     | [job] job monitor thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:20,619 | INFO     | [payload] validate_pre thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:20,626 | INFO     | [payload] validate_post thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:20,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-11 15:50:19] 2025-10-11 13:49:20,707 | INFO     | [payload] failed_post thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:20,727 | INFO     | all payload control threads have been joined
[2025-10-11 15:50:19] 2025-10-11 13:49:20,954 | INFO     | [data] copytool_in thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:20,958 | INFO     | all job control threads have been joined
[2025-10-11 15:50:19] 2025-10-11 13:49:21,267 | INFO     | [payload] execute_payloads thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:21,358 | INFO     | [data] control thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:21,733 | INFO     | [payload] control thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:21,869 | INFO     | [job] create_data_payload thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:21,964 | INFO     | [job] control thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:22,050 | INFO     | [job] validate thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:22,693 | INFO     | [data] copytool_out thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:23,573 | INFO     | [data] queue_monitor thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:29,670 | INFO     | job.realtimelogging is not enabled
[2025-10-11 15:50:19] 2025-10-11 13:49:30,675 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-11 15:50:19] 2025-10-11 13:49:50,018 | INFO     | PID=2380137 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-11 15:50:19] 2025-10-11 13:49:50,019 | INFO     | found 0 job(s) in 20 queues
[2025-10-11 15:50:19] 2025-10-11 13:49:50,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-11 15:50:19] 2025-10-11 13:49:50,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-11 15:50:19] 2025-10-11 13:50:04,396 [wrapper] supervise_pilot (15 min periods counter: 7)
[2025-10-11 15:50:19] 2025-10-11 13:50:13,809 | INFO     | [monitor] cgroup control has ended
[2025-10-11 15:50:19] 2025-10-11 13:50:14,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139775535896384)>', '<ExcThread(monitor, started 139775172388608)>']
[2025-10-11 15:50:19] 2025-10-11 13:50:15,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-11 15:50:19] 2025-10-11 13:50:15,142 | INFO     | [monitor] control thread has ended
[2025-10-11 15:50:19] 2025-10-11 13:50:19,294 | INFO     | all workflow threads have been joined
[2025-10-11 15:50:19] 2025-10-11 13:50:19,295 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-11 15:50:19] 2025-10-11 13:50:19,295 | INFO     | traces error code: 0
[2025-10-11 15:50:19] 2025-10-11 13:50:19,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-11 15:50:19] 2025-10-11 13:50:19,342 [wrapper] ==== pilot stdout END ====
[2025-10-11 15:50:19] 2025-10-11 13:50:19,345 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-11 15:50:19] 2025-10-11 13:50:19,348 [wrapper] pilotpid: 2380137
[2025-10-11 15:50:19] 2025-10-11 13:50:19,351 [wrapper] Pilot exit status: 0
[2025-10-11 15:50:19] 2025-10-11 13:50:19,359 [wrapper] pandaids: 6837732767
[2025-10-11 15:50:19] 2025-10-11 13:50:19,377 [wrapper] cleanup supervisor_pilot 2401117 2380138
[2025-10-11 15:50:19] 2025-10-11 13:50:19,379 [wrapper] Test setup, not cleaning
[2025-10-11 15:50:19] 2025-10-11 13:50:19,382 [wrapper] apfmon messages muted
[2025-10-11 15:50:19] 2025-10-11 13:50:19,384 [wrapper] ==== wrapper stdout END ====
[2025-10-11 15:50:19] 2025-10-11 13:50:19,387 [wrapper] ==== wrapper stderr END ====
[2025-10-11 15:50:19]  *** Error codes and diagnostics ***
[2025-10-11 15:50:19]     "exeErrorCode": 0,
[2025-10-11 15:50:19]     "exeErrorDiag": "",
[2025-10-11 15:50:19]     "pilotErrorCode": 0,
[2025-10-11 15:50:19]     "pilotErrorDiag": "",
[2025-10-11 15:50:19]  *** Listing of results directory ***
[2025-10-11 15:50:19] total 406388
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc    557409 Oct 10 22:32 pilot3.tar.gz
[2025-10-11 15:50:19] -rwx------ 1 boinc boinc     36292 Oct 10 22:34 runpilot2-wrapper.sh
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc      5112 Oct 10 22:34 queuedata.json
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc       100 Oct 11 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-11 15:50:19] -rwxr-xr-x 1 boinc boinc      7986 Oct 11 14:19 run_atlas
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc       105 Oct 11 14:19 job.xml
[2025-10-11 15:50:19] -rw-r--r-- 2 boinc boinc 219611811 Oct 11 14:19 EVNT.46676267._001807.pool.root.1
[2025-10-11 15:50:19] -rw-r--r-- 2 boinc boinc    569677 Oct 11 14:19 input.tar.gz
[2025-10-11 15:50:19] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:19 start_atlas.sh
[2025-10-11 15:50:19] drwxrwx--x 2 boinc boinc      4096 Oct 11 14:19 shared
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:19 boinc_setup_complete
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc      6200 Oct 11 14:19 init_data.xml
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc         0 Oct 11 14:19 boinc_lockfile
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc      2550 Oct 11 14:19 pandaJob.out
[2025-10-11 15:50:19] -rw------- 1 boinc boinc    975504 Oct 11 14:20 agis_schedconf.cvmfs.json
[2025-10-11 15:50:19] -rw------- 1 boinc boinc   1560580 Oct 11 14:20 agis_ddmendpoints.agis.ALL.json
[2025-10-11 15:50:19] drwx------ 5 boinc boinc      4096 Oct 11 14:20 pilot3
[2025-10-11 15:50:19] -rw------- 1 boinc boinc 190529288 Oct 11 15:48 HITS.46676269._044667.pool.root.1
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc       529 Oct 11 15:48 boinc_task_state.xml
[2025-10-11 15:50:19] -rw------- 1 boinc boinc      1029 Oct 11 15:49 memory_monitor_summary.json
[2025-10-11 15:50:19] -rw------- 1 boinc boinc    272374 Oct 11 15:49 log.46676269._044667.job.log.tgz.1
[2025-10-11 15:50:19] -rw------- 1 boinc boinc      7768 Oct 11 15:49 heartbeat.json
[2025-10-11 15:50:19] -rw------- 1 boinc boinc        95 Oct 11 15:49 pilot_heartbeat.json
[2025-10-11 15:50:19] -rw------- 1 boinc boinc      4824 Oct 11 15:50 pilotlog.txt
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc      8192 Oct 11 15:50 boinc_mmap_file
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc        27 Oct 11 15:50 wrapper_checkpoint.txt
[2025-10-11 15:50:19] -rw------- 1 boinc boinc    781929 Oct 11 15:50 log.46676269._044667.job.log.1
[2025-10-11 15:50:19] -rw------- 1 boinc boinc       357 Oct 11 15:50 output.list
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc       620 Oct 11 15:50 runtime_log
[2025-10-11 15:50:19] -rw------- 1 boinc boinc   1075200 Oct 11 15:50 result.tar.gz
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc      8797 Oct 11 15:50 runtime_log.err
[2025-10-11 15:50:19] -rw------- 1 boinc boinc       662 Oct 11 15:50 OLaLDmzzYR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUXQMDmEnBl9n.diag
[2025-10-11 15:50:19] -rw-r--r-- 1 boinc boinc      6930 Oct 11 15:50 stderr.txt
[2025-10-11 15:50:19] HITS file was successfully produced:
[2025-10-11 15:50:19] -rw------- 1 boinc boinc 190529288 Oct 11 15:48 shared/HITS.pool.root.1
[2025-10-11 15:50:19]  *** Contents of shared directory: ***
[2025-10-11 15:50:19] total 402168
[2025-10-11 15:50:19] -rw-r--r-- 2 boinc boinc 219611811 Oct 11 14:19 ATLAS.root_0
[2025-10-11 15:50:19] -rw-r--r-- 2 boinc boinc    569677 Oct 11 14:19 input.tar.gz
[2025-10-11 15:50:19] -rw-r--r-- 2 boinc boinc     15120 Oct 11 14:19 start_atlas.sh
[2025-10-11 15:50:19] -rw------- 1 boinc boinc 190529288 Oct 11 15:48 HITS.pool.root.1
[2025-10-11 15:50:19] -rw------- 1 boinc boinc   1075200 Oct 11 15:50 result.tar.gz
15:50:21 (2376423): run_atlas exited; CPU time 15298.248695
15:50:21 (2376423): called boinc_finish(0)

</stderr_txt>
]]>

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